Version 4 nrcs graphs

1 Set up

1.1 1) Load packages

1.2 2) Import data

1.3 3) Data Wrangling

1.4 4) Theme James

2 Extra

2.1 Kansas Map

## Warning in f(...): True north is not meaningful without coord_sf()

2.2 Correlation Matrix

##  [1] "sample_name"       "location"          "treatment"        
##  [4] "depth"             "replication"       "bdepth"           
##  [7] "nhorizon"          "blk"               "horizon"          
## [10] "thorizon"          "rlanduse"          "landuse"          
## [13] "elevation"         "clay"              "temp"             
## [16] "precip"            "prec"              "ag"               
## [19] "tillage"           "nh4"               "no3"              
## [22] "t_np"              "t_nm"              "to_cp"            
## [25] "to_cg"             "ca"                "cu"               
## [28] "mg"                "mn"                "na"               
## [31] "p"                 "p_h"               "carbonate"        
## [34] "k"                 "zn"                "fe"               
## [37] "gwc"               "odad"              "bd"               
## [40] "ac"                "x20wsa2000"        "x20wsa250"        
## [43] "x20wsa53"          "x20wsa20"          "x20mwd"           
## [46] "x5wsa2000"         "x5wsa250"          "x5wsa53"          
## [49] "x5wsa20"           "x5mwd"             "nagg"             
## [52] "respiration"       "mb"                "gramp"            
## [55] "gramn"             "actin"             "amf"              
## [58] "fungi"             "fb"                "glucosidase"      
## [61] "glucosaminidase"   "acidphosphotase"   "alkphosphatase"   
## [64] "arylsulfatase"     "phosphodiesterase" "protein"

3 Biological Graphs

3.1 B-Glucosidase

## Warning: Ignoring unknown parameters: se

3.2 B-Glucosaminidase

## Warning: Ignoring unknown parameters: se

3.3 Acid Phosphatase

## Warning: Ignoring unknown parameters: se

3.4 Alkaline Phosphatase

## Warning: Ignoring unknown parameters: se

3.5 Arylsulfatase

## Warning: Ignoring unknown parameters: se

3.6 Phosphodiesterase

## Warning: Ignoring unknown parameters: se

3.7 Protein Content

## Warning: Ignoring unknown parameters: se

3.8 Permanganate Oxidizable Organic Carbon

## Warning: Ignoring unknown parameters: se

3.9 Soil Respiration

## Warning: Ignoring unknown parameters: se

4 Chemical Graphs

4.1 NH4+

## Warning: Ignoring unknown parameters: se

4.2 NO3-

## Warning: Ignoring unknown parameters: se

4.3 Total Nitrogen

## Warning: Ignoring unknown parameters: se

4.4 Total Organic Carbon

## Warning: Ignoring unknown parameters: se

4.5 Extractable Ca Content (g/kg)

## Warning: Ignoring unknown parameters: se

4.6 Extractable Cu Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.7 Extractable Mg Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.8 Extractable Mn Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.9 Extractable Na Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.10 Extractable P Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.11 Extractable K Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.12 Extractable Zn Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.13 Extractable Fe Content (mg/kg)

## Warning: Ignoring unknown parameters: se

4.14 pH

## Warning: Ignoring unknown parameters: se

4.15 Water Moisture

## Warning: Ignoring unknown parameters: se

5 Physical graphs

5.1 Clay

## Warning: Ignoring unknown parameters: se

5.2 20 minute MWD

## Warning: Ignoring unknown parameters: se

5.3 5 minute MWD

## Warning: Ignoring unknown parameters: se

## Warning: Removed 56 row(s) containing missing values (geom_path).

## Warning: Removed 120 rows containing missing values (geom_point).

## Warning: Removed 120 rows containing missing values (geom_point).

5.4 NRCS hand method

## Warning: Ignoring unknown parameters: se

## Warning: Removed 28 row(s) containing missing values (geom_path).

## Warning: Removed 28 rows containing missing values (geom_point).

## Warning: Removed 28 rows containing missing values (geom_point).

5.5 Bulk Density

## Warning: Ignoring unknown parameters: se

## Warning: Removed 28 row(s) containing missing values (geom_path).

## Warning: Removed 28 rows containing missing values (geom_point).

## Warning: Removed 28 rows containing missing values (geom_point).

6 Ratio Graphs

6.1 Total Organic Carbon to Nitrogen

## Warning: Ignoring unknown parameters: se

6.2 Soil Respiration to Total Organic Carbon

## Warning: Ignoring unknown parameters: se

6.3 Protein to Total Nitrogen

## Warning: Ignoring unknown parameters: se

6.4 Soil Respiration to Total Organic Carbon

## Warning: Ignoring unknown parameters: se

6.5 Glucosidase to Glucosaminidase ratio

## Warning: Ignoring unknown parameters: se

6.6 Glucosidase to Acid Phosphotase ratio

## Warning: Ignoring unknown parameters: se

6.7 Glucosidase to Alkaline Phosphatase ratio

## Warning: Ignoring unknown parameters: se

6.8 Glucosidase to Arylsulfatase ratio

## Warning: Ignoring unknown parameters: se

6.9 Glucosidase to Phosphodiesterase ratio

## Warning: Ignoring unknown parameters: se

Joined Graph

grid.arrange(spp_weight_boxplot, spp_count_plot, ncol = 2, widths = c(4, 6))

ggsave(“fiv.png”, fiv, width = 15, height = 10)