#install.packages('GGally')
library(tidyverse)
## Warning: package 'tidyverse' was built under R version 4.2.2
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## ✔ tibble 3.1.8 ✔ dplyr 1.0.9
## ✔ tidyr 1.2.0 ✔ stringr 1.4.1
## ✔ readr 2.1.2 ✔ forcats 0.5.2
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## ✖ dplyr::filter() masks stats::filter()
## ✖ dplyr::lag() masks stats::lag()
library(openintro)
## Loading required package: airports
## Loading required package: cherryblossom
## Loading required package: usdata
library(GGally)
## Warning: package 'GGally' was built under R version 4.2.2
## Registered S3 method overwritten by 'GGally':
## method from
## +.gg ggplot2
glimpse(evals)
## Rows: 463
## Columns: 23
## $ course_id <int> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 1…
## $ prof_id <int> 1, 1, 1, 1, 2, 2, 2, 3, 3, 4, 4, 4, 4, 4, 4, 4, 4, 5, 5,…
## $ score <dbl> 4.7, 4.1, 3.9, 4.8, 4.6, 4.3, 2.8, 4.1, 3.4, 4.5, 3.8, 4…
## $ rank <fct> tenure track, tenure track, tenure track, tenure track, …
## $ ethnicity <fct> minority, minority, minority, minority, not minority, no…
## $ gender <fct> female, female, female, female, male, male, male, male, …
## $ language <fct> english, english, english, english, english, english, en…
## $ age <int> 36, 36, 36, 36, 59, 59, 59, 51, 51, 40, 40, 40, 40, 40, …
## $ cls_perc_eval <dbl> 55.81395, 68.80000, 60.80000, 62.60163, 85.00000, 87.500…
## $ cls_did_eval <int> 24, 86, 76, 77, 17, 35, 39, 55, 111, 40, 24, 24, 17, 14,…
## $ cls_students <int> 43, 125, 125, 123, 20, 40, 44, 55, 195, 46, 27, 25, 20, …
## $ cls_level <fct> upper, upper, upper, upper, upper, upper, upper, upper, …
## $ cls_profs <fct> single, single, single, single, multiple, multiple, mult…
## $ cls_credits <fct> multi credit, multi credit, multi credit, multi credit, …
## $ bty_f1lower <int> 5, 5, 5, 5, 4, 4, 4, 5, 5, 2, 2, 2, 2, 2, 2, 2, 2, 7, 7,…
## $ bty_f1upper <int> 7, 7, 7, 7, 4, 4, 4, 2, 2, 5, 5, 5, 5, 5, 5, 5, 5, 9, 9,…
## $ bty_f2upper <int> 6, 6, 6, 6, 2, 2, 2, 5, 5, 4, 4, 4, 4, 4, 4, 4, 4, 9, 9,…
## $ bty_m1lower <int> 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 7, 7,…
## $ bty_m1upper <int> 4, 4, 4, 4, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 6, 6,…
## $ bty_m2upper <int> 6, 6, 6, 6, 3, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 6, 6,…
## $ bty_avg <dbl> 5.000, 5.000, 5.000, 5.000, 3.000, 3.000, 3.000, 3.333, …
## $ pic_outfit <fct> not formal, not formal, not formal, not formal, not form…
## $ pic_color <fct> color, color, color, color, color, color, color, color, …
?evals
## starting httpd help server ... done
hist(evals$score)
plot(evals$rank, evals$age)
### Simple linear regression
ggplot(data = evals, aes(x = bty_avg, y = score)) +
geom_point()
#### There are 463 rows in the data set, but fewer points on the scatter
plot.
nrow(evals)
## [1] 463
ggplot(data = evals, aes(x = bty_avg, y = score)) +
geom_jitter()
m_bty <- lm(evals$score ~ evals$bty_avg)
summary(m_bty)
##
## Call:
## lm(formula = evals$score ~ evals$bty_avg)
##
## Residuals:
## Min 1Q Median 3Q Max
## -1.9246 -0.3690 0.1420 0.3977 0.9309
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 3.88034 0.07614 50.96 < 2e-16 ***
## evals$bty_avg 0.06664 0.01629 4.09 5.08e-05 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 0.5348 on 461 degrees of freedom
## Multiple R-squared: 0.03502, Adjusted R-squared: 0.03293
## F-statistic: 16.73 on 1 and 461 DF, p-value: 5.083e-05
ggplot(data = evals, aes(x = bty_avg, y = score)) +
geom_jitter() +
geom_smooth(method = "lm")
## `geom_smooth()` using formula 'y ~ x'
ggplot(data = evals, aes(x = bty_avg, y = score)) +
geom_jitter() +
geom_smooth(method = "lm", se = FALSE)
## `geom_smooth()` using formula 'y ~ x'
plot(m_bty$residuals ~ evals$bty_avg,
xlab = "Beauty", ylab = "Residuals",
pch = 19,
axes = FALSE)
axis(1, at = seq(-1, 2, 1))
axis(2, at = seq(-1, 1, 1))
box()
abline(h = 0, lty = 3)
hist(m_bty$residuals,
xlab = "Residuals", ylab = "", main = "",
xlim = c(-2,2))
qqnorm(m_bty$residuals,
pch = 19,
main = "", las = 0)
qqline(m_bty$residuals)
plot(m_bty$residuals,
xlab = "Order of data collection", ylab = "Residuals", main = "",
pch = 19,
ylim = c(-1.82, 1.82), axes = FALSE)
axis(1)
axis(2, at = seq(-1, 1, 1))
box()
abline(h = 0, lty = 3)
### Multiple linar regresssion
ggplot(data = evals, aes(x = bty_f1lower, y = bty_avg)) +
geom_point()
evals %>%
summarise(cor(bty_avg, bty_f1lower))
## # A tibble: 1 × 1
## `cor(bty_avg, bty_f1lower)`
## <dbl>
## 1 0.844
evals %>%
select(contains("bty")) %>%
ggpairs()
m_bty_gen <- lm(score ~ bty_avg + gender, data = evals)
summary(m_bty_gen)
##
## Call:
## lm(formula = score ~ bty_avg + gender, data = evals)
##
## Residuals:
## Min 1Q Median 3Q Max
## -1.8305 -0.3625 0.1055 0.4213 0.9314
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 3.74734 0.08466 44.266 < 2e-16 ***
## bty_avg 0.07416 0.01625 4.563 6.48e-06 ***
## gendermale 0.17239 0.05022 3.433 0.000652 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 0.5287 on 460 degrees of freedom
## Multiple R-squared: 0.05912, Adjusted R-squared: 0.05503
## F-statistic: 14.45 on 2 and 460 DF, p-value: 8.177e-07
plot(m_bty_gen)
par(mfrow = c(2, 2))
plot(m_bty_gen$residuals ~ evals$bty_avg,
xlab = "Beauty", ylab = "Residuals",
pch = 19,
axes = FALSE)
axis(1, at = seq(-1, 2, 1))
axis(2, at = seq(-1, 1, 1))
box()
abline(h = 0, lty = 3)
hist(m_bty_gen$residuals,
xlab = "Residuals", ylab = "", main = "",
xlim = c(-2,2))
qqnorm(m_bty_gen$residuals,
pch = 19,
main = "", las = 0)
qqline(m_bty_gen$residuals)
plot(m_bty_gen$residuals,
xlab = "Order of data collection", ylab = "Residuals", main = "",
pch = 19,
ylim = c(-1.82, 1.82), axes = FALSE)
axis(1)
axis(2, at = seq(-1, 1, 1))
box()
abline(h = 0, lty = 3)
m_bty_rank <- lm(score ~ bty_avg + rank, data = evals)
summary(m_bty_rank)
##
## Call:
## lm(formula = score ~ bty_avg + rank, data = evals)
##
## Residuals:
## Min 1Q Median 3Q Max
## -1.8713 -0.3642 0.1489 0.4103 0.9525
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 3.98155 0.09078 43.860 < 2e-16 ***
## bty_avg 0.06783 0.01655 4.098 4.92e-05 ***
## ranktenure track -0.16070 0.07395 -2.173 0.0303 *
## ranktenured -0.12623 0.06266 -2.014 0.0445 *
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 0.5328 on 459 degrees of freedom
## Multiple R-squared: 0.04652, Adjusted R-squared: 0.04029
## F-statistic: 7.465 on 3 and 459 DF, p-value: 6.88e-05
m_full <- lm(score ~ rank + gender + ethnicity + language + age + cls_perc_eval
+ cls_students + cls_level + cls_profs + cls_credits + bty_avg
+ pic_outfit + pic_color, data = evals)
summary(m_full)
##
## Call:
## lm(formula = score ~ rank + gender + ethnicity + language + age +
## cls_perc_eval + cls_students + cls_level + cls_profs + cls_credits +
## bty_avg + pic_outfit + pic_color, data = evals)
##
## Residuals:
## Min 1Q Median 3Q Max
## -1.77397 -0.32432 0.09067 0.35183 0.95036
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 4.0952141 0.2905277 14.096 < 2e-16 ***
## ranktenure track -0.1475932 0.0820671 -1.798 0.07278 .
## ranktenured -0.0973378 0.0663296 -1.467 0.14295
## gendermale 0.2109481 0.0518230 4.071 5.54e-05 ***
## ethnicitynot minority 0.1234929 0.0786273 1.571 0.11698
## languagenon-english -0.2298112 0.1113754 -2.063 0.03965 *
## age -0.0090072 0.0031359 -2.872 0.00427 **
## cls_perc_eval 0.0053272 0.0015393 3.461 0.00059 ***
## cls_students 0.0004546 0.0003774 1.205 0.22896
## cls_levelupper 0.0605140 0.0575617 1.051 0.29369
## cls_profssingle -0.0146619 0.0519885 -0.282 0.77806
## cls_creditsone credit 0.5020432 0.1159388 4.330 1.84e-05 ***
## bty_avg 0.0400333 0.0175064 2.287 0.02267 *
## pic_outfitnot formal -0.1126817 0.0738800 -1.525 0.12792
## pic_colorcolor -0.2172630 0.0715021 -3.039 0.00252 **
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 0.498 on 448 degrees of freedom
## Multiple R-squared: 0.1871, Adjusted R-squared: 0.1617
## F-statistic: 7.366 on 14 and 448 DF, p-value: 6.552e-14
drop_cls_profs <- lm(score ~ rank + ethnicity + gender + language + age + cls_perc_eval
+ cls_students + cls_level + cls_credits + bty_avg
+ pic_outfit + pic_color, data = evals)
summary(drop_cls_profs)
##
## Call:
## lm(formula = score ~ rank + ethnicity + gender + language + age +
## cls_perc_eval + cls_students + cls_level + cls_credits +
## bty_avg + pic_outfit + pic_color, data = evals)
##
## Residuals:
## Min 1Q Median 3Q Max
## -1.7836 -0.3257 0.0859 0.3513 0.9551
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 4.0872523 0.2888562 14.150 < 2e-16 ***
## ranktenure track -0.1476746 0.0819824 -1.801 0.072327 .
## ranktenured -0.0973829 0.0662614 -1.470 0.142349
## ethnicitynot minority 0.1274458 0.0772887 1.649 0.099856 .
## gendermale 0.2101231 0.0516873 4.065 5.66e-05 ***
## languagenon-english -0.2282894 0.1111305 -2.054 0.040530 *
## age -0.0089992 0.0031326 -2.873 0.004262 **
## cls_perc_eval 0.0052888 0.0015317 3.453 0.000607 ***
## cls_students 0.0004687 0.0003737 1.254 0.210384
## cls_levelupper 0.0606374 0.0575010 1.055 0.292200
## cls_creditsone credit 0.5061196 0.1149163 4.404 1.33e-05 ***
## bty_avg 0.0398629 0.0174780 2.281 0.023032 *
## pic_outfitnot formal -0.1083227 0.0721711 -1.501 0.134080
## pic_colorcolor -0.2190527 0.0711469 -3.079 0.002205 **
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 0.4974 on 449 degrees of freedom
## Multiple R-squared: 0.187, Adjusted R-squared: 0.1634
## F-statistic: 7.943 on 13 and 449 DF, p-value: 2.336e-14
m_best <- lm(score ~ ethnicity + gender + language + age + cls_perc_eval
+ cls_credits + bty_avg + pic_color, data = evals)
summary(m_best)
##
## Call:
## lm(formula = score ~ ethnicity + gender + language + age + cls_perc_eval +
## cls_credits + bty_avg + pic_color, data = evals)
##
## Residuals:
## Min 1Q Median 3Q Max
## -1.85320 -0.32394 0.09984 0.37930 0.93610
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 3.771922 0.232053 16.255 < 2e-16 ***
## ethnicitynot minority 0.167872 0.075275 2.230 0.02623 *
## gendermale 0.207112 0.050135 4.131 4.30e-05 ***
## languagenon-english -0.206178 0.103639 -1.989 0.04726 *
## age -0.006046 0.002612 -2.315 0.02108 *
## cls_perc_eval 0.004656 0.001435 3.244 0.00127 **
## cls_creditsone credit 0.505306 0.104119 4.853 1.67e-06 ***
## bty_avg 0.051069 0.016934 3.016 0.00271 **
## pic_colorcolor -0.190579 0.067351 -2.830 0.00487 **
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 0.4992 on 454 degrees of freedom
## Multiple R-squared: 0.1722, Adjusted R-squared: 0.1576
## F-statistic: 11.8 on 8 and 454 DF, p-value: 2.58e-15
par(mfrow = c(2, 2))
plot(m_best)
hist(m_best$residuals)
# Normal Probability Plot
qqnorm(m_best$residuals)
qqline(m_best$residuals)