Checks on Level 2 data before marking as “ready for submission” to
ESS-DIVE
Created October 21, 2022 | Stephanie Pennington
Last ran: 2023-01-17
Checks/formatting we need to do:
- Arrange by Kit ID
- Check file name structure
- Check for duplicate Kit IDs
- Check where each flagged value falls
Are file names in the correct structure?
[Campaign]_[Sample Type]_[Analyte]_Level2.csv
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x
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ec1_sediment_ghg_L2.csv
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ec1_sediment_gwc_L2.csv
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ec1_sediment_loi_L2.csv
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ec1_sediment_oxygendrawdown_L2.csv
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ec1_soil_bd_L2.csv
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ec1_soil_ghg_L2.csv
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ec1_soil_gwc_L2.csv
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ec1_soil_loi_L2.csv
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ec1_soil_oxygendrawdown_L2.csv
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ec1_soil_phcond_L2.csv
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ec1_water_tss_L2.csv
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ec1_water_waterquality_L2.csv
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Are there duplicate kit IDs?
Are there nas in any column?
Have the files passed checks?