A very typical little data shuffling excersice based on a real-life example.
——– Forwarded Message ——–
From: S To: Me Subject: Delete duplicates: Again!!
Good day, This time, I think, a much simpler issue. In the attached file, you can see many duplicates in column A. I want to keep the duplicates if they have same value in column B (green filled). BUT, if the duplicates have different numbers (red filled) in column B (-1 vs +1), I want to delete the row (s) with -1 and keep the ones with +1. Could you please help me doing this either in linux or R? Many thanks :) Cheers, S
df <- read.csv("changed_genes_FL.csv",
sep = ",",
header = FALSE)
head(df)
## V1 V2
## 1 AT1G01060.4 1
## 2 AT1G01090.1 1
## 3 AT1G01090.1 -1
## 4 AT1G01200.1 -1
## 5 AT1G01225.1 1
## 6 AT1G01225.1 -1
tail(df)
## V1 V2
## 7155 ATMG00510.1 1
## 7156 ATMG00810.1 -1
## 7157 ATMG00810.1 -1
## 7158 ATMG01250.1 -1
## 7159 ATMG01320.1 1
## 7160 ATMG01320.1 1
Get some idea of the data. Let's find the unique genes
unique(df$V1)
## [1] AT1G01060.4 AT1G01090.1 AT1G01200.1 AT1G01225.1 AT1G01230.1
## [6] AT1G01300.1 AT1G01360.1 AT1G01380.1 AT1G01490.2 AT1G01510.1
## [11] AT1G01540.2 AT1G01620.1 AT1G01630.1 AT1G01720.1 AT1G01730.1
## [16] AT1G01770.1 AT1G01930.1 AT1G01950.3 AT1G01980.1 AT1G02040.1
## [21] AT1G02070.1 AT1G02180.1 AT1G02475.1 AT1G02500.2 AT1G02520.1
## [26] AT1G02640.1 AT1G02660.1 AT1G02700.1 AT1G02816.1 AT1G02840.3
## [31] AT1G02850.5 AT1G02860.2 AT1G02930.2 AT1G03010.1 AT1G03070.2
## [36] AT1G03080.1 AT1G03090.1 AT1G03090.2 AT1G03220.1 AT1G03230.1
## [41] AT1G03310.1 AT1G03350.1 AT1G03360.1 AT1G03400.1 AT1G03457.2
## [46] AT1G03495.1 AT1G03520.2 AT1G03530.1 AT1G03560.1 AT1G03610.1
## [51] AT1G03620.1 AT1G03670.1 AT1G03700.1 AT1G03730.1 AT1G03780.3
## [56] AT1G03820.1 AT1G03900.1 AT1G03980.1 AT1G04030.1 AT1G04040.1
## [61] AT1G04120.2 AT1G04130.1 AT1G04160.1 AT1G04180.1 AT1G04250.1
## [66] AT1G04500.1 AT1G04520.1 AT1G04530.1 AT1G04620.1 AT1G04680.1
## [71] AT1G04690.1 AT1G04910.1 AT1G04945.3 AT1G05010.1 AT1G05030.1
## [76] AT1G05100.1 AT1G05170.2 AT1G05200.2 AT1G05210.1 AT1G05270.1
## [81] AT1G05370.1 AT1G05385.1 AT1G05410.2 AT1G05460.1 AT1G05470.1
## [86] AT1G05500.1 AT1G05590.1 AT1G05600.2 AT1G05710.5 AT1G05810.1
## [91] AT1G05840.1 AT1G05850.1 AT1G06320.1 AT1G06470.2 AT1G06475.1
## [96] AT1G06570.1 AT1G06620.1 AT1G06640.1 AT1G06650.2 AT1G06660.1
## [101] AT1G06890.3 AT1G06920.1 AT1G07040.1 AT1G07220.1 AT1G07250.1
## [106] AT1G07260.1 AT1G07280.3 AT1G07310.1 AT1G07350.2 AT1G07380.1
## [111] AT1G07440.2 AT1G07530.1 AT1G07620.1 AT1G07650.2 AT1G07710.1
## [116] AT1G07830.1 AT1G07840.1 AT1G07870.2 AT1G07980.1 AT1G08050.1
## [121] AT1G08070.1 AT1G08080.1 AT1G08230.2 AT1G08260.1 AT1G08290.1
## [126] AT1G08315.1 AT1G08320.3 AT1G08500.1 AT1G08510.1 AT1G08530.1
## [131] AT1G08550.2 AT1G08560.1 AT1G08570.2 AT1G08650.2 AT1G08710.2
## [136] AT1G08720.1 AT1G08760.1 AT1G08800.2 AT1G08820.2 AT1G08840.2
## [141] AT1G08920.2 AT1G08920.3 AT1G08970.2 AT1G08980.1 AT1G09070.1
## [146] AT1G09090.2 AT1G09160.1 AT1G09210.1 AT1G09220.1 AT1G09270.2
## [151] AT1G09270.3 AT1G09280.1 AT1G09320.1 AT1G09330.1 AT1G09390.1
## [156] AT1G09420.2 AT1G09430.1 AT1G09460.1 AT1G09540.1 AT1G09610.1
## [161] AT1G09750.1 AT1G09780.1 AT1G09795.1 AT1G09850.1 AT1G09890.1
## [166] AT1G09930.1 AT1G09970.2 AT1G09980.2 AT1G10020.1 AT1G10120.1
## [171] AT1G10130.1 AT1G10170.1 AT1G10200.1 AT1G10310.1 AT1G10320.1
## [176] AT1G10370.1 AT1G10390.2 AT1G10470.1 AT1G10480.1 AT1G10510.1
## [181] AT1G10550.1 AT1G10600.3 AT1G10620.1 AT1G10720.1 AT1G10740.4
## [186] AT1G10750.1 AT1G10760.1 AT1G10820.2 AT1G10850.1 AT1G10950.1
## [191] AT1G11000.1 AT1G11050.1 AT1G11070.1 AT1G11112.1 AT1G11120.1
## [196] AT1G11310.1 AT1G11320.1 AT1G11330.2 AT1G11340.1 AT1G11350.1
## [201] AT1G11380.1 AT1G11580.1 AT1G11600.1 AT1G11710.1 AT1G11720.2
## [206] AT1G11790.1 AT1G11860.3 AT1G11905.1 AT1G11950.1 AT1G11990.1
## [211] AT1G12000.1 AT1G12020.1 AT1G12070.1 AT1G12100.1 AT1G12210.1
## [216] AT1G12220.2 AT1G12260.1 AT1G12280.1 AT1G12380.1 AT1G12420.1
## [221] AT1G12430.2 AT1G12500.1 AT1G12550.1 AT1G12620.1 AT1G12640.1
## [226] AT1G12700.1 AT1G12740.2 AT1G12800.1 AT1G12810.2 AT1G13160.1
## [231] AT1G13170.2 AT1G13180.1 AT1G13250.1 AT1G13260.1 AT1G13270.1
## [236] AT1G13340.1 AT1G13380.1 AT1G13440.1 AT1G13570.1 AT1G13635.2
## [241] AT1G13680.1 AT1G13740.1 AT1G13810.1 AT1G13860.3 AT1G13960.2
## [246] AT1G14130.1 AT1G14190.1 AT1G14205.1 AT1G14220.1 AT1G14340.1
## [251] AT1G14610.1 AT1G14670.1 AT1G14700.1 AT1G14720.1 AT1G14790.1
## [256] AT1G14830.1 AT1G14870.1 AT1G14890.1 AT1G15080.1 AT1G15110.1
## [261] AT1G15130.1 AT1G15160.1 AT1G15170.1 AT1G15240.3 AT1G15260.1
## [266] AT1G15340.1 AT1G15380.2 AT1G15410.1 AT1G15490.1 AT1G15500.1
## [271] AT1G15520.1 AT1G15570.1 AT1G15630.1 AT1G15660.1 AT1G15690.1
## [276] AT1G15690.2 AT1G15750.4 AT1G15760.1 AT1G15800.1 AT1G15860.3
## [281] AT1G15890.1 AT1G15940.1 AT1G15960.1 AT1G15980.1 AT1G16070.2
## [286] AT1G16120.1 AT1G16240.3 AT1G16270.2 AT1G16320.1 AT1G16610.2
## [291] AT1G16610.3 AT1G16670.1 AT1G16780.1 AT1G16810.2 AT1G16840.1
## [296] AT1G16860.1 AT1G16900.1 AT1G17020.1 AT1G17070.1 AT1G17100.1
## [301] AT1G17110.2 AT1G17120.1 AT1G17170.1 AT1G17180.1 AT1G17230.1
## [306] AT1G17350.1 AT1G17360.1 AT1G17370.2 AT1G17500.1 AT1G17600.1
## [311] AT1G17615.1 AT1G17620.1 AT1G17640.1 AT1G17650.1 AT1G17680.2
## [316] AT1G17710.1 AT1G17710.2 AT1G17720.2 AT1G17840.1 AT1G17850.2
## [321] AT1G17950.1 AT1G18010.1 AT1G18190.1 AT1G18265.1 AT1G18270.3
## [326] AT1G18290.1 AT1G18300.1 AT1G18370.1 AT1G18460.1 AT1G18500.1
## [331] AT1G18550.1 AT1G18610.1 AT1G18640.2 AT1G18650.1 AT1G18720.1
## [336] AT1G18800.1 AT1G19090.1 AT1G19110.1 AT1G19130.1 AT1G19170.1
## [341] AT1G19180.2 AT1G19230.2 AT1G19250.1 AT1G19300.1 AT1G19390.1
## [346] AT1G19430.1 AT1G19440.1 AT1G19450.1 AT1G19490.1 AT1G19530.1
## [351] AT1G19550.1 AT1G19630.1 AT1G19650.1 AT1G19710.1 AT1G19715.3
## [356] AT1G19835.2 AT1G19850.1 AT1G19940.1 AT1G20030.2 AT1G20160.1
## [361] AT1G20190.1 AT1G20430.1 AT1G20440.1 AT1G20510.2 AT1G20560.1
## [366] AT1G20610.1 AT1G20640.2 AT1G20693.1 AT1G20720.1 AT1G20750.1
## [371] AT1G20823.1 AT1G20880.2 AT1G20925.1 AT1G20930.1 AT1G20950.1
## [376] AT1G20970.1 AT1G21000.1 AT1G21000.2 AT1G21070.1 AT1G21140.1
## [381] AT1G21200.1 AT1G21270.1 AT1G21280.1 AT1G21390.1 AT1G21410.1
## [386] AT1G21460.1 AT1G21480.1 AT1G21510.1 AT1G21590.1 AT1G21680.1
## [391] AT1G21740.1 AT1G21780.2 AT1G21790.1 AT1G21830.1 AT1G21970.1
## [396] AT1G21980.1 AT1G22030.1 AT1G22060.1 AT1G22280.3 AT1G22370.2
## [401] AT1G22480.1 AT1G22610.1 AT1G22620.1 AT1G22640.1 AT1G22750.4
## [406] AT1G22880.1 AT1G22970.1 AT1G23010.1 AT1G23030.1 AT1G23090.1
## [411] AT1G23190.1 AT1G23210.1 AT1G23220.1 AT1G23280.1 AT1G23300.1
## [416] AT1G23390.1 AT1G23440.1 AT1G23530.1 AT1G23710.1 AT1G23720.1
## [421] AT1G23740.1 AT1G23780.1 AT1G23790.1 AT1G23800.1 AT1G23820.2
## [426] AT1G23870.1 AT1G23980.1 AT1G24020.2 AT1G24030.1 AT1G24120.1
## [431] AT1G24130.1 AT1G24320.1 AT1G24460.2 AT1G24580.1 AT1G24620.1
## [436] AT1G24764.1 AT1G25250.1 AT1G25275.3 AT1G25320.1 AT1G25360.1
## [441] AT1G25370.1 AT1G25375.1 AT1G25510.1 AT1G25570.1 AT1G26130.2
## [446] AT1G26150.1 AT1G26320.1 AT1G26320.2 AT1G26355.1 AT1G26530.1
## [451] AT1G26560.1 AT1G26610.1 AT1G26770.2 AT1G26800.1 AT1G26810.1
## [456] AT1G26920.1 AT1G27045.1 AT1G27050.1 AT1G27060.1 AT1G27120.1
## [461] AT1G27170.2 AT1G27180.1 AT1G27190.1 AT1G27200.1 AT1G27210.1
## [466] AT1G27290.2 AT1G27300.1 AT1G27310.1 AT1G27320.1 AT1G27500.1
## [471] AT1G27570.1 AT1G27600.2 AT1G27620.1 AT1G27650.1 AT1G27660.1
## [476] AT1G27670.1 AT1G27720.1 AT1G27730.1 AT1G27850.1 AT1G27870.1
## [481] AT1G27880.1 AT1G27930.1 AT1G27970.2 AT1G28110.2 AT1G28140.1
## [486] AT1G28150.1 AT1G28190.1 AT1G28200.1 AT1G28240.1 AT1G28310.2
## [491] AT1G28320.1 AT1G28330.4 AT1G28340.1 AT1G28380.1 AT1G28400.1
## [496] AT1G28440.1 AT1G28470.1 AT1G28490.2 AT1G28710.3 AT1G29050.1
## [501] AT1G29170.3 AT1G29200.2 AT1G29270.1 AT1G29300.1 AT1G29320.1
## [506] AT1G29330.1 AT1G29340.1 AT1G29380.1 AT1G29395.1 AT1G29400.2
## [511] AT1G29420.1 AT1G29520.1 AT1G29530.1 AT1G29630.3 AT1G29720.1
## [516] AT1G29740.1 AT1G29750.2 AT1G29880.1 AT1G29940.1 AT1G30010.1
## [521] AT1G30050.1 AT1G30070.2 AT1G30090.1 AT1G30200.1 AT1G30210.2
## [526] AT1G30220.1 AT1G30230.2 AT1G30240.2 AT1G30320.1 AT1G30440.1
## [531] AT1G30475.4 AT1G30515.1 AT1G30570.1 AT1G30600.1 AT1G30620.3
## [536] AT1G30630.1 AT1G30650.1 AT1G30690.2 AT1G30900.1 AT1G30910.1
## [541] AT1G30920.1 AT1G31040.1 AT1G31070.2 AT1G31120.1 AT1G31300.2
## [546] AT1G31335.1 AT1G31420.1 AT1G31430.1 AT1G31480.1 AT1G31650.1
## [551] AT1G31720.1 AT1G31730.1 AT1G31760.1 AT1G31812.1 AT1G31860.1
## [556] AT1G31940.1 AT1G32090.1 AT1G32100.1 AT1G32120.1 AT1G32170.1
## [561] AT1G32190.2 AT1G32250.1 AT1G32410.5 AT1G32440.1 AT1G32540.3
## [566] AT1G32700.2 AT1G32750.1 AT1G32770.1 AT1G32860.1 AT1G32900.1
## [571] AT1G32920.1 AT1G32928.1 AT1G33060.2 AT1G33170.1 AT1G33260.2
## [576] AT1G33390.1 AT1G33400.1 AT1G33410.2 AT1G33490.1 AT1G33540.1
## [581] AT1G33800.1 AT1G34150.1 AT1G34355.1 AT1G34370.1 AT1G34420.1
## [586] AT1G34430.1 AT1G34470.1 AT1G34550.1 AT1G34575.1 AT1G35160.2
## [591] AT1G35190.2 AT1G35220.1 AT1G35230.1 AT1G35330.1 AT1G35660.1
## [596] AT1G35680.1 AT1G35710.1 AT1G35830.1 AT1G36150.1 AT1G36160.2
## [601] AT1G38131.1 AT1G41820.1 AT1G42190.1 AT1G42540.1 AT1G42990.1
## [606] AT1G43005.1 AT1G43130.1 AT1G43170.8 AT1G43760.1 AT1G43850.2
## [611] AT1G43890.3 AT1G44110.1 AT1G44120.1 AT1G44170.2 AT1G44191.1
## [616] AT1G44478.1 AT1G44760.1 AT1G44920.1 AT1G45110.1 AT1G45160.2
## [621] AT1G45191.2 AT1G45207.2 AT1G45230.1 AT1G45688.1 AT1G46264.1
## [626] AT1G46768.1 AT1G47128.1 AT1G47200.1 AT1G47220.1 AT1G47290.2
## [631] AT1G47380.1 AT1G47410.2 AT1G47480.1 AT1G47640.1 AT1G47720.1
## [636] AT1G47740.2 AT1G47830.1 AT1G47840.1 AT1G47960.1 AT1G48030.2
## [641] AT1G48050.1 AT1G48100.1 AT1G48150.1 AT1G48175.1 AT1G48260.1
## [646] AT1G48280.1 AT1G48310.1 AT1G48410.3 AT1G48430.1 AT1G48460.1
## [651] AT1G48480.1 AT1G48540.2 AT1G48570.1 AT1G48590.3 AT1G48600.2
## [656] AT1G48800.1 AT1G48850.1 AT1G48880.1 AT1G48910.1 AT1G48960.1
## [661] AT1G49000.1 AT1G49170.1 AT1G49230.1 AT1G49310.1 AT1G49320.1
## [666] AT1G49390.1 AT1G49475.1 AT1G49490.1 AT1G49570.1 AT1G49620.1
## [671] AT1G49670.2 AT1G49700.2 AT1G49710.1 AT1G49780.1 AT1G49820.1
## [676] AT1G49870.2 AT1G49890.1 AT1G49970.1 AT1G49980.1 AT1G50010.1
## [681] AT1G50020.1 AT1G50030.1 AT1G50120.1 AT1G50180.1 AT1G50240.2
## [686] AT1G50320.1 AT1G50420.1 AT1G50460.1 AT1G50490.1 AT1G50500.2
## [691] AT1G50640.1 AT1G50710.1 AT1G50730.1 AT1G50840.1 AT1G50870.1
## [696] AT1G50900.1 AT1G50920.1 AT1G51120.1 AT1G51130.1 AT1G51160.2
## [701] AT1G51340.2 AT1G51410.1 AT1G51540.1 AT1G51550.1 AT1G51600.2
## [706] AT1G51680.3 AT1G51805.1 AT1G52030.1 AT1G52080.1 AT1G52150.2
## [711] AT1G52155.1 AT1G52220.2 AT1G52240.1 AT1G52290.1 AT1G52330.2
## [716] AT1G52342.1 AT1G52360.2 AT1G52500.2 AT1G52540.1 AT1G52560.1
## [721] AT1G52560.2 AT1G52570.1 AT1G52600.1 AT1G52640.1 AT1G52720.1
## [726] AT1G52760.1 AT1G52780.1 AT1G52920.1 AT1G53030.1 AT1G53035.1
## [731] AT1G53040.2 AT1G53050.1 AT1G53090.2 AT1G53140.1 AT1G53190.2
## [736] AT1G53200.2 AT1G53210.1 AT1G53310.3 AT1G53380.3 AT1G53400.1
## [741] AT1G53420.1 AT1G53430.2 AT1G53440.1 AT1G53460.1 AT1G53470.1
## [746] AT1G53490.1 AT1G53510.1 AT1G53670.1 AT1G53720.1 AT1G53730.2
## [751] AT1G53760.2 AT1G53820.1 AT1G53840.1 AT1G54050.1 AT1G54060.1
## [756] AT1G54140.1 AT1G54200.1 AT1G54280.1 AT1G54385.2 AT1G54410.1
## [761] AT1G54500.1 AT1G54510.3 AT1G54520.1 AT1G54570.1 AT1G54610.3
## [766] AT1G54730.2 AT1G54790.2 AT1G54990.1 AT1G55020.1 AT1G55080.1
## [771] AT1G55110.1 AT1G55120.1 AT1G55140.2 AT1G55190.1 AT1G55260.1
## [776] AT1G55265.1 AT1G55310.3 AT1G55320.1 AT1G55325.2 AT1G55340.2
## [781] AT1G55350.5 AT1G55540.2 AT1G55550.1 AT1G55670.1 AT1G55690.2
## [786] AT1G55740.1 AT1G55810.2 AT1G55850.1 AT1G55870.1 AT1G55870.2
## [791] AT1G55880.1 AT1G55910.1 AT1G55915.1 AT1G56000.1 AT1G56080.1
## [796] AT1G56145.1 AT1G56145.2 AT1G56190.1 AT1G56210.1 AT1G56230.1
## [801] AT1G56300.1 AT1G56340.1 AT1G56350.1 AT1G56500.1 AT1G56530.1
## [806] AT1G56600.1 AT1G56660.1 AT1G56720.3 AT1G57590.1 AT1G57765.2
## [811] AT1G58070.1 AT1G58120.1 AT1G58170.1 AT1G58190.1 AT1G58210.1
## [816] AT1G58440.1 AT1G58520.1 AT1G58725.1 AT1G59610.1 AT1G59640.2
## [821] AT1G59650.1 AT1G59840.2 AT1G59940.1 AT1G59950.1 AT1G59960.1
## [826] AT1G59990.1 AT1G60010.1 AT1G60030.1 AT1G60060.1 AT1G60420.1
## [831] AT1G60440.1 AT1G60460.3 AT1G60470.1 AT1G60590.1 AT1G60660.1
## [836] AT1G60680.1 AT1G60690.1 AT1G60710.1 AT1G60810.1 AT1G60870.1
## [841] AT1G60900.1 AT1G61000.1 AT1G61080.1 AT1G61170.1 AT1G61240.4
## [846] AT1G61260.1 AT1G61310.1 AT1G61560.1 AT1G61560.2 AT1G61670.1
## [851] AT1G61720.1 AT1G61730.1 AT1G61740.1 AT1G61850.1 AT1G61850.2
## [856] AT1G61900.1 AT1G62020.1 AT1G62050.1 AT1G62290.2 AT1G62300.1
## [861] AT1G62305.1 AT1G62330.1 AT1G62400.1 AT1G62422.1 AT1G62520.1
## [866] AT1G62620.1 AT1G62710.1 AT1G62760.1 AT1G62780.1 AT1G62910.1
## [871] AT1G62950.1 AT1G62990.1 AT1G63000.1 AT1G63100.1 AT1G63110.1
## [876] AT1G63120.1 AT1G63220.2 AT1G63250.1 AT1G63260.1 AT1G63300.1
## [881] AT1G63310.1 AT1G63420.1 AT1G63430.2 AT1G63440.1 AT1G63520.1
## [886] AT1G63650.3 AT1G63660.1 AT1G63810.1 AT1G63830.3 AT1G63850.1
## [891] AT1G63860.2 AT1G63930.1 AT1G64050.2 AT1G64140.1 AT1G64180.1
## [896] AT1G64330.1 AT1G64390.1 AT1G64450.1 AT1G64480.1 AT1G64520.1
## [901] AT1G64550.1 AT1G64600.1 AT1G64660.1 AT1G64690.1 AT1G64720.1
## [906] AT1G64940.1 AT1G64980.1 AT1G64990.2 AT1G65060.2 AT1G65070.2
## [911] AT1G65180.1 AT1G65295.1 AT1G65440.2 AT1G65470.1 AT1G65520.1
## [916] AT1G65710.1 AT1G65780.1 AT1G65800.1 AT1G65810.2 AT1G65820.3
## [921] AT1G65850.2 AT1G65870.1 AT1G65900.1 AT1G65910.1 AT1G65950.1
## [926] AT1G66140.1 AT1G66150.1 AT1G66340.1 AT1G66360.1 AT1G66540.2
## [931] AT1G66590.2 AT1G66660.2 AT1G66670.1 AT1G66800.1 AT1G66810.1
## [936] AT1G66880.1 AT1G66920.2 AT1G67030.1 AT1G67040.1 AT1G67060.1
## [941] AT1G67090.1 AT1G67120.1 AT1G67280.2 AT1G67300.2 AT1G67310.1
## [946] AT1G67340.1 AT1G67400.1 AT1G67410.1 AT1G67440.1 AT1G67500.2
## [951] AT1G67510.1 AT1G67560.1 AT1G67580.2 AT1G67600.1 AT1G67630.1
## [956] AT1G67710.1 AT1G67730.1 AT1G67740.1 AT1G67750.1 AT1G67780.1
## [961] AT1G67820.1 AT1G67830.1 AT1G67850.2 AT1G67856.1 AT1G67870.1
## [966] AT1G67910.2 AT1G67930.1 AT1G67980.1 AT1G68010.2 AT1G68020.2
## [971] AT1G68050.1 AT1G68060.1 AT1G68100.1 AT1G68130.1 AT1G68190.1
## [976] AT1G68330.1 AT1G68400.1 AT1G68410.2 AT1G68440.1 AT1G68470.1
## [981] AT1G68490.1 AT1G68550.2 AT1G68560.1 AT1G68570.1 AT1G68580.2
## [986] AT1G68585.1 AT1G68680.1 AT1G68690.1 AT1G68710.1 AT1G68730.1
## [991] AT1G68795.1 AT1G68810.1 AT1G68830.1 AT1G68910.3 AT1G68990.2
## [996] AT1G69040.2 AT1G69050.1 AT1G69080.2 AT1G69160.1 AT1G69170.1
## [1001] AT1G69200.1 AT1G69230.2 AT1G69290.1 AT1G69310.2 AT1G69380.1
## [1006] AT1G69420.1 AT1G69430.1 AT1G69490.1 AT1G69530.2 AT1G69550.1
## [1011] AT1G69640.1 AT1G69680.1 AT1G69710.1 AT1G69730.1 AT1G69760.1
## [1016] AT1G69770.1 AT1G69780.1 AT1G69870.1 AT1G69935.1 AT1G70070.1
## [1021] AT1G70090.2 AT1G70170.1 AT1G70230.1 AT1G70250.1 AT1G70300.1
## [1026] AT1G70330.1 AT1G70370.2 AT1G70460.1 AT1G70480.2 AT1G70650.2
## [1031] AT1G70730.3 AT1G70750.1 AT1G70780.1 AT1G70782.1 AT1G70840.1
## [1036] AT1G70940.1 AT1G70990.1 AT1G71000.1 AT1G71110.1 AT1G71140.1
## [1041] AT1G71210.1 AT1G71240.2 AT1G71270.1 AT1G71430.1 AT1G71695.1
## [1046] AT1G71710.2 AT1G71720.1 AT1G71730.1 AT1G71750.2 AT1G71790.1
## [1051] AT1G71830.1 AT1G71880.1 AT1G71970.1 AT1G71980.1 AT1G72040.1
## [1056] AT1G72050.2 AT1G72080.1 AT1G72160.1 AT1G72210.1 AT1G72220.1
## [1061] AT1G72250.2 AT1G72300.1 AT1G72430.1 AT1G72510.2 AT1G72520.1
## [1066] AT1G72680.1 AT1G72690.1 AT1G72740.2 AT1G72830.1 AT1G72830.2
## [1071] AT1G72840.2 AT1G73040.1 AT1G73050.1 AT1G73090.2 AT1G73140.1
## [1076] AT1G73170.1 AT1G73180.2 AT1G73250.1 AT1G73280.1 AT1G73380.1
## [1081] AT1G73430.2 AT1G73440.1 AT1G73490.2 AT1G73500.1 AT1G73590.1
## [1086] AT1G73620.1 AT1G73750.1 AT1G73770.2 AT1G73805.1 AT1G73830.1
## [1091] AT1G73850.1 AT1G73860.1 AT1G73880.1 AT1G73885.1 AT1G74110.1
## [1096] AT1G74220.1 AT1G74310.1 AT1G74330.2 AT1G74440.1 AT1G74470.1
## [1101] AT1G74680.1 AT1G74690.1 AT1G74780.1 AT1G74840.2 AT1G74890.1
## [1106] AT1G74910.2 AT1G74960.3 AT1G75090.1 AT1G75130.1 AT1G75150.1
## [1111] AT1G75170.3 AT1G75220.1 AT1G75250.2 AT1G75290.1 AT1G75335.1
## [1116] AT1G75360.1 AT1G75390.1 AT1G75500.2 AT1G75580.1 AT1G75590.1
## [1121] AT1G75710.1 AT1G75780.1 AT1G75820.1 AT1G75840.1 AT1G75950.1
## [1126] AT1G76020.1 AT1G76040.2 AT1G76070.1 AT1G76130.1 AT1G76150.1
## [1131] AT1G76160.1 AT1G76240.1 AT1G76280.3 AT1G76340.1 AT1G76420.1
## [1136] AT1G76460.1 AT1G76490.1 AT1G76500.1 AT1G76530.1 AT1G76610.1
## [1141] AT1G76620.1 AT1G76690.1 AT1G76990.5 AT1G77110.1 AT1G77122.1
## [1146] AT1G77130.1 AT1G77210.2 AT1G77230.1 AT1G77240.1 AT1G77280.1
## [1151] AT1G77320.2 AT1G77380.1 AT1G77405.1 AT1G77410.1 AT1G77460.2
## [1156] AT1G77580.2 AT1G77600.3 AT1G77700.1 AT1G77740.1 AT1G77800.1
## [1161] AT1G77800.2 AT1G77810.1 AT1G77855.1 AT1G77920.1 AT1G78020.1
## [1166] AT1G78070.1 AT1G78110.1 AT1G78260.1 AT1G78280.1 AT1G78300.1
## [1171] AT1G78310.1 AT1G78390.1 AT1G78430.1 AT1G78530.1 AT1G78570.1
## [1176] AT1G78580.1 AT1G78610.1 AT1G78680.2 AT1G78750.1 AT1G78815.1
## [1181] AT1G78895.1 AT1G78900.2 AT1G78910.1 AT1G78915.3 AT1G79040.1
## [1186] AT1G79150.1 AT1G79160.1 AT1G79190.1 AT1G79200.1 AT1G79260.1
## [1191] AT1G79350.1 AT1G79390.1 AT1G79460.1 AT1G79510.2 AT1G79520.2
## [1196] AT1G79540.1 AT1G79620.1 AT1G79650.1 AT1G79720.1 AT1G79750.1
## [1201] AT1G79760.1 AT1G79830.4 AT1G79900.1 AT1G79910.1 AT1G79930.2
## [1206] AT1G80070.1 AT1G80120.1 AT1G80160.1 AT1G80190.1 AT1G80245.3
## [1211] AT1G80310.1 AT1G80350.1 AT1G80380.4 AT1G80400.1 AT1G80410.2
## [1216] AT1G80440.1 AT1G80450.1 AT1G80460.1 AT1G80490.2 AT1G80510.1
## [1221] AT1G80530.1 AT1G80690.1 AT1G80730.1 AT1G80740.1 AT1G80820.1
## [1226] AT1G80840.1 AT1G80920.1 AT1G80940.2 AT2G01070.1 AT2G01110.1
## [1231] AT2G01190.1 AT2G01210.1 AT2G01220.2 AT2G01270.1 AT2G01505.1
## [1236] AT2G01590.1 AT2G01630.1 AT2G01660.2 AT2G01770.1 AT2G01830.2
## [1241] AT2G01850.1 AT2G01870.1 AT2G01900.1 AT2G01905.1 AT2G01910.1
## [1246] AT2G01950.1 AT2G01970.1 AT2G02040.1 AT2G02061.1 AT2G02080.1
## [1251] AT2G02100.1 AT2G02170.2 AT2G02230.1 AT2G02320.1 AT2G02360.1
## [1256] AT2G02390.3 AT2G02410.1 AT2G02520.1 AT2G02650.1 AT2G02710.1
## [1261] AT2G02740.2 AT2G02800.2 AT2G02850.1 AT2G02880.1 AT2G02955.1
## [1266] AT2G03140.2 AT2G03150.1 AT2G03200.1 AT2G03220.1 AT2G03350.1
## [1271] AT2G03420.1 AT2G03440.1 AT2G03530.2 AT2G03610.1 AT2G04240.2
## [1276] AT2G04270.5 AT2G04680.1 AT2G04740.1 AT2G04780.2 AT2G04790.1
## [1281] AT2G04842.1 AT2G04850.1 AT2G05160.1 AT2G05170.1 AT2G05320.1
## [1286] AT2G05630.2 AT2G05760.1 AT2G05790.1 AT2G05810.2 AT2G05830.1
## [1291] AT2G05920.1 AT2G05990.2 AT2G06010.1 AT2G06050.3 AT2G06200.1
## [1296] AT2G06255.1 AT2G06925.1 AT2G07020.1 AT2G07050.1 AT2G07170.1
## [1301] AT2G07180.2 AT2G07680.1 AT2G07706.1 AT2G07750.1 AT2G10940.2
## [1306] AT2G11520.1 AT2G11890.2 AT2G12190.1 AT2G12400.1 AT2G12462.1
## [1311] AT2G12646.1 AT2G12880.1 AT2G13100.1 AT2G13290.2 AT2G13360.2
## [1316] AT2G13690.1 AT2G13800.1 AT2G13840.1 AT2G14045.2 AT2G14110.1
## [1321] AT2G14620.1 AT2G14670.1 AT2G14680.2 AT2G14740.2 AT2G14820.1
## [1326] AT2G14830.2 AT2G14835.2 AT2G14890.1 AT2G15130.2 AT2G15280.1
## [1331] AT2G15310.1 AT2G15320.1 AT2G15430.1 AT2G15580.1 AT2G15730.1
## [1336] AT2G15770.1 AT2G15820.1 AT2G15970.1 AT2G16030.1 AT2G16050.1
## [1341] AT2G16060.1 AT2G16070.2 AT2G16210.2 AT2G16250.1 AT2G16365.4
## [1346] AT2G16370.1 AT2G16400.1 AT2G16485.1 AT2G16530.2 AT2G16575.1
## [1351] AT2G16720.1 AT2G16780.1 AT2G16900.3 AT2G16990.2 AT2G17220.2
## [1356] AT2G17230.1 AT2G17250.1 AT2G17265.1 AT2G17280.2 AT2G17290.1
## [1361] AT2G17390.1 AT2G17500.4 AT2G17510.2 AT2G17520.1 AT2G17620.1
## [1366] AT2G17650.1 AT2G17710.1 AT2G17820.1 AT2G17840.1 AT2G17890.1
## [1371] AT2G17900.1 AT2G17940.1 AT2G17990.1 AT2G18060.1 AT2G18190.1
## [1376] AT2G18230.1 AT2G18280.2 AT2G18370.1 AT2G18390.1 AT2G18420.1
## [1381] AT2G18460.1 AT2G18510.1 AT2G18630.1 AT2G18660.1 AT2G18670.1
## [1386] AT2G18700.1 AT2G18710.1 AT2G18760.1 AT2G18840.1 AT2G18850.2
## [1391] AT2G18910.1 AT2G18960.1 AT2G19110.1 AT2G19130.1 AT2G19280.2
## [1396] AT2G19330.1 AT2G19430.1 AT2G19490.1 AT2G19590.1 AT2G19660.1
## [1401] AT2G19770.1 AT2G19780.1 AT2G19810.1 AT2G19830.1 AT2G19860.2
## [1406] AT2G19870.1 AT2G19900.1 AT2G19950.2 AT2G20020.1 AT2G20190.1
## [1411] AT2G20260.1 AT2G20280.1 AT2G20300.1 AT2G20320.1 AT2G20340.1
## [1416] AT2G20520.1 AT2G20560.1 AT2G20635.1 AT2G20680.1 AT2G20725.1
## [1421] AT2G20760.1 AT2G20770.1 AT2G20780.1 AT2G20810.1 AT2G20820.2
## [1426] AT2G20840.1 AT2G20890.1 AT2G20980.1 AT2G21050.1 AT2G21070.3
## [1431] AT2G21100.1 AT2G21170.1 AT2G21180.1 AT2G21300.2 AT2G21370.1
## [1436] AT2G21380.1 AT2G21390.1 AT2G21440.1 AT2G21490.1 AT2G21510.1
## [1441] AT2G21540.2 AT2G21840.1 AT2G21860.1 AT2G21940.3 AT2G22070.1
## [1446] AT2G22125.1 AT2G22250.3 AT2G22400.1 AT2G22430.1 AT2G22490.2
## [1451] AT2G22540.1 AT2G22560.1 AT2G22570.1 AT2G22610.1 AT2G22620.1
## [1456] AT2G22640.1 AT2G22795.1 AT2G22840.1 AT2G22870.1 AT2G22900.1
## [1461] AT2G22910.1 AT2G22970.3 AT2G22990.3 AT2G23150.1 AT2G23290.1
## [1466] AT2G23340.1 AT2G23360.1 AT2G23390.1 AT2G23470.1 AT2G23540.1
## [1471] AT2G23600.1 AT2G23690.1 AT2G23760.3 AT2G23770.1 AT2G23810.1
## [1476] AT2G23910.1 AT2G23950.1 AT2G24050.1 AT2G24120.1 AT2G24190.2
## [1481] AT2G24230.1 AT2G24240.1 AT2G24260.1 AT2G24270.4 AT2G24400.1
## [1486] AT2G24430.2 AT2G24490.2 AT2G24550.1 AT2G24580.1 AT2G24590.1
## [1491] AT2G24690.1 AT2G24765.1 AT2G25060.1 AT2G25100.1 AT2G25140.1
## [1496] AT2G25260.1 AT2G25280.1 AT2G25410.1 AT2G25430.1 AT2G25490.1
## [1501] AT2G25520.1 AT2G25540.1 AT2G25560.1 AT2G25620.1 AT2G25625.1
## [1506] AT2G25735.1 AT2G25737.1 AT2G25790.1 AT2G25800.1 AT2G25880.1
## [1511] AT2G25930.1 AT2G25940.1 AT2G26000.2 AT2G26070.1 AT2G26100.1
## [1516] AT2G26150.2 AT2G26170.2 AT2G26180.1 AT2G26270.1 AT2G26330.1
## [1521] AT2G26470.1 AT2G26500.1 AT2G26550.3 AT2G26570.1 AT2G26640.1
## [1526] AT2G26650.1 AT2G26710.1 AT2G26730.1 AT2G26740.1 AT2G26760.1
## [1531] AT2G26770.2 AT2G26780.1 AT2G26790.1 AT2G26800.2 AT2G26810.3
## [1536] AT2G26870.1 AT2G26910.1 AT2G26980.4 AT2G26980.5 AT2G27090.1
## [1541] AT2G27110.2 AT2G27110.3 AT2G27230.2 AT2G27260.1 AT2G27290.1
## [1546] AT2G27450.2 AT2G27490.2 AT2G27580.2 AT2G27610.1 AT2G27680.1
## [1551] AT2G27690.1 AT2G27770.1 AT2G27820.1 AT2G27830.1 AT2G27860.1
## [1556] AT2G27920.1 AT2G27930.1 AT2G27950.1 AT2G27960.1 AT2G28100.1
## [1561] AT2G28110.1 AT2G28120.1 AT2G28200.1 AT2G28260.1 AT2G28305.1
## [1566] AT2G28310.3 AT2G28315.1 AT2G28320.1 AT2G28330.1 AT2G28370.1
## [1571] AT2G28410.1 AT2G28470.1 AT2G28470.2 AT2G28480.1 AT2G28510.1
## [1576] AT2G28520.1 AT2G28550.3 AT2G28570.1 AT2G28605.1 AT2G28660.1
## [1581] AT2G28680.1 AT2G28760.3 AT2G28810.2 AT2G28830.1 AT2G28840.2
## [1586] AT2G28870.1 AT2G28900.1 AT2G28930.1 AT2G28930.3 AT2G28950.1
## [1591] AT2G29200.1 AT2G29210.1 AT2G29380.1 AT2G29390.1 AT2G29420.1
## [1596] AT2G29490.1 AT2G29500.1 AT2G29510.1 AT2G29640.1 AT2G29710.1
## [1601] AT2G29900.1 AT2G29990.1 AT2G30020.1 AT2G30050.1 AT2G30070.1
## [1606] AT2G30080.1 AT2G30140.2 AT2G30160.1 AT2G30330.1 AT2G30360.1
## [1611] AT2G30395.1 AT2G30410.2 AT2G30490.1 AT2G30590.1 AT2G30600.5
## [1616] AT2G30720.1 AT2G30800.1 AT2G30810.1 AT2G30830.1 AT2G30840.1
## [1621] AT2G30860.2 AT2G30870.1 AT2G30910.3 AT2G30950.1 AT2G31010.2
## [1626] AT2G31040.1 AT2G31060.3 AT2G31085.1 AT2G31090.1 AT2G31160.1
## [1631] AT2G31200.1 AT2G31270.1 AT2G31280.3 AT2G31350.1 AT2G31390.1
## [1636] AT2G31410.1 AT2G31560.2 AT2G31660.1 AT2G31670.1 AT2G31740.1
## [1641] AT2G31810.3 AT2G31820.1 AT2G31840.1 AT2G31880.1 AT2G31900.1
## [1646] AT2G31930.1 AT2G31955.2 AT2G31955.3 AT2G32070.1 AT2G32090.1
## [1651] AT2G32090.2 AT2G32120.2 AT2G32240.1 AT2G32250.4 AT2G32280.1
## [1656] AT2G32540.1 AT2G32560.1 AT2G32590.1 AT2G32670.1 AT2G32700.7
## [1661] AT2G32720.1 AT2G32810.2 AT2G32850.2 AT2G32950.1 AT2G32970.2
## [1666] AT2G32980.1 AT2G33040.1 AT2G33050.1 AT2G33060.1 AT2G33150.1
## [1671] AT2G33205.1 AT2G33280.1 AT2G33360.1 AT2G33385.2 AT2G33390.1
## [1676] AT2G33400.1 AT2G33460.1 AT2G33470.2 AT2G33480.2 AT2G33550.1
## [1681] AT2G33570.1 AT2G33580.1 AT2G33600.1 AT2G33620.4 AT2G33730.1
## [1686] AT2G33770.1 AT2G33793.1 AT2G33990.1 AT2G34050.1 AT2G34060.1
## [1691] AT2G34210.1 AT2G34250.2 AT2G34300.2 AT2G34410.2 AT2G34410.3
## [1696] AT2G34430.1 AT2G34540.2 AT2G34570.1 AT2G34580.2 AT2G34585.1
## [1701] AT2G34640.1 AT2G34660.2 AT2G34670.2 AT2G34680.1 AT2G34700.1
## [1706] AT2G34710.1 AT2G34750.1 AT2G34770.1 AT2G34790.1 AT2G34820.1
## [1711] AT2G34860.2 AT2G35040.1 AT2G35040.2 AT2G35100.1 AT2G35120.1
## [1716] AT2G35155.1 AT2G35190.1 AT2G35210.1 AT2G35410.1 AT2G35490.1
## [1721] AT2G35500.1 AT2G35630.1 AT2G35680.1 AT2G35710.2 AT2G35736.2
## [1726] AT2G35760.1 AT2G35770.1 AT2G35790.1 AT2G35860.1 AT2G35880.1
## [1731] AT2G35910.1 AT2G35920.1 AT2G35940.3 AT2G35960.1 AT2G36026.1
## [1736] AT2G36080.1 AT2G36120.1 AT2G36300.1 AT2G36330.1 AT2G36390.1
## [1741] AT2G36420.1 AT2G36430.1 AT2G36530.1 AT2G36560.1 AT2G36570.1
## [1746] AT2G36690.1 AT2G36740.1 AT2G36770.1 AT2G36790.1 AT2G36830.1
## [1751] AT2G36840.1 AT2G36910.1 AT2G36950.1 AT2G36970.1 AT2G36990.1
## [1756] AT2G37040.1 AT2G37080.1 AT2G37090.1 AT2G37100.1 AT2G37220.1
## [1761] AT2G37240.1 AT2G37280.1 AT2G37290.2 AT2G37300.2 AT2G37330.1
## [1766] AT2G37370.1 AT2G37400.1 AT2G37440.2 AT2G37530.1 AT2G37580.1
## [1771] AT2G37585.1 AT2G37610.1 AT2G37650.1 AT2G37660.1 AT2G37690.1
## [1776] AT2G37710.1 AT2G37770.1 AT2G37790.1 AT2G37860.3 AT2G37870.1
## [1781] AT2G37900.1 AT2G37970.1 AT2G38000.1 AT2G38040.2 AT2G38080.1
## [1786] AT2G38120.1 AT2G38130.2 AT2G38170.3 AT2G38220.1 AT2G38250.1
## [1791] AT2G38280.2 AT2G38310.1 AT2G38320.1 AT2G38330.1 AT2G38360.1
## [1796] AT2G38370.1 AT2G38410.1 AT2G38440.1 AT2G38460.1 AT2G38470.1
## [1801] AT2G38480.1 AT2G38500.1 AT2G38620.2 AT2G38640.1 AT2G38660.3
## [1806] AT2G38690.1 AT2G38695.1 AT2G38800.1 AT2G38820.1 AT2G38910.1
## [1811] AT2G38920.3 AT2G38940.1 AT2G39020.1 AT2G39140.1 AT2G39190.1
## [1816] AT2G39210.1 AT2G39220.1 AT2G39290.1 AT2G39420.1 AT2G39435.1
## [1821] AT2G39450.1 AT2G39650.1 AT2G39670.2 AT2G39700.1 AT2G39710.1
## [1826] AT2G39720.1 AT2G39740.1 AT2G39890.2 AT2G39910.1 AT2G39970.1
## [1831] AT2G40000.1 AT2G40030.1 AT2G40060.1 AT2G40070.2 AT2G40080.1
## [1836] AT2G40120.1 AT2G40140.2 AT2G40200.1 AT2G40240.1 AT2G40280.1
## [1841] AT2G40300.1 AT2G40320.1 AT2G40370.1 AT2G40435.1 AT2G40460.1
## [1846] AT2G40470.1 AT2G40475.1 AT2G40480.1 AT2G40530.1 AT2G40540.2
## [1851] AT2G40620.1 AT2G40780.2 AT2G40840.1 AT2G40850.1 AT2G40890.1
## [1856] AT2G40940.1 AT2G41040.1 AT2G41110.2 AT2G41130.1 AT2G41140.1
## [1861] AT2G41160.1 AT2G41170.1 AT2G41190.1 AT2G41290.1 AT2G41330.1
## [1866] AT2G41350.2 AT2G41370.1 AT2G41430.5 AT2G41610.1 AT2G41670.1
## [1871] AT2G41770.1 AT2G41790.1 AT2G41820.1 AT2G41830.1 AT2G41890.1
## [1876] AT2G41990.1 AT2G42040.1 AT2G42110.1 AT2G42150.1 AT2G42160.1
## [1881] AT2G42200.1 AT2G42260.1 AT2G42280.1 AT2G42280.2 AT2G42380.2
## [1886] AT2G42450.1 AT2G42490.1 AT2G42580.1 AT2G42590.3 AT2G42600.1
## [1891] AT2G42610.2 AT2G42760.1 AT2G42840.1 AT2G42850.1 AT2G42870.1
## [1896] AT2G42880.1 AT2G42910.1 AT2G42940.1 AT2G42960.1 AT2G42975.1
## [1901] AT2G43030.1 AT2G43040.1 AT2G43060.1 AT2G43070.1 AT2G43160.1
## [1906] AT2G43235.1 AT2G43240.1 AT2G43290.1 AT2G43330.1 AT2G43400.1
## [1911] AT2G43420.1 AT2G43430.2 AT2G43680.1 AT2G43680.3 AT2G43790.1
## [1916] AT2G43800.1 AT2G43810.2 AT2G43840.2 AT2G43900.1 AT2G43940.1
## [1921] AT2G43970.2 AT2G44060.2 AT2G44150.1 AT2G44160.1 AT2G44190.1
## [1926] AT2G44310.1 AT2G44430.1 AT2G44500.1 AT2G44580.1 AT2G44590.1
## [1931] AT2G44600.1 AT2G44610.1 AT2G44660.1 AT2G44690.1 AT2G44740.1
## [1936] AT2G44770.1 AT2G44850.2 AT2G44970.2 AT2G45000.1 AT2G45010.2
## [1941] AT2G45040.1 AT2G45120.1 AT2G45200.2 AT2G45290.1 AT2G45340.1
## [1946] AT2G45470.1 AT2G45520.1 AT2G45530.1 AT2G45540.2 AT2G45550.1
## [1951] AT2G45570.1 AT2G45590.1 AT2G45600.1 AT2G45690.1 AT2G45750.1
## [1956] AT2G45760.1 AT2G45770.2 AT2G45790.1 AT2G45910.1 AT2G46060.1
## [1961] AT2G46150.1 AT2G46180.1 AT2G46190.1 AT2G46210.1 AT2G46225.2
## [1966] AT2G46270.1 AT2G46410.1 AT2G46420.2 AT2G46440.1 AT2G46460.1
## [1971] AT2G46590.2 AT2G46630.1 AT2G46640.3 AT2G46660.1 AT2G46680.1
## [1976] AT2G46710.1 AT2G46760.1 AT2G46820.2 AT2G46890.1 AT2G46970.1
## [1981] AT2G46980.3 AT2G46990.1 AT2G47000.1 AT2G47010.2 AT2G47020.1
## [1986] AT2G47140.1 AT2G47160.2 AT2G47180.1 AT2G47360.1 AT2G47390.1
## [1991] AT2G47400.1 AT2G47420.1 AT2G47440.1 AT2G47480.1 AT2G47500.1
## [1996] AT2G47590.1 AT2G47680.1 AT2G47710.1 AT2G47820.2 AT2G47880.1
## [2001] AT2G47890.1 AT2G47900.3 AT2G47940.1 AT2G47990.1 AT2G48010.1
## [2006] AT2G48030.1 AT2G48060.1 AT2G48110.1 AT3G01040.2 AT3G01090.3
## [2011] AT3G01190.1 AT3G01280.1 AT3G01310.1 AT3G01340.2 AT3G01345.1
## [2016] AT3G01430.1 AT3G01460.1 AT3G01470.1 AT3G01490.1 AT3G01540.4
## [2021] AT3G01560.1 AT3G01610.1 AT3G01620.1 AT3G01640.1 AT3G01650.1
## [2026] AT3G01680.1 AT3G01750.1 AT3G01780.1 AT3G01790.2 AT3G01810.3
## [2031] AT3G01930.2 AT3G01970.1 AT3G01980.4 AT3G01990.1 AT3G02030.1
## [2036] AT3G02050.1 AT3G02090.2 AT3G02120.1 AT3G02130.1 AT3G02210.1
## [2041] AT3G02250.1 AT3G02320.1 AT3G02360.1 AT3G02440.1 AT3G02580.1
## [2046] AT3G02600.1 AT3G02690.1 AT3G02700.1 AT3G02710.1 AT3G02720.1
## [2051] AT3G02750.3 AT3G02850.1 AT3G02875.1 AT3G02885.1 AT3G02940.1
## [2056] AT3G03040.1 AT3G03050.1 AT3G03080.1 AT3G03150.1 AT3G03210.1
## [2061] AT3G03220.1 AT3G03250.1 AT3G03300.3 AT3G03341.1 AT3G03360.1
## [2066] AT3G03450.1 AT3G03520.1 AT3G03530.1 AT3G03550.1 AT3G03680.1
## [2071] AT3G03690.1 AT3G03710.1 AT3G03750.2 AT3G03770.2 AT3G03773.1
## [2076] AT3G03890.1 AT3G03900.1 AT3G03980.1 AT3G03990.1 AT3G04030.3
## [2081] AT3G04060.1 AT3G04090.1 AT3G04100.1 AT3G04120.1 AT3G04210.1
## [2086] AT3G04220.1 AT3G04260.1 AT3G04400.2 AT3G04680.2 AT3G04720.1
## [2091] AT3G04735.1 AT3G04740.1 AT3G04760.1 AT3G04790.1 AT3G04810.2
## [2096] AT3G04860.1 AT3G04870.2 AT3G04890.1 AT3G05060.1 AT3G05150.1
## [2101] AT3G05270.2 AT3G05290.1 AT3G05330.1 AT3G05420.2 AT3G05520.2
## [2106] AT3G05540.1 AT3G05675.1 AT3G05690.1 AT3G05740.1 AT3G05750.1
## [2111] AT3G05890.1 AT3G05910.1 AT3G05936.1 AT3G05980.1 AT3G05990.1
## [2116] AT3G06035.1 AT3G06130.2 AT3G06150.1 AT3G06200.1 AT3G06240.1
## [2121] AT3G06350.1 AT3G06483.1 AT3G06510.2 AT3G06620.1 AT3G06640.1
## [2126] AT3G06650.1 AT3G06730.1 AT3G06740.1 AT3G06810.1 AT3G06840.1
## [2131] AT3G06850.2 AT3G06860.1 AT3G06880.2 AT3G06980.1 AT3G07010.1
## [2136] AT3G07130.1 AT3G07150.1 AT3G07210.1 AT3G07250.1 AT3G07310.1
## [2141] AT3G07360.1 AT3G07400.1 AT3G07480.1 AT3G07490.1 AT3G07500.1
## [2146] AT3G07510.2 AT3G07670.1 AT3G07700.3 AT3G07810.2 AT3G07870.1
## [2151] AT3G07880.1 AT3G07890.2 AT3G07950.1 AT3G07990.1 AT3G08020.1
## [2156] AT3G08500.1 AT3G08510.3 AT3G08550.1 AT3G08570.1 AT3G08600.1
## [2161] AT3G08670.1 AT3G08680.2 AT3G08690.2 AT3G08710.2 AT3G08720.2
## [2166] AT3G08760.1 AT3G08850.1 AT3G08890.2 AT3G08930.1 AT3G09000.1
## [2171] AT3G09050.1 AT3G09060.1 AT3G09110.1 AT3G09150.2 AT3G09300.1
## [2176] AT3G09320.1 AT3G09340.1 AT3G09390.1 AT3G09510.1 AT3G09550.1
## [2181] AT3G09570.1 AT3G09580.1 AT3G09640.2 AT3G09650.1 AT3G09690.2
## [2186] AT3G09740.1 AT3G09770.2 AT3G09780.1 AT3G09800.1 AT3G09830.2
## [2191] AT3G09840.1 AT3G09850.1 AT3G09980.1 AT3G10020.1 AT3G10020.2
## [2196] AT3G10080.1 AT3G10120.1 AT3G10140.1 AT3G10150.1 AT3G10185.1
## [2201] AT3G10190.1 AT3G10200.1 AT3G10220.1 AT3G10230.1 AT3G10260.3
## [2206] AT3G10300.5 AT3G10310.1 AT3G10330.1 AT3G10350.2 AT3G10370.1
## [2211] AT3G10380.1 AT3G10450.2 AT3G10530.1 AT3G10700.1 AT3G10740.1
## [2216] AT3G10760.1 AT3G10810.1 AT3G10815.1 AT3G10870.1 AT3G10910.1
## [2221] AT3G10960.1 AT3G10970.2 AT3G10985.1 AT3G11080.1 AT3G11130.1
## [2226] AT3G11150.1 AT3G11170.1 AT3G11210.1 AT3G11240.1 AT3G11320.1
## [2231] AT3G11385.1 AT3G11410.1 AT3G11420.1 AT3G11490.1 AT3G11580.2
## [2236] AT3G11590.1 AT3G11620.1 AT3G11660.1 AT3G11670.1 AT3G11690.1
## [2241] AT3G11760.1 AT3G11810.1 AT3G11910.1 AT3G11910.2 AT3G11930.3
## [2246] AT3G11964.1 AT3G12020.2 AT3G12060.1 AT3G12080.1 AT3G12120.2
## [2251] AT3G12150.1 AT3G12200.2 AT3G12203.1 AT3G12220.1 AT3G12250.5
## [2256] AT3G12270.1 AT3G12320.1 AT3G12340.1 AT3G12345.1 AT3G12380.2
## [2261] AT3G12490.1 AT3G12500.1 AT3G12530.1 AT3G12580.1 AT3G12600.2
## [2266] AT3G12610.1 AT3G12620.2 AT3G12670.1 AT3G12690.3 AT3G12710.1
## [2271] AT3G12830.1 AT3G12870.1 AT3G12955.1 AT3G13000.1 AT3G13040.2
## [2276] AT3G13080.4 AT3G13110.1 AT3G13130.1 AT3G13226.1 AT3G13230.1
## [2281] AT3G13235.2 AT3G13275.1 AT3G13290.1 AT3G13300.2 AT3G13310.1
## [2286] AT3G13320.1 AT3G13350.1 AT3G13440.1 AT3G13460.1 AT3G13480.1
## [2291] AT3G13510.1 AT3G13530.1 AT3G13540.1 AT3G13550.1 AT3G13560.2
## [2296] AT3G13600.1 AT3G13620.1 AT3G13690.1 AT3G13750.1 AT3G13760.1
## [2301] AT3G13890.2 AT3G13920.4 AT3G13940.1 AT3G14050.1 AT3G14067.1
## [2306] AT3G14130.1 AT3G14170.1 AT3G14172.2 AT3G14190.1 AT3G14280.1
## [2311] AT3G14310.1 AT3G14440.1 AT3G14450.1 AT3G14460.1 AT3G14470.1
## [2316] AT3G14570.2 AT3G14590.3 AT3G14620.1 AT3G14640.1 AT3G14740.2
## [2321] AT3G14770.1 AT3G14810.2 AT3G14840.2 AT3G14880.2 AT3G14900.1
## [2326] AT3G14920.1 AT3G14940.1 AT3G14960.1 AT3G15030.3 AT3G15040.1
## [2331] AT3G15130.1 AT3G15140.1 AT3G15160.1 AT3G15220.1 AT3G15270.1
## [2336] AT3G15351.2 AT3G15353.1 AT3G15358.1 AT3G15360.1 AT3G15390.1
## [2341] AT3G15470.1 AT3G15510.1 AT3G15520.1 AT3G15540.1 AT3G15550.1
## [2346] AT3G15640.2 AT3G15660.2 AT3G15680.1 AT3G15880.2 AT3G15880.3
## [2351] AT3G15900.1 AT3G15940.2 AT3G16060.1 AT3G16150.1 AT3G16160.1
## [2356] AT3G16170.1 AT3G16210.1 AT3G16240.1 AT3G16260.1 AT3G16300.1
## [2361] AT3G16320.1 AT3G16490.1 AT3G16500.1 AT3G16520.2 AT3G16520.3
## [2366] AT3G16570.1 AT3G16630.2 AT3G16770.1 AT3G16800.1 AT3G16850.1
## [2371] AT3G16870.1 AT3G16910.1 AT3G16920.1 AT3G16940.1 AT3G16990.1
## [2376] AT3G17030.1 AT3G17130.1 AT3G17170.1 AT3G17180.1 AT3G17310.1
## [2381] AT3G17350.1 AT3G17360.1 AT3G17430.1 AT3G17440.1 AT3G17440.2
## [2386] AT3G17450.1 AT3G17580.1 AT3G17600.1 AT3G17611.1 AT3G17700.1
## [2391] AT3G17730.1 AT3G17860.1 AT3G17900.1 AT3G17910.1 AT3G17930.1
## [2396] AT3G18050.1 AT3G18060.1 AT3G18100.1 AT3G18150.1 AT3G18170.1
## [2401] AT3G18215.1 AT3G18280.1 AT3G18310.1 AT3G18410.2 AT3G18420.1
## [2406] AT3G18490.1 AT3G18500.3 AT3G18570.1 AT3G18620.1 AT3G18630.1
## [2411] AT3G18660.2 AT3G18690.1 AT3G18715.1 AT3G18730.1 AT3G18750.3
## [2416] AT3G18770.1 AT3G18800.1 AT3G18960.1 AT3G18990.1 AT3G19000.2
## [2421] AT3G19040.1 AT3G19050.1 AT3G19070.1 AT3G19184.1 AT3G19230.1
## [2426] AT3G19260.1 AT3G19270.1 AT3G19390.1 AT3G19420.1 AT3G19430.1
## [2431] AT3G19440.1 AT3G19450.1 AT3G19553.1 AT3G19580.2 AT3G19615.1
## [2436] AT3G19640.1 AT3G19650.1 AT3G19680.1 AT3G19850.1 AT3G19960.2
## [2441] AT3G19970.1 AT3G19990.1 AT3G20015.1 AT3G20140.1 AT3G20150.1
## [2446] AT3G20260.1 AT3G20290.2 AT3G20300.1 AT3G20420.1 AT3G20440.3
## [2451] AT3G20560.1 AT3G20570.1 AT3G20580.1 AT3G20600.1 AT3G20640.1
## [2456] AT3G20690.1 AT3G20770.1 AT3G20790.1 AT3G20830.1 AT3G20898.1
## [2461] AT3G21055.1 AT3G21090.1 AT3G21190.1 AT3G21260.3 AT3G21450.1
## [2466] AT3G21465.2 AT3G21510.1 AT3G21530.1 AT3G21540.1 AT3G21550.1
## [2471] AT3G21560.1 AT3G21600.2 AT3G21610.2 AT3G21630.1 AT3G21690.1
## [2476] AT3G21760.1 AT3G22070.1 AT3G22142.1 AT3G22160.1 AT3G22190.2
## [2481] AT3G22320.1 AT3G22370.1 AT3G22400.1 AT3G22420.2 AT3G22430.1
## [2486] AT3G22440.1 AT3G22450.1 AT3G22460.1 AT3G22530.1 AT3G22690.2
## [2491] AT3G22740.1 AT3G22780.1 AT3G22790.1 AT3G22830.1 AT3G22840.1
## [2496] AT3G22880.1 AT3G22910.1 AT3G22940.1 AT3G22970.1 AT3G23090.2
## [2501] AT3G23150.1 AT3G23200.1 AT3G23240.1 AT3G23255.1 AT3G23290.2
## [2506] AT3G23380.1 AT3G23400.1 AT3G23410.1 AT3G23490.1 AT3G23550.1
## [2511] AT3G23590.1 AT3G23600.1 AT3G23600.2 AT3G23640.2 AT3G23670.1
## [2516] AT3G23670.2 AT3G23690.1 AT3G23710.1 AT3G23730.1 AT3G23740.1
## [2521] AT3G23750.1 AT3G23805.1 AT3G23840.1 AT3G23880.1 AT3G23890.1
## [2526] AT3G23920.1 AT3G24040.1 AT3G24060.1 AT3G24090.1 AT3G24120.2
## [2531] AT3G24130.1 AT3G24240.1 AT3G24255.1 AT3G24320.1 AT3G24350.2
## [2536] AT3G24430.1 AT3G24440.1 AT3G24480.1 AT3G24503.1 AT3G24520.1
## [2541] AT3G24530.1 AT3G24550.1 AT3G24560.2 AT3G24600.1 AT3G24670.1
## [2546] AT3G24870.2 AT3G25030.2 AT3G25040.1 AT3G25070.1 AT3G25100.1
## [2551] AT3G25130.1 AT3G25140.1 AT3G25250.1 AT3G25270.1 AT3G25400.1
## [2556] AT3G25430.1 AT3G25440.2 AT3G25500.1 AT3G25510.1 AT3G25545.1
## [2561] AT3G25580.1 AT3G25690.2 AT3G25719.1 AT3G25800.2 AT3G25840.2
## [2566] AT3G25860.1 AT3G25920.1 AT3G25940.1 AT3G26040.1 AT3G26070.1
## [2571] AT3G26080.1 AT3G26090.1 AT3G26180.2 AT3G26250.1 AT3G26370.1
## [2576] AT3G26410.1 AT3G26430.1 AT3G26510.5 AT3G26540.1 AT3G26580.1
## [2581] AT3G26590.1 AT3G26600.1 AT3G26700.1 AT3G26780.1 AT3G27000.1
## [2586] AT3G27010.1 AT3G27030.1 AT3G27060.1 AT3G27090.1 AT3G27150.1
## [2591] AT3G27200.1 AT3G27210.1 AT3G27250.1 AT3G27300.3 AT3G27320.2
## [2596] AT3G27325.2 AT3G27330.1 AT3G27390.1 AT3G27400.1 AT3G27540.1
## [2601] AT3G27580.2 AT3G27640.1 AT3G27890.1 AT3G27900.1 AT3G27960.1
## [2606] AT3G28040.1 AT3G28050.1 AT3G28060.1 AT3G28410.1 AT3G28455.1
## [2611] AT3G28460.1 AT3G28480.2 AT3G28550.1 AT3G28580.1 AT3G28630.2
## [2616] AT3G28650.1 AT3G28700.1 AT3G28710.1 AT3G28770.1 AT3G28917.1
## [2621] AT3G28920.1 AT3G28980.1 AT3G29000.1 AT3G29060.1 AT3G29080.1
## [2626] AT3G29200.1 AT3G29260.1 AT3G29320.1 AT3G29770.1 AT3G29810.1
## [2631] AT3G30230.1 AT3G30300.1 AT3G31430.1 AT3G32940.1 AT3G33530.3
## [2636] AT3G42170.1 AT3G42640.1 AT3G42660.1 AT3G42670.1 AT3G42800.1
## [2641] AT3G42830.1 AT3G42860.1 AT3G43190.1 AT3G43300.2 AT3G43430.1
## [2646] AT3G43720.2 AT3G43790.2 AT3G43920.3 AT3G43970.1 AT3G44050.1
## [2651] AT3G44100.1 AT3G44150.1 AT3G44160.1 AT3G44200.1 AT3G44220.1
## [2656] AT3G44290.1 AT3G44340.2 AT3G44380.1 AT3G44400.2 AT3G44610.1
## [2661] AT3G44670.2 AT3G44735.2 AT3G44890.1 AT3G44940.1 AT3G44990.1
## [2666] AT3G45010.1 AT3G45130.1 AT3G45140.1 AT3G45230.1 AT3G45260.1
## [2671] AT3G45300.1 AT3G45400.1 AT3G45430.1 AT3G45660.1 AT3G45770.1
## [2676] AT3G45850.2 AT3G45900.1 AT3G46080.1 AT3G46230.1 AT3G46290.1
## [2681] AT3G46440.2 AT3G46490.1 AT3G46500.1 AT3G46510.1 AT3G46550.1
## [2686] AT3G46570.1 AT3G46620.1 AT3G46630.1 AT3G46710.1 AT3G46790.1
## [2691] AT3G46900.1 AT3G46920.1 AT3G46960.1 AT3G46970.1 AT3G46990.1
## [2696] AT3G47110.1 AT3G47160.2 AT3G47180.1 AT3G47420.1 AT3G47500.1
## [2701] AT3G47510.1 AT3G47550.6 AT3G47560.2 AT3G47570.1 AT3G47620.1
## [2706] AT3G47670.1 AT3G47720.1 AT3G47750.1 AT3G47800.1 AT3G47930.2
## [2711] AT3G47950.1 AT3G48040.1 AT3G48110.1 AT3G48150.1 AT3G48160.1
## [2716] AT3G48190.1 AT3G48200.1 AT3G48250.1 AT3G48280.1 AT3G48330.2
## [2721] AT3G48360.1 AT3G48410.1 AT3G48500.2 AT3G48520.1 AT3G48540.1
## [2726] AT3G48610.1 AT3G48660.1 AT3G48690.1 AT3G48750.1 AT3G48860.1
## [2731] AT3G48860.2 AT3G48890.1 AT3G49010.3 AT3G49170.1 AT3G49200.1
## [2736] AT3G49220.1 AT3G49250.1 AT3G49260.2 AT3G49290.2 AT3G49490.1
## [2741] AT3G49590.3 AT3G49600.1 AT3G49680.2 AT3G49720.2 AT3G49725.1
## [2746] AT3G49740.1 AT3G49750.1 AT3G49760.1 AT3G49780.1 AT3G49880.1
## [2751] AT3G49940.1 AT3G49990.1 AT3G50050.1 AT3G50120.1 AT3G50340.1
## [2756] AT3G50380.1 AT3G50410.1 AT3G50500.2 AT3G50520.1 AT3G50530.2
## [2761] AT3G50560.1 AT3G50590.1 AT3G50620.1 AT3G50660.1 AT3G50770.1
## [2766] AT3G50780.1 AT3G50810.1 AT3G50830.1 AT3G50860.1 AT3G50930.1
## [2771] AT3G51000.1 AT3G51030.1 AT3G51150.2 AT3G51160.1 AT3G51220.1
## [2776] AT3G51280.1 AT3G51290.1 AT3G51290.2 AT3G51325.1 AT3G51330.1
## [2781] AT3G51430.2 AT3G51450.1 AT3G51470.1 AT3G51530.1 AT3G51550.1
## [2786] AT3G51630.2 AT3G51660.1 AT3G51670.1 AT3G51710.1 AT3G51740.1
## [2791] AT3G51780.1 AT3G51850.1 AT3G51860.1 AT3G51930.1 AT3G51950.2
## [2796] AT3G51990.1 AT3G52010.1 AT3G52070.1 AT3G52180.1 AT3G52190.1
## [2801] AT3G52240.1 AT3G52280.2 AT3G52310.1 AT3G52330.1 AT3G52380.1
## [2806] AT3G52430.1 AT3G52480.1 AT3G52490.1 AT3G52500.1 AT3G52710.1
## [2811] AT3G52730.1 AT3G52770.1 AT3G52780.1 AT3G52790.1 AT3G52870.1
## [2816] AT3G52930.1 AT3G52970.1 AT3G52990.1 AT3G53140.1 AT3G53190.1
## [2821] AT3G53260.1 AT3G53320.1 AT3G53340.1 AT3G53380.1 AT3G53400.1
## [2826] AT3G53520.1 AT3G53520.3 AT3G53520.4 AT3G53540.1 AT3G53640.1
## [2831] AT3G53690.1 AT3G53750.1 AT3G53780.2 AT3G53950.1 AT3G53960.1
## [2836] AT3G53990.1 AT3G54000.1 AT3G54030.1 AT3G54040.1 AT3G54060.2
## [2841] AT3G54090.1 AT3G54120.1 AT3G54140.1 AT3G54200.1 AT3G54230.2
## [2846] AT3G54250.1 AT3G54260.1 AT3G54340.1 AT3G54390.1 AT3G54450.1
## [2851] AT3G54540.1 AT3G54610.1 AT3G54630.1 AT3G54650.1 AT3G54700.1
## [2856] AT3G54720.1 AT3G54770.1 AT3G54790.2 AT3G54810.1 AT3G54850.1
## [2861] AT3G54880.1 AT3G54950.1 AT3G54970.2 AT3G55010.2 AT3G55060.1
## [2866] AT3G55080.1 AT3G55120.1 AT3G55160.1 AT3G55250.1 AT3G55260.1
## [2871] AT3G55270.1 AT3G55340.1 AT3G55350.1 AT3G55390.1 AT3G55400.1
## [2876] AT3G55420.1 AT3G55520.1 AT3G55570.1 AT3G55580.1 AT3G55620.1
## [2881] AT3G55630.1 AT3G55700.1 AT3G55760.3 AT3G55770.7 AT3G55850.2
## [2886] AT3G55880.2 AT3G55950.1 AT3G55960.1 AT3G55990.1 AT3G56010.1
## [2891] AT3G56070.2 AT3G56130.4 AT3G56140.1 AT3G56170.1 AT3G56190.2
## [2896] AT3G56240.1 AT3G56250.1 AT3G56360.1 AT3G56370.1 AT3G56430.1
## [2901] AT3G56480.1 AT3G56570.1 AT3G56590.2 AT3G56630.1 AT3G56640.1
## [2906] AT3G56710.1 AT3G56720.3 AT3G56750.1 AT3G56810.1 AT3G56850.1
## [2911] AT3G56870.1 AT3G56880.1 AT3G56930.2 AT3G57000.1 AT3G57040.1
## [2916] AT3G57060.2 AT3G57190.1 AT3G57380.1 AT3G57410.1 AT3G57520.1
## [2921] AT3G57530.1 AT3G57540.1 AT3G57550.2 AT3G57570.2 AT3G57650.1
## [2926] AT3G57670.1 AT3G57800.2 AT3G57810.3 AT3G57830.1 AT3G57880.1
## [2931] AT3G58060.1 AT3G58180.1 AT3G58220.2 AT3G58460.2 AT3G58470.1
## [2936] AT3G58520.1 AT3G58630.1 AT3G58720.2 AT3G58730.1 AT3G58770.1
## [2941] AT3G58790.1 AT3G58800.1 AT3G58810.2 AT3G59030.1 AT3G59110.1
## [2946] AT3G59120.1 AT3G59140.1 AT3G59380.1 AT3G59390.1 AT3G59570.1
## [2951] AT3G59670.1 AT3G59690.1 AT3G59760.3 AT3G59820.2 AT3G60000.2
## [2956] AT3G60160.1 AT3G60190.1 AT3G60370.1 AT3G60380.1 AT3G60470.1
## [2961] AT3G60490.1 AT3G60550.1 AT3G60580.1 AT3G60660.1 AT3G60750.2
## [2966] AT3G61040.1 AT3G61050.2 AT3G61220.2 AT3G61390.2 AT3G61415.2
## [2971] AT3G61440.1 AT3G61460.1 AT3G61480.1 AT3G61490.3 AT3G61640.1
## [2976] AT3G61670.1 AT3G61730.1 AT3G61740.2 AT3G61750.1 AT3G61770.1
## [2981] AT3G61780.1 AT3G61790.1 AT3G61800.1 AT3G61870.1 AT3G61890.1
## [2986] AT3G61910.1 AT3G61920.1 AT3G62020.1 AT3G62040.1 AT3G62110.1
## [2991] AT3G62150.1 AT3G62260.1 AT3G62290.3 AT3G62300.2 AT3G62420.1
## [2996] AT3G62450.1 AT3G62550.1 AT3G62630.1 AT3G62650.1 AT3G62660.1
## [3001] AT3G62830.2 AT3G62910.1 AT3G63010.1 AT3G63130.2 AT3G63200.1
## [3006] AT3G63280.2 AT3G63290.1 AT3G63370.1 AT3G63380.1 AT3G63430.1
## [3011] AT3G63440.1 AT3G63460.1 AT3G63470.1 AT3G63530.2 AT4G00110.1
## [3016] AT4G00150.1 AT4G00238.1 AT4G00240.1 AT4G00290.1 AT4G00300.1
## [3021] AT4G00330.1 AT4G00355.4 AT4G00440.3 AT4G00490.1 AT4G00530.1
## [3026] AT4G00560.2 AT4G00740.1 AT4G00750.1 AT4G00755.2 AT4G00830.4
## [3031] AT4G00870.1 AT4G00880.1 AT4G01037.1 AT4G01050.1 AT4G01070.1
## [3036] AT4G01100.2 AT4G01170.1 AT4G01210.1 AT4G01220.2 AT4G01250.1
## [3041] AT4G01270.1 AT4G01370.1 AT4G01400.2 AT4G01440.1 AT4G01460.1
## [3046] AT4G01550.1 AT4G01575.1 AT4G01600.2 AT4G01670.1 AT4G01680.2
## [3051] AT4G01710.1 AT4G01730.1 AT4G01800.2 AT4G01810.1 AT4G01850.2
## [3056] AT4G01970.1 AT4G01995.1 AT4G02010.1 AT4G02070.2 AT4G02080.1
## [3061] AT4G02090.1 AT4G02120.1 AT4G02290.1 AT4G02340.1 AT4G02380.1
## [3066] AT4G02400.1 AT4G02500.1 AT4G02530.1 AT4G02550.4 AT4G02570.4
## [3071] AT4G02725.1 AT4G02800.1 AT4G02820.1 AT4G02880.2 AT4G02980.1
## [3076] AT4G03010.1 AT4G03030.1 AT4G03070.1 AT4G03100.1 AT4G03115.1
## [3081] AT4G03200.2 AT4G03210.2 AT4G03230.1 AT4G03270.1 AT4G03280.2
## [3086] AT4G03320.1 AT4G03410.2 AT4G03440.1 AT4G03490.2 AT4G03500.1
## [3091] AT4G03510.2 AT4G03550.1 AT4G03950.1 AT4G03960.1 AT4G04020.1
## [3096] AT4G04110.1 AT4G04180.1 AT4G04350.1 AT4G04460.2 AT4G04470.1
## [3101] AT4G04614.1 AT4G04630.1 AT4G04720.1 AT4G04730.1 AT4G04780.1
## [3106] AT4G04790.1 AT4G04850.2 AT4G04880.1 AT4G04900.1 AT4G04910.1
## [3111] AT4G04920.1 AT4G04930.1 AT4G04940.1 AT4G04950.1 AT4G04955.1
## [3116] AT4G04970.1 AT4G05000.2 AT4G05020.2 AT4G05150.1 AT4G06598.1
## [3121] AT4G06634.3 AT4G07960.1 AT4G08160.1 AT4G08180.2 AT4G08290.1
## [3126] AT4G08455.1 AT4G08470.1 AT4G08480.1 AT4G08500.1 AT4G08630.1
## [3131] AT4G08685.1 AT4G08810.1 AT4G08850.2 AT4G08920.1 AT4G08950.1
## [3136] AT4G09020.1 AT4G09160.1 AT4G09320.1 AT4G09350.1 AT4G09430.1
## [3141] AT4G09650.1 AT4G09680.1 AT4G09730.1 AT4G09775.1 AT4G09810.1
## [3146] AT4G09820.1 AT4G09890.1 AT4G10040.1 AT4G10250.1 AT4G10270.1
## [3151] AT4G10300.1 AT4G10340.1 AT4G10380.1 AT4G10390.1 AT4G10430.3
## [3156] AT4G10620.1 AT4G10630.1 AT4G10790.1 AT4G10810.1 AT4G10840.2
## [3161] AT4G10955.2 AT4G10960.1 AT4G11000.1 AT4G11090.1 AT4G11110.1
## [3166] AT4G11120.1 AT4G11170.1 AT4G11220.1 AT4G11260.1 AT4G11380.2
## [3171] AT4G11430.1 AT4G11450.1 AT4G11490.1 AT4G11600.1 AT4G11650.1
## [3176] AT4G11660.1 AT4G11670.1 AT4G11800.1 AT4G11860.1 AT4G11880.1
## [3181] AT4G12020.3 AT4G12040.2 AT4G12070.1 AT4G12080.1 AT4G12110.1
## [3186] AT4G12290.1 AT4G12330.1 AT4G12350.1 AT4G12390.1 AT4G12420.2
## [3191] AT4G12440.1 AT4G12490.1 AT4G12500.1 AT4G12510.1 AT4G12540.1
## [3196] AT4G12560.2 AT4G12590.1 AT4G12620.1 AT4G12650.1 AT4G12730.1
## [3201] AT4G12760.1 AT4G12770.2 AT4G12980.1 AT4G13030.2 AT4G13130.1
## [3206] AT4G13150.1 AT4G13180.1 AT4G13195.1 AT4G13250.1 AT4G13330.1
## [3211] AT4G13340.1 AT4G13345.2 AT4G13370.1 AT4G13390.1 AT4G13395.1
## [3216] AT4G13460.2 AT4G13500.1 AT4G13510.1 AT4G13550.1 AT4G13630.2
## [3221] AT4G13700.1 AT4G13730.3 AT4G13750.1 AT4G13870.2 AT4G13930.1
## [3226] AT4G13940.3 AT4G13990.1 AT4G14030.2 AT4G14080.1 AT4G14130.1
## [3231] AT4G14180.1 AT4G14220.1 AT4G14310.1 AT4G14330.1 AT4G14350.2
## [3236] AT4G14360.2 AT4G14450.1 AT4G14570.1 AT4G14650.1 AT4G14740.3
## [3241] AT4G14746.1 AT4G14750.1 AT4G14850.1 AT4G14860.1 AT4G14960.2
## [3246] AT4G15080.1 AT4G15140.1 AT4G15200.2 AT4G15248.1 AT4G15470.1
## [3251] AT4G15480.1 AT4G15540.1 AT4G15550.1 AT4G15560.1 AT4G15563.1
## [3256] AT4G15610.1 AT4G15790.1 AT4G15800.1 AT4G15820.1 AT4G15830.1
## [3261] AT4G15850.1 AT4G15910.1 AT4G15920.1 AT4G16070.2 AT4G16120.1
## [3266] AT4G16130.1 AT4G16160.2 AT4G16180.2 AT4G16340.1 AT4G16360.2
## [3271] AT4G16380.2 AT4G16480.1 AT4G16490.1 AT4G16520.2 AT4G16563.1
## [3276] AT4G16660.1 AT4G16765.2 AT4G16860.1 AT4G16890.1 AT4G16980.1
## [3281] AT4G17000.1 AT4G17020.3 AT4G17030.1 AT4G17040.1 AT4G17090.1
## [3286] AT4G17150.1 AT4G17170.1 AT4G17180.1 AT4G17220.1 AT4G17240.2
## [3291] AT4G17245.1 AT4G17260.1 AT4G17280.1 AT4G17300.1 AT4G17350.1
## [3296] AT4G17440.2 AT4G17500.1 AT4G17570.2 AT4G17570.3 AT4G17610.1
## [3301] AT4G17615.2 AT4G17720.1 AT4G17770.1 AT4G17790.1 AT4G17940.1
## [3306] AT4G17980.1 AT4G18020.6 AT4G18030.1 AT4G18070.4 AT4G18210.1
## [3311] AT4G18250.1 AT4G18260.1 AT4G18270.1 AT4G18380.2 AT4G18530.1
## [3316] AT4G18593.1 AT4G18640.1 AT4G18670.1 AT4G18700.1 AT4G18750.1
## [3321] AT4G18760.1 AT4G18780.1 AT4G18810.2 AT4G18870.1 AT4G18880.1
## [3326] AT4G18910.1 AT4G18950.1 AT4G19006.1 AT4G19010.1 AT4G19020.1
## [3331] AT4G19040.2 AT4G19050.1 AT4G19090.1 AT4G19100.1 AT4G19110.2
## [3336] AT4G19130.1 AT4G19390.1 AT4G19420.1 AT4G19660.1 AT4G19710.2
## [3341] AT4G19810.1 AT4G19850.1 AT4G20050.2 AT4G20060.1 AT4G20070.1
## [3346] AT4G20140.1 AT4G20200.1 AT4G20260.4 AT4G20270.1 AT4G20410.1
## [3351] AT4G20740.1 AT4G20910.2 AT4G20930.1 AT4G20940.1 AT4G21070.1
## [3356] AT4G21105.1 AT4G21160.4 AT4G21170.1 AT4G21190.1 AT4G21270.1
## [3361] AT4G21340.1 AT4G21380.1 AT4G21390.1 AT4G21470.1 AT4G21510.1
## [3366] AT4G21520.1 AT4G21530.1 AT4G21580.3 AT4G21620.2 AT4G21670.1
## [3371] AT4G21740.1 AT4G21860.2 AT4G21860.3 AT4G21870.1 AT4G21910.4
## [3376] AT4G21960.1 AT4G21970.1 AT4G22010.1 AT4G22130.2 AT4G22140.1
## [3381] AT4G22190.1 AT4G22200.1 AT4G22220.1 AT4G22250.1 AT4G22270.1
## [3386] AT4G22290.1 AT4G22310.1 AT4G22320.2 AT4G22370.1 AT4G22505.1
## [3391] AT4G22530.1 AT4G22540.1 AT4G22580.1 AT4G22620.1 AT4G22730.1
## [3396] AT4G22740.2 AT4G22756.1 AT4G22840.1 AT4G22900.1 AT4G22920.1
## [3401] AT4G22930.1 AT4G22960.1 AT4G22990.2 AT4G23070.1 AT4G23140.2
## [3406] AT4G23160.1 AT4G23430.3 AT4G23510.1 AT4G23540.1 AT4G23570.3
## [3411] AT4G23630.1 AT4G23640.1 AT4G23690.1 AT4G23720.1 AT4G23740.1
## [3416] AT4G23760.1 AT4G23800.2 AT4G23820.1 AT4G23840.1 AT4G23920.1
## [3421] AT4G23980.1 AT4G23990.1 AT4G24020.1 AT4G24090.1 AT4G24120.1
## [3426] AT4G24130.1 AT4G24170.1 AT4G24175.1 AT4G24180.1 AT4G24204.3
## [3431] AT4G24230.6 AT4G24240.1 AT4G24280.1 AT4G24290.2 AT4G24380.2
## [3436] AT4G24520.2 AT4G24550.3 AT4G24580.1 AT4G24610.2 AT4G24680.1
## [3441] AT4G24760.1 AT4G24770.1 AT4G24780.2 AT4G24800.3 AT4G24805.1
## [3446] AT4G24820.2 AT4G24840.1 AT4G24930.1 AT4G24990.1 AT4G25030.2
## [3451] AT4G25050.2 AT4G25170.2 AT4G25310.1 AT4G25370.1 AT4G25420.1
## [3456] AT4G25430.1 AT4G25490.1 AT4G25540.1 AT4G25550.1 AT4G25570.1
## [3461] AT4G25620.1 AT4G25650.2 AT4G25700.1 AT4G25700.2 AT4G25730.1
## [3466] AT4G25800.2 AT4G25810.1 AT4G26020.2 AT4G26090.1 AT4G26150.1
## [3471] AT4G26220.1 AT4G26370.1 AT4G26530.2 AT4G26550.1 AT4G26570.2
## [3476] AT4G26590.1 AT4G26620.1 AT4G26630.2 AT4G26650.2 AT4G26690.1
## [3481] AT4G26700.3 AT4G26780.1 AT4G26860.2 AT4G27010.2 AT4G27020.1
## [3486] AT4G27060.1 AT4G27070.1 AT4G27130.1 AT4G27180.1 AT4G27190.1
## [3491] AT4G27220.1 AT4G27250.1 AT4G27250.2 AT4G27270.1 AT4G27280.1
## [3496] AT4G27290.1 AT4G27310.1 AT4G27340.1 AT4G27350.1 AT4G27390.1
## [3501] AT4G27410.3 AT4G27430.2 AT4G27435.1 AT4G27450.1 AT4G27460.1
## [3506] AT4G27470.1 AT4G27490.1 AT4G27520.1 AT4G27570.1 AT4G27660.1
## [3511] AT4G27670.1 AT4G27720.1 AT4G27745.1 AT4G27810.1 AT4G27840.1
## [3516] AT4G27880.1 AT4G28220.1 AT4G28230.1 AT4G28240.1 AT4G28290.1
## [3521] AT4G28310.1 AT4G28370.1 AT4G28380.1 AT4G28400.1 AT4G28430.1
## [3526] AT4G28500.1 AT4G28556.1 AT4G28570.1 AT4G28660.2 AT4G28740.1
## [3531] AT4G28760.2 AT4G28770.2 AT4G28950.1 AT4G29070.2 AT4G29090.1
## [3536] AT4G29110.1 AT4G29130.1 AT4G29190.1 AT4G29220.1 AT4G29230.1
## [3541] AT4G29270.1 AT4G29310.1 AT4G29400.1 AT4G29560.1 AT4G29680.1
## [3546] AT4G29720.1 AT4G29750.1 AT4G29820.1 AT4G29850.1 AT4G29900.1
## [3551] AT4G30150.1 AT4G30160.2 AT4G30190.2 AT4G30230.1 AT4G30380.1
## [3556] AT4G30410.1 AT4G30490.1 AT4G30510.1 AT4G30690.2 AT4G30710.2
## [3561] AT4G30720.1 AT4G30780.1 AT4G30810.1 AT4G30860.1 AT4G30935.1
## [3566] AT4G30960.1 AT4G30990.2 AT4G31140.1 AT4G31180.2 AT4G31210.1
## [3571] AT4G31240.2 AT4G31270.1 AT4G31310.1 AT4G31410.2 AT4G31480.2
## [3576] AT4G31540.1 AT4G31550.2 AT4G31560.1 AT4G31570.1 AT4G31600.1
## [3581] AT4G31690.1 AT4G31810.1 AT4G31820.1 AT4G31850.1 AT4G31890.2
## [3586] AT4G31940.1 AT4G31970.1 AT4G32010.1 AT4G32050.1 AT4G32060.2
## [3591] AT4G32120.1 AT4G32140.1 AT4G32190.1 AT4G32270.1 AT4G32272.2
## [3596] AT4G32300.1 AT4G32320.1 AT4G32330.3 AT4G32350.1 AT4G32400.1
## [3601] AT4G32410.1 AT4G32420.4 AT4G32480.1 AT4G32510.1 AT4G32530.2
## [3606] AT4G32590.4 AT4G32600.1 AT4G32640.2 AT4G32700.2 AT4G32730.2
## [3611] AT4G32760.2 AT4G32790.1 AT4G32900.2 AT4G32940.1 AT4G33000.3
## [3616] AT4G33010.2 AT4G33040.1 AT4G33070.1 AT4G33080.2 AT4G33090.1
## [3621] AT4G33160.1 AT4G33180.1 AT4G33220.1 AT4G33270.1 AT4G33280.1
## [3626] AT4G33300.2 AT4G33330.1 AT4G33380.2 AT4G33420.1 AT4G33440.1
## [3631] AT4G33495.1 AT4G33500.1 AT4G33510.2 AT4G33520.1 AT4G33540.1
## [3636] AT4G33550.1 AT4G33580.2 AT4G33670.1 AT4G33740.3 AT4G33820.1
## [3641] AT4G33910.1 AT4G33920.1 AT4G33945.1 AT4G34050.2 AT4G34120.1
## [3646] AT4G34160.1 AT4G34200.1 AT4G34215.2 AT4G34230.1 AT4G34310.1
## [3651] AT4G34450.1 AT4G34480.1 AT4G34490.1 AT4G34500.1 AT4G34590.1
## [3656] AT4G34640.1 AT4G34700.1 AT4G34720.1 AT4G34740.1 AT4G34760.1
## [3661] AT4G34830.1 AT4G34860.2 AT4G34880.1 AT4G34950.1 AT4G34970.1
## [3666] AT4G34980.1 AT4G35040.1 AT4G35090.2 AT4G35100.2 AT4G35220.1
## [3671] AT4G35230.1 AT4G35240.2 AT4G35290.1 AT4G35300.4 AT4G35320.1
## [3676] AT4G35335.1 AT4G35410.1 AT4G35450.5 AT4G35470.1 AT4G35510.1
## [3681] AT4G35580.3 AT4G35630.1 AT4G35730.1 AT4G35750.1 AT4G35790.1
## [3686] AT4G35880.1 AT4G35900.1 AT4G35920.2 AT4G35930.1 AT4G35987.1
## [3691] AT4G36010.2 AT4G36020.1 AT4G36220.1 AT4G36360.1 AT4G36380.1
## [3696] AT4G36530.2 AT4G36610.1 AT4G36650.2 AT4G36660.1 AT4G36670.1
## [3701] AT4G36710.1 AT4G36740.1 AT4G36790.1 AT4G36850.1 AT4G36870.2
## [3706] AT4G36890.1 AT4G36945.1 AT4G36950.1 AT4G37000.1 AT4G37080.3
## [3711] AT4G37100.1 AT4G37110.1 AT4G37180.1 AT4G37300.1 AT4G37340.1
## [3716] AT4G37360.1 AT4G37430.1 AT4G37450.1 AT4G37470.1 AT4G37560.1
## [3721] AT4G37650.1 AT4G37750.1 AT4G37890.1 AT4G37920.1 AT4G38040.1
## [3726] AT4G38050.1 AT4G38170.1 AT4G38180.1 AT4G38200.1 AT4G38220.2
## [3731] AT4G38260.1 AT4G38270.2 AT4G38380.1 AT4G38460.1 AT4G38470.1
## [3736] AT4G38495.1 AT4G38540.1 AT4G38620.1 AT4G38650.1 AT4G38660.1
## [3741] AT4G38680.1 AT4G38690.1 AT4G38710.2 AT4G38810.2 AT4G39010.1
## [3746] AT4G39050.1 AT4G39070.1 AT4G39080.1 AT4G39110.1 AT4G39130.1
## [3751] AT4G39160.2 AT4G39170.1 AT4G39220.1 AT4G39230.1 AT4G39350.1
## [3756] AT4G39370.3 AT4G39410.1 AT4G39460.2 AT4G39630.1 AT4G39660.1
## [3761] AT4G39670.1 AT4G39700.1 AT4G39790.1 AT4G39820.1 AT4G39860.1
## [3766] AT4G39860.2 AT4G39955.1 AT4G40030.2 AT4G40045.1 AT4G40080.1
## [3771] AT5G01030.2 AT5G01090.1 AT5G01180.1 AT5G01260.2 AT5G01280.1
## [3776] AT5G01320.1 AT5G01360.1 AT5G01410.1 AT5G01520.1 AT5G01580.1
## [3781] AT5G01620.3 AT5G01660.1 AT5G01710.1 AT5G01720.1 AT5G01840.1
## [3786] AT5G01850.1 AT5G01920.1 AT5G01990.1 AT5G02010.1 AT5G02120.1
## [3791] AT5G02180.1 AT5G02220.1 AT5G02230.2 AT5G02250.1 AT5G02270.2
## [3796] AT5G02420.1 AT5G02440.1 AT5G02460.1 AT5G02490.1 AT5G02600.1
## [3801] AT5G02640.1 AT5G02700.1 AT5G02780.1 AT5G02780.2 AT5G02800.1
## [3806] AT5G02850.1 AT5G02880.1 AT5G02910.2 AT5G03040.3 AT5G03140.1
## [3811] AT5G03150.1 AT5G03160.1 AT5G03170.1 AT5G03240.3 AT5G03250.1
## [3816] AT5G03300.1 AT5G03330.2 AT5G03360.2 AT5G03420.1 AT5G03435.1
## [3821] AT5G03490.1 AT5G03510.1 AT5G03560.1 AT5G03720.1 AT5G03740.1
## [3826] AT5G03760.1 AT5G03870.1 AT5G03980.1 AT5G03990.1 AT5G04020.1
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## [4781] AT5G60150.1 AT5G60200.1 AT5G60210.2 AT5G60230.2 AT5G60370.1
## [4786] AT5G60390.3 AT5G60410.5 AT5G60490.1 AT5G60540.1 AT5G60580.4
## [4791] AT5G60640.3 AT5G60660.1 AT5G60710.1 AT5G60720.1 AT5G60760.1
## [4796] AT5G60800.2 AT5G60840.1 AT5G60860.1 AT5G60870.1 AT5G60910.1
## [4801] AT5G60920.1 AT5G60930.1 AT5G60980.2 AT5G61240.2 AT5G61250.1
## [4806] AT5G61290.1 AT5G61340.1 AT5G61410.2 AT5G61430.1 AT5G61460.1
## [4811] AT5G61480.1 AT5G61530.3 AT5G61670.2 AT5G61790.1 AT5G61840.1
## [4816] AT5G61920.2 AT5G62060.1 AT5G62070.1 AT5G62100.2 AT5G62150.1
## [4821] AT5G62180.1 AT5G62190.1 AT5G62250.1 AT5G62290.2 AT5G62370.1
## [4826] AT5G62410.1 AT5G62460.1 AT5G62550.1 AT5G62570.2 AT5G62650.1
## [4831] AT5G62670.1 AT5G62680.1 AT5G62700.1 AT5G62710.1 AT5G62740.1
## [4836] AT5G62770.1 AT5G62790.2 AT5G62820.1 AT5G62880.1 AT5G62960.1
## [4841] AT5G62990.1 AT5G63040.2 AT5G63270.1 AT5G63380.1 AT5G63400.1
## [4846] AT5G63400.2 AT5G63420.1 AT5G63480.1 AT5G63490.1 AT5G63560.1
## [4851] AT5G63670.2 AT5G63710.1 AT5G63720.1 AT5G63770.1 AT5G63830.1
## [4856] AT5G63860.1 AT5G63910.1 AT5G63920.1 AT5G64030.1 AT5G64040.1
## [4861] AT5G64050.1 AT5G64090.1 AT5G64130.3 AT5G64170.2 AT5G64200.2
## [4866] AT5G64210.1 AT5G64230.1 AT5G64250.2 AT5G64260.1 AT5G64330.2
## [4871] AT5G64340.1 AT5G64360.4 AT5G64370.1 AT5G64380.1 AT5G64400.2
## [4876] AT5G64410.1 AT5G64440.1 AT5G64530.1 AT5G64570.1 AT5G64620.1
## [4881] AT5G64660.1 AT5G64667.1 AT5G64680.3 AT5G64700.1 AT5G64760.2
## [4886] AT5G64800.1 AT5G64813.1 AT5G64840.1 AT5G64860.1 AT5G64960.2
## [4891] AT5G65160.1 AT5G65207.1 AT5G65210.6 AT5G65270.1 AT5G65320.1
## [4896] AT5G65360.1 AT5G65460.1 AT5G65490.1 AT5G65495.1 AT5G65530.1
## [4901] AT5G65560.1 AT5G65640.1 AT5G65640.2 AT5G65700.2 AT5G65710.1
## [4906] AT5G65720.1 AT5G65800.1 AT5G65930.3 AT5G65970.1 AT5G66060.1
## [4911] AT5G66070.2 AT5G66120.2 AT5G66130.1 AT5G66180.1 AT5G66230.1
## [4916] AT5G66240.3 AT5G66320.2 AT5G66330.1 AT5G66410.1 AT5G66420.2
## [4921] AT5G66440.1 AT5G66460.1 AT5G66520.1 AT5G66540.1 AT5G66550.1
## [4926] AT5G66600.4 AT5G66770.1 AT5G66780.1 AT5G66910.1 AT5G66920.1
## [4931] AT5G67030.1 AT5G67030.2 AT5G67050.1 AT5G67090.1 AT5G67100.1
## [4936] AT5G67140.1 AT5G67170.2 AT5G67210.1 AT5G67230.1 AT5G67240.1
## [4941] AT5G67250.1 AT5G67270.1 AT5G67290.1 AT5G67300.1 AT5G67330.1
## [4946] AT5G67360.1 AT5G67370.1 AT5G67470.1 AT5G67480.2 AT5G67500.2
## [4951] AT5G67540.1 AT5G67570.1 AT5G67610.2 AT5G67620.1 ATCG00080.1
## [4956] ATCG00120.1 ATCG00150.1 ATCG00190.1 ATCG00270.1 ATCG00280.1
## [4961] ATCG00350.1 ATCG00430.1 ATCG00480.1 ATCG00670.1 ATCG01110.1
## [4966] ATCG01280.1 ATCG01310.1 ATMG00160.1 ATMG00510.1 ATMG00810.1
## [4971] ATMG01250.1 ATMG01320.1
## 4972 Levels: AT1G01060.4 AT1G01090.1 AT1G01200.1 ... ATMG01320.1
# How many unique genes are there
length(unique(df$V1))
## [1] 4972
# check the summary, what is the maximum amount of samples per gene?
summary(df)
## V1 V2
## AT5G36930.2 : 38 Min. :-1.000
## AT1G69550.1 : 19 1st Qu.:-1.000
## AT3G14840.2 : 15 Median :-1.000
## AT4G21530.1 : 15 Mean :-0.017
## AT5G17680.1 : 15 3rd Qu.: 1.000
## AT1G27170.2 : 14 Max. : 1.000
## (Other) :7044
# check the "worst" case:
df[df$V1 == "AT5G36930.2 ", ]
## V1 V2
## 6234 AT5G36930.2 1
## 6235 AT5G36930.2 1
## 6236 AT5G36930.2 1
## 6237 AT5G36930.2 1
## 6238 AT5G36930.2 -1
## 6239 AT5G36930.2 1
## 6240 AT5G36930.2 1
## 6241 AT5G36930.2 1
## 6242 AT5G36930.2 1
## 6243 AT5G36930.2 -1
## 6244 AT5G36930.2 -1
## 6245 AT5G36930.2 1
## 6246 AT5G36930.2 1
## 6247 AT5G36930.2 1
## 6248 AT5G36930.2 1
## 6249 AT5G36930.2 1
## 6250 AT5G36930.2 1
## 6251 AT5G36930.2 1
## 6252 AT5G36930.2 -1
## 6253 AT5G36930.2 1
## 6254 AT5G36930.2 1
## 6255 AT5G36930.2 -1
## 6256 AT5G36930.2 -1
## 6257 AT5G36930.2 -1
## 6258 AT5G36930.2 -1
## 6259 AT5G36930.2 1
## 6260 AT5G36930.2 1
## 6261 AT5G36930.2 1
## 6262 AT5G36930.2 -1
## 6263 AT5G36930.2 1
## 6264 AT5G36930.2 1
## 6265 AT5G36930.2 1
## 6266 AT5G36930.2 1
## 6267 AT5G36930.2 1
## 6268 AT5G36930.2 1
## 6269 AT5G36930.2 1
## 6270 AT5G36930.2 1
## 6271 AT5G36930.2 1
Now we have to develop a little algorithm:
how many unique values are there for each gene?
For the cases where there are more than one value for a gene, keep only the samples that have the value “+1”
# Using plyr to loop over all genes.
# Split the data df by the genes
# then process each gene,
# return a dataframe for all genes
# if you don't like plyr you can use split and apply of course
# install.packages("plyr")
library(plyr)
# using ddply, as we provide a dataframe as input, and we want to have a dataframe as a result.
# using if/else to check the attributes of each gene and act accordingly
# plyr takes care that our resulting data get merged back into a dataframe
out <- ddply(df,
.(V1), # this tells plyr to split by "V1"
function (x) {
# first, counting the unique values per gene
my.unique <- length(unique(x$V2))
# using if/else
if (my.unique == 1) {
# in case there is only one unique value,
# we do not do anything,
# just returning the data as they are
return(x)}
else {
# in case there is not only one unique value,
# we get rid of the samples with "-1",
# using a square bracket selection,
# and return the modified data
y <- x[x$V2 == 1, ]
return(y)}
}
)
# checking the result of our algorithm
summary(out)
## V1 V2
## AT5G36930.2 : 29 Min. :-1.0000
## AT1G69550.1 : 16 1st Qu.:-1.0000
## AT3G14840.2 : 15 Median : 1.0000
## AT4G21530.1 : 15 Mean : 0.0397
## AT4G23540.1 : 14 3rd Qu.: 1.0000
## AT1G27170.2 : 13 Max. : 1.0000
## (Other) :6667
# checking the "worst" case gene,
# and, success!!
out[out$V1 == "AT5G36930.2 ", ]
## V1 V2
## 5892 AT5G36930.2 1
## 5893 AT5G36930.2 1
## 5894 AT5G36930.2 1
## 5895 AT5G36930.2 1
## 5896 AT5G36930.2 1
## 5897 AT5G36930.2 1
## 5898 AT5G36930.2 1
## 5899 AT5G36930.2 1
## 5900 AT5G36930.2 1
## 5901 AT5G36930.2 1
## 5902 AT5G36930.2 1
## 5903 AT5G36930.2 1
## 5904 AT5G36930.2 1
## 5905 AT5G36930.2 1
## 5906 AT5G36930.2 1
## 5907 AT5G36930.2 1
## 5908 AT5G36930.2 1
## 5909 AT5G36930.2 1
## 5910 AT5G36930.2 1
## 5911 AT5G36930.2 1
## 5912 AT5G36930.2 1
## 5913 AT5G36930.2 1
## 5914 AT5G36930.2 1
## 5915 AT5G36930.2 1
## 5916 AT5G36930.2 1
## 5917 AT5G36930.2 1
## 5918 AT5G36930.2 1
## 5919 AT5G36930.2 1
## 5920 AT5G36930.2 1
Enjoy!