"Protocolo:
+ Daniel Felipe Villa Rengifo
+ Lenguaje: R
+ Tema: Manejo de paquetes en R
+ Fuentes:
1. https://datanalytics.com/libro_r/paquetes.html 2. http://faculty.washington.edu/kenrice/rintro/sess08.pdf"
## [1] "Protocolo:\n \n + Daniel Felipe Villa Rengifo\n \n + Lenguaje: R\n \n + Tema: Manejo de paquetes en R\n\n + Fuentes:\n \n 1. https://datanalytics.com/libro_r/paquetes.html 2. http://faculty.washington.edu/kenrice/rintro/sess08.pdf"
Esto se puede dividir en dos partes, la formal y una forma más sencilla de entenderla.
Empecemos con algunas definiciones. Un paquete es una forma adecuada de organizar tu propio trabajo y, si quieres, compartirlo con otros. Normalmente, un paquete incluirá código (¡no sólo código R!), documentación para el paquete y las funciones que contiene, algunas pruebas para comprobar que todo funciona como debería, y conjuntos de datos.
La información básica sobre un paquete se proporciona en el archivo DESCRIPTION file
, donde puede encontrar lo que hace el paquete, quién es el autor, a qué versión pertenece la documentación, la fecha, el tipo de licencia que utiliza y las dependencias del paquete.
Tenga en cuenta que también puede hacer clic aquí para ver el DESCRIPTION file
.
Además de encontrar los DESCRIPTION files
como cran.r-project.org o stat.ethz.ch, también puede acceder al archivo de descripción dentro de R con el comando packageDescription("paquete")
, a través de la documentación del paquete help(paquete = "paquete")
, o en línea en el repositorio del paquete.
Un paquete R es una extensión de R que contiene conjuntos de datos y funciones específicas para resolver cuestiones concretas.
R viene con paquetes estándar (o base
), que contienen las funciones básicas y los conjuntos de datos, así como las funciones estadísticas y gráfi cas estándar que permiten el funcionamiento de R.
También hay otros miles de paquetes de R disponibles para su descarga e instalación desde CRAN, Bioconductor y GitHub repositories.
NOTA: Después de la instalación, primero debe cargar el paquete para utilizar las funciones del mismo.
Por ejemplo, para el paquete stats
, estas formas serán:
# Solicitamos la descripcion del paquete stats:
message("\n# Solicitamos la descripcion del paquete stats:")
##
## # Solicitamos la descripcion del paquete stats:
packageDescription("stats")
## Package: stats
## Version: 4.0.3
## Priority: base
## Title: The R Stats Package
## Author: R Core Team and contributors worldwide
## Maintainer: R Core Team <R-core@r-project.org>
## Description: R statistical functions.
## License: Part of R 4.0.3
## Imports: utils, grDevices, graphics
## Suggests: MASS, Matrix, SuppDists, methods, stats4
## NeedsCompilation: yes
## Built: R 4.0.3; x86_64-w64-mingw32; 2020-10-10 12:48:06 UTC; windows
##
## -- File: C:/Program Files/R/R-4.0.3/library/stats/Meta/package.rds
# Solicitamos la documentación del paquete:
message("\n# Solicitamos la documentación del paquete:")
##
## # Solicitamos la documentación del paquete:
help(package = "stats")
Un repositorio es un lugar donde se encuentran los paquetes para poder instalarlos desde él. Aunque usted o su organización pueden tener un repositorio local, normalmente están en línea y son accesibles para todo el mundo. Tres de los repositorios más populares para los paquetes de R son:
el repositorio oficial, es una red de servidores ftp y web mantenidos por la comunidad R en todo el mundo. La fundación R lo coordina, y para que un paquete se publique aquí, tiene que pasar varias pruebas que garanticen que el paquete sigue las políticas de CRAN.
se trata de un repositorio de temas específicos, destinado al software de código abierto para la bioinformática. Al igual que CRAN, tiene sus propios procesos de envío y revisión, y su comunidad es muy activa teniendo varias conferencias y reuniones al año.
aunque no es específico de R, Github es probablemente el repositorio más popular para proyectos de código abierto. Su popularidad proviene del espacio ilimitado para el código abierto, la integración con git, un software de control de versiones, y su facilidad para compartir y colaborar con otros. Pero hay que tener en cuenta que no hay ningún proceso de revisión asociado a él.
La forma de instalar un paquete dependerá de dónde se encuentre. Así, para los paquetes disponibles públicamente, esto significa a qué repositorio pertenece. La forma más común es usar el repositorio CRAN, entonces sólo necesitas el nombre del paquete y usar el comando install.packages("paquete")
.
Por ejemplo, el paquete más antiguo publicado en CRAN y que sigue en línea y actualizándose es el paquete vioplot
, de Daniel Adler.
Para instalarlo desde CRAN, es necesario utilizar:
#Instalar uno de los paquetes mas antiguos de R en CRAN:
message("\n# Instalar uno de los paquetes mas antiguos de R en CRAN:")
##
## # Instalar uno de los paquetes mas antiguos de R en CRAN:
cat("\n \ninstall.packages(\"vioplot\")")
##
##
## install.packages("vioplot")
NOTA: Después de ejecutar esto, recibirá algunos mensajes en la pantalla. Dependerán del sistema operativo que esté utilizando, de las dependencias y de si el paquete se ha instalado correctamente.
# Vamos a echar un vistazo más profundo en la salida de la instalación de vioplot, algunos de los mensajes que puede obtener son:
message("\n# Vamos a echar un vistazo más profundo en la salida de la instalación de vioplot, algunos de los mensajes que puede obtener son:")
##
## # Vamos a echar un vistazo más profundo en la salida de la instalación de vioplot, algunos de los mensajes que puede obtener son:
print("Installing package into ‘/home/username/R/x86_64-pc-linux-gnu-library/3.3’
(as ‘lib’ is unspecified)")
## [1] "Installing package into ‘/home/username/R/x86_64-pc-linux-gnu-library/3.3’\n(as ‘lib’ is unspecified)"
Vamos a cargar el paquete al archivo en si utilizando el parámetro library()
.
# Vamos a cargar el paquete al archivo en si:
message("\n# Vamos a cargar el paquete al archivo en si:")
##
## # Vamos a cargar el paquete al archivo en si:
library(vioplot)
## Warning: package 'vioplot' was built under R version 4.0.5
## Loading required package: sm
## Warning: package 'sm' was built under R version 4.0.5
## Package 'sm', version 2.2-5.6: type help(sm) for summary information
## Loading required package: zoo
##
## Attaching package: 'zoo'
## The following objects are masked from 'package:base':
##
## as.Date, as.Date.numeric
cat("\n \nlibrary(vioplot)")
##
##
## library(vioplot)
Por último, para instalar más de un paquete a la vez, basta con escribirlos como un vector de caracteres en el primer argumento de la función install.packages()
:
# Una lista de vectores para instalar mas de un paquete:
message("\n# Una lista de vectores para instalar mas de un paquete:")
##
## # Una lista de vectores para instalar mas de un paquete:
print("No lo ejecuto ya que me instalaria otra vez el paquete")
## [1] "No lo ejecuto ya que me instalaria otra vez el paquete"
cat("\n \ninstall.packages(c(\"vioplot\", \"MASS\"))")
##
##
## install.packages(c("vioplot", "MASS"))
Recuerda que CRAN es una red de servidores (cada uno de ellos llamado “Mirrors”), por lo que puedes especificar cuál quieres utilizar. Si estás usando R a través de la interfaz RGui, puedes hacerlo seleccionándolo de la lista que aparece justo después de usar el comando install.packages()
. En RStudio, el Mirrors ya está seleccionado por defecto.
También puede seleccionar su Mirrors utilizando la función chooseCRANmirror()
, o directamente dentro de la función install.packages()
utilizando el parámetro repo. Puede ver la lista de Mirrors disponibles con getCRANmirrors()
o directamente en este enlace.
para utilizar el Mirrors de la Biblioteca de la Universidad de Ghent (Bélgica) para instalar el paquete vioplot puede ejecutar lo siguiente:
# Instalando un paquete desde un mirror especifico:
message("\n# Instalando un paquete desde un mirror especifico:")
##
## # Instalando un paquete desde un mirror especifico:
install.packages("vioplot", repo = "https://lib.ugent.be/CRAN/")
## Warning: package 'vioplot' is in use and will not be installed
En el caso de Bioconductor, la forma estándar de instalar un paquete es ejecutando primero la siguiente línea de código:
# Script requerido para comenzar a usar paquetes de Bioconductor:
message("\n# Script requerido para comenzar a usar paquetes de Bioconductor:")
##
## # Script requerido para comenzar a usar paquetes de Bioconductor:
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# Sintaxis de como instalar paquetes de Bioconductor:
message("\n# Sintaxis de como instalar paquetes de Bioconductor:")
##
## # Sintaxis de como instalar paquetes de Bioconductor:
cat("\nBiocManager::install(\"Package.Name\")", "\n \nEn caso de ser mas de un paquete utlizar:\n","\nBiocManager::install(c(\"1°Package.Name\", \"2°Package.Name\",..., \"n°Package.Name\")")
##
## BiocManager::install("Package.Name")
##
## En caso de ser mas de un paquete utlizar:
##
## BiocManager::install(c("1°Package.Name", "2°Package.Name",..., "n°Package.Name")
devtools
cada repositorio tiene su propia manera de instalar un paquete desde ellos, así que en el caso de que utilice regularmente paquetes de diferentes fuentes, este comportamiento puede ser un poco frustrante. Una forma más eficiente es probablemente utilizar el paquete devtools para simplificar este proceso, ya que contiene funciones específicas para cada repositorio, incluyendo CRAN.
Puedes instalar devtools como siempre con install.packages("devtools")
, pero puede que también necesites instalar Rtools en Windows, las herramientas de línea de comandos de Xcode en Mac, o r-base-dev y r-devel en Linux.
Después de instalar devtools, podrás utilizar las funciones de utilidad para instalar otros paquetes. Las opciones son
install_bioc()
de Bioconductor,
install_bitbucket()
de Bitbucket,
install_cran()
de CRAN,
install_git()
desde un repositorio git,
install_github()
desde GitHub,
install_local()
desde un archivo local,
install_svn()
desde un repositorio SVN,
install_url()
desde una URL, e install_version()
desde una versión específica de un paquete CRAN.
para instalar el paquete babynames desde su repositorio de Github, puedes utilizar
# Instalamos devtools, donde sera todo un poco más sencillo:
message("\n# Instalamos devtools, donde sera todo un poco más sencillo:")
##
## # Instalamos devtools, donde sera todo un poco más sencillo:
cat("\n \ninstall.packages(\"devtools\")")
##
##
## install.packages("devtools")
## Ahora instalemos desde github el paquete babynames:
message("\n## Ahora instalemos desde github el paquete babynames:")
##
## ## Ahora instalemos desde github el paquete babynames:
devtools::install_github("hadley/babynames")
## WARNING: Rtools is required to build R packages, but is not currently installed.
##
## Please download and install Rtools 4.0 from https://cran.r-project.org/bin/windows/Rtools/.
## Skipping install of 'babynames' from a github remote, the SHA1 (4391c25e) has not changed since last install.
## Use `force = TRUE` to force installation
es normal usar install.packages()
unas cuantas veces, y dada la velocidad a la que se desarrollan los paquetes de R, es posible que más tarde que nunca deba actualizar o reemplazar sus paquetes.
Para comprobar qué paquetes están instalados en tu ordenador, es posible usar:
# Miremos que paquetes tenemos instalados:
message("\n# Miremos que paquetes tenemos instalados:")
##
## # Miremos que paquetes tenemos instalados:
installed.packages()
## Package
## abind "abind"
## aplpack "aplpack"
## arm "arm"
## askpass "askpass"
## assertthat "assertthat"
## babynames "babynames"
## backports "backports"
## base64enc "base64enc"
## BH "BH"
## BiocManager "BiocManager"
## blob "blob"
## brew "brew"
## brio "brio"
## broom "broom"
## bslib "bslib"
## cachem "cachem"
## callr "callr"
## car "car"
## carData "carData"
## cellranger "cellranger"
## checkmate "checkmate"
## cli "cli"
## clipr "clipr"
## coda "coda"
## colorspace "colorspace"
## commandr "commandr"
## commonmark "commonmark"
## conquer "conquer"
## cpp11 "cpp11"
## crayon "crayon"
## credentials "credentials"
## crosstalk "crosstalk"
## curl "curl"
## data.table "data.table"
## DBI "DBI"
## dbplyr "dbplyr"
## desc "desc"
## devtools "devtools"
## diffobj "diffobj"
## digest "digest"
## dplyr "dplyr"
## e1071 "e1071"
## effects "effects"
## ellipsis "ellipsis"
## estimability "estimability"
## evaluate "evaluate"
## fansi "fansi"
## farver "farver"
## fastmap "fastmap"
## forcats "forcats"
## Formula "Formula"
## fs "fs"
## generics "generics"
## gert "gert"
## ggplot2 "ggplot2"
## gh "gh"
## gitcreds "gitcreds"
## glue "glue"
## gridExtra "gridExtra"
## gtable "gtable"
## haven "haven"
## highr "highr"
## Hmisc "Hmisc"
## hms "hms"
## htmlTable "htmlTable"
## htmltools "htmltools"
## htmlwidgets "htmlwidgets"
## httpuv "httpuv"
## httr "httr"
## ini "ini"
## insight "insight"
## isoband "isoband"
## jpeg "jpeg"
## jquerylib "jquerylib"
## jsonlite "jsonlite"
## knitr "knitr"
## labeling "labeling"
## later "later"
## latticeExtra "latticeExtra"
## lazyeval "lazyeval"
## leaps "leaps"
## lifecycle "lifecycle"
## lme4 "lme4"
## lmtest "lmtest"
## lubridate "lubridate"
## magrittr "magrittr"
## manipulate "manipulate"
## manipulateWidget "manipulateWidget"
## maptools "maptools"
## markdown "markdown"
## matrixcalc "matrixcalc"
## MatrixModels "MatrixModels"
## matrixStats "matrixStats"
## memoise "memoise"
## mi "mi"
## mime "mime"
## miniUI "miniUI"
## minqa "minqa"
## mitools "mitools"
## modelr "modelr"
## multcomp "multcomp"
## munsell "munsell"
## mvtnorm "mvtnorm"
## nloptr "nloptr"
## nortest "nortest"
## numDeriv "numDeriv"
## openssl "openssl"
## openxlsx "openxlsx"
## packrat "packrat"
## pbkrtest "pbkrtest"
## pillar "pillar"
## pkgbuild "pkgbuild"
## pkgconfig "pkgconfig"
## pkgload "pkgload"
## png "png"
## praise "praise"
## prettyunits "prettyunits"
## processx "processx"
## progress "progress"
## promises "promises"
## ps "ps"
## purrr "purrr"
## quantreg "quantreg"
## R6 "R6"
## rappdirs "rappdirs"
## rcmdcheck "rcmdcheck"
## Rcmdr "Rcmdr"
## RcmdrMisc "RcmdrMisc"
## RColorBrewer "RColorBrewer"
## Rcpp "Rcpp"
## RcppArmadillo "RcppArmadillo"
## RcppEigen "RcppEigen"
## readr "readr"
## readstata13 "readstata13"
## readxl "readxl"
## relimp "relimp"
## rematch "rematch"
## rematch2 "rematch2"
## remotes "remotes"
## reprex "reprex"
## rgl "rgl"
## rio "rio"
## rlang "rlang"
## rmarkdown "rmarkdown"
## roxygen2 "roxygen2"
## rprojroot "rprojroot"
## rsconnect "rsconnect"
## rstudioapi "rstudioapi"
## rversions "rversions"
## rvest "rvest"
## sandwich "sandwich"
## sass "sass"
## scales "scales"
## selectr "selectr"
## sem "sem"
## sessioninfo "sessioninfo"
## shiny "shiny"
## sm "sm"
## sourcetools "sourcetools"
## sp "sp"
## SparseM "SparseM"
## statmod "statmod"
## stringi "stringi"
## stringr "stringr"
## survey "survey"
## sys "sys"
## tcltk2 "tcltk2"
## testthat "testthat"
## TH.data "TH.data"
## tibble "tibble"
## tidyr "tidyr"
## tidyselect "tidyselect"
## tidyverse "tidyverse"
## tinytex "tinytex"
## usethis "usethis"
## utf8 "utf8"
## vctrs "vctrs"
## vioplot "vioplot"
## viridis "viridis"
## viridisLite "viridisLite"
## waldo "waldo"
## webshot "webshot"
## whisker "whisker"
## withr "withr"
## xfun "xfun"
## xml2 "xml2"
## xopen "xopen"
## xtable "xtable"
## yaml "yaml"
## zip "zip"
## zoo "zoo"
## base "base"
## boot "boot"
## class "class"
## cluster "cluster"
## codetools "codetools"
## compiler "compiler"
## datasets "datasets"
## foreign "foreign"
## graphics "graphics"
## grDevices "grDevices"
## grid "grid"
## KernSmooth "KernSmooth"
## lattice "lattice"
## MASS "MASS"
## Matrix "Matrix"
## methods "methods"
## mgcv "mgcv"
## nlme "nlme"
## nnet "nnet"
## parallel "parallel"
## rpart "rpart"
## spatial "spatial"
## splines "splines"
## stats "stats"
## stats4 "stats4"
## survival "survival"
## tcltk "tcltk"
## tools "tools"
## translations "translations"
## utils "utils"
## LibPath
## abind "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## aplpack "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## arm "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## askpass "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## assertthat "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## babynames "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## backports "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## base64enc "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## BH "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## BiocManager "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## blob "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## brew "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## brio "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## broom "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## bslib "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## cachem "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## callr "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## car "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## carData "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## cellranger "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## checkmate "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## cli "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## clipr "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## coda "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## colorspace "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## commandr "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## commonmark "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## conquer "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## cpp11 "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## crayon "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## credentials "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## crosstalk "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## curl "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## data.table "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## DBI "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## dbplyr "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## desc "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## devtools "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## diffobj "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## digest "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## dplyr "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## e1071 "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## effects "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## ellipsis "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## estimability "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## evaluate "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## fansi "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## farver "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## fastmap "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## forcats "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## Formula "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## fs "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## generics "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
## gert "C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0"
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## readstata13 "0.9.2" NA
## readxl "1.3.1" NA
## relimp "1.0-5" NA
## rematch "1.0.1" NA
## rematch2 "2.1.2" NA
## remotes "2.3.0" NA
## reprex "1.0.0" NA
## rgl "0.105.13" NA
## rio "0.5.16" NA
## rlang "0.4.10" NA
## rmarkdown "2.7" NA
## roxygen2 "7.1.1" NA
## rprojroot "2.0.2" NA
## rsconnect "0.8.17" NA
## rstudioapi "0.13" NA
## rversions "2.0.2" NA
## rvest "0.3.6" NA
## sandwich "3.0-0" NA
## sass "0.3.1" NA
## scales "1.1.1" NA
## selectr "0.4-2" NA
## sem "3.1-11" NA
## sessioninfo "1.1.1" NA
## shiny "1.6.0" NA
## sm "2.2-5.6" NA
## sourcetools "0.1.7" NA
## sp "1.4-5" NA
## SparseM "1.78" NA
## statmod "1.4.35" NA
## stringi "1.5.3" NA
## stringr "1.4.0" NA
## survey "4.0" NA
## sys "3.4" NA
## tcltk2 "1.2-11" NA
## testthat "3.0.2" NA
## TH.data "1.0-10" NA
## tibble "3.0.6" NA
## tidyr "1.1.2" NA
## tidyselect "1.1.0" NA
## tidyverse "1.3.0" NA
## tinytex "0.29" NA
## usethis "2.0.1" NA
## utf8 "1.1.4" NA
## vctrs "0.3.6" NA
## vioplot "0.3.6" NA
## viridis "0.5.1" NA
## viridisLite "0.3.0" NA
## waldo "0.2.4" NA
## webshot "0.5.2" NA
## whisker "0.4" NA
## withr "2.4.1" NA
## xfun "0.21" NA
## xml2 "1.3.2" NA
## xopen "1.0.0" NA
## xtable "1.8-4" NA
## yaml "2.2.1" NA
## zip "2.1.1" NA
## zoo "1.8-8" NA
## base "4.0.3" "base"
## boot "1.3-25" "recommended"
## class "7.3-17" "recommended"
## cluster "2.1.0" "recommended"
## codetools "0.2-16" "recommended"
## compiler "4.0.3" "base"
## datasets "4.0.3" "base"
## foreign "0.8-80" "recommended"
## graphics "4.0.3" "base"
## grDevices "4.0.3" "base"
## grid "4.0.3" "base"
## KernSmooth "2.23-17" "recommended"
## lattice "0.20-41" "recommended"
## MASS "7.3-53" "recommended"
## Matrix "1.2-18" "recommended"
## methods "4.0.3" "base"
## mgcv "1.8-33" "recommended"
## nlme "3.1-149" "recommended"
## nnet "7.3-14" "recommended"
## parallel "4.0.3" "base"
## rpart "4.1-15" "recommended"
## spatial "7.3-12" "recommended"
## splines "4.0.3" "base"
## stats "4.0.3" "base"
## stats4 "4.0.3" "base"
## survival "3.2-7" "recommended"
## tcltk "4.0.3" "base"
## tools "4.0.3" "base"
## translations "4.0.3" NA
## utils "4.0.3" "base"
## Depends
## abind "R (>= 1.5.0)"
## aplpack "R (>= 3.0.0)"
## arm "R (>= 3.1.0), MASS, Matrix (>= 1.0), stats, lme4 (>= 1.0)"
## askpass NA
## assertthat NA
## babynames "R (>= 2.10)"
## backports "R (>= 3.0.0)"
## base64enc "R (>= 2.9.0)"
## BH NA
## BiocManager NA
## blob NA
## brew NA
## brio NA
## broom "R (>= 3.1)"
## bslib "R (>= 2.10)"
## cachem NA
## callr NA
## car "R (>= 3.5.0), carData (>= 3.0-0)"
## carData "R (>= 3.5.0)"
## cellranger "R (>= 3.0.0)"
## checkmate "R (>= 3.0.0)"
## cli "R (>= 2.10)"
## clipr NA
## coda "R (>= 2.14.0)"
## colorspace "R (>= 3.0.0), methods"
## commandr "methods"
## commonmark NA
## conquer "R (>= 3.5.0)"
## cpp11 NA
## crayon NA
## credentials NA
## crosstalk NA
## curl "R (>= 3.0.0)"
## data.table "R (>= 3.1.0)"
## DBI "methods, R (>= 3.0.0)"
## dbplyr "R (>= 3.1)"
## desc "R (>= 3.1.0)"
## devtools "R (>= 3.0.2), usethis (>= 2.0.1)"
## diffobj "R (>= 3.1.0)"
## digest "R (>= 3.3.0)"
## dplyr "R (>= 3.3.0)"
## e1071 NA
## effects "R (>= 3.5.0), carData"
## ellipsis "R (>= 3.2)"
## estimability "stats"
## evaluate "R (>= 3.0.2)"
## fansi "R (>= 3.1.0)"
## farver NA
## fastmap NA
## forcats "R (>= 3.2)"
## Formula "R (>= 2.0.0), stats"
## fs "R (>= 3.1)"
## generics "R (>= 3.1)"
## gert NA
## ggplot2 "R (>= 3.2)"
## gh NA
## gitcreds NA
## glue "R (>= 3.2)"
## gridExtra NA
## gtable "R (>= 3.0)"
## haven "R (>= 3.2)"
## highr "R (>= 3.2.3)"
## Hmisc "lattice, survival (>= 3.1-6), Formula, ggplot2 (>= 2.2)"
## hms NA
## htmlTable NA
## htmltools "R (>= 2.14.1)"
## htmlwidgets NA
## httpuv "R (>= 2.15.1)"
## httr "R (>= 3.2)"
## ini NA
## insight "R (>= 3.4)"
## isoband NA
## jpeg "R (>= 2.9.0)"
## jquerylib NA
## jsonlite "methods"
## knitr "R (>= 3.2.3)"
## labeling NA
## later NA
## latticeExtra "R (>= 3.6.0), lattice"
## lazyeval "R (>= 3.1.0)"
## leaps ""
## lifecycle "R (>= 3.3)"
## lme4 "R (>= 3.2.0), Matrix (>= 1.2-1), methods, stats"
## lmtest "R (>= 3.0.0), stats, zoo"
## lubridate "methods, R (>= 3.2)"
## magrittr NA
## manipulate "R (>= 2.11.1)"
## manipulateWidget NA
## maptools "R (>= 2.10), sp (>= 1.0-11)"
## markdown "R (>= 2.11.1)"
## matrixcalc "R (>= 2.0.1)"
## MatrixModels "R (>= 3.0.1)"
## matrixStats "R (>= 2.12.0)"
## memoise NA
## mi "R (>= 3.0.0), methods, Matrix, stats4"
## mime NA
## miniUI NA
## minqa NA
## mitools NA
## modelr "R (>= 3.2)"
## multcomp "stats, graphics, mvtnorm (>= 1.0-10), survival (>= 2.39-4),\nTH.data (>= 1.0-2)"
## munsell NA
## mvtnorm "R(>= 3.5.0)"
## nloptr NA
## nortest NA
## numDeriv "R (>= 2.11.1)"
## openssl NA
## openxlsx "R (>= 3.3.0)"
## packrat "R (>= 3.0.0)"
## pbkrtest "R (>= 3.5.0), lme4 (>= 1.1.10)"
## pillar NA
## pkgbuild "R (>= 3.1)"
## pkgconfig NA
## pkgload NA
## png "R (>= 2.9.0)"
## praise NA
## prettyunits NA
## processx NA
## progress NA
## promises NA
## ps "R (>= 3.1)"
## purrr "R (>= 3.2)"
## quantreg "R (>= 2.6), stats, SparseM"
## R6 "R (>= 3.0)"
## rappdirs "R (>= 3.2)"
## rcmdcheck NA
## Rcmdr "R (>= 3.5.0), grDevices, graphics, methods, stats, utils,\nsplines, RcmdrMisc (>= 2.7-1), car (>= 3.0-8), effects (>=\n4.0-3)"
## RcmdrMisc "R (>= 3.5.0), utils, car (>= 3.0-0), sandwich"
## RColorBrewer "R (>= 2.0.0)"
## Rcpp NA
## RcppArmadillo "R (>= 3.3.0)"
## RcppEigen NA
## readr "R (>= 3.1)"
## readstata13 NA
## readxl NA
## relimp "R (>= 2.0.0)"
## rematch NA
## rematch2 NA
## remotes "R (>= 3.0.0)"
## reprex "R (>= 3.3)"
## rgl "R (>= 3.3.0)"
## rio "R (>= 2.15.0)"
## rlang "R (>= 3.3.0)"
## rmarkdown "R (>= 3.0)"
## roxygen2 "R (>= 3.2)"
## rprojroot "R (>= 3.0.0)"
## rsconnect "R (>= 3.0.0)"
## rstudioapi NA
## rversions NA
## rvest "R (>= 3.2), xml2"
## sandwich "R (>= 3.0.0)"
## sass NA
## scales "R (>= 3.2)"
## selectr "R (>= 3.0)"
## sem "R (>= 3.5.0), stats"
## sessioninfo NA
## shiny "R (>= 3.0.2), methods"
## sm "R (>= 3.1.0)"
## sourcetools "R (>= 3.0.2)"
## sp "R (>= 3.0.0), methods"
## SparseM "R (>= 2.15), methods"
## statmod "R (>= 3.0.0)"
## stringi "R (>= 2.14)"
## stringr "R (>= 3.1)"
## survey "R (>= 3.1.0), grid, methods, Matrix, survival"
## sys NA
## tcltk2 "R (>= 2.8.0), tcltk"
## testthat "R (>= 3.1)"
## TH.data "R (>= 2.10.0), survival, MASS"
## tibble "R (>= 3.1.0)"
## tidyr "R (>= 3.1)"
## tidyselect "R (>= 3.2)"
## tidyverse "R (>= 3.2)"
## tinytex NA
## usethis "R (>= 3.2)"
## utf8 "R (>= 2.10)"
## vctrs "R (>= 3.3)"
## vioplot "sm, zoo"
## viridis "R (>= 2.10), viridisLite (>= 0.3.0)"
## viridisLite "R (>= 2.10)"
## waldo NA
## webshot "R (>= 3.0)"
## whisker NA
## withr "R (>= 3.2.0)"
## xfun NA
## xml2 "R (>= 3.1.0)"
## xopen "R (>= 3.1)"
## xtable "R (>= 2.10.0)"
## yaml NA
## zip NA
## zoo "R (>= 3.1.0), stats"
## base NA
## boot "R (>= 3.0.0), graphics, stats"
## class "R (>= 3.0.0), stats, utils"
## cluster "R (>= 3.3.0)"
## codetools "R (>= 2.1)"
## compiler NA
## datasets NA
## foreign "R (>= 4.0.0)"
## graphics NA
## grDevices NA
## grid NA
## KernSmooth "R (>= 2.5.0), stats"
## lattice "R (>= 3.0.0)"
## MASS "R (>= 3.1.0), grDevices, graphics, stats, utils"
## Matrix "R (>= 3.2.0)"
## methods NA
## mgcv "R (>= 2.14.0), nlme (>= 3.1-64)"
## nlme "R (>= 3.4.0)"
## nnet "R (>= 3.0.0), stats, utils"
## parallel NA
## rpart "R (>= 2.15.0), graphics, stats, grDevices"
## spatial "R (>= 3.0.0), graphics, stats, utils"
## splines NA
## stats NA
## stats4 NA
## survival "R (>= 3.4.0)"
## tcltk NA
## tools NA
## translations NA
## utils NA
## Imports
## abind "methods, utils"
## aplpack NA
## arm "abind, coda, graphics, grDevices, Hmisc, methods, nlme, utils"
## askpass "sys (>= 2.1)"
## assertthat "tools"
## babynames "tibble"
## backports NA
## base64enc NA
## BH NA
## BiocManager "utils"
## blob "methods, rlang, vctrs (>= 0.2.1)"
## brew NA
## brio NA
## broom "backports, dplyr (>= 1.0.0), ellipsis, generics (>= 0.0.2),\nglue, methods, purrr, rlang, stringr, tibble (>= 3.0.0), tidyr\n(>= 1.0.0)"
## bslib "grDevices, htmltools (>= 0.5.1), jsonlite, sass (>= 0.3.0),\ndigest (>= 0.6.25), jquerylib (>= 0.1.3), rlang, magrittr"
## cachem "rlang, fastmap"
## callr "processx (>= 3.5.0), R6, utils"
## car "abind, MASS, mgcv, nnet, pbkrtest (>= 0.4-4), quantreg,\ngrDevices, utils, stats, graphics, maptools, rio, lme4, nlme"
## carData NA
## cellranger "rematch, tibble"
## checkmate "backports (>= 1.1.0), utils"
## cli "glue, utils"
## clipr "utils"
## coda "lattice"
## colorspace "graphics, grDevices, stats"
## commandr "utils"
## commonmark NA
## conquer "Rcpp (>= 1.0.3), Matrix, matrixStats, stats"
## cpp11 NA
## crayon "grDevices, methods, utils"
## credentials "openssl (>= 1.3), sys (>= 2.1), curl, jsonlite, askpass"
## crosstalk "htmltools (>= 0.3.6), jsonlite, lazyeval, R6"
## curl NA
## data.table "methods"
## DBI NA
## dbplyr "assertthat (>= 0.2.0), blob (>= 1.2.0), DBI (>= 1.0.0), dplyr\n(>= 1.0.3), ellipsis, glue (>= 1.2.0), lifecycle, magrittr,\nmethods, purrr (>= 0.2.5), R6 (>= 2.2.2), rlang (>= 0.2.0),\ntibble (>= 1.4.2), tidyselect (>= 0.2.4), utils, vctrs, withr"
## desc "utils, R6, crayon, rprojroot"
## devtools "callr (>= 3.6.0), cli (>= 2.4.0), desc (>= 1.3.0), ellipsis\n(>= 0.3.1), fs (>= 1.5.0), httr (>= 1.4.2), lifecycle (>=\n1.0.0), memoise (>= 2.0.0), pkgbuild (>= 1.2.0), pkgload (>=\n1.2.1), rcmdcheck (>= 1.3.3), remotes (>= 2.3.0), rlang (>=\n0.4.10), roxygen2 (>= 7.1.1), rstudioapi (>= 0.13), rversions\n(>= 2.0.2), sessioninfo (>= 1.1.1), stats, testthat (>= 3.0.2),\ntools, utils, withr (>= 2.4.1)"
## diffobj "crayon (>= 1.3.2), tools, methods, utils, stats"
## digest "utils"
## dplyr "ellipsis, generics, glue (>= 1.3.2), lifecycle (>= 0.2.0),\nmagrittr (>= 1.5), methods, R6, rlang (>= 0.4.9), tibble (>=\n2.1.3), tidyselect (>= 1.1.0), utils, vctrs (>= 0.3.5)"
## e1071 "graphics, grDevices, class, stats, methods, utils"
## effects "lme4, nnet, lattice, grid, colorspace, graphics, grDevices,\nstats, survey, utils, estimability, insight"
## ellipsis "rlang (>= 0.3.0)"
## estimability NA
## evaluate "methods"
## fansi NA
## farver NA
## fastmap NA
## forcats "ellipsis, magrittr, rlang, tibble"
## Formula NA
## fs "methods"
## generics "methods"
## gert "askpass, credentials (>= 1.2.1), openssl (>= 1.4.1),\nrstudioapi (>= 0.11), sys, zip (>= 2.1.0)"
## ggplot2 "digest, glue, grDevices, grid, gtable (>= 0.1.1), isoband,\nMASS, mgcv, rlang (>= 0.3.0), scales (>= 0.5.0), stats, tibble,\nwithr (>= 2.0.0)"
## gh "cli (>= 2.0.1), gitcreds, httr (>= 1.2), ini, jsonlite"
## gitcreds NA
## glue "methods"
## gridExtra "gtable, grid, grDevices, graphics, utils"
## gtable "grid"
## haven "forcats (>= 0.2.0), hms, methods, Rcpp (>= 0.11.4), readr (>=\n0.1.0), rlang (>= 0.4.0), tibble, tidyselect, vctrs (>= 0.3.0)"
## highr NA
## Hmisc "methods, latticeExtra, cluster, rpart, nnet, foreign, gtable,\ngrid, gridExtra, data.table, htmlTable (>= 1.11.0), viridis,\nhtmltools, base64enc"
## hms "ellipsis, lifecycle, methods, pkgconfig, rlang, vctrs (>=\n0.2.1)"
## htmlTable "stringr, knitr (>= 1.6), magrittr (>= 1.5), methods,\ncheckmate, htmlwidgets, htmltools, rstudioapi (>= 0.6)"
## htmltools "utils, digest, grDevices, base64enc, rlang"
## htmlwidgets "grDevices, htmltools (>= 0.3), jsonlite (>= 0.9.16), yaml"
## httpuv "Rcpp (>= 0.11.0), utils, R6, promises, later (>= 0.8.0)"
## httr "curl (>= 3.0.0), jsonlite, mime, openssl (>= 0.8), R6"
## ini NA
## insight "methods, stats, utils"
## isoband "grid, utils"
## jpeg NA
## jquerylib "htmltools"
## jsonlite NA
## knitr "evaluate (>= 0.10), highr, methods, markdown, stringr (>=\n0.6), yaml (>= 2.1.19), xfun (>= 0.19), tools"
## labeling "stats, graphics"
## later "Rcpp (>= 0.12.9), rlang"
## latticeExtra "grid, stats, utils, grDevices, png, jpeg, RColorBrewer"
## lazyeval NA
## leaps NA
## lifecycle "glue, rlang (>= 0.4.10)"
## lme4 "graphics, grid, splines, utils, parallel, MASS, lattice, boot,\nnlme (>= 3.1-123), minqa (>= 1.1.15), nloptr (>= 1.0.4),\nstatmod"
## lmtest "graphics"
## lubridate "generics, Rcpp (>= 0.12.13)"
## magrittr NA
## manipulate NA
## manipulateWidget "shiny (>= 1.0.3), miniUI, htmltools, htmlwidgets, knitr,\nmethods, tools, base64enc, grDevices, codetools, webshot"
## maptools "foreign (>= 0.8), methods, grid, lattice, stats, utils,\ngrDevices"
## markdown "utils, xfun, mime (>= 0.3)"
## matrixcalc NA
## MatrixModels "stats, methods, Matrix (>= 1.1-5)"
## matrixStats NA
## memoise "rlang (>= 0.4.10), cachem"
## mi "arm (>= 1.4-11)"
## mime "tools"
## miniUI "shiny (>= 0.13), htmltools (>= 0.3), utils"
## minqa "Rcpp (>= 0.9.10)"
## mitools "DBI, methods, stats"
## modelr "broom, magrittr, purrr (>= 0.2.2), rlang (>= 0.2.0), tibble,\ntidyr (>= 0.8.0), tidyselect, vctrs"
## multcomp "sandwich (>= 2.3-0), codetools"
## munsell "colorspace, methods"
## mvtnorm "stats, methods"
## nloptr NA
## nortest "stats"
## numDeriv NA
## openssl "askpass"
## openxlsx "grDevices, methods, Rcpp, stats, utils, zip, stringi"
## packrat "tools, utils"
## pbkrtest "broom, dplyr, magrittr, MASS, Matrix (>= 1.2.3), methods,\nnumDeriv, parallel, knitr"
## pillar "cli, crayon (>= 1.3.4), ellipsis, fansi, lifecycle, rlang (>=\n0.3.0), utf8 (>= 1.1.0), utils, vctrs (>= 0.2.0)"
## pkgbuild "callr (>= 3.2.0), cli, crayon, desc, prettyunits, R6,\nrprojroot, withr (>= 2.1.2)"
## pkgconfig "utils"
## pkgload "cli, crayon, desc, methods, rlang, rprojroot, rstudioapi,\nutils, withr"
## png NA
## praise NA
## prettyunits NA
## processx "ps (>= 1.2.0), R6, utils"
## progress "hms, prettyunits, R6, crayon"
## promises "R6, Rcpp, later, rlang, stats, magrittr"
## ps "utils"
## purrr "magrittr (>= 1.5), rlang (>= 0.3.1)"
## quantreg "methods, graphics, Matrix, MatrixModels, conquer"
## R6 NA
## rappdirs NA
## rcmdcheck "callr (>= 3.1.1.9000), cli (>= 1.1.0), crayon, desc (>=\n1.2.0), digest, pkgbuild, prettyunits, R6, rprojroot,\nsessioninfo (>= 1.1.1), utils, withr, xopen"
## Rcmdr "tcltk, tcltk2 (>= 1.2-6), abind, relimp (>= 1.0-5), lme4"
## RcmdrMisc "abind, colorspace, Hmisc (>= 4.1-0), MASS, e1071, foreign,\nhaven, readstata13, readxl, graphics, grDevices, stats,\nnortest, lattice"
## RColorBrewer NA
## Rcpp "methods, utils"
## RcppArmadillo "Rcpp (>= 0.11.0), stats, utils, methods"
## RcppEigen "Matrix (>= 1.1-0), Rcpp (>= 0.11.0), stats, utils"
## readr "cli, clipr, crayon, hms (>= 0.4.1), methods, rlang, R6,\ntibble, utils, lifecycle"
## readstata13 "Rcpp (>= 0.11.5)"
## readxl "cellranger, Rcpp (>= 0.12.18), tibble (>= 1.3.1), utils"
## relimp "stats, utils"
## rematch NA
## rematch2 "tibble"
## remotes "methods, stats, tools, utils"
## reprex "callr (>= 3.3.1), cli, clipr (>= 0.4.0), fs, glue, knitr (>=\n1.23), rlang (>= 0.4.0), rmarkdown, utils, withr (>= 2.3.0)"
## rgl "graphics, grDevices, stats, utils, htmlwidgets, htmltools,\nknitr, jsonlite (>= 0.9.20), shiny, magrittr, crosstalk,\nmanipulateWidget (>= 0.9.0)"
## rio "tools, stats, utils, foreign, haven (>= 1.1.0), curl (>= 0.6),\ndata.table (>= 1.9.8), readxl (>= 0.1.1), openxlsx, tibble"
## rlang "utils"
## rmarkdown "tools, utils, knitr (>= 1.22), yaml (>= 2.1.19), htmltools (>=\n0.3.5), evaluate (>= 0.13), jsonlite, tinytex (>= 0.11), xfun\n(>= 0.15), methods, stringr (>= 1.2.0)"
## roxygen2 "brew, commonmark, desc (>= 1.2.0), digest, knitr, methods,\npkgload (>= 1.0.2), purrr (>= 0.3.3), R6 (>= 2.1.2), Rcpp (>=\n0.11.0), rlang, stringi, stringr (>= 1.0.0), utils, xml2"
## rprojroot NA
## rsconnect "curl, digest, jsonlite, openssl, packrat (>= 0.5), rstudioapi\n(>= 0.5), yaml (>= 2.1.5)"
## rstudioapi NA
## rversions "curl, utils, xml2 (>= 1.0.0)"
## rvest "httr (>= 0.5), magrittr, selectr"
## sandwich "stats, utils, zoo"
## sass "digest, fs, rlang, htmltools, R6, rappdirs"
## scales "farver (>= 2.0.3), labeling, lifecycle, munsell (>= 0.5), R6,\nRColorBrewer, viridisLite"
## selectr "methods, stringr, R6"
## sem "matrixcalc, MASS, boot, mi (>= 0.9-99), utils"
## sessioninfo "cli, tools, utils, withr"
## shiny "utils, grDevices, httpuv (>= 1.5.2), mime (>= 0.3), jsonlite\n(>= 0.9.16), xtable, digest (>= 0.6.25), htmltools (>=\n0.5.0.9001), R6 (>= 2.0), sourcetools, later (>= 1.0.0),\npromises (>= 1.1.0), tools, crayon, rlang (>= 0.4.9), fastmap\n(>= 1.0.0), withr, commonmark (>= 1.7), glue (>= 1.3.2), bslib\n(>= 0.2.2.9002), cachem, ellipsis, lifecycle (>= 0.2.0)"
## sm NA
## sourcetools NA
## sp "utils, stats, graphics, grDevices, lattice, grid"
## SparseM "graphics, stats, utils"
## statmod "stats, graphics"
## stringi "tools, utils, stats"
## stringr "glue (>= 1.2.0), magrittr, stringi (>= 1.1.7)"
## survey "stats, graphics, splines, lattice, minqa, numDeriv, mitools\n(>= 2.4)"
## sys NA
## tcltk2 NA
## testthat "brio, callr (>= 3.5.1), cli (>= 2.2.0), crayon (>= 1.3.4),\ndesc, digest, ellipsis (>= 0.2.0), evaluate, jsonlite,\nlifecycle, magrittr, methods, pkgload, praise, processx, ps (>=\n1.3.4), R6 (>= 2.2.0), rlang (>= 0.4.9), utils, waldo (>=\n0.2.4), withr (>= 2.3.0)"
## TH.data NA
## tibble "cli, crayon (>= 1.3.4), ellipsis (>= 0.2.0), fansi (>= 0.4.0),\nlifecycle (>= 0.2.0), magrittr, methods, pillar (>= 1.4.3),\npkgconfig, rlang (>= 0.4.3), utils, vctrs (>= 0.3.2)"
## tidyr "dplyr (>= 0.8.2), ellipsis (>= 0.1.0), glue, magrittr, purrr,\nrlang, tibble (>= 2.1.1), tidyselect (>= 1.1.0), utils, vctrs\n(>= 0.3.0), lifecycle"
## tidyselect "ellipsis, glue (>= 1.3.0), purrr (>= 0.3.2), rlang (>= 0.4.6),\nvctrs (>= 0.2.2)"
## tidyverse "broom (>= 0.5.2), cli (>= 1.1.0), crayon (>= 1.3.4), dbplyr\n(>= 1.4.2), dplyr (>= 0.8.3), forcats (>= 0.4.0), ggplot2 (>=\n3.2.1), haven (>= 2.2.0), hms (>= 0.5.2), httr (>= 1.4.1),\njsonlite (>= 1.6), lubridate (>= 1.7.4), magrittr (>= 1.5),\nmodelr (>= 0.1.5), pillar (>= 1.4.2), purrr (>= 0.3.3), readr\n(>= 1.3.1), readxl (>= 1.3.1), reprex (>= 0.3.0), rlang (>=\n0.4.1), rstudioapi (>= 0.10), rvest (>= 0.3.5), stringr (>=\n1.4.0), tibble (>= 2.1.3), tidyr (>= 1.0.0), xml2 (>= 1.2.2)"
## tinytex "xfun (>= 0.19)"
## usethis "cli, clipr (>= 0.3.0), crayon, curl (>= 2.7), desc, fs (>=\n1.3.0), gert (>= 1.0.2), gh (>= 1.2.0), glue (>= 1.3.0),\njsonlite, lifecycle, purrr, rappdirs, rlang (>= 0.4.10),\nrprojroot (>= 1.2), rstudioapi, stats, utils, whisker, withr\n(>= 2.3.0), yaml"
## utf8 NA
## vctrs "ellipsis (>= 0.2.0), digest, glue, rlang (>= 0.4.7)"
## vioplot NA
## viridis "stats, ggplot2 (>= 1.0.1), gridExtra"
## viridisLite NA
## waldo "cli, diffobj, fansi, glue, methods, rematch2, rlang (>=\n0.4.10), tibble"
## webshot "magrittr, jsonlite, callr"
## whisker NA
## withr "graphics, grDevices, stats"
## xfun "stats, tools"
## xml2 "methods"
## xopen "processx"
## xtable "stats, utils"
## yaml NA
## zip NA
## zoo "utils, graphics, grDevices, lattice (>= 0.20-27)"
## base NA
## boot NA
## class "MASS"
## cluster "graphics, grDevices, stats, utils"
## codetools NA
## compiler NA
## datasets NA
## foreign "methods, utils, stats"
## graphics "grDevices"
## grDevices NA
## grid "grDevices, utils"
## KernSmooth NA
## lattice "grid, grDevices, graphics, stats, utils"
## MASS "methods"
## Matrix "methods, graphics, grid, stats, utils, lattice"
## methods "utils, stats"
## mgcv "methods, stats, graphics, Matrix, splines, utils"
## nlme "graphics, stats, utils, lattice"
## nnet NA
## parallel "tools, compiler"
## rpart NA
## spatial NA
## splines "graphics, stats"
## stats "utils, grDevices, graphics"
## stats4 "graphics, methods, stats"
## survival "graphics, Matrix, methods, splines, stats, utils"
## tcltk "utils"
## tools NA
## translations NA
## utils NA
## LinkingTo
## abind NA
## aplpack NA
## arm NA
## askpass NA
## assertthat NA
## babynames NA
## backports NA
## base64enc NA
## BH NA
## BiocManager NA
## blob NA
## brew NA
## brio NA
## broom NA
## bslib NA
## cachem NA
## callr NA
## car NA
## carData NA
## cellranger NA
## checkmate NA
## cli NA
## clipr NA
## coda NA
## colorspace NA
## commandr NA
## commonmark NA
## conquer "Rcpp, RcppArmadillo (>= 0.9.850.1.0)"
## cpp11 NA
## crayon NA
## credentials NA
## crosstalk NA
## curl NA
## data.table NA
## DBI NA
## dbplyr NA
## desc NA
## devtools NA
## diffobj NA
## digest NA
## dplyr NA
## e1071 NA
## effects NA
## ellipsis NA
## estimability NA
## evaluate NA
## fansi NA
## farver NA
## fastmap NA
## forcats NA
## Formula NA
## fs NA
## generics NA
## gert NA
## ggplot2 NA
## gh NA
## gitcreds NA
## glue NA
## gridExtra NA
## gtable NA
## haven "Rcpp"
## highr NA
## Hmisc NA
## hms NA
## htmlTable NA
## htmltools NA
## htmlwidgets NA
## httpuv "Rcpp, BH, later"
## httr NA
## ini NA
## insight NA
## isoband "testthat"
## jpeg NA
## jquerylib NA
## jsonlite NA
## knitr NA
## labeling NA
## later "Rcpp, BH"
## latticeExtra NA
## lazyeval NA
## leaps NA
## lifecycle NA
## lme4 "Rcpp (>= 0.10.5), RcppEigen"
## lmtest NA
## lubridate "Rcpp"
## magrittr NA
## manipulate NA
## manipulateWidget NA
## maptools NA
## markdown NA
## matrixcalc NA
## MatrixModels NA
## matrixStats NA
## memoise NA
## mi NA
## mime NA
## miniUI NA
## minqa "Rcpp"
## mitools NA
## modelr NA
## multcomp NA
## munsell NA
## mvtnorm NA
## nloptr NA
## nortest NA
## numDeriv NA
## openssl NA
## openxlsx "Rcpp"
## packrat NA
## pbkrtest NA
## pillar NA
## pkgbuild NA
## pkgconfig NA
## pkgload NA
## png NA
## praise NA
## prettyunits NA
## processx NA
## progress NA
## promises "later, Rcpp"
## ps NA
## purrr NA
## quantreg NA
## R6 NA
## rappdirs NA
## rcmdcheck NA
## Rcmdr NA
## RcmdrMisc NA
## RColorBrewer NA
## Rcpp NA
## RcppArmadillo "Rcpp"
## RcppEigen "Rcpp"
## readr "BH, cpp11"
## readstata13 "Rcpp"
## readxl "progress, Rcpp"
## relimp NA
## rematch NA
## rematch2 NA
## remotes NA
## reprex NA
## rgl NA
## rio NA
## rlang NA
## rmarkdown NA
## roxygen2 "Rcpp"
## rprojroot NA
## rsconnect NA
## rstudioapi NA
## rversions NA
## rvest NA
## sandwich NA
## sass NA
## scales NA
## selectr NA
## sem NA
## sessioninfo NA
## shiny NA
## sm NA
## sourcetools NA
## sp NA
## SparseM NA
## statmod NA
## stringi NA
## stringr NA
## survey NA
## sys NA
## tcltk2 NA
## testthat NA
## TH.data NA
## tibble NA
## tidyr "cpp11 (>= 0.2.1)"
## tidyselect NA
## tidyverse NA
## tinytex NA
## usethis NA
## utf8 NA
## vctrs NA
## vioplot NA
## viridis NA
## viridisLite NA
## waldo NA
## webshot NA
## whisker NA
## withr NA
## xfun NA
## xml2 NA
## xopen NA
## xtable NA
## yaml NA
## zip NA
## zoo NA
## base NA
## boot NA
## class NA
## cluster NA
## codetools NA
## compiler NA
## datasets NA
## foreign NA
## graphics NA
## grDevices NA
## grid NA
## KernSmooth NA
## lattice NA
## MASS NA
## Matrix NA
## methods NA
## mgcv NA
## nlme NA
## nnet NA
## parallel NA
## rpart NA
## spatial NA
## splines NA
## stats NA
## stats4 NA
## survival NA
## tcltk NA
## tools NA
## translations NA
## utils NA
## Suggests
## abind NA
## aplpack "tkrplot, jpeg, png, splines, utils, tcltk"
## arm NA
## askpass "testthat"
## assertthat "testthat, covr"
## babynames "testthat (>= 3.0.0)"
## backports NA
## base64enc NA
## BH NA
## BiocManager "BiocVersion, remotes, rmarkdown, testthat, withr, curl, knitr"
## blob "covr, crayon, pillar (>= 1.2.1), testthat"
## brew NA
## brio "testthat (>= 2.1.0), covr"
## broom "AER, akima, AUC, bbmle, betareg, biglm, binGroup, boot,\nbtergm, car, caret, cluster, cmprsk, coda, covr, drc, e1071,\nemmeans, epiR, ergm (>= 3.10.4), fixest (>= 0.5.0), gam (>=\n1.15), gamlss, gamlss.data, gamlss.dist, gee, geepack, ggplot2,\nglmnet, glmnetUtils, gmm, Hmisc, irlba, joineRML, Kendall,\nknitr, ks, Lahman, lavaan, leaps, lfe, lm.beta, lme4, lmodel2,\nlmtest (>= 0.9.38), lsmeans, maps, maptools, margins, MASS,\nMatrix, mclust, mediation, metafor, mfx, mgcv, mlogit,\nmodeldata, modeltests, muhaz, multcomp, network, nnet, orcutt\n(>= 2.2), ordinal, plm, poLCA, psych, quantreg, Rchoice, rgeos,\nrmarkdown, robust, robustbase, rsample, sandwich, sp, spdep,\nspatialreg, speedglm, spelling, survey, survival, systemfit,\ntestthat (>= 2.1.0), tseries, vars, zoo"
## bslib "shiny, rmarkdown, knitr, testthat, withr, rappdirs, curl"
## cachem "testthat"
## callr "cli, covr, ps, rprojroot, spelling, testthat, withr (>=\n2.3.0)"
## car "alr4, boot, coxme, knitr, leaps, lmtest, Matrix,\nMatrixModels, rgl (>= 0.93.960), sandwich, SparseM, survival,\nsurvey"
## carData NA
## cellranger "covr, testthat (>= 1.0.0), knitr, rmarkdown"
## checkmate "R6, fastmatch, data.table (>= 1.9.8), devtools, ggplot2,\nknitr, magrittr, microbenchmark, rmarkdown, testthat (>=\n0.11.0), tinytest (>= 1.1.0), tibble"
## cli "callr, covr, grDevices, htmlwidgets, knitr, methods, mockery,\nps (>= 1.3.4.9000), rmarkdown, rstudioapi, prettycode (>=\n1.1.0), testthat, tibble, withr"
## clipr "covr, knitr, rmarkdown, rstudioapi (>= 0.5), testthat (>=\n2.0.0)"
## coda NA
## colorspace "datasets, utils, KernSmooth, MASS, kernlab, mvtnorm, vcd,\ntcltk, shiny, shinyjs, ggplot2, dplyr, scales, grid, png, jpeg,\nknitr, rmarkdown, RColorBrewer, rcartocolor, scico, viridis,\nwesanderson"
## commandr NA
## commonmark "curl, testthat, xml2"
## conquer NA
## cpp11 "bench, brio, callr, cli, covr, decor, desc, ggplot2, glue,\nknitr, lobstr, mockery, progress, rmarkdown, scales, testthat,\ntibble, utils, vctrs, withr"
## crayon "mockery, rstudioapi, testthat, withr"
## credentials "testthat, knitr, rmarkdown"
## crosstalk "shiny, ggplot2, testthat (>= 2.1.0)"
## curl "spelling, testthat (>= 1.0.0), knitr, jsonlite, rmarkdown,\nmagrittr, httpuv (>= 1.4.4), webutils"
## data.table "bit64 (>= 4.0.0), bit (>= 4.0.4), curl, R.utils, xts,\nnanotime, zoo (>= 1.8-1), yaml, knitr, rmarkdown"
## DBI "blob, covr, dbplyr, dplyr, glue, hms, knitr, magrittr,\nrmarkdown, rprojroot, RMariaDB, RSQLite (>= 1.1-2), testthat,\nxml2"
## dbplyr "bit64, covr, knitr, Lahman, nycflights13, odbc, RMariaDB (>=\n1.0.2), rmarkdown, RPostgres (>= 1.1.3), RPostgreSQL, RSQLite\n(>= 2.1.0), testthat (>= 3.0.0), tidyr"
## desc "covr, testthat, whoami, withr, spelling, gh"
## devtools "BiocManager (>= 1.30.12), covr (>= 3.5.1), curl (>= 4.3),\ndigest (>= 0.6.27), DT (>= 0.17), foghorn (>= 1.3.2), gh (>=\n1.2.1), gmailr (>= 1.0.0), knitr (>= 1.31), lintr (>= 2.0.1),\nMASS, mockery (>= 0.4.2), pingr (>= 2.0.1), pkgdown (>= 1.6.1),\nrhub (>= 1.1.1), rmarkdown (>= 2.7), spelling (>= 2.2)"
## diffobj "knitr, rmarkdown"
## digest "tinytest, knitr, rmarkdown, minidown"
## dplyr "bench, broom, callr, covr, DBI, dbplyr (>= 1.4.3), knitr,\nLahman, lobstr, microbenchmark, nycflights13, purrr, rmarkdown,\nRMySQL, RPostgreSQL, RSQLite, testthat (>= 2.1.0), withr"
## e1071 "cluster, mlbench, nnet, randomForest, rpart, SparseM, xtable,\nMatrix, MASS, slam"
## effects "pbkrtest (>= 0.4-4), nlme, MASS, poLCA, heplots, splines,\nordinal, car, knitr, betareg, alr4, robustlmm"
## ellipsis "covr, testthat"
## estimability NA
## evaluate "testthat, lattice, ggplot2"
## fansi "unitizer, knitr, rmarkdown"
## farver "testthat (>= 2.1.0), covr"
## fastmap "testthat (>= 2.1.1)"
## forcats "covr, dplyr, ggplot2, knitr, readr, rmarkdown, testthat"
## Formula NA
## fs "testthat, covr, pillar (>= 1.0.0), tibble (>= 1.1.0), crayon,\nrmarkdown, knitr, withr, spelling, vctrs (>= 0.3.0)"
## generics "covr, pkgload, testthat, tibble"
## gert "spelling, knitr, rmarkdown, testthat"
## ggplot2 "covr, dplyr, ggplot2movies, hexbin, Hmisc, knitr, lattice,\nmapproj, maps, maptools, multcomp, munsell, nlme, profvis,\nquantreg, RColorBrewer, rgeos, rmarkdown, rpart, sf (>= 0.7-3),\nsvglite (>= 1.2.0.9001), testthat (>= 2.1.0), vdiffr (>= 0.3.0)"
## gh "covr, knitr, mockery, rmarkdown, rprojroot, spelling,\ntestthat (>= 2.3.2), withr"
## gitcreds "codetools, testthat, knitr, mockery, oskeyring, rmarkdown,\nwithr"
## glue "testthat, covr, magrittr, crayon, knitr, rmarkdown, DBI,\nRSQLite, R.utils, forcats, microbenchmark, rprintf, stringr,\nggplot2, dplyr, withr, vctrs (>= 0.3.0)"
## gridExtra "ggplot2, egg, lattice, knitr, testthat"
## gtable "covr, testthat, knitr, rmarkdown, ggplot2, profvis"
## haven "covr, fs, knitr, rmarkdown, testthat, pillar (>= 1.4.0), cli,\ncrayon"
## highr "knitr, testit"
## Hmisc "acepack, chron, rms, mice, tables, knitr, plotly (>= 4.5.6),\nrlang, plyr"
## hms "crayon, lubridate, pillar (>= 1.1.0), testthat (>= 3.0.0)"
## htmlTable "testthat, XML, xml2, Hmisc, reshape, rmarkdown, chron,\nlubridate, tibble, purrr, tidyselect, glue, rlang, tidyr (>=\n0.7.2), dplyr (>= 0.7.4)"
## htmltools "markdown, testthat, withr, Cairo, ragg, shiny"
## htmlwidgets "knitr (>= 1.8), rmarkdown, testthat"
## httpuv "testthat, callr, curl, websocket"
## httr "covr, httpuv, jpeg, knitr, png, readr, rmarkdown, testthat\n(>= 0.8.0), xml2"
## ini "testthat"
## insight "AER, afex, aod, BayesFactor, bayestestR, bbmle, bdsmatrix,\nbetareg, BGGM, biglm, blavaan, blme, brms, censReg, cgam,\nclubSandwich, coxme, cplm, crch, dplyr, effectsize, emmeans,\nestimatr, feisr, fixest, gam, gamlss, gamm4, gbm, gee, geepack,\nGLMMadaptive, glmmTMB, gmnl, gt, httr, ivreg, JM, knitr,\nlavaan, lfe, lme4, lmtest, logistf, MASS, Matrix, mclust,\nMCMCglmm, merTools, metaBMA, mgcv, mice, mlogit, multgee, nlme,\nnnet, nonnest2, ordinal, panelr, parameters, parsnip,\nperformance, plm, pscl, quantreg, rmarkdown, rms, robustbase,\nrobustlmm, rstanarm (>= 2.21.1), rstudioapi, sandwich,\nspeedglm, spelling, splines, statmod, survey, survival,\ntestthat, tripack, truncreg, VGAM"
## isoband "covr, ggplot2, knitr, magick, microbenchmark, rmarkdown, sf,\ntestthat, xml2"
## jpeg NA
## jquerylib "testthat"
## jsonlite "httr, curl, plyr, testthat, knitr, rmarkdown, R.rsp, sf"
## knitr "formatR, testit, digest, rgl (>= 0.95.1201), codetools,\nrmarkdown, htmlwidgets (>= 0.7), webshot, tikzDevice (>= 0.10),\ntinytex, reticulate (>= 1.4), JuliaCall (>= 0.11.1), magick,\npng, jpeg, gifski, xml2 (>= 1.2.0), httr, DBI (>= 0.4-1),\nshowtext, tibble, sass, ragg, styler (>= 1.2.0)"
## labeling NA
## later "knitr, rmarkdown, testthat"
## latticeExtra "maps, mapproj, deldir, tripack, quantreg, zoo, MASS, mgcv"
## lazyeval "knitr, rmarkdown (>= 0.2.65), testthat, covr"
## leaps "biglm"
## lifecycle "covr, crayon, knitr, rmarkdown, testthat (>= 3.0.1), tibble"
## lme4 "knitr, rmarkdown, PKPDmodels, MEMSS, testthat (>= 0.8.1),\nggplot2, mlmRev, optimx (>= 2013.8.6), gamm4, pbkrtest, HSAUR3,\nnumDeriv, car, dfoptim, mgcv"
## lmtest "car, strucchange, sandwich, dynlm, stats4, survival, AER"
## lubridate "covr, knitr, testthat (>= 2.1.0), vctrs (>= 0.3.0), rmarkdown"
## magrittr "covr, knitr, rlang, rmarkdown, testthat"
## manipulate NA
## manipulateWidget "dygraphs, leaflet, plotly, xts, rmarkdown, testthat, covr"
## maptools "rgeos (>= 0.1-8), spatstat (>= 1.60), PBSmapping, maps,\nRColorBrewer, raster, polyclip, spatstat.utils, plotrix"
## markdown "knitr, RCurl"
## matrixcalc NA
## MatrixModels NA
## matrixStats "base64enc, ggplot2, knitr, microbenchmark, R.devices, R.rsp"
## memoise "digest, aws.s3, covr, googleAuthR, googleCloudStorageR, httr,\ntestthat"
## mi "betareg, lattice, knitr, MASS, nnet, parallel, sn, survival,\ntruncnorm, foreign"
## mime NA
## miniUI NA
## minqa NA
## mitools "RODBC, foreign"
## modelr "compiler, covr, ggplot2, testthat"
## multcomp "lme4 (>= 0.999375-16), nlme, robustbase, coin, MASS, foreign,\nxtable, lmtest, coxme (>= 2.2-1), SimComp, ISwR, tram (>=\n0.2-5)"
## munsell "ggplot2, testthat"
## mvtnorm NA
## nloptr "testthat (>= 0.8.1), knitr, rmarkdown, inline (>= 0.3.14)"
## nortest NA
## numDeriv NA
## openssl "testthat (>= 2.1.0), digest, knitr, rmarkdown, jsonlite,\njose, sodium"
## openxlsx "knitr, testthat, roxygen2, rmarkdown"
## packrat "testthat (>= 0.7), devtools, httr, knitr, rmarkdown"
## pbkrtest NA
## pillar "bit64, debugme, DiagrammeR, knitr, lubridate, nycflights13,\nrmarkdown, survival, testthat (>= 3.0.2), tibble, withr"
## pkgbuild "Rcpp, cpp11, testthat, covr"
## pkgconfig "covr, testthat, disposables (>= 1.0.3)"
## pkgload "bitops, covr, pkgbuild, Rcpp, testthat"
## png NA
## praise "testthat"
## prettyunits "codetools, covr, testthat"
## processx "callr (>= 3.2.0), cli, codetools, covr, curl, debugme,\nparallel, testthat, withr"
## progress "Rcpp, testthat, withr"
## promises "testthat, future (>= 1.21.0), fastmap (>= 1.1.0), purrr,\nknitr, rmarkdown, vembedr, spelling"
## ps "callr, covr, curl, pingr, processx (>= 3.1.0), R6, rlang,\ntestthat, tibble"
## purrr "covr, crayon, dplyr (>= 0.7.8), knitr, rmarkdown, testthat,\ntibble, tidyselect"
## quantreg "tripack, akima, MASS, survival, rgl, logspline, nor1mix,\nFormula, zoo, R.rsp"
## R6 "knitr, microbenchmark, pryr, testthat, ggplot2, scales"
## rappdirs "roxygen2, testthat (>= 3.0.0), covr, withr"
## rcmdcheck "covr, knitr, mockery, rmarkdown, testthat"
## Rcmdr "aplpack, boot, colorspace, e1071, foreign, grid, Hmisc,\nknitr, lattice, leaps, lmtest, markdown, MASS, mgcv, multcomp\n(>= 0.991-2), nlme, nnet, nortest, readxl, rgl (>= 0.96.0),\nrmarkdown (>= 0.9.5), sem (>= 2.1-1)"
## RcmdrMisc "boot, datasets, carData"
## RColorBrewer NA
## Rcpp "tinytest, inline, rbenchmark, pkgKitten (>= 0.1.2)"
## RcppArmadillo "tinytest, Matrix (>= 1.3.0), pkgKitten, reticulate, slam"
## RcppEigen "inline, tinytest, pkgKitten, microbenchmark"
## readr "covr, curl, dplyr, knitr, rmarkdown, spelling, stringi,\ntestthat, xml2"
## readstata13 "testthat"
## readxl "covr, knitr, rmarkdown, rprojroot (>= 1.1), testthat"
## relimp "tcltk, nnet, MASS, Rcmdr"
## rematch "covr, testthat"
## rematch2 "covr, testthat"
## remotes "brew, callr, codetools, curl, covr, git2r (>= 0.23.0), knitr,\nmockery, pkgbuild (>= 1.0.1), pingr, rmarkdown, rprojroot,\ntestthat, webfakes, withr"
## reprex "covr, fortunes, miniUI, rprojroot, rstudioapi, sessioninfo,\nshiny, spelling, styler (>= 1.2.0), testthat (>= 3.0.0)"
## rgl "MASS, rmarkdown, deldir, orientlib, lattice, misc3d,\nrstudioapi, magick, plotrix (>= 3.7-3), tripack, interp,\nalphashape3d, tcltk, js (>= 1.2), akima, webshot2"
## rio "datasets, bit64, testthat, knitr, magrittr, clipr, csvy,\nfeather, fst, hexView, jsonlite, readODS (>= 1.6.4), readr,\nrmatio, xml2 (>= 1.2.0), yaml"
## rlang "cli, covr, crayon, glue, magrittr, methods, pak, pillar,\nrmarkdown, testthat (>= 3.0.0), vctrs (>= 0.2.3), withr"
## rmarkdown "shiny (>= 1.6.0), tufte, testthat (>= 3.0.0), digest,\ndygraphs, vctrs, tibble, fs, rsconnect, withr (>= 2.3.0), bslib\n(>= 0.2.4), sass"
## roxygen2 "covr, devtools, rmarkdown, testthat (>= 2.1.0), R.methodsS3,\nR.oo"
## rprojroot "covr, knitr, lifecycle, mockr, rmarkdown, testthat (>=\n3.0.0), withr"
## rsconnect "RCurl, callr, httpuv, knitr, plumber (>= 0.3.2), reticulate,\nrmarkdown (>= 1.1), shiny, sourcetools, testthat, xtable"
## rstudioapi "testthat, knitr, rmarkdown, clipr"
## rversions "mockery, testthat"
## rvest "covr, knitr, png, rmarkdown, spelling, stringi (>= 0.3.1),\ntestthat"
## sandwich "AER, car, geepack, lattice, lmtest, MASS, multiwayvcov,\nparallel, pcse, plm, pscl, scatterplot3d, stats4, strucchange,\nsurvival"
## sass "testthat, knitr, rmarkdown, withr, shiny"
## scales "bit64, covr, dichromat, ggplot2, hms (>= 0.5.0), testthat (>=\n2.1.0)"
## selectr "testthat, XML, xml2"
## sem "polycor, DiagrammeR"
## sessioninfo "callr, covr, mockery, testthat"
## shiny "datasets, Cairo (>= 1.5-5), testthat (>= 2.1.1), knitr (>=\n1.6), markdown, rmarkdown, ggplot2, reactlog (>= 1.0.0),\nmagrittr, shinytest (>= 1.4.0.9003), yaml, future, dygraphs,\nragg, showtext, sass"
## sm "rgl, misc3d, akima, gam, tkrplot, rpanel (>= 1.1-4), tcltk"
## sourcetools "testthat"
## sp "RColorBrewer, rgdal (>= 1.2-3), rgeos (>= 0.3-13), gstat,\nmaptools, deldir"
## SparseM NA
## statmod "MASS, tweedie"
## stringi NA
## stringr "covr, htmltools, htmlwidgets, knitr, rmarkdown, testthat"
## survey "foreign, MASS, KernSmooth, hexbin, RSQLite, quantreg,\nparallel, CompQuadForm, DBI, AER"
## sys "unix (>= 1.4), spelling, testthat"
## tcltk2 "utils"
## testthat "covr, curl (>= 0.9.5), diffviewer (>= 0.1.0), knitr, mockery,\nrmarkdown, rstudioapi, shiny, usethis, vctrs (>= 0.1.0), xml2"
## TH.data "dplyr, gdata, plyr"
## tibble "bench, bit64, blob, covr, DiagrammeR, dplyr, evaluate,\nformattable, ggplot2, hms, htmltools, import, knitr, lubridate,\nmockr, nycflights13, purrr, rmarkdown, testthat (>= 3.0.1),\ntidyr, withr"
## tidyr "covr, jsonlite, knitr, repurrrsive (>= 1.0.0), rmarkdown,\nreadr, testthat (>= 2.1.0)"
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## tidyverse "covr, feather, glue, knitr, rmarkdown, testthat"
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## utf8 "knitr, rmarkdown, testthat"
## vctrs "bit64, covr, crayon, dplyr (>= 0.8.5), generics, knitr,\npillar (>= 1.4.4), pkgdown, rmarkdown, testthat (>= 2.3.0),\ntibble, withr, xml2, waldo (>= 0.2.0), zeallot"
## vioplot "base, ggplot2, RColorBrewer, knitr, rmarkdown, testthat"
## viridis "hexbin (>= 1.27.0), scales, MASS, knitr, dichromat,\ncolorspace, rasterVis, httr, mapproj, vdiffr, svglite (>=\n1.2.0), testthat, covr, rmarkdown, rgdal"
## viridisLite "hexbin (>= 1.27.0), ggplot2 (>= 1.0.1), testthat, covr"
## waldo "testthat (>= 3.0.0), covr, R6"
## webshot "httpuv, knitr, rmarkdown, shiny"
## whisker "markdown"
## withr "covr, DBI, knitr, lattice, methods, rmarkdown, RSQLite,\ntestthat (>= 2.1.0)"
## xfun "testit, parallel, codetools, rstudioapi, tinytex, mime,\nmarkdown, knitr, htmltools, remotes, pak, rmarkdown"
## xml2 "covr, curl, httr, knitr, magrittr, mockery, rmarkdown,\ntestthat (>= 2.1.0)"
## xopen "ps, testthat"
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## yaml "RUnit"
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## compiler NA
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## Matrix "expm, MASS"
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## gtable NA
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## hms NA
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## htmltools "knitr"
## htmlwidgets "shiny (>= 1.1)"
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## insight NA
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## pillar NA
## pkgbuild NA
## pkgconfig NA
## pkgload NA
## png NA
## praise NA
## prettyunits NA
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## promises NA
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## purrr NA
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## readxl NA
## relimp NA
## rematch NA
## rematch2 NA
## remotes NA
## reprex NA
## rgl NA
## rio NA
## rlang "winch"
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## rprojroot NA
## rsconnect NA
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## rversions NA
## rvest NA
## sandwich NA
## sass NA
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## selectr NA
## sem NA
## sessioninfo NA
## shiny NA
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## sp NA
## SparseM NA
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## stringr NA
## survey NA
## sys NA
## tcltk2 NA
## testthat NA
## TH.data NA
## tibble NA
## tidyr NA
## tidyselect NA
## tidyverse NA
## tinytex NA
## usethis NA
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## viridis NA
## viridisLite NA
## waldo NA
## webshot NA
## whisker NA
## withr NA
## xfun NA
## xml2 NA
## xopen NA
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## yaml NA
## zip NA
## zoo NA
## base NA
## boot NA
## class NA
## cluster NA
## codetools NA
## compiler NA
## datasets NA
## foreign NA
## graphics NA
## grDevices NA
## grid NA
## KernSmooth NA
## lattice "chron"
## MASS NA
## Matrix "MatrixModels, graph, SparseM, sfsmisc"
## methods NA
## mgcv NA
## nlme NA
## nnet NA
## parallel "snow, nws, Rmpi"
## rpart NA
## spatial NA
## splines NA
## stats NA
## stats4 NA
## survival NA
## tcltk NA
## tools NA
## translations NA
## utils NA
## License License_is_FOSS
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## aplpack "GPL (>= 2)" NA
## arm "GPL (> 2)" NA
## askpass "MIT + file LICENSE" NA
## assertthat "GPL-3" NA
## babynames "CC0" NA
## backports "GPL-2 | GPL-3" NA
## base64enc "GPL-2 | GPL-3" NA
## BH "BSL-1.0" NA
## BiocManager "Artistic-2.0" NA
## blob "GPL-3" NA
## brew "GPL-2" NA
## brio "MIT + file LICENSE" NA
## broom "MIT + file LICENSE" NA
## bslib "MIT + file LICENSE" NA
## cachem "MIT + file LICENSE" NA
## callr "MIT + file LICENSE" NA
## car "GPL (>= 2)" NA
## carData "GPL (>= 2)" NA
## cellranger "MIT + file LICENSE" NA
## checkmate "BSD_3_clause + file LICENSE" NA
## cli "MIT + file LICENSE" NA
## clipr "GPL-3" NA
## coda "GPL (>= 2)" NA
## colorspace "BSD_3_clause + file LICENSE" NA
## commandr "Artistic-2.0" NA
## commonmark "BSD_2_clause + file LICENSE" NA
## conquer "GPL-3" NA
## cpp11 "MIT + file LICENSE" NA
## crayon "MIT + file LICENSE" NA
## credentials "MIT + file LICENSE" NA
## crosstalk "MIT + file LICENSE" NA
## curl "MIT + file LICENSE" NA
## data.table "MPL-2.0 | file LICENSE" NA
## DBI "LGPL (>= 2.1)" NA
## dbplyr "MIT + file LICENSE" NA
## desc "MIT + file LICENSE" NA
## devtools "MIT + file LICENSE" NA
## diffobj "GPL (>= 2)" NA
## digest "GPL (>= 2)" NA
## dplyr "MIT + file LICENSE" NA
## e1071 "GPL-2 | GPL-3" NA
## effects "GPL (>= 2)" NA
## ellipsis "GPL-3" NA
## estimability "GPL (>= 3)" NA
## evaluate "MIT + file LICENSE" NA
## fansi "GPL (>= 2)" NA
## farver "MIT + file LICENSE" NA
## fastmap "MIT + file LICENSE" NA
## forcats "MIT + file LICENSE" NA
## Formula "GPL-2 | GPL-3" NA
## fs "GPL-3" NA
## generics "MIT + file LICENSE" NA
## gert "MIT + file LICENSE" NA
## ggplot2 "MIT + file LICENSE" NA
## gh "MIT + file LICENSE" NA
## gitcreds "MIT + file LICENSE" NA
## glue "MIT + file LICENSE" NA
## gridExtra "GPL (>= 2)" NA
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## haven "MIT + file LICENSE" NA
## highr "GPL" NA
## Hmisc "GPL (>= 2)" NA
## hms "MIT + file LICENSE" NA
## htmlTable "GPL (>= 3)" NA
## htmltools "GPL (>= 2)" NA
## htmlwidgets "MIT + file LICENSE" NA
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## httr "MIT + file LICENSE" NA
## ini "GPL-3" NA
## insight "GPL-3" NA
## isoband "MIT + file LICENSE" NA
## jpeg "GPL-2 | GPL-3" NA
## jquerylib "MIT + file LICENSE" NA
## jsonlite "MIT + file LICENSE" NA
## knitr "GPL" NA
## labeling "MIT + file LICENSE | Unlimited" NA
## later "GPL (>= 2)" NA
## latticeExtra "GPL (>= 2)" NA
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## leaps "GPL (>= 2)" NA
## lifecycle "MIT + file LICENSE" NA
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## lmtest "GPL-2 | GPL-3" NA
## lubridate "GPL (>= 2)" NA
## magrittr "MIT + file LICENSE" NA
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## mi "GPL (>= 2)" NA
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## mvtnorm "GPL-2" NA
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## nortest "GPL (>= 2)" NA
## numDeriv "GPL-2" NA
## openssl "MIT + file LICENSE" NA
## openxlsx "MIT + file LICENSE" NA
## packrat "GPL-2" NA
## pbkrtest "GPL (>= 2)" NA
## pillar "MIT + file LICENSE" NA
## pkgbuild "MIT + file LICENSE" NA
## pkgconfig "MIT + file LICENSE" NA
## pkgload "GPL-3" NA
## png "GPL-2 | GPL-3" NA
## praise "MIT + file LICENSE" NA
## prettyunits "MIT + file LICENSE" NA
## processx "MIT + file LICENSE" NA
## progress "MIT + file LICENSE" NA
## promises "MIT + file LICENSE" NA
## ps "MIT + file LICENSE" NA
## purrr "GPL-3 | file LICENSE" NA
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## R6 "MIT + file LICENSE" NA
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## tibble "MIT + file LICENSE" NA
## tidyr "MIT + file LICENSE" NA
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## readr NA NA NA "yes" "4.0.3"
## readstata13 NA NA NA "yes" "4.0.3"
## readxl NA NA NA "yes" "4.0.3"
## relimp NA NA NA "no" "4.0.3"
## rematch NA NA NA "no" "4.0.3"
## rematch2 NA NA NA "no" "4.0.3"
## remotes NA NA NA "no" "4.0.5"
## reprex NA NA NA "no" "4.0.4"
## rgl NA NA NA "yes" "4.0.4"
## rio NA NA NA "no" "4.0.3"
## rlang NA NA NA "yes" "4.0.3"
## rmarkdown NA NA NA "no" "4.0.5"
## roxygen2 NA NA NA "yes" "4.0.5"
## rprojroot NA NA NA "no" "4.0.3"
## rsconnect NA NA NA "no" "4.0.5"
## rstudioapi NA NA NA "no" "4.0.3"
## rversions NA NA NA "no" "4.0.5"
## rvest NA NA NA "no" "4.0.4"
## sandwich NA NA NA "no" "4.0.3"
## sass NA NA NA "yes" "4.0.3"
## scales NA NA NA "no" "4.0.3"
## selectr NA NA NA "no" "4.0.4"
## sem NA NA NA "yes" "4.0.3"
## sessioninfo NA NA NA "no" "4.0.5"
## shiny NA NA NA "no" "4.0.3"
## sm NA NA NA "yes" "4.0.5"
## sourcetools NA NA NA "yes" "4.0.3"
## sp NA NA NA "yes" "4.0.3"
## SparseM NA NA NA "yes" "4.0.3"
## statmod NA NA NA "yes" "4.0.3"
## stringi NA NA NA "yes" "4.0.3"
## stringr NA NA NA "no" "4.0.3"
## survey NA NA NA "no" "4.0.3"
## sys NA NA NA "yes" "4.0.4"
## tcltk2 NA NA NA "no" "4.0.3"
## testthat NA NA NA "yes" "4.0.4"
## TH.data NA NA NA "no" "4.0.3"
## tibble NA NA NA "yes" "4.0.3"
## tidyr NA NA NA "yes" "4.0.3"
## tidyselect NA NA NA "yes" "4.0.3"
## tidyverse NA NA NA "no" "4.0.4"
## tinytex NA NA NA "no" "4.0.3"
## usethis NA NA NA "no" "4.0.5"
## utf8 NA NA NA "yes" "4.0.3"
## vctrs NA NA NA "yes" "4.0.3"
## vioplot NA NA NA "no" "4.0.5"
## viridis NA NA NA "no" "4.0.3"
## viridisLite NA NA NA "no" "4.0.3"
## waldo NA NA NA "no" "4.0.3"
## webshot NA NA NA "no" "4.0.3"
## whisker NA NA NA "no" "4.0.5"
## withr NA NA NA "no" "4.0.3"
## xfun NA NA NA "yes" "4.0.3"
## xml2 NA NA NA "yes" "4.0.4"
## xopen NA NA NA "no" "4.0.5"
## xtable NA NA NA "no" "4.0.3"
## yaml NA NA NA "yes" "4.0.3"
## zip NA NA NA "yes" "4.0.3"
## zoo NA NA NA "yes" "4.0.3"
## base NA NA NA NA "4.0.3"
## boot NA NA NA "no" "4.0.3"
## class NA NA NA "yes" "4.0.3"
## cluster NA NA NA "yes" "4.0.3"
## codetools NA NA NA "no" "4.0.3"
## compiler NA NA NA NA "4.0.3"
## datasets NA NA NA NA "4.0.3"
## foreign NA NA NA "yes" "4.0.3"
## graphics NA NA NA "yes" "4.0.3"
## grDevices NA NA NA "yes" "4.0.3"
## grid NA NA NA "yes" "4.0.3"
## KernSmooth NA NA NA "yes" "4.0.3"
## lattice NA NA NA "yes" "4.0.3"
## MASS NA NA NA "yes" "4.0.3"
## Matrix NA NA NA "yes" "4.0.3"
## methods NA NA NA "yes" "4.0.3"
## mgcv NA NA NA "yes" "4.0.3"
## nlme NA NA NA "yes" "4.0.3"
## nnet NA NA NA "yes" "4.0.3"
## parallel NA NA NA "yes" "4.0.3"
## rpart NA NA NA "yes" "4.0.3"
## spatial NA NA NA "yes" "4.0.3"
## splines NA NA NA "yes" "4.0.3"
## stats NA NA NA "yes" "4.0.3"
## stats4 NA NA NA NA "4.0.3"
## survival NA NA NA "yes" "4.0.3"
## tcltk NA NA NA "yes" "4.0.3"
## tools NA NA NA "yes" "4.0.3"
## translations NA NA NA NA "4.0.3"
## utils NA NA NA "yes" "4.0.3"
Desinstalar un paquete es sencillo con la función remove.packages()
, en su caso:
# Eliminemos el paquete anteriormente instalado:
message("\n# Eliminemos el paquete anteriormente instalado:")
##
## # Eliminemos el paquete anteriormente instalado:
remove.packages("vioplot")
## Removing package from 'C:/Users/villa/OneDrive - Universidad Nacional de Colombia/Documentos (OneDrive-UNAL)/R/win-library/4.0'
## (as 'lib' is unspecified)
# Observemos si algún paquete neceista actualización:
message("\n# Observemos si algún paquete neceista actualización:")
##
## # Observemos si algún paquete neceista actualización:
cat("old.packages()")
## old.packages()
# Podemos actualizar algún paquete utilizando la siguiente sintaxis:
message("\n# Podemos actualizar algún paquete utilizando la siguiente sintaxis:")
##
## # Podemos actualizar algún paquete utilizando la siguiente sintaxis:
cat("\n \nupdate.packages()")
##
##
## update.packages()
cat("\n \nEsto actualizara todos los paquetes...")
##
##
## Esto actualizara todos los paquetes...
# Actualizar un paquete ya instalado en nuestro equipo o en linea:
print("# Actualizar un paquete ya instalado en nuestro equipo o en linea:")
## [1] "# Actualizar un paquete ya instalado en nuestro equipo o en linea:"
cat("\n \ninstall.packages(\"Package.Name\")")
##
##
## install.packages("Package.Name")
cat("\n\"Package.Name\" <= Nombre del paquete")
##
## "Package.Name" <= Nombre del paquete
Una vez instalado un paquete, está listo para utilizar sus funcionalidades. Si sólo necesita un uso esporádico de algunas funciones o datos dentro de un paquete, puede acceder a ellos con la notación packagename::functionname()
. Por ejemplo, ya que has instalado el paquete babynames, puedes explorar uno de sus conjuntos de datos.
recordamos cómo ver una visión general de qué funciones y datos contiene un paquete:
(paquete = “babynames”)
Para acceder al conjunto de datos de nacimientos dentro del paquete babynames
sólo tenemos que escribir:
# Descargemos una base de datos de nacimientos con su su respectio N° DE NACIMEINTO:
message("\n# Descargemos una base de datos de nacimientos con su su respectio N° DE NACIMEINTO:")
##
## # Descargemos una base de datos de nacimientos con su su respectio N° DE NACIMEINTO:
babynames::babynames
## # A tibble: 1,924,665 x 5
## year sex name n prop
## <dbl> <chr> <chr> <int> <dbl>
## 1 1880 F Mary 7065 0.0724
## 2 1880 F Anna 2604 0.0267
## 3 1880 F Emma 2003 0.0205
## 4 1880 F Elizabeth 1939 0.0199
## 5 1880 F Minnie 1746 0.0179
## 6 1880 F Margaret 1578 0.0162
## 7 1880 F Ida 1472 0.0151
## 8 1880 F Alice 1414 0.0145
## 9 1880 F Bertha 1320 0.0135
## 10 1880 F Sarah 1288 0.0132
## # ... with 1,924,655 more rows
Si va a hacer un uso más intensivo del paquete, entonces quizás valga la pena cargarlo en memoria. La forma más sencilla de hacerlo es con el comando library()
.
Tenga en cuenta que la entrada de install.packages()
es un vector de caracteres y requiere que el nombre esté entre comillas, mientras que library()
acepta tanto caracteres como nombres y le permite escribir el nombre del paquete sin comillas.
Después de esto, ya no necesita la notación package::function()
, y puede acceder directamente a sus funcionalidades como a cualquier otra función o dato base de R:
# Descargamos el paquete babynames:
message("\n# Descargamos el paquete babynames:")
##
## # Descargamos el paquete babynames:
library(babynames)
## Utilizamos una de sus funciones que nos arroja los nacimentos de los bebes:
message("\n## Utilizamos una de sus funciones que nos arroja los nacimentos de los bebes:")
##
## ## Utilizamos una de sus funciones que nos arroja los nacimentos de los bebes:
births
## # A tibble: 109 x 2
## year births
## <int> <int>
## 1 1909 2718000
## 2 1910 2777000
## 3 1911 2809000
## 4 1912 2840000
## 5 1913 2869000
## 6 1914 2966000
## 7 1915 2965000
## 8 1916 2964000
## 9 1917 2944000
## 10 1918 2948000
## # ... with 99 more rows