\[\newcommand{\eq}[1]{\begin{align*}#1\end{align*}}\]

Configuration

Data Ingestion

bds.info = f.read.bdsinfo()
bds.info$Fall = ifelse(bds.info$Falls12m > 0, 1, 0)
spectral = f.read.spectral()
dynamics = f.read.dynamics()

Selection Process

Hypothesis Development | Diseases Statistics

The following table is intended to develop feasible hypotheses by providing
. frequency for each disease
. disease frequency associatd with age groups
. number of falls associated with age groups
. subject id

Disease Dis.Freq Group AgeG.Fall Subjects
No 56 Old:8 You:48 Old: 3 You: 12 162, 160, 144, 142, 141, 139, 138, 136, 135, 133, 128, 122, 119, 118, 117, 115, 114, 102, 101, 97, 90, 89, 71, 69, 66, 62, 61, 60, 53, 43, 41, 40, 39, 37, 36, 35, 34, 33, 32, 30, 28, 27, 25, 22, 21, 20, 19, 18, 16, 10, 9, 7, 6, 4, 3, 2
Hypertension 29 Old:28 You:1 Old: 3 You: 0 157, 156, 155, 154, 153, 150, 148, 146, 145, 131, 112, 105, 104, 100, 93, 91, 86, 84, 82, 79, 78, 76, 73, 72, 65, 59, 56, 52, 45
Hypercholesterolemia 20 Old:17 You:3 Old: 4 You: 1 154, 151, 145, 143, 131, 111, 103, 99, 95, 94, 92, 91, 86, 84, 77, 70, 64, 56, 52, 44
Osteopenia 14 Old:12 You:2 Old: 4 You: 0 157, 151, 150, 145, 131, 124, 113, 111, 110, 92, 56, 52, 49, 44
Hypothyroidism 13 Old:10 You:3 Old: 2 You: 1 161, 157, 151, 134, 127, 111, 107, 91, 72, 67, 52, 49, 1
Arthrosis 12 Old:11 You:1 Old: 3 You: 1 132, 108, 96, 87, 86, 85, 82, 77, 74, 70, 58, 55
Diabetes mellitus 12 Old:12 You:0 Old: 2 You: 0 157, 112, 111, 110, 88, 85, 83, 82, 75, 59, 50, 14
Labyrinthitis 12 Old:10 You:2 Old: 3 You: 2 158, 157, 154, 134, 123, 121, 110, 93, 84, 79, 73, 55
Osteoporosis 11 Old:10 You:1 Old: 3 You: 0 134, 109, 106, 105, 100, 88, 82, 81, 79, 77, 52
Rhinitis 11 Old:0 You:11 Old: 0 You: 4 127, 99, 80, 57, 38, 26, 24, 23, 15, 12, 11
Asthma 9 Old:2 You:7 Old: 0 You: 0 163, 159, 154, 148, 140, 63, 31, 8, 5
Sinusitis 5 Old:1 You:4 Old: 0 You: 1 150, 99, 57, 24, 12
Hyperthyroidism 3 Old:1 You:2 Old: 1 You: 1 152, 126, 105
Hypoglycemia 3 Old:2 You:1 Old: 0 You: 0 130, 77, 42
Tendinitis 3 Old:0 You:3 Old: 0 You: 0 159, 152, 13
Allergy 2 Old:1 You:1 Old: 0 You: 0 129, 106
Anxiety 2 Old:1 You:1 Old: 0 You: 0 116, 49
Arrhythmia 2 Old:2 You:0 Old: 0 You: 0 153, 87
Arthritis 2 Old:2 You:0 Old: 0 You: 0 150, 145
Bronchitis 2 Old:1 You:1 Old: 0 You: 1 52, 15
Chodromalacia of the knees 2 Old:0 You:2 Old: 0 You: 0 147, 99
Depression 2 Old:1 You:1 Old: 0 You: 1 70, 55
Endometriosis 2 Old:0 You:2 Old: 0 You: 1 137, 125
Gastritis 2 Old:1 You:1 Old: 1 You: 1 56, 15
Gastroesophageal reflux 2 Old:1 You:1 Old: 0 You: 1 49, 15
Heart problem 2 Old:2 You:0 Old: 0 You: 0 155, 74
Heel spurs 2 Old:2 You:0 Old: 0 You: 0 98, 74
Migraine 2 Old:1 You:1 Old: 0 You: 0 65, 26
Spine problem 2 Old:1 You:1 Old: 0 You: 0 159, 156
Tendinitis of the knees 2 Old:0 You:2 Old: 0 You: 0 159, 152
Anemia 1 Old:1 You:0 Old: 0 You: 0 156
Arthrosis of the feet/hands 1 Old:1 You:0 Old: 1 You: 0 85
Arthrosis of the hands 1 Old:1 You:0 Old: 0 You: 0 74
Arthrosis of the knees 1 Old:1 You:0 Old: 1 You: 0 108
Arthrosis of the left knee 1 Old:0 You:1 Old: 0 You: 1 55
Arthrosis of the spine/knees/toes 1 Old:1 You:0 Old: 1 You: 0 132
Ascending colon cancer 1 Old:1 You:0 Old: 0 You: 0 47
Breathlessness 1 Old:1 You:0 Old: 0 You: 0 67
Bursitis 1 Old:1 You:0 Old: 0 You: 0 145
Conjunctivitis 1 Old:1 You:0 Old: 0 You: 0 106
Deep vein thrombosis 1 Old:1 You:0 Old: 0 You: 0 120
Dermatitis 1 Old:0 You:1 Old: 0 You: 0 5
Esophagitis 1 Old:1 You:0 Old: 1 You: 0 56
Essential tremor 1 Old:1 You:0 Old: 1 You: 0 56
Familial Hypercholesterolemia 1 Old:0 You:1 Old: 0 You: 0 99
Fatty liver 1 Old:1 You:0 Old: 0 You: 0 151
Fibromyalgia 1 Old:0 You:1 Old: 0 You: 0 109
Glaucoma 1 Old:1 You:0 Old: 0 You: 0 86
Hashimoto disease 1 Old:0 You:1 Old: 0 You: 1 80
Heart disease 1 Old:1 You:0 Old: 1 You: 0 51
Hepatitis B 1 Old:0 You:1 Old: 0 You: 0 54
Herniated lumbar disc 1 Old:1 You:0 Old: 0 You: 0 79
Herniated lumbar of the L4-L5 discs 1 Old:0 You:1 Old: 0 You: 0 48
Hypertriglyceridemia 1 Old:1 You:0 Old: 0 You: 0 151
Inflammation of the tibial nerve 1 Old:1 You:0 Old: 0 You: 0 98
Intestine disorder 1 Old:0 You:1 Old: 0 You: 1 29
Keratoconus 1 Old:0 You:1 Old: 0 You: 0 5
Kidney stones 1 Old:0 You:1 Old: 0 You: 0 24
Ligament problems 1 Old:0 You:1 Old: 0 You: 0 159
Lumbar tumor 1 Old:1 You:0 Old: 0 You: 0 100
Lymphedema of the lower members 1 Old:1 You:0 Old: 1 You: 0 51
Melanoma 1 Old:1 You:0 Old: 0 You: 0 46
Parkinson’s disease 1 Old:1 You:0 Old: 0 You: 0 68
Poliomyelitis 1 Old:1 You:0 Old: 0 You: 0 59
Progressive breast cancer 1 Old:1 You:0 Old: 0 You: 0 47
Prostate disease 1 Old:1 You:0 Old: 0 You: 0 93
Prostatitis 1 Old:1 You:0 Old: 0 You: 0 98
Rheumatism 1 Old:1 You:0 Old: 0 You: 0 49
Scoliosis 1 Old:0 You:1 Old: 0 You: 1 143
Sickle cell anemia 1 Old:0 You:1 Old: 0 You: 0 38
Sjogren’s syndrome 1 Old:1 You:0 Old: 1 You: 0 149
Skin cancer 1 Old:1 You:0 Old: 0 You: 0 98
Skin disease 1 Old:1 You:0 Old: 0 You: 0 93
Stroke 1 Old:1 You:0 Old: 0 You: 0 52
Tendinitis of the knees/feet 1 Old:0 You:1 Old: 0 You: 0 159
Urinary tract infection 1 Old:1 You:0 Old: 1 You: 0 113
Varicose veins of the legs 1 Old:1 You:0 Old: 0 You: 0 154
Vascular leakage of the eyes 1 Old:1 You:0 Old: 1 You: 0 85
Vasovagal syncope 1 Old:0 You:1 Old: 0 You: 1 15
Vitiligo 1 Old:0 You:1 Old: 0 You: 1 17

HC = Healthy Controls, IL = Illness

Diseases comparison

  1. Healthy Controls (HC: 8 Old, 48 You)
  2. Hypertension: (IL: 28 Old, 1 You)
  3. Hypercholesterolemia: (IL: 17 Old, 3 You)
  4. Osteopenia (12:2) & Osteoporosis (10:1) & Arthritis (11:1): (IL: 33 Old, 4 You)
  5. Labyrinthitis (10:2) & Rhinitis (0:11) & Sinusitis (1:4) (IL: 11 Old, 17 You)

Diseases associated with falls

  1. Hypertension: high unbalanced age group 28:1, 3 falls of elderly
    Test: low power
  2. Hypercholesterolemia: high unbalanced age group 17:3, 4 falls elderly
    Test: HO Old-IL 4-Falls vsl H1 Old-HC 0-Falls
  3. Osteopenia (4:0) & Osteoporosis (3:0) & Arthritis (3:1) (Falls Old : Falls Young)
    Test: HO Old-IL 1o-Falls vs. H1 8 x Old-HC 5-Falls
  4. Labyrinthitis (3:2) & Rhinitis (0:4) & Sinusitis (0:1) (Falls Old : Falls Young)
    Test: HO You-IL 7-Falls vs. H1 20 x You-HC 0-Falls

——– DEVELOPMENT ———

DATA SET

c(“Hypercholesterolemia”, “Rhinitis”, “Labyrinthitis”, “Arthrosis”,“Sinusitis”)

93 Falls, no illness 7 Falls, 20 Hypercholesterolemia 4 Falls, 3 Hyperthoyroidsism

4 Falls, 13 Osteopenia 4 Falls 11 Osteoporosis

21 Falls, 11 Rhinits, Nose 7 Falls, 12 Labyrinthitis 5 Falls, 5 Sinusities

# readin
df = f.read.bdsinfo()
dis = c("Hypercholesterolemia", "Hyperthoyroidsism",
        "Rhinitis", "Labyrinthitis", "Sinusitis",
        "Arthrosis", "Osteopenia")

# select trial with patient with specific disease
dl = data.frame(sapply(dis, function(x) (grepl(x, df$Illness2))))
df$select = apply(dl, 1, any)


# Allocate disease 
dl$disease = 0
for (i in 1:length(dis)){
      dl$disease[dl[,i]] = rep(colnames(dl)[i], dim(dl)[1])[dl[,i]]
}
df$Disease = dl$disease


vrb = c("Trial", "Subject", "Gender", "AgeGroup", "Falls12m", "Illness2", "Disease", "Ortho-Prosthesis2")
chrt = subset(df[!duplicated(df$Subject), ], select = vrb)
t.kable(chrt)
Trial Subject Gender AgeGroup Falls12m Illness2 Disease Ortho-Prosthesis2
1 BDS00001 1 F Young 0 Hypothyroidism 0 Corrective lens
13 BDS00013 2 F Young 0 No 0 No
25 BDS00025 3 M Young 0 No 0 Bridge teeh
37 BDS00037 4 M Old 1 No 0 Denture
49 BDS00049 5 F Young 0 Asthma, Dermatitis, Keratoconus 0 No
61 BDS00061 6 M Young 1 No 0 Corrective lens, Denture
73 BDS00073 7 M Young 0 No 0 Corrective lens, Dental braces
85 BDS00085 8 F Young 0 Asthma 0 Corrective lens
97 BDS00097 9 F Young 0 No 0 Corrective lens
109 BDS00109 10 F Young 1 No 0 Corrective lens
121 BDS00121 11 M Young 0 Rhinitis Rhinitis No
133 BDS00133 12 M Young 0 Rhinitis, Sinusitis Sinusitis Corrective lens
145 BDS00145 13 M Young 0 Tendinitis 0 Corrective lens
157 BDS00157 14 M Old 0 Diabetes mellitus 0 Corrective lens
169 BDS00169 15 F Young 1 Vasovagal syncope, Gastritis, Bronchitis, Rhinitis, Gastroesophageal reflux Rhinitis No
181 BDS00181 16 M Young 0 No 0 Corrective lens
193 BDS00193 17 F Young 3 Vitiligo 0 No
205 BDS00205 18 M Young 0 No 0 No
217 BDS00217 19 M Young 1 No 0 No
229 BDS00229 20 M Young 1 No 0 Corrective lens, Dental braces
241 BDS00241 21 F Young 0 No 0 Corrective lens
253 BDS00253 22 F Young 0 No 0 Corrective lens
265 BDS00265 23 F Young 0 Rhinitis Rhinitis No
277 BDS00277 24 F Young 0 Rhinitis, Sinusitis, Kidney stones Sinusitis Corrective lens
289 BDS00289 25 F Young 0 No 0 Corrective lens
301 BDS00301 26 F Young 0 Rhinitis, Migraine Rhinitis Corrective lens
313 BDS00313 27 F Young 0 No 0 Dental retention
325 BDS00325 28 M Young 0 No 0 Corrective lens
337 BDS00337 29 F Young 1 Intestine disorder 0 No
349 BDS00349 30 F Young 0 No 0 Corrective lens
361 BDS00361 31 F Young 0 Asthma 0 Corrective lens
373 BDS00373 32 M Young 0 No 0 No
385 BDS00385 33 M Young 0 No 0 Corrective lens
397 BDS00397 34 F Young 0 No 0 Corrective lens
409 BDS00409 35 M Young 0 No 0 No
421 BDS00421 36 M Young 0 No 0 No
433 BDS00433 37 M Young 0 No 0 Corrective lens
445 BDS00445 38 M Young 0 Rhinitis, Sickle cell anemia Rhinitis No
457 BDS00457 39 F Young 0 No 0 No
469 BDS00469 40 F Young 0 No 0 Corrective lens
481 BDS00481 41 M Old 0 No 0 Corrective lens, Bridge teeh
493 BDS00493 42 F Old 0 Hypoglycemia 0 Corrective lens
505 BDS00505 43 F Old 0 No 0 No
517 BDS00517 44 F Old 0 Hypercholesterolemia, Osteopenia Osteopenia Corrective lens
529 BDS00529 45 M Old 0 Hypertension 0 Corrective lens
541 BDS00541 46 M Old 0 Melanoma 0 Corrective lens
553 BDS00553 47 F Old 0 Ascending colon cancer, Progressive breast cancer 0 Corrective lens
565 BDS00565 48 F Young 0 Herniated lumbar of the L4-L5 discs 0 Corrective lens, Dental braces
577 BDS00577 49 F Old 0 Hypothyroidism, Rheumatism, Anxiety, Osteopenia, Gastroesophageal reflux Osteopenia Corrective lens, Hearing aid, Dental implant
589 BDS00589 50 F Old 0 Diabetes mellitus 0 Corrective lens
601 BDS00601 51 F Old 1 Heart disease, Lymphedema of the lower members 0 Corrective lens
613 BDS00613 52 F Old 0 Osteoporosis, Osteopenia, Hypothyroidism, Stroke, Hypertension, Hypercholesterolemia, Bronchitis Osteopenia Corrective lens
625 BDS00625 53 F Young 1 No 0 Corrective lens
637 BDS00637 54 M Young 0 Hepatitis B 0 No
649 BDS00649 55 F Young 3 Depression, Arthrosis of the left knee, Labyrinthitis Arthrosis Corrective lens
661 BDS00661 56 F Old 1 Hypertension, Hypercholesterolemia, Essential tremor, Osteopenia, Gastritis, Esophagitis Osteopenia Corrective lens
673 BDS00673 57 F Young 5 Rhinitis, Sinusitis Sinusitis Corrective lens, Dental retention
685 BDS00685 58 F Old 0 Arthrosis Arthrosis Corrective lens, PaceMaker
697 BDS00697 59 M Old 0 Hypertension, Diabetes mellitus, Poliomyelitis 0 Corrective lens
703 BDS00709 60 M Young 6 No 0 Crutch
712 BDS00721 61 F Young 1 No 0 Corrective lens
724 BDS00733 62 M Young 0 No 0 Corrective lens, Dental braces
736 BDS00745 63 F Young 0 Asthma 0 Corrective lens, Dental retention
748 BDS00757 64 F Old 2 Hypercholesterolemia Hypercholesterolemia Corrective lens, Bridge teeh
760 BDS00769 65 F Old 0 Hypertension, Migraine 0 Corrective lens, Denture
772 BDS00781 66 M Young 0 No 0 Corrective lens
784 BDS00793 67 M Old 0 Hypothyroidism, Breathlessness 0 Corrective lens, Denture
796 BDS00805 68 M Old 0 Parkinson’s disease 0 Corrective lens, Denture
808 BDS00817 69 F Old 0 No 0 Corrective lens
820 BDS00829 70 F Old 0 Depression, Hypercholesterolemia, Arthrosis Arthrosis Corrective lens, Dental prosthesis
832 BDS00841 71 F Old 0 No 0 Bridge teeh
844 BDS00853 72 F Old 1 Hypothyroidism, Hypertension 0 Corrective lens, Denture
856 BDS00865 73 F Old 0 Hypertension, Labyrinthitis Labyrinthitis Corrective lens, Denture
868 BDS00877 74 F Old 0 Heel spurs, Heart problem, Arthrosis of the hands Arthrosis Corrective lens, By pass
880 BDS00889 75 F Old 0 Diabetes mellitus 0 Corrective lens
892 BDS00901 76 M Old 0 Hypertension 0 Corrective lens
904 BDS00913 77 F Old 0 Osteoporosis, Arthrosis, Hypercholesterolemia, Hypoglycemia Arthrosis Corrective lens, Bridge teeh
916 BDS00925 78 F Old 0 Hypertension 0 Corrective lens, Denture
928 BDS00937 79 F Old 0 Hypertension, Osteoporosis, Herniated lumbar disc, Labyrinthitis Labyrinthitis Corrective lens, Denture
940 BDS00949 80 F Young 12 Hashimoto disease, Rhinitis Rhinitis Corrective lens, Extensor left knee orthosis
952 BDS00961 81 F Old 2 Osteoporosis 0 Corrective lens, Denture
964 BDS00973 82 F Old 0 Diabetes mellitus, Hypertension, Osteoporosis, Arthrosis Arthrosis Corrective lens, Dental implant, Denture
976 BDS00985 83 M Old 0 Diabetes mellitus 0 Dental implant
988 BDS00997 84 F Old 0 Labyrinthitis, Hypertension, Hypercholesterolemia Labyrinthitis Corrective lens, Dental prosthesis
1000 BDS01009 85 F Old 1 Diabetes mellitus, Arthrosis of the feet/hands, Vascular leakage of the eyes Arthrosis Corrective lens, Protese dentaria
1012 BDS01021 86 F Old 0 Hypertension, Hypercholesterolemia, Glaucoma, Arthrosis Arthrosis Corrective lens, Hearing aid, Dental prosthesis
1018 BDS01033 87 F Old 0 Arrhythmia, Arthrosis Arthrosis Corrective lens, Hearing aid, Denture
1030 BDS01045 88 F Old 0 Diabetes mellitus, Osteoporosis 0 Corrective lens, Dental implant
1042 BDS01057 89 M Young 0 No 0 No
1054 BDS01069 90 M Young 1 No 0 Corrective lens
1066 BDS01081 91 F Old 0 Hypothyroidism, Hypertension, Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental prosthesis
1078 BDS01093 92 F Old 1 Hypercholesterolemia, Osteopenia Osteopenia Corrective lens, Dental prosthesis
1090 BDS01105 93 M Old 0 Hypertension, Labyrinthitis, Prostate disease, Skin disease Labyrinthitis Corrective lens, Dental prosthesis, Denture
1102 BDS01117 94 F Old 0 Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental implant
1114 BDS01129 95 F Old 1 Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental prosthesis
1126 BDS01141 96 M Old 0 Arthrosis Arthrosis Corrective lens, Dental prosthesis
1138 BDS01153 97 M Young 1 No 0 Corrective lens
1150 BDS01165 98 M Old 0 Heel spurs, Inflammation of the tibial nerve, Prostatitis, Skin cancer 0 Corrective lens, Denture
1162 BDS01177 99 F Young 0 Familial Hypercholesterolemia, Chodromalacia of the knees, Sinusitis, Rhinitis Sinusitis Dental retention
1174 BDS01189 100 F Old 0 Hypertension, Lumbar tumor, Osteoporosis 0 Corrective lens
1186 BDS01201 101 F Young 4 No 0 No
1198 BDS01213 102 F Old 1 No 0 Corrective lens, Denture, Bridge teeh
1210 BDS01225 103 F Old 0 Hypercholesterolemia Hypercholesterolemia Corrective lens, Denture
1222 BDS01237 104 F Old 0 Hypertension 0 Corrective lens
1234 BDS01249 105 F Old 1 Osteoporosis, Hypertension, Hyperthyroidism 0 Corrective lens, Dental prosthesis
1246 BDS01261 106 F Old 0 Allergy, Osteoporosis, Conjunctivitis 0 Corrective lens, Denture
1258 BDS01273 107 F Old 0 Hypothyroidism 0 Corrective lens, Hearing aid
1270 BDS01285 108 F Old 1 Arthrosis of the knees Arthrosis Corrective lens, Denture, Dental implant
1282 BDS01297 109 F Young 0 Osteoporosis, Fibromyalgia 0 Corrective lens
1294 BDS01309 110 F Old 1 Diabetes mellitus, Osteopenia, Labyrinthitis Osteopenia Corrective lens
1306 BDS01321 111 F Old 0 Diabetes mellitus, Hypothyroidism, Hypercholesterolemia, Osteopenia Osteopenia Corrective lens
1318 BDS01333 112 F Old 0 Diabetes mellitus, Hypertension 0 Corrective lens, Dental prosthesis
1330 BDS01345 113 F Old 1 Urinary tract infection, Osteopenia Osteopenia Corrective lens, Dental prosthesis
1342 BDS01357 114 F Young 0 No 0 No
1354 BDS01369 115 F Young 1 No 0 Corrective lens, Dental retention
1366 BDS01381 116 F Young 0 Anxiety 0 No
1378 BDS01393 117 F Young 0 No 0 No
1390 BDS01405 118 F Young 0 No 0 No
1402 BDS01417 119 F Young 0 No 0 Corrective lens
1414 BDS01429 120 F Old 0 Deep vein thrombosis 0 No
1426 BDS01441 121 F Old 1 Labyrinthitis Labyrinthitis Corrective lens
1438 BDS01453 122 M Old 52 No 0 Corrective lens, Denture, Crutch
1442 BDS01465 123 F Young 1 Labyrinthitis Labyrinthitis Corrective lens
1454 BDS01477 124 F Young 0 Osteopenia Osteopenia Corrective lens
1466 BDS01489 125 F Young 0 Endometriosis 0 Corrective lens
1478 BDS01501 126 F Young 3 Hyperthyroidism 0 Corrective lens
1490 BDS01513 127 F Young 3 Hypothyroidism, Rhinitis Rhinitis Corrective lens
1502 BDS01525 128 F Young 0 No 0 Corrective lens
1514 BDS01537 129 F Young 0 Allergy 0 Corrective lens
1526 BDS01549 130 F Young 0 Hypoglycemia 0 Corrective lens, Dental retention
1538 BDS01561 131 F Young 0 Hypertension, Hypercholesterolemia, Osteopenia Osteopenia Corrective lens
1550 BDS01573 132 F Old 1 Arthrosis of the spine/knees/toes Arthrosis Corrective lens, Denture
1562 BDS01585 133 F Old 0 No 0 Corrective lens, Dental prosthesis, Denture
1574 BDS01597 134 F Old 1 Labyrinthitis, Osteoporosis, Hypothyroidism Labyrinthitis Corrective lens, Dental prosthesis
1583 BDS01609 135 M Young 0 No 0 Corrective lens
1595 BDS01621 136 F Young 0 No 0 Corrective lens
1607 BDS01633 137 F Young 3 Endometriosis 0 No
1619 BDS01645 138 M Young 0 No 0 1 intramedullary rod and 3 screws in the left leg
1631 BDS01657 139 F Young 20 No 0 Corrective lens
1643 BDS01669 140 M Young 0 Asthma 0 Corrective lens
1655 BDS01681 141 F Young 0 No 0 No
1667 BDS01693 142 F Young 0 No 0 Corrective lens
1679 BDS01705 143 F Young 2 Scoliosis, Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental retention
1691 BDS01717 144 M Young 0 No 0 No
1703 BDS01729 145 F Old 0 Hypertension, Hypercholesterolemia, Osteopenia, Arthritis, Bursitis Osteopenia Prosthesis aortic valve, Corrective lens, Dental implant
1715 BDS01741 146 M Old 0 Hypertension 0 Corrective lens, Dental prosthesis
1727 BDS01753 147 F Young 0 Chodromalacia of the knees 0 Corrective lens, Dental retention
1739 BDS01765 148 F Old 0 Asthma, Hypertension 0 Corrective lens
1751 BDS01777 149 F Old 1 Sjogren’s syndrome 0 Corrective lens, Denture
1763 BDS01789 150 F Old 0 Hypertension, Osteopenia, Arthritis, Sinusitis Osteopenia Corrective lens, Denture
1775 BDS01801 151 F Old 0 Hypothyroidism, Hypercholesterolemia, Hypertriglyceridemia, Osteopenia, Fatty liver Osteopenia Corrective lens, Dental implant
1787 BDS01813 152 M Young 0 Hyperthyroidism, Tendinitis of the knees 0 Corrective lens
1799 BDS01825 153 F Old 0 Arrhythmia, Hypertension 0 Corrective lens, Dental implant, 1 screw in the right toe
1811 BDS01837 154 M Old 0 Hypertension, Hypercholesterolemia, Labyrinthitis, Asthma, Varicose veins of the legs Labyrinthitis Hearing aid, Corrective lens, Dental implant, Dental prosthesis
1823 BDS01849 155 F Old 0 Hypertension, Heart problem 0 Corrective lens, Denture
1835 BDS01861 156 F Old 0 Anemia, Hypertension, Spine problem 0 Dental implant
1847 BDS01873 157 F Old 0 Hypertension, Diabetes mellitus, Osteopenia, Labyrinthitis, Hypothyroidism Osteopenia Corrective lens, Denture
1859 BDS01885 158 F Old 0 Labyrinthitis Labyrinthitis Corrective lens, Dental prosthesis
1871 BDS01897 159 F Young 0 Tendinitis of the knees/feet, Ligament problems, Spine problem, Asthma 0 No
1883 BDS01909 160 F Young 0 No 0 Corrective lens
1895 BDS01921 161 F Young 0 Hypothyroidism 0 No
1907 BDS01933 162 M Young 0 No 0 Corrective lens
1919 BDS01945 163 M Young 0 Asthma 0 Corrective lens

Splitting into AgeGroup

Old

# AgeGroup
df.old = chrt[chrt$AgeGroup == "Old" ,]
t.kable(do.call(rbind, 
        apply(df.old[,-c(1,2,6)], 2, 
                     as.data.frame(table))
)
)
value.Var1 value.Freq
Gender.1 F 60
Gender.2 M 16
AgeGroup Old 76
Falls12m.1 0 57
Falls12m.2 1 16
Falls12m.3 2 2
Falls12m.4 52 1
Disease.1 0 40
Disease.2 Arthrosis 11
Disease.3 Hypercholesterolemia 5
Disease.4 Labyrinthitis 8
Disease.5 Osteopenia 12
Ortho-Prosthesis2.1 Bridge teeh 1
Ortho-Prosthesis2.2 Corrective lens 20
Ortho-Prosthesis2.3 Corrective lens, Bridge teeh 3
Ortho-Prosthesis2.4 Corrective lens, By pass 1
Ortho-Prosthesis2.5 Corrective lens, Dental implant 3
Ortho-Prosthesis2.6 Corrective lens, Dental implant, 1 screw in the right toe 1
Ortho-Prosthesis2.7 Corrective lens, Dental implant, Denture 1
Ortho-Prosthesis2.8 Corrective lens, Dental prosthesis 12
Ortho-Prosthesis2.9 Corrective lens, Dental prosthesis, Denture 2
Ortho-Prosthesis2.10 Corrective lens, Denture 16
Ortho-Prosthesis2.11 Corrective lens, Denture, Bridge teeh 1
Ortho-Prosthesis2.12 Corrective lens, Denture, Crutch 1
Ortho-Prosthesis2.13 Corrective lens, Denture, Dental implant 1
Ortho-Prosthesis2.14 Corrective lens, Hearing aid 1
Ortho-Prosthesis2.15 Corrective lens, Hearing aid, Dental implant 1
Ortho-Prosthesis2.16 Corrective lens, Hearing aid, Dental prosthesis 1
Ortho-Prosthesis2.17 Corrective lens, Hearing aid, Denture 1
Ortho-Prosthesis2.18 Corrective lens, PaceMaker 1
Ortho-Prosthesis2.19 Corrective lens, Protese dentaria 1
Ortho-Prosthesis2.20 Dental implant 2
Ortho-Prosthesis2.21 Denture 1
Ortho-Prosthesis2.22 Hearing aid, Corrective lens, Dental implant, Dental prosthesis 1
Ortho-Prosthesis2.23 No 2
Ortho-Prosthesis2.24 Prosthesis aortic valve, Corrective lens, Dental implant 1
dis = c("Hypercholesterolemia", "Hyperthoyroidsism",
        "Rhinitis", "Labyrinthitis", "Sinusitis",
        "Arthrosis", "Osteopenia")

l = lapply(dis, function(x) 
      subset(df.old, Disease == x)
      )


t.kable(do.call(rbind, l))
Trial Subject Gender AgeGroup Falls12m Illness2 Disease Ortho-Prosthesis2
748 BDS00757 64 F Old 2 Hypercholesterolemia Hypercholesterolemia Corrective lens, Bridge teeh
1066 BDS01081 91 F Old 0 Hypothyroidism, Hypertension, Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental prosthesis
1102 BDS01117 94 F Old 0 Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental implant
1114 BDS01129 95 F Old 1 Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental prosthesis
1210 BDS01225 103 F Old 0 Hypercholesterolemia Hypercholesterolemia Corrective lens, Denture
856 BDS00865 73 F Old 0 Hypertension, Labyrinthitis Labyrinthitis Corrective lens, Denture
928 BDS00937 79 F Old 0 Hypertension, Osteoporosis, Herniated lumbar disc, Labyrinthitis Labyrinthitis Corrective lens, Denture
988 BDS00997 84 F Old 0 Labyrinthitis, Hypertension, Hypercholesterolemia Labyrinthitis Corrective lens, Dental prosthesis
1090 BDS01105 93 M Old 0 Hypertension, Labyrinthitis, Prostate disease, Skin disease Labyrinthitis Corrective lens, Dental prosthesis, Denture
1426 BDS01441 121 F Old 1 Labyrinthitis Labyrinthitis Corrective lens
1574 BDS01597 134 F Old 1 Labyrinthitis, Osteoporosis, Hypothyroidism Labyrinthitis Corrective lens, Dental prosthesis
1811 BDS01837 154 M Old 0 Hypertension, Hypercholesterolemia, Labyrinthitis, Asthma, Varicose veins of the legs Labyrinthitis Hearing aid, Corrective lens, Dental implant, Dental prosthesis
1859 BDS01885 158 F Old 0 Labyrinthitis Labyrinthitis Corrective lens, Dental prosthesis
685 BDS00685 58 F Old 0 Arthrosis Arthrosis Corrective lens, PaceMaker
820 BDS00829 70 F Old 0 Depression, Hypercholesterolemia, Arthrosis Arthrosis Corrective lens, Dental prosthesis
868 BDS00877 74 F Old 0 Heel spurs, Heart problem, Arthrosis of the hands Arthrosis Corrective lens, By pass
904 BDS00913 77 F Old 0 Osteoporosis, Arthrosis, Hypercholesterolemia, Hypoglycemia Arthrosis Corrective lens, Bridge teeh
964 BDS00973 82 F Old 0 Diabetes mellitus, Hypertension, Osteoporosis, Arthrosis Arthrosis Corrective lens, Dental implant, Denture
1000 BDS01009 85 F Old 1 Diabetes mellitus, Arthrosis of the feet/hands, Vascular leakage of the eyes Arthrosis Corrective lens, Protese dentaria
1012 BDS01021 86 F Old 0 Hypertension, Hypercholesterolemia, Glaucoma, Arthrosis Arthrosis Corrective lens, Hearing aid, Dental prosthesis
1018 BDS01033 87 F Old 0 Arrhythmia, Arthrosis Arthrosis Corrective lens, Hearing aid, Denture
1126 BDS01141 96 M Old 0 Arthrosis Arthrosis Corrective lens, Dental prosthesis
1270 BDS01285 108 F Old 1 Arthrosis of the knees Arthrosis Corrective lens, Denture, Dental implant
1550 BDS01573 132 F Old 1 Arthrosis of the spine/knees/toes Arthrosis Corrective lens, Denture
517 BDS00517 44 F Old 0 Hypercholesterolemia, Osteopenia Osteopenia Corrective lens
577 BDS00577 49 F Old 0 Hypothyroidism, Rheumatism, Anxiety, Osteopenia, Gastroesophageal reflux Osteopenia Corrective lens, Hearing aid, Dental implant
613 BDS00613 52 F Old 0 Osteoporosis, Osteopenia, Hypothyroidism, Stroke, Hypertension, Hypercholesterolemia, Bronchitis Osteopenia Corrective lens
661 BDS00661 56 F Old 1 Hypertension, Hypercholesterolemia, Essential tremor, Osteopenia, Gastritis, Esophagitis Osteopenia Corrective lens
1078 BDS01093 92 F Old 1 Hypercholesterolemia, Osteopenia Osteopenia Corrective lens, Dental prosthesis
1294 BDS01309 110 F Old 1 Diabetes mellitus, Osteopenia, Labyrinthitis Osteopenia Corrective lens
1306 BDS01321 111 F Old 0 Diabetes mellitus, Hypothyroidism, Hypercholesterolemia, Osteopenia Osteopenia Corrective lens
1330 BDS01345 113 F Old 1 Urinary tract infection, Osteopenia Osteopenia Corrective lens, Dental prosthesis
1703 BDS01729 145 F Old 0 Hypertension, Hypercholesterolemia, Osteopenia, Arthritis, Bursitis Osteopenia Prosthesis aortic valve, Corrective lens, Dental implant
1763 BDS01789 150 F Old 0 Hypertension, Osteopenia, Arthritis, Sinusitis Osteopenia Corrective lens, Denture
1775 BDS01801 151 F Old 0 Hypothyroidism, Hypercholesterolemia, Hypertriglyceridemia, Osteopenia, Fatty liver Osteopenia Corrective lens, Dental implant
1847 BDS01873 157 F Old 0 Hypertension, Diabetes mellitus, Osteopenia, Labyrinthitis, Hypothyroidism Osteopenia Corrective lens, Denture

Statistic per disease

t = data.frame()
for (i in dis){
      temp = subset(df.old, Disease == i)
     
      tmp  = do.call(rbind, 
        apply(temp[,-c(1,2,6)], 2, 
                     as.data.frame(table))
      )
     if (dim(tmp)[2] == 2) t = rbind(tmp, t)
}

t.kable(t)
value.Var1 value.Freq
Gender F 12
AgeGroup Old 12
Falls12m.1 0 8
Falls12m.2 1 4
Disease Osteopenia 12
Ortho-Prosthesis2.1 Corrective lens 5
Ortho-Prosthesis2.2 Corrective lens, Dental implant 1
Ortho-Prosthesis2.3 Corrective lens, Dental prosthesis 2
Ortho-Prosthesis2.4 Corrective lens, Denture 2
Ortho-Prosthesis2.5 Corrective lens, Hearing aid, Dental implant 1
Ortho-Prosthesis2.6 Prosthesis aortic valve, Corrective lens, Dental implant 1
Gender.1 F 10
Gender.2 M 1
AgeGroup3 Old 11
Falls12m.13 0 8
Falls12m.23 1 3
Disease3 Arthrosis 11
Ortho-Prosthesis2.13 Corrective lens, Bridge teeh 1
Ortho-Prosthesis2.23 Corrective lens, By pass 1
Ortho-Prosthesis2.33 Corrective lens, Dental implant, Denture 1
Ortho-Prosthesis2.43 Corrective lens, Dental prosthesis 2
Ortho-Prosthesis2.52 Corrective lens, Denture 1
Ortho-Prosthesis2.61 Corrective lens, Denture, Dental implant 1
Ortho-Prosthesis2.7 Corrective lens, Hearing aid, Dental prosthesis 1
Ortho-Prosthesis2.8 Corrective lens, Hearing aid, Denture 1
Ortho-Prosthesis2.9 Corrective lens, PaceMaker 1
Ortho-Prosthesis2.10 Corrective lens, Protese dentaria 1
Gender.11 F 6
Gender.21 M 2
AgeGroup2 Old 8
Falls12m.12 0 6
Falls12m.22 1 2
Disease2 Labyrinthitis 8
Ortho-Prosthesis2.12 Corrective lens 1
Ortho-Prosthesis2.22 Corrective lens, Dental prosthesis 3
Ortho-Prosthesis2.32 Corrective lens, Dental prosthesis, Denture 1
Ortho-Prosthesis2.42 Corrective lens, Denture 2
Ortho-Prosthesis2.51 Hearing aid, Corrective lens, Dental implant, Dental prosthesis 1
Gender1 F 5
AgeGroup1 Old 5
Falls12m.11 0 3
Falls12m.21 1 1
Falls12m.3 2 1
Disease1 Hypercholesterolemia 5
Ortho-Prosthesis2.11 Corrective lens, Bridge teeh 1
Ortho-Prosthesis2.21 Corrective lens, Dental implant 1
Ortho-Prosthesis2.31 Corrective lens, Dental prosthesis 2
Ortho-Prosthesis2.41 Corrective lens, Denture 1

Young

# AgeGroup
df.young = chrt[chrt$AgeGroup == "Young" ,]
t.kable(
      do.call(rbind, 
        apply(df.young[,-c(1,2,6)], 2, 
                     as.data.frame(table))
)
)
value.Var1 value.Freq
Gender.1 F 56
Gender.2 M 31
AgeGroup Young 87
Falls12m.1 0 64
Falls12m.2 1 12
Falls12m.3 2 1
Falls12m.4 3 5
Falls12m.5 4 1
Falls12m.6 5 1
Falls12m.7 6 1
Falls12m.8 12 1
Falls12m.9 20 1
Disease.1 0 71
Disease.2 Arthrosis 1
Disease.3 Hypercholesterolemia 1
Disease.4 Labyrinthitis 1
Disease.5 Osteopenia 2
Disease.6 Rhinitis 7
Disease.7 Sinusitis 4
Ortho-Prosthesis2.1 1 intramedullary rod and 3 screws in the left leg 1
Ortho-Prosthesis2.2 Bridge teeh 1
Ortho-Prosthesis2.3 Corrective lens 44
Ortho-Prosthesis2.4 Corrective lens, Dental braces 4
Ortho-Prosthesis2.5 Corrective lens, Dental retention 6
Ortho-Prosthesis2.6 Corrective lens, Denture 1
Ortho-Prosthesis2.7 Corrective lens, Extensor left knee orthosis 1
Ortho-Prosthesis2.8 Crutch 1
Ortho-Prosthesis2.9 Dental retention 2
Ortho-Prosthesis2.10 No 26
dis = c("Hypercholesterolemia", "Hyperthoyroidsism",
        "Rhinitis", "Labyrinthitis", "Sinusitis",
        "Arthrosis", "Osteopenia")

l = lapply(dis, function(x) 
      subset(df.young, Disease == x)
      )

t.kable(do.call(rbind, l))
Trial Subject Gender AgeGroup Falls12m Illness2 Disease Ortho-Prosthesis2
1679 BDS01705 143 F Young 2 Scoliosis, Hypercholesterolemia Hypercholesterolemia Corrective lens, Dental retention
121 BDS00121 11 M Young 0 Rhinitis Rhinitis No
169 BDS00169 15 F Young 1 Vasovagal syncope, Gastritis, Bronchitis, Rhinitis, Gastroesophageal reflux Rhinitis No
265 BDS00265 23 F Young 0 Rhinitis Rhinitis No
301 BDS00301 26 F Young 0 Rhinitis, Migraine Rhinitis Corrective lens
445 BDS00445 38 M Young 0 Rhinitis, Sickle cell anemia Rhinitis No
940 BDS00949 80 F Young 12 Hashimoto disease, Rhinitis Rhinitis Corrective lens, Extensor left knee orthosis
1490 BDS01513 127 F Young 3 Hypothyroidism, Rhinitis Rhinitis Corrective lens
1442 BDS01465 123 F Young 1 Labyrinthitis Labyrinthitis Corrective lens
133 BDS00133 12 M Young 0 Rhinitis, Sinusitis Sinusitis Corrective lens
277 BDS00277 24 F Young 0 Rhinitis, Sinusitis, Kidney stones Sinusitis Corrective lens
673 BDS00673 57 F Young 5 Rhinitis, Sinusitis Sinusitis Corrective lens, Dental retention
1162 BDS01177 99 F Young 0 Familial Hypercholesterolemia, Chodromalacia of the knees, Sinusitis, Rhinitis Sinusitis Dental retention
649 BDS00649 55 F Young 3 Depression, Arthrosis of the left knee, Labyrinthitis Arthrosis Corrective lens
1454 BDS01477 124 F Young 0 Osteopenia Osteopenia Corrective lens
1538 BDS01561 131 F Young 0 Hypertension, Hypercholesterolemia, Osteopenia Osteopenia Corrective lens

Statistic per disease

t = data.frame()
for (i in dis){
      temp = subset(df.young, Disease == i)
     
      tmp  = do.call(rbind, 
        apply(temp[,-c(1,2,6)], 2, 
                     as.data.frame(table))
      )
     if (dim(tmp)[2] == 2) t = rbind(tmp, t)
}

t.kable(t)
value.Var1 value.Freq
Gender F 2
AgeGroup Young 2
Falls12m 0 2
Disease Osteopenia 2
Ortho-Prosthesis2 Corrective lens 2
Gender3 F 1
AgeGroup5 Young 1
Falls12m3 3 1
Disease5 Arthrosis 1
Ortho-Prosthesis23 Corrective lens 1
Gender.1 F 3
Gender.2 M 1
AgeGroup4 Young 4
Falls12m.1 0 3
Falls12m.2 5 1
Disease4 Sinusitis 4
Ortho-Prosthesis2.1 Corrective lens 2
Ortho-Prosthesis2.2 Corrective lens, Dental retention 1
Ortho-Prosthesis2.3 Dental retention 1
Gender2 F 1
AgeGroup3 Young 1
Falls12m2 1 1
Disease3 Labyrinthitis 1
Ortho-Prosthesis22 Corrective lens 1
Gender.11 F 5
Gender.21 M 2
AgeGroup2 Young 7
Falls12m.11 0 4
Falls12m.21 1 1
Falls12m.3 3 1
Falls12m.4 12 1
Disease2 Rhinitis 7
Ortho-Prosthesis2.11 Corrective lens 2
Ortho-Prosthesis2.21 Corrective lens, Extensor left knee orthosis 1
Ortho-Prosthesis2.31 No 4
Gender1 F 1
AgeGroup1 Young 1
Falls12m1 2 1
Disease1 Hypercholesterolemia 1
Ortho-Prosthesis21 Corrective lens, Dental retention 1

Falls

Table with subjects > 0 falls.

df = f.read.bdsinfo()
df.falls = subset(df, Falls12m > 0 & !duplicated(df$Subject), select =c("Subject", "Falls12m", "Disability2", "Illness2", "Ortho-Prosthesis2", "AgeGroup", "BMI", "Medication" ))
t.kable(df.falls)
Subject Falls12m Disability2 Illness2 Ortho-Prosthesis2 AgeGroup BMI Medication
37 4 1 No No Denture Old 25.413 No
61 6 1 No No Corrective lens, Denture Young 26.429 Beta-blocker
109 10 1 No No Corrective lens Young 18.548 No
169 15 1 No Vasovagal syncope, Gastritis, Bronchitis, Rhinitis, Gastroesophageal reflux No Young 19.742 Oral contraceptive
193 17 3 No Vitiligo No Young 29.496 Essential amino acid
217 19 1 No No No Young 22.043 No
229 20 1 No No Corrective lens, Dental braces Young 17.943 No
337 29 1 No Intestine disorder No Young 21.043 No
601 51 1 No Heart disease, Lymphedema of the lower members Corrective lens Old 29.815 Vasodilator, Calcium-channel blocker, Beta blocker, Nonsteroidal antiinflammatory, HMG coenzyme A reductase inhibitor, Proton pump inhibitor
625 53 1 No No Corrective lens Young 22.740 No
649 55 3 No Depression, Arthrosis of the left knee, Labyrinthitis Corrective lens Young 27.293 Calcium channel blocker
661 56 1 No Hypertension, Hypercholesterolemia, Essential tremor, Osteopenia, Gastritis, Esophagitis Corrective lens Old 28.670 Angiotensin II receptor antagonist, Beta blocker, HMG coenzyme A reductase inhibitor, Sedative, Muscle relaxant
673 57 5 No Rhinitis, Sinusitis Corrective lens, Dental retention Young 21.842 Oral contraceptive
703 60 6 Physical (Cerebral Palsy) No Crutch Young 23.918 No
712 61 1 No No Corrective lens Young 20.094 No
748 64 2 No Hypercholesterolemia Corrective lens, Bridge teeh Old 29.159 HMG coenzyme A reductase inhibitor, Antibiotic
844 72 1 No Hypothyroidism, Hypertension Corrective lens, Denture Old 22.422 Synthetic thyroid hormone, Diuretic, Proton pump inhibitor
940 80 12 Physical (Cerebral Palsy) Hashimoto disease, Rhinitis Corrective lens, Extensor left knee orthosis Young 20.061 No
952 81 2 No Osteoporosis Corrective lens, Denture Old 28.043 Bisphosphonate
1000 85 1 Visual (Left eye and Right eye) Diabetes mellitus, Arthrosis of the feet/hands, Vascular leakage of the eyes Corrective lens, Protese dentaria Old 23.942 Sulfonylurea
1054 90 1 No No Corrective lens Young 23.771 No
1078 92 1 No Hypercholesterolemia, Osteopenia Corrective lens, Dental prosthesis Old 25.400 HMG coenzyme A reductase inhibitor
1114 95 1 No Hypercholesterolemia Corrective lens, Dental prosthesis Old 21.426 HMG coenzyme A reductase inhibitor
1138 97 1 No No Corrective lens Young 17.256 No
1186 101 4 No No No Young 23.202 Oral contraceptive
1198 102 1 No No Corrective lens, Denture, Bridge teeh Old 20.677 No
1234 105 1 No Osteoporosis, Hypertension, Hyperthyroidism Corrective lens, Dental prosthesis Old 24.569 Synthetic thyroid hormone, Beta-blocker, Diuretic, Bisphosphonate
1270 108 1 No Arthrosis of the knees Corrective lens, Denture, Dental implant Old 23.528 Salicylate, Beta blocker, Selective serotonin reuptake inhibitor
1294 110 1 Hearing (Right ear) Diabetes mellitus, Osteopenia, Labyrinthitis Corrective lens Old 22.481 Biguanide
1330 113 1 No Urinary tract infection, Osteopenia Corrective lens, Dental prosthesis Old 25.502 Antibiotic
1354 115 1 No No Corrective lens, Dental retention Young 21.055 Oral contraceptive
1426 121 1 No Labyrinthitis Corrective lens Old 22.512 No
1438 122 52 Visual (Left eye and Right eye), Physical (Tumor in the head surgery) No Corrective lens, Denture, Crutch Old 27.087 No
1442 123 1 Intellectual Labyrinthitis Corrective lens Young 22.065 Phenothiazine (2), Anticonvulsant
1478 126 3 No Hyperthyroidism Corrective lens Young 17.924 Antithyroid
1490 127 3 No Hypothyroidism, Rhinitis Corrective lens Young 18.816 Synthetic thyroid hormone
1550 132 1 No Arthrosis of the spine/knees/toes Corrective lens, Denture Old 22.231 Calcium channel blocker, Selective serotonin reuptake inhibitor, HMG coenzyme A reductase inhibitor
1574 134 1 No Labyrinthitis, Osteoporosis, Hypothyroidism Corrective lens, Dental prosthesis Old 28.278 Bisphosphonate, HMG coenzyme A reductase inhibitor, Synthetic thyroid hormone
1607 137 3 No Endometriosis No Young 20.241 Oral contraceptive
1631 139 20 No No Corrective lens Young 23.178 No
1679 143 2 No Scoliosis, Hypercholesterolemia Corrective lens, Dental retention Young 20.114 HMG coenzyme A reductase inhibitor, Homeopathic
1751 149 1 No Sjogren’s syndrome Corrective lens, Denture Old 23.855 Antimalarial, Benzodiazepine, Nonsteroidal antiinflammatory

Falls / Diseases

diseases = unlist(strsplit(df.falls$Illness2, ','))
diseases = gsub("^ ", "", diseases)
diseases = diseases[!duplicated(diseases)]

falls.disease= sapply(diseases, function(x) {
      sum(grepl(x, df.falls$Illness2))
})
class(falls.disease)
## [1] "integer"
falls.disease = data.frame(Diseases = names(falls.disease), Frequency = falls.disease, row.names = NULL)
falls.disease = falls.disease[order(falls.disease$Frequency, decreasing = TRUE),]
t.kable(falls.disease)
Diseases Frequency
1 No 15
13 Labyrinthitis 5
15 Hypercholesterolemia 5
5 Rhinitis 4
17 Osteopenia 4
14 Hypertension 3
20 Hypothyroidism 3
22 Osteoporosis 3
3 Gastritis 2
23 Diabetes mellitus 2
26 Hyperthyroidism 2
2 Vasovagal syncope 1
4 Bronchitis 1
6 Gastroesophageal reflux 1
7 Vitiligo 1
8 Intestine disorder 1
9 Heart disease 1
10 Lymphedema of the lower members 1
11 Depression 1
12 Arthrosis of the left knee 1
16 Essential tremor 1
18 Esophagitis 1
19 Sinusitis 1
21 Hashimoto disease 1
24 Arthrosis of the feet/hands 1
25 Vascular leakage of the eyes 1
27 Arthrosis of the knees 1
28 Urinary tract infection 1
29 Arthrosis of the spine/knees/toes 1
30 Endometriosis 1
31 Scoliosis 1
32 Sjogren’s syndrome 1

Falls / Medications

meds = unlist(strsplit(df.falls$Medication, ','))
meds = gsub("^ ", "", meds)
meds = meds[!duplicated(meds)]

falls.meds= sapply(meds, function(x) {
      sum(grepl(x, df.falls$Medication))
})
falls.meds = data.frame(meds = names(falls.meds), Frequency = falls.meds, row.names = NULL)
falls.meds = falls.meds[order(falls.meds$Frequency, decreasing = TRUE),]
t.kable(falls.meds)
meds Frequency
1 No 17
9 HMG coenzyme A reductase inhibitor 8
3 Oral contraceptive 5
16 Synthetic thyroid hormone 4
7 Beta blocker 3
18 Bisphosphonate 3
2 Beta-blocker 2
8 Nonsteroidal antiinflammatory 2
10 Proton pump inhibitor 2
11 Calcium channel blocker 2
15 Antibiotic 2
17 Diuretic 2
21 Selective serotonin reuptake inhibitor 2
4 Essential amino acid 1
5 Vasodilator 1
6 Calcium-channel blocker 1
12 Angiotensin II receptor antagonist 1
13 Sedative 1
14 Muscle relaxant 1
19 Sulfonylurea 1
20 Salicylate 1
22 Biguanide 1
24 Anticonvulsant 1
25 Antithyroid 1
26 Homeopathic 1
27 Antimalarial 1
28 Benzodiazepine 1
23 Phenothiazine (2) 0

Falls / Ortho-Prosthesis2

prosth = unlist(strsplit(df.falls$`Ortho-Prosthesis2`, ','))
prosth = gsub("^ ", "", prosth)
prosth = prosth[!duplicated(prosth)]

falls.prosth= sapply(prosth, function(x) {
      sum(grepl(x, df.falls$`Ortho-Prosthesis2`))
})
falls.prosth = data.frame(meds = names(falls.prosth), Frequency = falls.prosth, row.names = NULL)
falls.prosth = falls.prosth[order(falls.prosth$Frequency, decreasing = TRUE),]
t.kable(falls.prosth)
meds Frequency
2 Corrective lens 34
1 Denture 9
3 No 6
10 Dental prosthesis 5
5 Dental retention 3
6 Crutch 2
7 Bridge teeh 2
4 Dental braces 1
8 Extensor left knee orthosis 1
9 Protese dentaria 1
11 Dental implant 1

Rhinits, Falls

df.rh.flls = df[!duplicated(df$Subject), ]
df.rh.flls = df.rh.flls[grepl("Rhinitis", df.rh.flls$Illness2 ), ]
df.rh.flls = subset(df.rh.flls, select = c("Subject", "Falls12m", "Disability2", "Illness2", "Ortho-Prosthesis2", "AgeGroup", "BMI", "Medication" ))
t.kable(df.rh.flls)
Subject Falls12m Disability2 Illness2 Ortho-Prosthesis2 AgeGroup BMI Medication
121 11 0 No Rhinitis No Young 25.196 No
133 12 0 No Rhinitis, Sinusitis Corrective lens Young 20.581 Proton pump inhibitor, Corticosteroid
169 15 1 No Vasovagal syncope, Gastritis, Bronchitis, Rhinitis, Gastroesophageal reflux No Young 19.742 Oral contraceptive
265 23 0 No Rhinitis No Young 28.334 Antihistamine
277 24 0 No Rhinitis, Sinusitis, Kidney stones Corrective lens Young 19.249 Oral contraceptive
301 26 0 No Rhinitis, Migraine Corrective lens Young 18.985 Oral contraceptive
445 38 0 No Rhinitis, Sickle cell anemia No Young 22.259 No
673 57 5 No Rhinitis, Sinusitis Corrective lens, Dental retention Young 21.842 Oral contraceptive
940 80 12 Physical (Cerebral Palsy) Hashimoto disease, Rhinitis Corrective lens, Extensor left knee orthosis Young 20.061 No
1162 99 0 No Familial Hypercholesterolemia, Chodromalacia of the knees, Sinusitis, Rhinitis Dental retention Young 24.168 Oral contraceptive
1490 127 3 No Hypothyroidism, Rhinitis Corrective lens Young 18.816 Synthetic thyroid hormone

Falls | Diseases

Ingestion

# Data Sets
      df.bds = f.read.bdsinfo()
      df.bds$BMI.Class = cut(df.bds$BMI, c(0,25,30,100), labels=c("normal","overweight","obese"))
      df.bds$Fall = ifelse(df.bds$Falls12m >0, 1, 0)
      df.steady = read.csv(paste0(pth, 'steadyness.measures.csv'))
      df = merge(df.bds, df.steady, by = "Trial")
t.kable(head(df, 4))
Trial Subject Vision Surface Age AgeGroup Gender Height Weight BMI FootLen Nationality SkinColor Ystudy Footwear Illness Illness2 Nmedication Medication Ortho-Prosthesis Ortho-Prosthesis2 Disability Disability2 Falls12m FES_1 FES_2 FES_3 FES_4 FES_5 FES_6 FES_7 FES_T FES_S IPAQ_1a IPAQ_1b IPAQ_2a IPAQ_2b IPAQ_3a IPAQ_3b IPAQ_4a IPAQ_4b IPAQ_S TMT_timeA TMT_errorsA TMT_timeB TMT_errorsB Best_1 Best_2 Best_3l Best_3r Best_4 Best_5 Best_6l Best_6r Best_7 Best_8 Best_9 Best_10 Best_11 Best_12 Best_13 Best_14 Best_T Date BMI.Class Fall AP_ ML_ RDIST.AP RDIST.ML MDIST RDIST TOTEX TOTEX.AP TOTEX.ML MVELO MVELO.AP MVELO.ML AREA_CC AREA_CE MFREQ POWER POWER.ML POWER.AP
BDS00001 1 Open Firm 33 Young F 157.5 54.2 21.849 21.8 Brazil Yellow 17 Flip-Flops Yes Hypothyroidism 1 Oral contraceptive Yes Corrective lens No No 0 1 1 1 1 1 1 1 7 Low Concern 7 120 2 90 3 30 0.208 0.167 High 14.06 0 19.69 0 2 2 2 2 2 1 1 1 2 2 2 2 2 2 2 1 25 42285.35 normal 0 -7.994 0.949 0.300 0.173 0.308 0.346 29.924 27.872 7.565 0.611 0.569 0.154 1.011 0.968 0.315 1.237 0.339 3.551
BDS00002 1 Open Firm 33 Young F 157.5 54.2 21.849 21.8 Brazil Yellow 17 Flip-Flops Yes Hypothyroidism 1 Oral contraceptive Yes Corrective lens No No 0 1 1 1 1 1 1 1 7 Low Concern 7 120 2 90 3 30 0.208 0.167 High 14.06 0 19.69 0 2 2 2 2 2 1 1 1 2 2 2 2 2 2 2 1 25 42285.35 normal 0 -7.734 0.550 0.383 0.157 0.335 0.414 32.398 29.909 8.562 0.661 0.610 0.175 1.697 1.131 0.314 2.434 0.731 7.103
BDS00003 1 Open Firm 33 Young F 157.5 54.2 21.849 21.8 Brazil Yellow 17 Flip-Flops Yes Hypothyroidism 1 Oral contraceptive Yes Corrective lens No No 0 1 1 1 1 1 1 1 7 Low Concern 7 120 2 90 3 30 0.208 0.167 High 14.06 0 19.69 0 2 2 2 2 2 1 1 1 2 2 2 2 2 2 2 1 25 42285.35 normal 0 -7.890 0.417 0.208 0.125 0.216 0.242 27.971 26.232 7.064 0.571 0.535 0.144 0.498 0.486 0.421 0.579 0.429 1.517
BDS00004 1 Closed Firm 33 Young F 157.5 54.2 21.849 21.8 Brazil Yellow 17 Flip-Flops Yes Hypothyroidism 1 Oral contraceptive Yes Corrective lens No No 0 1 1 1 1 1 1 1 7 Low Concern 7 120 2 90 3 30 0.208 0.167 High 14.06 0 19.69 0 2 2 2 2 2 1 1 1 2 2 2 2 2 2 2 1 25 42285.35 normal 0 -6.886 0.567 0.181 0.100 0.180 0.207 26.424 24.415 7.207 0.539 0.498 0.147 0.380 0.337 0.476 0.533 0.330 1.601

Variables

vrbls = c("Trial", "Subject", "Vision", "Surface", "AgeGroup", "Age", "Gender", "Illness", "Illness2", "Disability", "Disability2", "Footwear", "BMI", "Falls12m", "Nmedication")
vrbls.stead = names(df.steady)
vrb.dmgrphc = c("Subject", "AgeGroup", "Age", "Gender", "Illness", "Disability","Fall")

Labyrinthis

df.lab = df[grepl("Labyrinthitis", df$Illness2), ]
df.lab.chrt = subset(df.lab, !duplicated(df.lab$Subject))

lt.old = subset(df.lab.chrt, AgeGroup == "Old", 
                     select =c(Subject, Age, Gender, Falls12m, Illness, Illness2))
lt.old = lt.old[lt.old$Subject != "158",  ]
lt.old$Grp = "LT"


hc.old = subset(df, !duplicated(df$Subject) & AgeGroup == "Old" & Illness == "No", 
                select =c(Subject, Age, Gender, Falls12m,Illness,  Illness2))
hc.old$Grp = "HC"

lt.test = data.frame(rbind(hc.old, lt.old))
rownames(lt.test) = NULL

t.kable(lt.test)
Subject Age Gender Falls12m Illness Illness2 Grp
4 61.750 M 1 No No HC
41 68.833 M 0 No No HC
43 60.667 F 0 No No HC
69 65.083 F 0 No No HC
71 61.417 F 0 No No HC
102 66.167 F 1 No No HC
122 64.917 M 52 No No HC
133 82.333 F 0 No No HC
158 72.167 F 0 No Labyrinthitis HC
73 79.750 F 0 Yes Hypertension, Labyrinthitis LT
79 72.250 F 0 Yes Hypertension, Osteoporosis, Herniated lumbar disc, Labyrinthitis LT
84 78.417 F 0 Yes Labyrinthitis, Hypertension, Hypercholesterolemia LT
93 75.583 M 0 Yes Hypertension, Labyrinthitis, Prostate disease, Skin disease LT
110 66.583 F 1 Yes Diabetes mellitus, Osteopenia, Labyrinthitis LT
121 67.000 F 1 Yes Labyrinthitis LT
134 79.917 F 1 Yes Labyrinthitis, Osteoporosis, Hypothyroidism LT
154 71.833 M 0 Yes Hypertension, Hypercholesterolemia, Labyrinthitis, Asthma, Varicose veins of the legs LT
157 61.833 F 0 Yes Hypertension, Diabetes mellitus, Osteopenia, Labyrinthitis, Hypothyroidism LT
lt = df[df$Subject %in% lt.test$Subject ,]
lt$Grp = ifelse(lt$Illness2 == "No", "HC", "LT")