library(DoE.base)
## Warning: package 'DoE.base' was built under R version 4.2.2
## Loading required package: grid
## Loading required package: conf.design
## Registered S3 method overwritten by 'DoE.base':
## method from
## factorize.factor conf.design
##
## Attaching package: 'DoE.base'
## The following objects are masked from 'package:stats':
##
## aov, lm
## The following object is masked from 'package:graphics':
##
## plot.design
## The following object is masked from 'package:base':
##
## lengths
A<-c(-1,1,-1,1,-1,1,-1,1,-1,1,-1,1,-1,1,-1,1)
B<-c(-1,-1,1,1,-1,-1,1,1,-1,-1,1,1,-1,-1,1,1)
C<-c(-1,-1,-1,-1,1,1,1,1,-1,-1,-1,-1,1,1,1,1)
D<-c(-1,-1,-1,-1,-1,-1,-1,-1,1,1,1,1,1,1,1,1)
obs<-c(12,18,13,20,17,25,15,25,10,24,13,24,19,21,17,23)
dat<-data.frame(A,B,C,D,obs)
dat
## A B C D obs
## 1 -1 -1 -1 -1 12
## 2 1 -1 -1 -1 18
## 3 -1 1 -1 -1 13
## 4 1 1 -1 -1 20
## 5 -1 -1 1 -1 17
## 6 1 -1 1 -1 25
## 7 -1 1 1 -1 15
## 8 1 1 1 -1 25
## 9 -1 -1 -1 1 10
## 10 1 -1 -1 1 24
## 11 -1 1 -1 1 13
## 12 1 1 -1 1 24
## 13 -1 -1 1 1 19
## 14 1 -1 1 1 21
## 15 -1 1 1 1 17
## 16 1 1 1 1 23
mod<-lm(obs~A*B*C*D,data=dat)
halfnormal(mod)
##
## Significant effects (alpha=0.05, Lenth method):
## [1] A C A:C:D
From the halfnormal plot we can see that Factor A, C and the interaction between A:C:D are significants.
\[ H_0: \mu_a=\mu_b=\mu_c=\mu_d \] \[ Ha: at \; least\; one\; mean \; is \; different \]
model<-aov(obs~A+C+D+A*C*D)
summary(model)
## Df Sum Sq Mean Sq F value Pr(>F)
## A 1 256.00 256.00 157.538 1.52e-06 ***
## C 1 49.00 49.00 30.154 0.00058 ***
## D 1 2.25 2.25 1.385 0.27314
## A:C 1 9.00 9.00 5.538 0.04643 *
## A:D 1 0.25 0.25 0.154 0.70513
## C:D 1 6.25 6.25 3.846 0.08550 .
## A:C:D 1 30.25 30.25 18.615 0.00256 **
## Residuals 8 13.00 1.63
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Performing the ANOVA only with the significant factors, we can see that Factors A, C and the interactions beteen A:C and A:C:D are significant with an alpha of 0.05, confirming the previous halfnormal plot. However, the halfnormal plot did not pointed out the interaction A:C, since is very close to 0.05. Therefore, we can reject the null hypothesis.