# Set various values needed, including names of files and FIPS codes for New Hampshire and South Carolina
nhdatafile <- "NHD2016.xlsx"
nhdatafilecsv <- "NHD2016.csv"
usshapefile <- "cb_2014_us_county_5m/cb_2014_us_county_5m.shp"
nhfipscode <- "33"
scdatafile <- "SCGOP2016.csv"
scfipscode <- "45"
#install.packages("tmap")
#install.packages("tmaptools")
#install.packages("sf")
#install.packages("leaflet")
#install.packages("sf")
#install.packages("raster")
#install.packages("rgdal")
#install.packages("shiny") 
#install.packages("urltools")
#install.packages("htmlwidgets")
library("dplyr")
## 
## Attaching package: 'dplyr'
## The following objects are masked from 'package:stats':
## 
##     filter, lag
## The following objects are masked from 'package:base':
## 
##     intersect, setdiff, setequal, union
library("tmap")
library("tmaptools")
library("sf")
## Linking to GEOS 3.9.0, GDAL 3.2.1, PROJ 7.2.1
library("leaflet")
library("sf")
library("raster")
## Loading required package: sp
## 
## Attaching package: 'raster'
## The following object is masked from 'package:dplyr':
## 
##     select
library("rgdal")
## rgdal: version: 1.5-23, (SVN revision 1121)
## Geospatial Data Abstraction Library extensions to R successfully loaded
## Loaded GDAL runtime: GDAL 3.2.1, released 2020/12/29
## Path to GDAL shared files: C:/Users/tycho/OneDrive/Documents/R/win-library/4.1/rgdal/gdal
## GDAL binary built with GEOS: TRUE 
## Loaded PROJ runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721]
## Path to PROJ shared files: C:/Users/tycho/OneDrive/Documents/R/win-library/4.1/rgdal/proj
## PROJ CDN enabled: FALSE
## Linking to sp version:1.4-5
## To mute warnings of possible GDAL/OSR exportToProj4() degradation,
## use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
## Overwritten PROJ_LIB was C:/Users/tycho/OneDrive/Documents/R/win-library/4.1/rgdal/proj
library("shiny")
library("urltools")
library("htmlwidgets")
setwd("C:/Users/tycho/Desktop/DATA110")
nhdata <- read.csv(file = "NHD2016.csv")

View(nhdata)
nhdata <- nhdata[,c("County", "Clinton", "Sanders")]
# Add columns for percents and margins
nhdata$SandersMarginVotes <- nhdata$Sanders - nhdata$Clinton
nhdata$SandersPct <- (nhdata$Sanders - nhdata$Clinton) / (nhdata$Sanders + nhdata$Clinton) # Will use formatting later to multiply by a hundred 
nhdata$ClintonPct <- (nhdata$Clinton - nhdata$Sanders) / (nhdata$Sanders + nhdata$Clinton)
nhdata$SandersMarginPctgPoints <- nhdata$SandersPct - nhdata$ClintonPct
usgeo <- shapefile("C:/Users/tycho/Desktop/DATA110/cb_2014_us_county_5m/cb_2014_us_county_5m.shp")
## Warning in rgdal::readOGR(dirname(x), fn, stringsAsFactors = stringsAsFactors, :
## Z-dimension discarded
nhgeo <- usgeo[usgeo@data$STATEFP=="33",]
qtm(nhgeo)

str(nhgeo$NAME)
##  chr [1:10] "Grafton" "Hillsborough" "Coos" "Belknap" "Rockingham" ...
str(nhdata$County)
##  chr [1:10] "Belknap" "Carroll" "Cheshire" "Coos" "Grafton" "Hillsborough" ...
nhgeo$NAME <- as.character(nhgeo$NAME)
nhgeo <- nhgeo[order(nhgeo$NAME),]
nhdata <- nhdata[order(nhdata$County),]
identical(nhgeo$NAME,nhdata$County )
## [1] TRUE
library(sf)
nhmap <- merge(nhgeo, nhdata, by.x = "NAME", by.y = "County")
str(nhmap)
## Formal class 'SpatialPolygonsDataFrame' [package "sp"] with 5 slots
##   ..@ data       :'data.frame':  10 obs. of  15 variables:
##   .. ..$ NAME                   : chr [1:10] "Belknap" "Carroll" "Cheshire" "Coos" ...
##   .. ..$ STATEFP                : chr [1:10] "33" "33" "33" "33" ...
##   .. ..$ COUNTYFP               : chr [1:10] "001" "003" "005" "007" ...
##   .. ..$ COUNTYNS               : chr [1:10] "00873174" "00873175" "00873176" "00873177" ...
##   .. ..$ AFFGEOID               : chr [1:10] "0500000US33001" "0500000US33003" "0500000US33005" "0500000US33007" ...
##   .. ..$ GEOID                  : chr [1:10] "33001" "33003" "33005" "33007" ...
##   .. ..$ LSAD                   : chr [1:10] "06" "06" "06" "06" ...
##   .. ..$ ALAND                  : chr [1:10] "1036582289" "2411458935" "1830366195" "4648216798" ...
##   .. ..$ AWATER                 : chr [1:10] "177039345" "158933434" "57990901" "90773891" ...
##   .. ..$ Clinton                : int [1:10] 3495 3230 5132 2013 6918 28147 12250 22829 8813 2497
##   .. ..$ Sanders                : int [1:10] 6005 5638 12441 3639 14245 39245 18107 31065 15881 5915
##   .. ..$ SandersMarginVotes     : int [1:10] 2510 2408 7309 1626 7327 11098 5857 8236 7068 3418
##   .. ..$ SandersPct             : num [1:10] 0.264 0.272 0.416 0.288 0.346 ...
##   .. ..$ ClintonPct             : num [1:10] -0.264 -0.272 -0.416 -0.288 -0.346 ...
##   .. ..$ SandersMarginPctgPoints: num [1:10] 0.528 0.543 0.832 0.575 0.692 ...
##   ..@ polygons   :List of 10
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##   .. ..- attr(*, "dimnames")=List of 2
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##   ..@ proj4string:Formal class 'CRS' [package "sp"] with 1 slot
##   .. .. ..@ projargs: chr "+proj=longlat +datum=NAD83 +no_defs"
##   .. .. ..$ comment: chr "GEOGCRS[\"NAD83\",\n    DATUM[\"North American Datum 1983\",\n        ELLIPSOID[\"GRS 1980\",6378137,298.257222"| __truncated__
qtm(nhmap, "SandersMarginVotes")
## Some legend labels were too wide. These labels have been resized to 0.62, 0.62, 0.62, 0.57, 0.53. Increase legend.width (argument of tm_layout) to make the legend wider and therefore the labels larger.

qtm(nhmap, "SandersMarginPctgPoints")

tm_shape(nhmap) +
tm_fill("SandersMarginVotes", title="Sanders Margin, Total Votes", palette = "PRGn") +
tm_borders(alpha=.5) +
tm_text("NAME", size=0.8)
## Warning in sp::proj4string(obj): CRS object has comment, which is lost in output
## Some legend labels were too wide. These labels have been resized to 0.62, 0.62, 0.62, 0.57, 0.53. Increase legend.width (argument of tm_layout) to make the legend wider and therefore the labels larger.

nhstaticmap <- tm_shape(nhmap) +
tm_fill("SandersMarginVotes", title="Sanders Margin, Total Votes", palette = "viridis") + 
tm_borders(alpha=.5) +
tm_text("NAME", size=0.8) + 
tm_style("classic")
nhstaticmap
## Warning in sp::proj4string(obj): CRS object has comment, which is lost in output
## Some legend labels were too wide. These labels have been resized to 0.62, 0.62, 0.62, 0.57, 0.53. Increase legend.width (argument of tm_layout) to make the legend wider and therefore the labels larger.

tmap_save(nhstaticmap, filename="nhdemprimary.jpg") 
## Warning in sp::proj4string(obj): CRS object has comment, which is lost in output

## Warning in sp::proj4string(obj): CRS object has comment, which is lost in output
## Map saved to C:\Users\tycho\Desktop\DATA110\nhdemprimary.jpg
## Resolution: 1501.336 by 2937.385 pixels
## Size: 5.004452 by 9.791282 inches (300 dpi)
clintonPalette <- colorNumeric(palette = "Blues", domain=nhmap$ClintonPct)
#install.packages("scales")
library(scales)
library(raster)
nhpopup <- paste0("County: ", nhmap$County,
"Sanders ", percent(nhmap$SandersPct), " - Clinton ", percent(nhmap$ClintonPct))
nhmap_projected <- sp::spTransform(nhmap, "+proj=longlat +datum=WGS84")
leaflet(nhmap_projected) %>%
  addProviderTiles("CartoDB.Positron") %>%
  addPolygons(stroke=FALSE, 
              smoothFactor = 0.2, 
              fillOpacity = .8, 
              popup=nhpopup, 
              color= ~clintonPalette(nhmap$ClintonPct)
  )
setwd("C:/Users/tycho/Desktop/DATA110")
scdata <- rio::import(scdatafile)
scgeo <- usgeo[usgeo@data$STATEFP=="45",]
qtm(scgeo)

candidates <- colnames(scdata[2:7])
for(i in 2:7){
  j = i + 7
  temp <- scdata[[i]] / scdata$Total
  scdata[[j]] <- temp
  colnames(scdata)[j] <- paste0(colnames(scdata)[i], "Pct")
}  
winner <- colnames(scdata[2:7])
for(i in 1:nrow(scdata)){
  scdata$winner[i] <- names(which.max(scdata[i,2:7]))
}
setwd("C:/Users/tycho/Desktop/DATA110")
sced <- rio::import("SCdegree.xlsx")
str(scgeo$NAME)
##  chr [1:46] "Edgefield" "Lee" "Horry" "Allendale" "Marion" "Dorchester" ...
str(scdata$County)
##  chr [1:46] "Abbeville" "Aiken" "Allendale" "Anderson" "Bamberg" "Barnwell" ...
# Change the county names to plain characters in scgeo:
scgeo$NAME <- as.character(scgeo$NAME)
# Order each data set by county name
scgeo <- scgeo[order(scgeo$NAME),]
scdata <- scdata[order(scdata$County),]
# check name and county columns are identical
if (identical(scgeo$NAME,scdata$County )) {
scmap <- merge(scgeo, scdata, by.x = "NAME", by.y = "County")
} else {stop}

# Change the county names to plain characters in scgeo:
scgeo$NAME <- as.character(scgeo$NAME)

# Order each data set by county name
scgeo <- scgeo[order(scgeo$NAME),]
scdata <- scdata[order(scdata$County),]
str(scgeo$NAME)
##  chr [1:46] "Abbeville" "Aiken" "Allendale" "Anderson" "Bamberg" "Barnwell" ...
str(scdata$County)
##  chr [1:46] "Abbeville" "Aiken" "Allendale" "Anderson" "Bamberg" "Barnwell" ...
scmap <- merge(scgeo, scdata, by.x = "NAME", by.y = "County") 
# Use same intensity for all - get minimum and maximum for the top 3 combined
minpct <- min(c(scdata$`Donald J TrumpPct`, scdata$`Marco RubioPct`, scdata$`Ted CruzPct`))
maxpct <- max(c(scdata$`Donald J TrumpPct`, scdata$`Marco RubioPct`, scdata$`Ted CruzPct`))
trumpPalette <- colorNumeric(palette = "Purples", domain=c(minpct, maxpct))
rubioPalette <- colorNumeric(palette = "Reds", domain = c(minpct, maxpct))
cruzPalette <- colorNumeric(palette = "Oranges", domain = c(minpct, maxpct))

winnerPalette <- colorFactor(palette=c("#984ea3", "#e41a1c"), domain = scmap$winner)
edPalette <- colorNumeric(palette = "Blues", domain=scmap$PctCollegeDegree)
scpopup <- paste0("<b>County: ", scmap$County, "<br />Winner: ", scmap$winner, "</b><br /><br />Trump: ", percent(scmap$`Donald J TrumpPct`), "<br />Rubio: ", percent(scmap$`Marco RubioPct`), "<br />Cruz: ", percent(scmap$`Ted CruzPct`), "<br /><br />Pct w college ed: ", sced$PctCollegeDegree, "% vs state-wide avg of 25%")
scmap <- sp::spTransform(scmap, "+proj=longlat +datum=WGS84")
leaflet(scmap) %>%
  addProviderTiles("CartoDB.Positron") %>%
  addPolygons(stroke=TRUE,
              weight=1,
              smoothFactor = 0.2,
              fillOpacity = .75,
              popup=scpopup, 
              color = ~winnerPalette(scmap$winner),
              group="Winners" ) %>%
    addLegend(position="bottomleft", colors=c("#984ea3", "#e41a1c"), labels=c("Trump", "Rubio"))
scGOPmap <- leaflet(scmap) %>%
  addProviderTiles("CartoDB.Positron") %>%
  addPolygons(stroke=TRUE,
              weight=1,
              smoothFactor = 0.2,
              fillOpacity = .75,
              popup=scpopup, 
              color= ~winnerPalette(scmap$winner),
              group="Winners"  ) %>% 
    addLegend(position="bottomleft", colors=c("#984ea3", "#e41a1c"), labels=c("Trump", "Rubio"))  %>%

  addPolygons(stroke=TRUE,
     weight=1,
     smoothFactor = 0.2, 
     fillOpacity = .75, 
     popup=scpopup, 
     color= ~trumpPalette(scmap$`Donald J TrumpPct`),
     group="Trump") %>%

  addPolygons(stroke=TRUE,
              weight=1,
              smoothFactor = 0.2, 
              fillOpacity = .75, 
              popup=scpopup, 
              color= ~rubioPalette(scmap$`Marco RubioPct`),
              group="Rubio") %>%

  addPolygons(stroke=TRUE,
              weight=1,
              smoothFactor = 0.2, 
              fillOpacity = .75, 
              popup=scpopup, 
              color= ~cruzPalette(scmap$`Ted CruzPct`),
              group="Cruz") %>%

  addPolygons(stroke=TRUE,
              weight=1,
              smoothFactor = 0.2, 
              fillOpacity = .75, 
              popup=scpopup, 
              color= ~edPalette(sced$PctCollegeDegree), #this data is in the sced table, not scmaps
              group="College degs") %>%

  addLayersControl(
      baseGroups=c("Winners", "Trump", "Rubio", "Cruz", "College degs"),
      position = "bottomleft",
      options = layersControlOptions(collapsed = FALSE))

# Now display the map
scGOPmap
htmlwidgets::saveWidget(scGOPmap, file="scGOPwidget.html")

 #save as an HTML file with dependencies in another directory:
htmlwidgets::saveWidget(widget=scGOPmap, file="scGOPprimary_withdependencies.html", selfcontained=FALSE, libdir = "js")