Summary

When analyzing health data, it is very important to define control groups. The definition of control groups can be quite challenging and often times a limitation for large-scale data mining projects.

Let’s say that we want to analyze a set of observations for patients with end stage kidney disease with the goal of establishing an early diagnosis.

We may want to know what type of observations are more often found in this population. In order to do this analysis, we need a good control group, preferable composed of precursors or populations that may be at a high risk for developing the disease of interest.

The purpose of this project is to build a database of diseases and other related diseases by scraping a well-known clinical-literature search engine such as PubMed.

The assumption is that if a publication contains references to conditions A and B, there may be a relationship between these two. If the above it is true for a large number of publications, it may suggest that the disease combination could be a good candidate for further analysis.

We will use disease terms found in ICD9 classification data.

The goal is to obtain frequency counts of: * Individual disease terms: Diabetes, Cancer, HIV, etc. * All disease terms combinations: Diabetes AND Cancer, Diabetes AND HIV, etc.


The Libraries

library(RCurl)
library(XML)
library(rvest)
library(knitr)
library(plyr)
library(stringr)
library(rmongodb)
library(rjson)
library(tm)

Loading Diesease Phrases

The Healthcare Utilization Project (HCUP) has an ICD9 classification data available in their website.

There is one file in particular that contains diagnosis category names. This list is great as the disease labels are in plain english.

A CSV version of this file is available in the Single-Level Diagnosis CCS Categories. This is the data that we will use as our list of diseases.

# get files diagnosis category label from CSV in github
dxref <- "https://raw.githubusercontent.com/rmalarc/is607/master/final_project/Single_Level_CCS_2015/dxlabel%202013.csv"
dxref_data_csv <- getURL(dxref)
dxref_data <- read.csv(text=dxref_data_csv,head=TRUE,sep=",",as.is=TRUE)

#clean up column names and turn to lower_case
colnames(dxref_data)<-tolower(gsub("\\.","_",colnames(dxref_data)))

kable(summary(dxref_data))
ccs_diagnosis_categories ccs_diagnosis_categories_labels
Length:288 Length:288
Class :character Class :character
Mode :character Mode :character
kable(head(dxref_data,n=25))
ccs_diagnosis_categories ccs_diagnosis_categories_labels
.Z Overall
. No diagnosis
.A Invalid diagnosis
1 Tuberculosis
2 Septicemia (except in labor)
3 Bacterial infection; unspecified site
4 Mycoses
5 HIV infection
6 Hepatitis
7 Viral infection
8 Other infections; including parasitic
9 Sexually transmitted infections (not HIV or hepatitis)
10 Immunizations and screening for infectious disease
11 Cancer of head and neck
12 Cancer of esophagus
13 Cancer of stomach
14 Cancer of colon
15 Cancer of rectum and anus
16 Cancer of liver and intrahepatic bile duct
17 Cancer of pancreas
18 Cancer of other GI organs; peritoneum
19 Cancer of bronchus; lung
20 Cancer; other respiratory and intrathoracic
21 Cancer of bone and connective tissue
22 Melanomas of skin

Preparing the Disease Terms

In order to use the disease terms we need to:

# flag those terms that appear to be invalid
dxref_data$is_valid <- TRUE
dxref_data[dxref_data$ccs_diagnosis_categories %in%
             c(".Z  ",".   ",".A  ","254","255","256","257","258","259"),"is_valid"] <-FALSE 
dxref_data[grep("E Codes: ",dxref_data$ccs_diagnosis_categories_labels),"is_valid"] <-FALSE 

# gsub helper function
toString <- content_transformer(function(x, from, to) gsub(from, to, x))

#load data into corpus
dxref_data_corpus <- Corpus(VectorSource(dxref_data[2]))

#remove numbers
dxref_data_corpus <- tm_map(dxref_data_corpus, removeNumbers)

# to lowercase
dxref_data_corpus <- tm_map(dxref_data_corpus, content_transformer(tolower))

# Hyphens to spaces
dxref_data_corpus <- tm_map(dxref_data_corpus, toString, "-", " ")

# remove the stuff in parentesis
dxref_data_corpus <- tm_map(dxref_data_corpus, toString, "\\(.+\\)", "")

# replace / or - for whitespace
dxref_data_corpus <- tm_map(dxref_data_corpus, toString, "(/|-)", " ")

#remove punctuation
dxref_data_corpus <- tm_map(dxref_data_corpus, removePunctuation)


# remove english stop words
dxref_data_corpus <- tm_map(dxref_data_corpus, removeWords, stopwords("english"))

# strip double white spaces
dxref_data_corpus <- tm_map(dxref_data_corpus, toString, "^\\s+|\\s+$", "")
dxref_data_corpus <- tm_map(dxref_data_corpus, toString, "  ", " ")
dxref_data_corpus <- tm_map(dxref_data_corpus, stripWhitespace)

# merge with dataframe
dxref_data$disease_phrase <- dxref_data_corpus[["1"]][["content"]]
dxref_data$disease_phrase <- gsub(" "," AND ",dxref_data$disease_phrase)
dxref_data$url_params <- sapply(dxref_data$disease_phrase,URLencode)

Helper Functions

In order to facilitate scraping more than one page, we will use the following functions:

####################################################################################
# pubmed_entries_for(URLParams)
#
# This function scrapes pubmed by searching for the specified URL encoded keyword.
# The function returns the number of entries in pubmed for the keyword.
####################################################################################

pubmed_entries_for <-function(URLParams) {
  Sys.sleep(0.5)
  baseURL <- "http://www.ncbi.nlm.nih.gov/pubmed?term="
  theURL <- paste(baseURL,URLParams,sep="")
  page_data <- html(theURL)

  pubmed_results<- page_data %>% 
      html_nodes(xpath='//h2[contains(@class,"result_count")]')

  pubmed_results<- sapply(pubmed_results,xmlValue)

  if(length(pubmed_results) > 0){
    pubmed_results<-as.integer(str_extract(pubmed_results[1],"[0-9]+$"))
  } else {
    pubmed_results <- 0
  }

  return(pubmed_results)
}

####################################################################################
# scrape_pubmed_entries(ref_data, entry_type)
#
# This function accepts a dataframe containing the entries to process as well as an entry_type.
# The DF must contain a column called url_params, which are the URL parameters passed to
# pubmed_entries_for.
# 
# The processed output is saved to MongoDB and returned as a dataframe
####################################################################################
scrape_pubmed_entries <- function(ref_data,entry_type) {
  #ref_data<-dxref_data_x_join
  #entry_type<-"intersect_count"
  
  coll<-paste(ns,entry_type,sep=".")

  # get previously exported records
  entries_processed <- NULL
  cursor<-mongo.find(m
                     ,coll
                     ,query = mongo.bson.empty()
                     ,fields=list(url_params=1L)
                     )
  entries_processed <- mongo.cursor.to.data.frame(cursor)
  mongo.cursor.destroy(cursor)

  # process records not already processed
  entries_to_process <- ref_data[!(ref_data$url_params %in% entries_processed$url_params),]

  if(nrow(entries_to_process)>0){
    for (i in 1:nrow(entries_to_process)){
      entry<-entries_to_process[i,]
      # get the number of hits for entry in pubmed
      hits<-pubmed_entries_for(entry$url_params)

      # resulting DF
      results<-entry
      results$entry_type <- entry_type
      results$hits<-hits

      # export to mongo
      mongo.insert(m, coll,mongo.bson.from.JSON(toJSON(results)))
    }
  }
  
  # get all processed entries
  cursor <- mongo.find(m
                       ,coll
                       ,query = mongo.bson.empty()
                       )
  entries_processed <- mongo.cursor.to.data.frame(cursor)
  mongo.cursor.destroy(cursor)

  return(entries_processed)
}

Scraping the Pubmed Search Engine

Getting Frequency Counts of Individual Disease Terms

# connect to monogo so we can export the results of the scrape a row at a time
m <- mongo.create()
ns <- "scrape_pubmed"


# yes, it's a loop. The apply functions are faster. However, the function gets delayed by a sec
# each time. The loop allows me to restart where I left off
entries_processed <- NULL

# If you want to restart the whole process from scratch, set restart to TRUE
restart <- FALSE
if (restart){
  #delete all previously processed entries by purging the contents of the MongoDB
  mongo.remove(m, ns) 
}

absolute_count_entries_processed <- scrape_pubmed_entries(dxref_data[dxref_data$is_valid,],"absolute_count")
## Warning in mongo.cursor.to.data.frame(cursor): This fails for most NoSQL
## data structures. I am working on a new solution
## Warning in mongo.cursor.to.data.frame(cursor): This fails for most NoSQL
## data structures. I am working on a new solution
# show a sample of the output
#kable(head(absolute_count_entries_processed,n=25))

Getting Frequency Counts of Disease Term Combinations (ie: tuberculosis AND hiv)

# x-join all the VALID terms
dxref_data_x_join <- merge(x = absolute_count_entries_processed[absolute_count_entries_processed$is_valid&(absolute_count_entries_processed$hits>0),]
                           , y = absolute_count_entries_processed[absolute_count_entries_processed$is_valid&(absolute_count_entries_processed$hits>0),]
                           , by = NULL)

dxref_data_x_join$ccs_diagnosis_categories.x<-as.character(dxref_data_x_join$ccs_diagnosis_categories.x)
dxref_data_x_join$ccs_diagnosis_categories.y<-as.character(dxref_data_x_join$ccs_diagnosis_categories.y)

#Remove permutations, we just want combinations
dxref_data_x_join <- dxref_data_x_join[dxref_data_x_join$ccs_diagnosis_categories.x
                                       >dxref_data_x_join$ccs_diagnosis_categories.y,]

# generate combined URL parameters
dxref_data_x_join$url_params <- sprintf("(%s)AND(%s)",dxref_data_x_join$url_params.x,dxref_data_x_join$url_params.y)

#scrape pubmed
intersect_count_entries_processed <- scrape_pubmed_entries(dxref_data_x_join,"intersect_count")
## Warning in mongo.cursor.to.data.frame(cursor): This fails for most NoSQL
## data structures. I am working on a new solution
## Warning in mongo.cursor.to.data.frame(cursor): This fails for most NoSQL
## data structures. I am working on a new solution
#show a sample of the output
#kable(head(intersect_count_entries_processed,n=25))

Individual Disease Terms Sorted by Absolute Frequency

# Estimate the total number of UNIQUE documents
total_number_of_documents<-sum(absolute_count_entries_processed[absolute_count_entries_processed$is_valid,"hits"])*0.5


absolute_count_entries_processed$p_hit <- absolute_count_entries_processed$hits/total_number_of_documents

kable(
  absolute_count_entries_processed[
    order(-absolute_count_entries_processed$p_hit)
    ,c("ccs_diagnosis_categories_labels"
       ,"hits"
       ,"p_hit"
      )
    ]
)
ccs_diagnosis_categories_labels hits p_hit
101 Secondary malignancies 325763 0.0790043
83 Cancer of breast 299830 0.0727150
208 Other liver diseases 281580 0.0682890
98 Leukemias 267744 0.0649335
66 Viral infection 224547 0.0544573
60 Tuberculosis 218038 0.0528788
236 Other complications of pregnancy 208181 0.0504882
65 Hepatitis 204240 0.0495325
7 Shock 193997 0.0470483
2 Other fractures 186569 0.0452469
112 Disorders of lipid metabolism 154206 0.0373982
14 Asthma 149683 0.0363012
166 Cardiac dysrhythmias 148992 0.0361337
255 Other skin disorders 145285 0.0352346
61 Septicemia (except in labor) 144864 0.0351325
131 Mood disorders 138547 0.0336005
155 Other nervous system disorders 127493 0.0309197
181 Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 121027 0.0293516
64 HIV infection 120652 0.0292606
31 Other congenital anomalies 114634 0.0278011
88 Cancer of prostate 111998 0.0271618
63 Mycoses 106738 0.0258862
132 Personality disorders 103325 0.0250585
11 Other eye disorders 97891 0.0237406
72 Cancer of stomach 97866 0.0237345
116 Immunity disorders 96838 0.0234852
109 Diabetes mellitus with complications 95897 0.0232570
145 Paralysis 94899 0.0230150
135 Substance-related disorders 89479 0.0217005
73 Cancer of colon 89012 0.0215873
212 Other gastrointestinal disorders 86766 0.0210426
125 Anxiety disorders 84296 0.0204435
13 Influenza 82401 0.0199840
70 Cancer of head and neck 79464 0.0192717
3 Burns 79321 0.0192370
124 Adjustment disorders 76870 0.0186426
110 Other endocrine disorders 76097 0.0184551
160 Acute myocardial infarction 75580 0.0183297
146 Epilepsy; convulsions 74235 0.0180035
8 Abdominal pain 73058 0.0177181
177 Other circulatory disease 68297 0.0165634
215 Chronic kidney disease 67379 0.0163408
91 Cancer of bladder 67232 0.0163052
20 Osteoporosis 66792 0.0161984
143 Multiple sclerosis 64345 0.0156050
139 Meningitis (except that caused by tuberculosis or sexually transmitted disease) 64255 0.0155832
128 Developmental disorders 63644 0.0154350
95 Cancer of thyroid 61217 0.0148464
17 Osteoarthritis 60180 0.0145949
9 Cataract 59265 0.0143730
142 Parkinson`s disease 58753 0.0142488
163 Pulmonary heart disease 57407 0.0139224
140 Encephalitis (except that caused by tuberculosis or sexually transmitted disease) 56978 0.0138184
209 Pancreatic disorders (not diabetes) 56567 0.0137187
10 Glaucoma 55934 0.0135652
40 Spinal cord injury 54963 0.0133297
216 Urinary tract infections 50975 0.0123625
192 Intestinal infection 49620 0.0120339
229 Female infertility 48658 0.0118006
107 Thyroid disorders 46563 0.0112925
134 Alcohol-related disorders 44263 0.0107347
210 Gastrointestinal hemorrhage 42753 0.0103685
115 Cystic fibrosis 41838 0.0101466
96 Hodgkin`s disease 41421 0.0100455
99 Multiple myeloma 39536 0.0095883
76 Cancer of pancreas 39050 0.0094704
86 Cancer of ovary 38879 0.0094290
81 Melanomas of skin 37949 0.0092034
85 Cancer of cervix 35741 0.0086679
156 Heart valve disorders 35141 0.0085224
35 Respiratory distress syndrome 35068 0.0085047
84 Cancer of uterus 35012 0.0084911
68 Sexually transmitted infections (not HIV or hepatitis) 34651 0.0084036
57 Nausea and vomiting 32254 0.0078223
195 Esophageal disorders 30891 0.0074917
71 Cancer of esophagus 30396 0.0073717
118 Deficiency and other anemia 29922 0.0072567
158 Essential hypertension 28583 0.0069320
233 Induced abortion 28317 0.0068675
21 Pathological fracture 25290 0.0061334
23 Other acquired deformities 22528 0.0054635
50 Complications of surgical procedures or medical care 22096 0.0053587
165 Conduction disorders 21708 0.0052646
15 Endometriosis 21526 0.0052205
59 Allergic reactions 20598 0.0049954
120 Sickle cell anemia 20104 0.0048756
232 Spontaneous abortion 19546 0.0047403
97 Non-Hodgkin`s lymphoma 19134 0.0046404
45 Intracranial injury 18736 0.0045439
228 Menopausal disorders 18449 0.0044743
190 Other lower respiratory disease 17467 0.0042361
94 Cancer of brain and nervous system 17424 0.0042257
25 Other connective tissue disease 17077 0.0041415
4 Syncope 16672 0.0040433
161 Coronary atherosclerosis and other heart disease 16308 0.0039550
89 Cancer of testis 16100 0.0039046
221 Hyperplasia of prostate 16097 0.0039039
133 Schizophrenia and other psychotic disorders 15867 0.0038481
44 Sprains and strains 15255 0.0036997
16 Ovarian cyst 15249 0.0036982
235 Ectopic pregnancy 15019 0.0036424
230 Other female genital disorders 14107 0.0034212
200 Abdominal hernia 14062 0.0034103
6 Gangrene 13925 0.0033771
253 Other inflammatory condition of skin 13804 0.0033478
5 Lymphadenitis 13792 0.0033448
172 Transient cerebral ischemia 13531 0.0032815
251 Normal pregnancy and/or delivery 12867 0.0031205
227 Menstrual disorders 12599 0.0030555
184 Other upper respiratory infections 12420 0.0030121
29 Genitourinary congenital anomalies 11812 0.0028647
240 Prolonged pregnancy 11626 0.0028195
1 Birth trauma 11058 0.0026818
122 Diseases of white blood cells 10273 0.0024914
191 Other upper respiratory disease 9213 0.0022343
28 Digestive congenital anomalies 9122 0.0022123
78 Cancer of bronchus; lung 8894 0.0021570
53 Poisoning by other medications and drugs 8775 0.0021281
159 Hypertension with complications and secondary hypertension 8747 0.0021213
127 Delirium, dementia, and amnestic and other cognitive disorders 8506 0.0020629
67 Other infections; including parasitic 8309 0.0020151
52 Poisoning by psychotropic agents 8256 0.0020023
223 Other male genital disorders 7911 0.0019186
206 Biliary tract disease 7246 0.0017573
169 Acute cerebrovascular disease 6958 0.0016875
167 Cardiac arrest and ventricular fibrillation 6736 0.0016336
39 Fracture of neck of femur (hip) 6386 0.0015487
183 Acute bronchitis 6384 0.0015483
196 Gastroduodenal ulcer (except hemorrhage) 6022 0.0014605
123 Other hematologic conditions 5703 0.0013831
12 Hemorrhoids 5684 0.0013785
75 Cancer of liver and intrahepatic bile duct 5622 0.0013635
56 Fever of unknown origin 5497 0.0013331
217 Calculus of urinary tract 5393 0.0013079
257 Rheumatoid arthritis and related disease 5312 0.0012883
114 Fluid and electrolyte disorders 5132 0.0012446
111 Nutritional deficiencies 4692 0.0011379
218 Other diseases of kidney and ureters 4008 0.0009720
151 Inflammation; infection of eye (except that caused by tuberculosis or sexually transmitteddisease) 3967 0.0009621
43 Fracture of lower limb 3668 0.0008896
121 Coagulation and hemorrhagic disorders 3557 0.0008626
30 Nervous system congenital anomalies 3429 0.0008316
37 Other perinatal conditions 3236 0.0007848
254 Chronic ulcer of skin 3217 0.0007802
193 Disorders of teeth and jaw 3003 0.0007283
93 Cancer of other urinary organs 3000 0.0007276
249 Forceps delivery 2983 0.0007234
219 Other diseases of bladder and urethra 2866 0.0006951
138 Miscellaneous disorders 2839 0.0006885
92 Cancer of kidney and renal pelvis 2820 0.0006839
198 Other disorders of stomach and duodenum 2807 0.0006808
207 Liver disease; alcohol-related 2734 0.0006631
74 Cancer of rectum and anus 2656 0.0006441
22 Acquired foot deformities 2544 0.0006170
126 Attention-deficit, conduct, and disruptive behavior disorders 2486 0.0006029
24 Systemic lupus erythematosus and connective tissue disorders 2479 0.0006012
178 Phlebitis; thrombophlebitis and thromboembolism 2411 0.0005847
82 Other non-epithelial cancer of skin 2392 0.0005801
105 Benign neoplasm of uterus 2194 0.0005321
203 Diverticulosis and diverticulitis 2037 0.0004940
48 Open wounds of extremities 2028 0.0004918
32 Liveborn 1955 0.0004741
42 Fracture of upper limb 1860 0.0004511
179 Varicose veins of lower extremity 1750 0.0004244
252 Skin and subcutaneous tissue infections 1665 0.0004038
27 Cardiac and circulatory congenital anomalies 1490 0.0003614
244 Previous C-section 1475 0.0003577
69 Immunizations and screening for infectious disease 1465 0.0003553
150 Blindness and vision defects 1465 0.0003553
234 Postabortion complications 1445 0.0003504
80 Cancer of bone and connective tissue 1402 0.0003400
147 Headache; including migraine 1394 0.0003381
41 Skull and face fractures 1340 0.0003250
104 Maintenance chemotherapy; radiotherapy 1315 0.0003189
180 Other diseases of veins and lymphatics 1254 0.0003041
197 Gastritis and duodenitis 1162 0.0002818
87 Cancer of other female genital organs 998 0.0002420
205 Peritonitis and intestinal abscess 771 0.0001870
58 Malaise and fatigue 682 0.0001654
185 Chronic obstructive pulmonary disease and bronchiectasis 668 0.0001620
113 Gout and other crystal arthropathies 625 0.0001516
18 Other non-traumatic joint disorders 542 0.0001314
162 Nonspecific chest pain 447 0.0001084
117 Other nutritional; endocrine; and metabolic disorders 446 0.0001082
90 Cancer of other male genital organs 386 0.0000936
26 Other bone disease and musculoskeletal deformities 338 0.0000820
182 Acute and chronic tonsillitis 322 0.0000781
79 Cancer; other respiratory and intrathoracic 317 0.0000769
204 Anal and rectal conditions 314 0.0000762
173 Late effects of cerebrovascular disease 312 0.0000757
247 Umbilical cord complication 300 0.0000728
188 Respiratory failure; insufficiency; arrest (adult) 293 0.0000711
164 Other and ill-defined heart disease 285 0.0000691
38 Joint disorders and dislocations; trauma-related 278 0.0000674
225 Inflammatory diseases of female pelvic organs 222 0.0000538
49 Complication of device; implant or graft 211 0.0000512
100 Cancer; other and unspecified primary 208 0.0000504
213 Nephritis; nephrosis; renal sclerosis 203 0.0000492
201 Regional enteritis and ulcerative colitis 188 0.0000456
239 Early or threatened labor 172 0.0000417
237 Hemorrhage during pregnancy; abruptio placenta; placenta previa 143 0.0000347
154 Other ear and sense organ disorders 140 0.0000340
176 Aortic and peripheral arterial embolism or thrombosis 138 0.0000335
51 Superficial injury; contusion 124 0.0000301
152 Otitis media and related conditions 119 0.0000289
33 Short gestation; low birth weight; and fetal growth retardation 103 0.0000250
141 Other CNS infection and poliomyelitis 103 0.0000250
129 Disorders usually diagnosed in infancy, childhood, or adolescence 98 0.0000238
153 Conditions associated with dizziness or vertigo 95 0.0000230
211 Noninfectious gastroenteritis 92 0.0000223
34 Intrauterine hypoxia and birth asphyxia 82 0.0000199
174 Peripheral and visceral atherosclerosis 81 0.0000196
106 Other and unspecified benign neoplasm 80 0.0000194
224 Nonmalignant breast conditions 78 0.0000189
256 Infective arthritis and osteomyelitis (except that caused by tuberculosis or sexually transmitted disease) 78 0.0000189
175 Aortic; peripheral; and visceral artery aneurysms 68 0.0000165
242 Malposition; malpresentation 67 0.0000162
171 Other and ill-defined cerebrovascular disease 66 0.0000160
199 Appendicitis and other appendiceal conditions 59 0.0000143
226 Prolapse of female genital organs 50 0.0000121
194 Diseases of mouth; excluding dental 48 0.0000116
46 Crushing injury or internal injury 43 0.0000104
119 Acute posthemorrhagic anemia 31 0.0000075
47 Open wounds of head; neck; and trunk 30 0.0000073
136 Suicide and intentional self-inflicted injury 23 0.0000056
220 Genitourinary symptoms and ill-defined conditions 19 0.0000046
36 Hemolytic jaundice and perinatal jaundice 18 0.0000044
214 Acute and unspecified renal failure 16 0.0000039
144 Other hereditary and degenerative nervous system conditions 13 0.0000032
148 Coma; stupor; and brain damage 13 0.0000032
19 Spondylosis; intervertebral disc disorders; other back problems 10 0.0000024
77 Cancer of other GI organs; peritoneum 8 0.0000019
187 Pleurisy; pneumothorax; pulmonary collapse 6 0.0000015
231 Contraceptive and procreative management 6 0.0000015
168 Congestive heart failure; nonhypertensive 5 0.0000012
170 Occlusion or stenosis of precerebral arteries 5 0.0000012
149 Retinal detachments; defects; vascular occlusion; and retinopathy 4 0.0000010
222 Inflammatory conditions of male genital organs 3 0.0000007
62 Bacterial infection; unspecified site 2 0.0000005
186 Aspiration pneumonitis; food/vomitus 2 0.0000005
250 Other complications of birth; puerperium affecting management of mother 2 0.0000005
54 Poisoning by nonmedicinal substances 0 0.0000000
55 Other injuries and conditions due to external causes 0 0.0000000
102 Malignant neoplasm without specification of site 0 0.0000000
103 Neoplasms of unspecified nature or uncertain behavior 0 0.0000000
108 Diabetes mellitus without complication 0 0.0000000
130 Impulse control disorders, NEC 0 0.0000000
137 Screening and history of mental health and substance abuse codes 0 0.0000000
157 Peri-; endo-; and myocarditis; cardiomyopathy (except that caused by tuberculosis or sexually transmitted disease) 0 0.0000000
189 Lung disease due to external agents 0 0.0000000
202 Intestinal obstruction without hernia 0 0.0000000
238 Hypertension complicating pregnancy; childbirth and the puerperium 0 0.0000000
241 Diabetes or abnormal glucose tolerance complicating pregnancy; childbirth; or the puerperium 0 0.0000000
243 Fetopelvic disproportion; obstruction 0 0.0000000
245 Fetal distress and abnormal forces of labor 0 0.0000000
246 Polyhydramnios and other problems of amniotic cavity 0 0.0000000
248 OB-related trauma to perineum and vulva 0 0.0000000

Top-500 Disease Term Combinations Sorted by Absolute Frequency

summary<-intersect_count_entries_processed[c("ccs_diagnosis_categories_labels.x"
                                             ,"ccs_diagnosis_categories_labels.y"
                                             ,"url_params"
                                             ,"hits.x"
                                             ,"hits.y"
                                             ,"hits")]

summary$p_intersect_given_xy<-summary$hits/(summary$hits.x+summary$hits.y)


summary$p_intersect<-summary$hits/total_number_of_documents

kable(
  head(
    summary[
      order(-summary$p_intersect)
      ,c("ccs_diagnosis_categories_labels.x"
         ,"ccs_diagnosis_categories_labels.y"
         ,"hits.x"
         ,"hits.y"
         ,"hits"
         ,"p_intersect_given_xy"
         ,"p_intersect"
         )
      ]
    ,n=500
    )
  )
ccs_diagnosis_categories_labels.x ccs_diagnosis_categories_labels.y hits.x hits.y hits p_intersect_given_xy p_intersect
16413 Hepatitis Other liver diseases 204207 281545 51249 0.1055045 0.0124289
3084 Secondary malignancies Cancer of breast 325699 299768 49843 0.0796893 0.0120880
519 Viral infection HIV infection 224492 120631 46126 0.1336509 0.0111865
573 Viral infection Hepatitis 224492 204207 39672 0.0925405 0.0096213
376 Shock Septicemia (except in labor) 193946 144834 30269 0.0893471 0.0073409
5648 Substance-related disorders Alcohol-related disorders 89475 44257 23367 0.1747301 0.0056670
24243 Other fractures Osteoporosis 186529 66779 20930 0.0826267 0.0050760
24371 Other fractures Pathological fracture 186529 25288 19753 0.0932550 0.0047905
4037 Non-Hodgkin`s lymphoma Hodgkin`s disease 19130 41418 18830 0.3109929 0.0045667
16451 Disorders of lipid metabolism Other liver diseases 154188 281545 17292 0.0396849 0.0041937
16443 Secondary malignancies Other liver diseases 325699 281545 16657 0.0274305 0.0040397
1392 Secondary malignancies Cancer of stomach 325699 97846 16543 0.0390584 0.0040120
5385 Personality disorders Anxiety disorders 103317 84284 16371 0.0872650 0.0039703
3979 Thyroid disorders Cancer of thyroid 46553 61207 16135 0.1497309 0.0039131
5384 Mood disorders Anxiety disorders 138517 84284 15666 0.0703139 0.0037993
4589 Other endocrine disorders Thyroid disorders 76089 46553 15400 0.1255687 0.0037348
11237 Viral infection Influenza 224492 82385 15237 0.0496518 0.0036953
3485 Secondary malignancies Cancer of prostate 325699 111972 14644 0.0334589 0.0035515
16414 Viral infection Other liver diseases 224492 281545 14350 0.0283576 0.0034802
5348 Personality disorders Adjustment disorders 103317 76856 13870 0.0769816 0.0033638
3071 Cancer of prostate Cancer of breast 111972 299768 13751 0.0333973 0.0033349
949 Secondary malignancies Cancer of head and neck 325699 79442 13506 0.0333365 0.0032755
23150 Other skin disorders Other inflammatory condition of skin 145255 13801 13104 0.0823861 0.0031780
3159 Cancer of cervix Cancer of uterus 35740 35011 12206 0.1725205 0.0029602
1597 Secondary malignancies Cancer of colon 325699 88995 11852 0.0285801 0.0028744
25339 Other congenital anomalies Genitourinary congenital anomalies 114619 11812 11812 0.0934265 0.0028647
5555 Personality disorders Mood disorders 103317 138517 11371 0.0470199 0.0027577
521 Sexually transmitted infections (not HIV or hepatitis) HIV infection 34644 120631 11323 0.0729222 0.0027461
518 Hepatitis HIV infection 204207 120631 11252 0.0346388 0.0027288
3975 Secondary malignancies Cancer of thyroid 325699 61207 10987 0.0283971 0.0026646
16867 Other gastrointestinal disorders Gastrointestinal hemorrhage 86745 42743 10898 0.0841622 0.0026430
11020 Mycoses Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 106711 121004 10542 0.0462947 0.0025567
5589 Substance-related disorders Personality disorders 89475 103317 10485 0.0543850 0.0025428
1579 Cancer of breast Cancer of colon 299768 88995 10418 0.0267978 0.0025266
4997 Viral infection Immunity disorders 224492 96804 10179 0.0316811 0.0024686
2309 Secondary malignancies Melanomas of skin 325699 37939 9791 0.0269251 0.0023745
16502 Other gastrointestinal disorders Other liver diseases 86745 281545 9648 0.0261967 0.0023398
4170 Secondary malignancies Leukemias 325699 267725 9618 0.0162076 0.0023326
16602 Cancer of pancreas Pancreatic disorders (not diabetes) 39043 56562 9599 0.1004027 0.0023280
4 HIV infection Tuberculosis 120631 218021 9596 0.0283359 0.0023272
5972 Other eye disorders Glaucoma 97876 55921 9368 0.0609115 0.0022719
23347 Melanomas of skin Other skin disorders 37939 145255 9363 0.0511098 0.0022707
5757 Encephalitis (except that caused by tuberculosis or sexually transmitted disease) Meningitis (except that caused by tuberculosis or sexually transmitted disease) 56967 64243 9320 0.0768913 0.0022603
11018 Septicemia (except in labor) Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 144834 121004 9297 0.0349724 0.0022547
25220 Other congenital anomalies Digestive congenital anomalies 114619 9122 9122 0.0737185 0.0022123
620 Encephalitis (except that caused by tuberculosis or sexually transmitted disease) Viral infection 56967 224492 8970 0.0318697 0.0021754
16499 Pancreatic disorders (not diabetes) Other liver diseases 56562 281545 8950 0.0264709 0.0021706
16633 Other endocrine disorders Pancreatic disorders (not diabetes) 76089 56562 8759 0.0660304 0.0021242
1147 Cancer of stomach Cancer of esophagus 97846 30389 8693 0.0677896 0.0021082
21466 Viral infection Other complications of pregnancy 224492 208159 8399 0.0194129 0.0020369
5410 Other nervous system disorders Anxiety disorders 127472 84284 8211 0.0387758 0.0019913
5860 Other nervous system disorders Multiple sclerosis 127472 64331 8161 0.0425489 0.0019792
21577 Other congenital anomalies Other complications of pregnancy 114619 208159 8114 0.0251380 0.0019678
21464 HIV infection Other complications of pregnancy 120631 208159 8035 0.0244381 0.0019487
5342 Anxiety disorders Adjustment disorders 84284 76856 7968 0.0494477 0.0019324
5946 Glaucoma Cataract 55921 59259 7946 0.0689877 0.0019271
26674 Paralysis Spinal cord injury 94889 54947 7916 0.0528311 0.0019198
3701 Secondary malignancies Cancer of bladder 325699 67224 7756 0.0197392 0.0018810
3475 Cancer of bladder Cancer of prostate 67224 111972 7739 0.0431873 0.0018769
76 Meningitis (except that caused by tuberculosis or sexually transmitted disease) Tuberculosis 64243 218021 7680 0.0272086 0.0018626
18739 Cancer of prostate Hyperplasia of prostate 111972 16096 7653 0.0597573 0.0018560
6829 Heart valve disorders Pulmonary heart disease 35137 57401 7560 0.0816962 0.0018335
20066 Cancer of ovary Ovarian cyst 38879 15248 7369 0.1361428 0.0017871
7301 Cardiac dysrhythmias Conduction disorders 148978 21704 7212 0.0422540 0.0017491
5580 Other nervous system disorders Mood disorders 127472 138517 7203 0.0270801 0.0017469
11023 Viral infection Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 224492 121004 7136 0.0206544 0.0017306
23368 Secondary malignancies Other skin disorders 325699 145255 7094 0.0150630 0.0017204
20935 Other complications of pregnancy Spontaneous abortion 208159 19545 6990 0.0306977 0.0016952
16541 Other skin disorders Other liver diseases 145255 281545 6875 0.0161082 0.0016673
20464 Other complications of pregnancy Female infertility 208159 48656 6856 0.0266963 0.0016627
4038 Leukemias Hodgkin`s disease 267725 41418 6660 0.0215434 0.0016152
5949 Other eye disorders Cataract 97876 59259 6579 0.0418685 0.0015955
4819 Mood disorders Disorders of lipid metabolism 138517 154188 6473 0.0221144 0.0015698
3081 Leukemias Cancer of breast 267725 299768 6456 0.0113764 0.0015657
6126 Cardiac dysrhythmias Acute myocardial infarction 148978 75566 6380 0.0284131 0.0015473
14217 Other gastrointestinal disorders Esophageal disorders 86745 30886 6320 0.0537273 0.0015327
306 Meningitis (except that caused by tuberculosis or sexually transmitted disease) Septicemia (except in labor) 64243 144834 6261 0.0299459 0.0015184
4165 Viral infection Leukemias 224492 267725 6207 0.0126103 0.0015053
16409 Septicemia (except in labor) Other liver diseases 144834 281545 6196 0.0145317 0.0015027
3960 Other nervous system disorders Cancer of brain and nervous system 127472 17423 6157 0.0424928 0.0014932
1364 Cancer of colon Cancer of stomach 88995 97846 6133 0.0328247 0.0014874
4168 Multiple myeloma Leukemias 39523 267725 6035 0.0196421 0.0014636
5347 Mood disorders Adjustment disorders 138517 76856 5970 0.0277194 0.0014478
1249 Esophageal disorders Cancer of esophagus 30886 30389 5940 0.0969400 0.0014406
248 Viral infection Septicemia (except in labor) 224492 144834 5916 0.0160184 0.0014348
23380 Immunity disorders Other skin disorders 96804 145255 5777 0.0238661 0.0014010
1374 Cancer of breast Cancer of stomach 299768 97846 5722 0.0143908 0.0013877
455 HIV infection Mycoses 120631 106711 5718 0.0251515 0.0013867
26588 Other fractures Fracture of neck of femur (hip) 186529 6386 5556 0.0288002 0.0013474
237 Lymphadenitis Tuberculosis 13791 218021 5551 0.0239461 0.0013462
11111 Influenza Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 82385 121004 5543 0.0272532 0.0013443
5388 Substance-related disorders Anxiety disorders 89475 84284 5518 0.0317566 0.0013382
245 Mycoses Septicemia (except in labor) 106711 144834 5510 0.0219046 0.0013363
6845 Other circulatory disease Pulmonary heart disease 68286 57401 5470 0.0435208 0.0013266
23420 Other nervous system disorders Other skin disorders 127472 145255 5439 0.0199430 0.0013191
13510 Septicemia (except in labor) Intestinal infection 144834 49613 5407 0.0278071 0.0013113
21497 Diabetes mellitus with complications Other complications of pregnancy 95877 208159 5269 0.0173302 0.0012778
20224 Cancer of breast Menopausal disorders 299768 18447 5266 0.0165486 0.0012771
21090 Other complications of pregnancy Induced abortion 208159 28314 5235 0.0221378 0.0012696
4645 Disorders of lipid metabolism Diabetes mellitus with complications 154188 95877 5230 0.0209146 0.0012684
7662 Syncope Cardiac dysrhythmias 16671 148978 5168 0.0311985 0.0012533
21556 Normal pregnancy and/or delivery Other complications of pregnancy 12864 208159 5117 0.0231514 0.0012410
2151 Secondary malignancies Cancer of pancreas 325699 39043 5081 0.0139304 0.0012322
3078 Cancer of thyroid Cancer of breast 61207 299768 5077 0.0140647 0.0012313
16455 Immunity disorders Other liver diseases 96804 281545 5022 0.0132735 0.0012179
11965 Other upper respiratory disease Other upper respiratory infections 9212 12419 5014 0.2317970 0.0012160
618 Sexually transmitted infections (not HIV or hepatitis) Viral infection 34644 224492 4978 0.0192100 0.0012073
19155 Other female genital disorders Other male genital disorders 14107 7911 4973 0.2258607 0.0012061
16505 Chronic kidney disease Other liver diseases 67359 281545 4931 0.0141328 0.0011959
7534 Cardiac arrest and ventricular fibrillation Cardiac dysrhythmias 6736 148978 4848 0.0311340 0.0011757
6311 Disorders of lipid metabolism Coronary atherosclerosis and other heart disease 154188 16305 4814 0.0282358 0.0011675
5588 Alcohol-related disorders Personality disorders 44257 103317 4807 0.0325735 0.0011658
121 Pneumonia (except that caused by tuberculosis or sexually transmitted disease) Tuberculosis 121004 218021 4795 0.0141435 0.0011629
16685 Other gastrointestinal disorders Pancreatic disorders (not diabetes) 86745 56562 4770 0.0332852 0.0011568
6259 Shock Acute myocardial infarction 193946 75566 4766 0.0176838 0.0011559
3981 Other endocrine disorders Cancer of thyroid 76089 61207 4748 0.0345822 0.0011515
5558 Substance-related disorders Mood disorders 89475 138517 4738 0.0207814 0.0011491
5515 Other nervous system disorders Developmental disorders 127472 63628 4701 0.0245997 0.0011401
16469 Mood disorders Other liver diseases 138517 281545 4700 0.0111888 0.0011398
17316 Abdominal pain Other gastrointestinal disorders 73039 86745 4649 0.0290955 0.0011275
4742 Other nervous system disorders Other endocrine disorders 127472 76089 4618 0.0226861 0.0011200
5798 Other nervous system disorders Encephalitis (except that caused by tuberculosis or sexually transmitted disease) 127472 56967 4606 0.0249730 0.0011171
17267 Other skin disorders Other gastrointestinal disorders 145255 86745 4597 0.0198147 0.0011149
1584 Cancer of prostate Cancer of colon 111972 88995 4567 0.0227251 0.0011076
3069 Cancer of ovary Cancer of breast 38879 299768 4500 0.0132882 0.0010913
9975 Disorders of lipid metabolism Other circulatory disease 154188 68286 4500 0.0202271 0.0010913
4845 Other nervous system disorders Disorders of lipid metabolism 127472 154188 4457 0.0158240 0.0010809
23416 Other eye disorders Other skin disorders 97876 145255 4449 0.0182988 0.0010790
5490 Personality disorders Developmental disorders 103317 63628 4438 0.0265836 0.0010763
943 Cancer of thyroid Cancer of head and neck 61207 79442 4350 0.0309281 0.0010550
4805 Immunity disorders Disorders of lipid metabolism 96804 154188 4340 0.0172914 0.0010525
10054 Other liver diseases Other circulatory disease 281545 68286 4339 0.0124031 0.0010523
16528 Other complications of pregnancy Other liver diseases 208159 281545 4272 0.0087236 0.0010360
7666 Shock Cardiac dysrhythmias 193946 148978 4240 0.0123643 0.0010283
21396 Other complications of pregnancy Ectopic pregnancy 208159 15016 4176 0.0187118 0.0010128
17853 Septicemia (except in labor) Urinary tract infections 144834 50967 4155 0.0212205 0.0010077
11021 HIV infection Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 120631 121004 4143 0.0171457 0.0010048
17225 Other nervous system disorders Other gastrointestinal disorders 127472 86745 4075 0.0190228 0.0009883
1367 Cancer of pancreas Cancer of stomach 39043 97846 4072 0.0297467 0.0009875
20932 Induced abortion Spontaneous abortion 28314 19545 4046 0.0845400 0.0009812
16588 Shock Other liver diseases 193946 281545 4020 0.0084544 0.0009749
21465 Hepatitis Other complications of pregnancy 204207 208159 4016 0.0097389 0.0009740
638 Other nervous system disorders Viral infection 127472 224492 3995 0.0113506 0.0009689
21461 Septicemia (except in labor) Other complications of pregnancy 144834 208159 3965 0.0112325 0.0009616
4103 Leukemias Non-Hodgkin`s lymphoma 267725 19130 3937 0.0137247 0.0009548
3090 Other endocrine disorders Cancer of breast 76089 299768 3933 0.0104641 0.0009538
1471 Other gastrointestinal disorders Cancer of stomach 86745 97846 3903 0.0211440 0.0009466
19652 Female infertility Endometriosis 48656 21524 3897 0.0555286 0.0009451
5698 Other nervous system disorders Substance-related disorders 127472 89475 3891 0.0179353 0.0009436
16495 Other nervous system disorders Other liver diseases 127472 281545 3881 0.0094886 0.0009412
16440 Leukemias Other liver diseases 267725 281545 3874 0.0070530 0.0009395
495 Meningitis (except that caused by tuberculosis or sexually transmitted disease) Mycoses 64243 106711 3866 0.0226143 0.0009376
17718 Disorders of lipid metabolism Chronic kidney disease 154188 67359 3865 0.0174455 0.0009373
11116 Asthma Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 149660 121004 3853 0.0142354 0.0009344
4162 Mycoses Leukemias 106711 267725 3834 0.0102394 0.0009298
5489 Mood disorders Developmental disorders 138517 63628 3830 0.0189468 0.0009289
16627 Secondary malignancies Pancreatic disorders (not diabetes) 325699 56562 3814 0.0099775 0.0009250
28678 Abdominal pain Nausea and vomiting 73039 32250 3793 0.0360247 0.0009199
1176 Secondary malignancies Cancer of esophagus 325699 30389 3755 0.0105451 0.0009107
16590 Abdominal pain Other liver diseases 73039 281545 3746 0.0105645 0.0009085
17173 Secondary malignancies Other gastrointestinal disorders 325699 86745 3736 0.0090582 0.0009061
350 Respiratory distress syndrome Septicemia (except in labor) 35066 144834 3717 0.0206615 0.0009014
3074 Cancer of bladder Cancer of breast 67224 299768 3717 0.0101283 0.0009014
3257 Secondary malignancies Cancer of cervix 325699 35740 3703 0.0102452 0.0008981
16425 Cancer of breast Other liver diseases 299768 281545 3703 0.0063701 0.0008981
5841 Other nervous system disorders Parkinson`s disease 127472 58740 3679 0.0197571 0.0008922
6001 Other nervous system disorders Other eye disorders 127472 97876 3679 0.0163259 0.0008922
16449 Other endocrine disorders Other liver diseases 76089 281545 3671 0.0102647 0.0008903
21550 Prolonged pregnancy Other complications of pregnancy 11626 208159 3667 0.0166845 0.0008893
23376 Disorders of lipid metabolism Other skin disorders 154188 145255 3665 0.0122394 0.0008888
12438 Other skin disorders Asthma 145255 149660 3663 0.0124205 0.0008884
27985 Shock Burns 193946 79311 3659 0.0133903 0.0008874
11088 Meningitis (except that caused by tuberculosis or sexually transmitted disease) Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 64243 121004 3601 0.0194389 0.0008733
931 Cancer of breast Cancer of head and neck 299768 79442 3595 0.0094802 0.0008719
6877 Other liver diseases Pulmonary heart disease 281545 57401 3577 0.0105533 0.0008675
23394 Mood disorders Other skin disorders 138517 145255 3558 0.0125382 0.0008629
7531 Heart valve disorders Cardiac dysrhythmias 35137 148978 3505 0.0190370 0.0008500
3334 Secondary malignancies Cancer of ovary 325699 38879 3500 0.0096001 0.0008488
529 Immunity disorders HIV infection 96804 120631 3498 0.0160876 0.0008483
4716 Mood disorders Other endocrine disorders 138517 76089 3490 0.0162624 0.0008464
12488 Allergic reactions Asthma 20593 149660 3486 0.0204754 0.0008454
25543 Developmental disorders Other congenital anomalies 63628 114619 3478 0.0195122 0.0008435
6834 Cardiac dysrhythmias Pulmonary heart disease 148978 57401 3475 0.0168380 0.0008428
13515 Viral infection Intestinal infection 224492 49613 3448 0.0125791 0.0008362
4996 Hepatitis Immunity disorders 204207 96804 3432 0.0114016 0.0008323
25457 Other congenital anomalies Nervous system congenital anomalies 114619 3429 3429 0.0290475 0.0008316
26694 Other fractures Spinal cord injury 186529 54947 3417 0.0141505 0.0008287
4041 Secondary malignancies Hodgkin`s disease 325699 41418 3400 0.0092614 0.0008246
4698 Disorders of lipid metabolism Other endocrine disorders 154188 76089 3386 0.0147040 0.0008212
247 Hepatitis Septicemia (except in labor) 204207 144834 3379 0.0096808 0.0008195
192 Other skin disorders Tuberculosis 145255 218021 3365 0.0092629 0.0008161
4357 Thyroid disorders Secondary malignancies 46553 325699 3312 0.0088972 0.0008032
23853 Other fractures Osteoarthritis 186529 60167 3251 0.0131782 0.0007884
24219 Pathological fracture Osteoporosis 25288 66779 3243 0.0352243 0.0007865
23350 Cancer of breast Other skin disorders 299768 145255 3235 0.0072693 0.0007846
1587 Cancer of bladder Cancer of colon 67224 88995 3233 0.0206953 0.0007841
11145 Urinary tract infections Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 50967 121004 3226 0.0187590 0.0007824
5775 Other nervous system disorders Meningitis (except that caused by tuberculosis or sexually transmitted disease) 127472 64243 3222 0.0168062 0.0007814
270 Leukemias Septicemia (except in labor) 267725 144834 3221 0.0078074 0.0007812
369 Burns Septicemia (except in labor) 79311 144834 3212 0.0143300 0.0007790
619 Meningitis (except that caused by tuberculosis or sexually transmitted disease) Viral infection 64243 224492 3212 0.0111244 0.0007790
16129 Other liver diseases Biliary tract disease 281545 7246 3209 0.0111118 0.0007782
3067 Cancer of uterus Cancer of breast 35011 299768 3204 0.0095705 0.0007770
11201 Respiratory distress syndrome Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 35066 121004 3203 0.0205228 0.0007768
16412 HIV infection Other liver diseases 120631 281545 3179 0.0079045 0.0007710
5013 Mood disorders Immunity disorders 138517 96804 3165 0.0134497 0.0007676
4359 Other endocrine disorders Secondary malignancies 76089 325699 3161 0.0078673 0.0007666
24610 Other congenital anomalies Other acquired deformities 114619 22527 3111 0.0226839 0.0007545
5351 Substance-related disorders Adjustment disorders 89475 76856 3096 0.0186135 0.0007508
3 Mycoses Tuberculosis 106711 218021 3073 0.0094632 0.0007453
26059 Shock Respiratory distress syndrome 193946 35066 3061 0.0133661 0.0007424
5557 Alcohol-related disorders Mood disorders 44257 138517 3037 0.0166161 0.0007365
1467 Other liver diseases Cancer of stomach 281545 97846 3036 0.0080023 0.0007363
23365 Leukemias Other skin disorders 267725 145255 3025 0.0073248 0.0007336
20387 Cancer of ovary Female infertility 38879 48656 3023 0.0345348 0.0007331
5387 Alcohol-related disorders Anxiety disorders 44257 84284 3016 0.0234633 0.0007314
17715 Diabetes mellitus with complications Chronic kidney disease 95877 67359 2988 0.0183048 0.0007247
16448 Diabetes mellitus with complications Other liver diseases 95877 281545 2965 0.0078559 0.0007191
23341 Mycoses Other skin disorders 106711 145255 2961 0.0117516 0.0007181
7297 Other nervous system disorders Conduction disorders 127472 21704 2951 0.0197820 0.0007157
27005 Other fractures Fracture of lower limb 186529 3667 2950 0.0155103 0.0007154
11227 Shock Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 193946 121004 2918 0.0092650 0.0007077
1663 Other liver diseases Cancer of colon 281545 88995 2900 0.0078264 0.0007033
5039 Other nervous system disorders Immunity disorders 127472 96804 2897 0.0129171 0.0007026
16500 Gastrointestinal hemorrhage Other liver diseases 42743 281545 2895 0.0089272 0.0007021
3160 Cancer of ovary Cancer of uterus 38879 35011 2888 0.0390851 0.0007004
3340 Other endocrine disorders Cancer of ovary 76089 38879 2886 0.0251026 0.0006999
23344 Viral infection Other skin disorders 224492 145255 2883 0.0077972 0.0006992
16472 Alcohol-related disorders Other liver diseases 44257 281545 2878 0.0088336 0.0006980
13616 Other liver diseases Intestinal infection 281545 49613 2859 0.0086333 0.0006934
246 HIV infection Septicemia (except in labor) 120631 144834 2857 0.0107622 0.0006929
547 Substance-related disorders HIV infection 89475 120631 2856 0.0135931 0.0006926
13620 Other gastrointestinal disorders Intestinal infection 86745 49613 2856 0.0209449 0.0006926
14213 Other liver diseases Esophageal disorders 281545 30886 2818 0.0090196 0.0006834
4813 Adjustment disorders Disorders of lipid metabolism 76856 154188 2786 0.0120583 0.0006757
148 Other liver diseases Tuberculosis 281545 218021 2758 0.0055208 0.0006689
5 Hepatitis Tuberculosis 204207 218021 2742 0.0064941 0.0006650
16287 Alcohol-related disorders Liver disease; alcohol-related 44257 2733 2733 0.0581613 0.0006628
16314 Other liver diseases Liver disease; alcohol-related 281545 2733 2733 0.0096138 0.0006628
17199 Mood disorders Other gastrointestinal disorders 138517 86745 2730 0.0121192 0.0006621
5895 Other nervous system disorders Paralysis 127472 94889 2719 0.0122279 0.0006594
55 Immunity disorders Tuberculosis 96804 218021 2714 0.0086207 0.0006582
4182 Immunity disorders Leukemias 96804 267725 2711 0.0074370 0.0006575
13197 Other upper respiratory disease Other lower respiratory disease 9212 17462 2708 0.1015221 0.0006567
6 Viral infection Tuberculosis 224492 218021 2696 0.0060925 0.0006538
3068 Cancer of cervix Cancer of breast 35740 299768 2696 0.0080356 0.0006538
16635 Disorders of lipid metabolism Pancreatic disorders (not diabetes) 154188 56562 2684 0.0127355 0.0006509
24145 Cancer of breast Osteoporosis 299768 66779 2673 0.0072924 0.0006483
6937 Other congenital anomalies Pulmonary heart disease 114619 57401 2657 0.0154459 0.0006444
15276 Abdominal pain Abdominal hernia 73039 14062 2628 0.0301719 0.0006373
21492 Secondary malignancies Other complications of pregnancy 325699 208159 2626 0.0049189 0.0006369
3175 Secondary malignancies Cancer of uterus 325699 35011 2601 0.0072108 0.0006308
20324 Osteoporosis Menopausal disorders 66779 18447 2601 0.0305189 0.0006308
5576 Other eye disorders Mood disorders 97876 138517 2575 0.0108929 0.0006245
25567 Other eye disorders Other congenital anomalies 97876 114619 2560 0.0120473 0.0006209
24476 Other acquired deformities Acquired foot deformities 22527 2544 2544 0.1014718 0.0006170
11137 Other liver diseases Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 281545 121004 2542 0.0063148 0.0006165
16418 Cancer of pancreas Other liver diseases 39043 281545 2535 0.0079073 0.0006148
27090 Paralysis Other fractures 94889 186529 2528 0.0089831 0.0006131
1572 Cancer of pancreas Cancer of colon 39043 88995 2508 0.0195879 0.0006082
13708 Abdominal pain Intestinal infection 73039 49613 2497 0.0203584 0.0006056
11871 Viral infection Other upper respiratory infections 224492 12419 2491 0.0105145 0.0006041
27051 Secondary malignancies Other fractures 325699 186529 2487 0.0048553 0.0006031
1594 Leukemias Cancer of colon 267725 88995 2484 0.0069634 0.0006024
21522 Substance-related disorders Other complications of pregnancy 89475 208159 2476 0.0083189 0.0006005
5611 Other nervous system disorders Personality disorders 127472 103317 2466 0.0106851 0.0005981
21583 Birth trauma Other complications of pregnancy 11058 208159 2457 0.0112081 0.0005959
17943 Calculus of urinary tract Urinary tract infections 5393 50967 2454 0.0435415 0.0005951
23434 Other connective tissue disease Other skin disorders 17076 145255 2450 0.0150926 0.0005942
28704 Secondary malignancies Abdominal pain 325699 73039 2448 0.0061394 0.0005937
16632 Diabetes mellitus with complications Pancreatic disorders (not diabetes) 95877 56562 2432 0.0159539 0.0005898
1667 Other gastrointestinal disorders Cancer of colon 86745 88995 2421 0.0137760 0.0005871
5552 Viral infection Mood disorders 224492 138517 2403 0.0066197 0.0005828
21609 Abdominal pain Other complications of pregnancy 73039 208159 2396 0.0085207 0.0005811
5587 Schizophrenia and other psychotic disorders Personality disorders 15858 103317 2392 0.0200713 0.0005801
3908 Secondary malignancies Cancer of brain and nervous system 325699 17423 2389 0.0069625 0.0005794
1455 Esophageal disorders Cancer of stomach 30886 97846 2348 0.0182394 0.0005694
5511 Other eye disorders Developmental disorders 97876 63628 2346 0.0145260 0.0005690
4222 Other nervous system disorders Leukemias 127472 267725 2345 0.0059337 0.0005687
5670 Other nervous system disorders Alcohol-related disorders 127472 44257 2342 0.0136378 0.0005680
2133 Cancer of breast Cancer of pancreas 299768 39043 2341 0.0069095 0.0005677
11052 Leukemias Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 267725 121004 2326 0.0059836 0.0005641
11120 Other lower respiratory disease Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 17462 121004 2326 0.0167983 0.0005641
285 Immunity disorders Septicemia (except in labor) 96804 144834 2311 0.0095639 0.0005605
24728 Other connective tissue disease Systemic lupus erythematosus and connective tissue disorders 17076 2479 2306 0.1179238 0.0005593
17730 Adjustment disorders Chronic kidney disease 76856 67359 2300 0.0159484 0.0005578
3110 Mood disorders Cancer of breast 138517 299768 2299 0.0052454 0.0005576
5382 Developmental disorders Anxiety disorders 63628 84284 2275 0.0153808 0.0005517
5564 Parkinson`s disease Mood disorders 58740 138517 2274 0.0115281 0.0005515
17964 Other complications of pregnancy Urinary tract infections 208159 50967 2250 0.0086830 0.0005457
10144 Shock Other circulatory disease 193946 68286 2246 0.0085649 0.0005447
5024 Multiple sclerosis Immunity disorders 64331 96804 2242 0.0139138 0.0005437
4232 Secondary malignancies Multiple myeloma 325699 39523 2238 0.0061278 0.0005428
17680 Hepatitis Chronic kidney disease 204207 67359 2236 0.0082337 0.0005423
21607 Shock Other complications of pregnancy 193946 208159 2236 0.0055607 0.0005423
16447 Thyroid disorders Other liver diseases 46553 281545 2233 0.0068059 0.0005415
11281 Immunity disorders Influenza 96804 82385 2218 0.0123780 0.0005379
17181 Disorders of lipid metabolism Other gastrointestinal disorders 154188 86745 2216 0.0091976 0.0005374
1148 Cancer of colon Cancer of esophagus 88995 30389 2208 0.0184949 0.0005355
16411 Mycoses Other liver diseases 106711 281545 2202 0.0056715 0.0005340
281 Disorders of lipid metabolism Septicemia (except in labor) 154188 144834 2192 0.0073306 0.0005316
3177 Benign neoplasm of uterus Cancer of uterus 2194 35011 2183 0.0586749 0.0005294
28547 Disorders of lipid metabolism Shock 154188 193946 2167 0.0062246 0.0005255
6856 Asthma Pulmonary heart disease 149660 57401 2165 0.0104559 0.0005251
4405 Other nervous system disorders Secondary malignancies 127472 325699 2163 0.0047730 0.0005246
16417 Cancer of liver and intrahepatic bile duct Other liver diseases 5618 281545 2149 0.0074836 0.0005212
26687 Other nervous system disorders Spinal cord injury 127472 54947 2141 0.0117367 0.0005192
12378 Other lower respiratory disease Asthma 17462 149660 2137 0.0127871 0.0005183
10097 Other skin disorders Other circulatory disease 145255 68286 2135 0.0099981 0.0005178
4841 Other eye disorders Disorders of lipid metabolism 97876 154188 2131 0.0084542 0.0005168
10019 Other nervous system disorders Other circulatory disease 127472 68286 2130 0.0108808 0.0005166
6137 Other circulatory disease Acute myocardial infarction 68286 75566 2126 0.0147791 0.0005156
5911 Other nervous system disorders Epilepsy; convulsions 127472 74226 2115 0.0104860 0.0005129
5345 Developmental disorders Adjustment disorders 63628 76856 2111 0.0150266 0.0005120
4702 Immunity disorders Other endocrine disorders 96804 76089 2097 0.0121289 0.0005086
3558 Secondary malignancies Cancer of testis 325699 16094 2094 0.0061265 0.0005078
14146 Secondary malignancies Esophageal disorders 325699 30886 2093 0.0058696 0.0005076
5783 Multiple sclerosis Encephalitis (except that caused by tuberculosis or sexually transmitted disease) 64331 56967 2091 0.0172385 0.0005071
21477 Cancer of ovary Other complications of pregnancy 38879 208159 2089 0.0084562 0.0005066
28622 Secondary malignancies Nausea and vomiting 325699 32250 2075 0.0057969 0.0005032
1087 Other skin disorders Cancer of head and neck 145255 79442 2072 0.0092213 0.0005025
23374 Other endocrine disorders Other skin disorders 76089 145255 2067 0.0093384 0.0005013
17185 Immunity disorders Other gastrointestinal disorders 96804 86745 2065 0.0112504 0.0005008
21474 Cancer of breast Other complications of pregnancy 299768 208159 2062 0.0040596 0.0005001
329 Other skin disorders Septicemia (except in labor) 145255 144834 2059 0.0070978 0.0004994
16773 Abdominal pain Pancreatic disorders (not diabetes) 73039 56562 2058 0.0158795 0.0004991
575 Sexually transmitted infections (not HIV or hepatitis) Hepatitis 34644 204207 2051 0.0085869 0.0004974
4643 Other endocrine disorders Diabetes mellitus with complications 76089 95877 2051 0.0119268 0.0004974
457 Viral infection Mycoses 224492 106711 2049 0.0061865 0.0004969
20460 Spontaneous abortion Female infertility 19545 48656 2036 0.0298529 0.0004938
3482 Leukemias Cancer of prostate 267725 111972 2029 0.0053437 0.0004921
5828 Paralysis Parkinson`s disease 94889 58740 2025 0.0131811 0.0004911
11113 Acute bronchitis Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 6384 121004 2022 0.0158728 0.0004904
28519 Viral infection Shock 224492 193946 2019 0.0048251 0.0004896
8234 Other circulatory disease Acute cerebrovascular disease 68286 6957 2016 0.0267932 0.0004889
1382 Cancer of bladder Cancer of stomach 67224 97846 2012 0.0121888 0.0004880
12289 Viral infection Asthma 224492 149660 2011 0.0053748 0.0004877
5350 Alcohol-related disorders Adjustment disorders 44257 76856 2006 0.0165630 0.0004865
12333 Immunity disorders Asthma 96804 149660 2003 0.0081269 0.0004858
21581 Respiratory distress syndrome Other complications of pregnancy 35066 208159 1993 0.0081941 0.0004833
21498 Other endocrine disorders Other complications of pregnancy 76089 208159 1992 0.0070080 0.0004831
1469 Gastrointestinal hemorrhage Cancer of stomach 42743 97846 1986 0.0141263 0.0004816
4379 Mood disorders Secondary malignancies 138517 325699 1981 0.0042674 0.0004804
16438 Hodgkin`s disease Other liver diseases 41418 281545 1978 0.0061245 0.0004797
591 Substance-related disorders Hepatitis 89475 204207 1966 0.0066943 0.0004768
19925 Other endocrine disorders Menstrual disorders 76089 12598 1960 0.0221002 0.0004753
23288 Other skin disorders Chronic ulcer of skin 145255 3216 1959 0.0131945 0.0004751
17736 Mood disorders Chronic kidney disease 138517 67359 1950 0.0094717 0.0004729
21518 Mood disorders Other complications of pregnancy 138517 208159 1949 0.0056220 0.0004727
17179 Other endocrine disorders Other gastrointestinal disorders 76089 86745 1946 0.0119508 0.0004719
11067 Immunity disorders Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 96804 121004 1944 0.0089253 0.0004715
4714 Developmental disorders Other endocrine disorders 63628 76089 1940 0.0138852 0.0004705
3239 Viral infection Cancer of cervix 224492 35740 1936 0.0074395 0.0004695
12332 Cystic fibrosis Asthma 41834 149660 1921 0.0100316 0.0004659
13513 HIV infection Intestinal infection 120631 49613 1921 0.0112838 0.0004659
13110 Viral infection Other lower respiratory disease 224492 17462 1919 0.0079313 0.0004654
569 Other nervous system disorders HIV infection 127472 120631 1914 0.0077145 0.0004642
23463 Burns Other skin disorders 79311 145255 1914 0.0085231 0.0004642
20250 Disorders of lipid metabolism Menopausal disorders 154188 18447 1905 0.0110348 0.0004620
4798 Hepatitis Disorders of lipid metabolism 204207 154188 1898 0.0052958 0.0004603
16638 Cystic fibrosis Pancreatic disorders (not diabetes) 41834 56562 1891 0.0192183 0.0004586
6850 Pneumonia (except that caused by tuberculosis or sexually transmitted disease) Pulmonary heart disease 121004 57401 1881 0.0105434 0.0004562
11236 Hepatitis Influenza 204207 82385 1863 0.0065005 0.0004518
20536 Sexually transmitted infections (not HIV or hepatitis) Other female genital disorders 34644 14107 1857 0.0380915 0.0004504
20248 Other endocrine disorders Menopausal disorders 76089 18447 1855 0.0196222 0.0004499
25572 Heart valve disorders Other congenital anomalies 35137 114619 1852 0.0123668 0.0004491
21506 Deficiency and other anemia Other complications of pregnancy 29917 208159 1836 0.0077118 0.0004453
2291 Cancer of breast Melanomas of skin 299768 37939 1831 0.0054219 0.0004441
4631 Other eye disorders Thyroid disorders 97876 46553 1830 0.0126706 0.0004438
27122 Shock Other fractures 193946 186529 1828 0.0048045 0.0004433
7530 Other nervous system disorders Cardiac dysrhythmias 127472 148978 1824 0.0065979 0.0004424
1379 Cancer of prostate Cancer of stomach 111972 97846 1823 0.0086885 0.0004421
9993 Mood disorders Other circulatory disease 138517 68286 1823 0.0088152 0.0004421
13706 Shock Intestinal infection 193946 49613 1818 0.0074643 0.0004409
5891 Other eye disorders Paralysis 97876 94889 1809 0.0093845 0.0004387
14215 Gastrointestinal hemorrhage Esophageal disorders 42743 30886 1809 0.0245691 0.0004387
1389 Leukemias Cancer of stomach 267725 97846 1805 0.0049375 0.0004378
10020 Heart valve disorders Other circulatory disease 35137 68286 1795 0.0173559 0.0004353
23342 HIV infection Other skin disorders 120631 145255 1788 0.0067247 0.0004336
4164 Hepatitis Leukemias 204207 267725 1775 0.0037611 0.0004305
21475 Cancer of uterus Other complications of pregnancy 35011 208159 1757 0.0072254 0.0004261
20138 Female infertility Ovarian cyst 48656 15248 1754 0.0274474 0.0004254
12347 Mood disorders Asthma 138517 149660 1751 0.0060761 0.0004247
17139 Septicemia (except in labor) Other gastrointestinal disorders 144834 86745 1751 0.0075611 0.0004247
4350 Hepatitis Secondary malignancies 204207 325699 1740 0.0032836 0.0004220
28596 Abdominal pain Shock 73039 193946 1739 0.0065135 0.0004217
23363 Hodgkin`s disease Other skin disorders 41418 145255 1738 0.0093104 0.0004215
7544 Other circulatory disease Cardiac dysrhythmias 68286 148978 1736 0.0079903 0.0004210
5556 Schizophrenia and other psychotic disorders Mood disorders 15858 138517 1730 0.0112065 0.0004196
20145 Other complications of pregnancy Ovarian cyst 208159 15248 1728 0.0077348 0.0004191
16955 Abdominal pain Gastrointestinal hemorrhage 73039 42743 1724 0.0148901 0.0004181
551 Encephalitis (except that caused by tuberculosis or sexually transmitted disease) HIV infection 56967 120631 1717 0.0096679 0.0004164
21468 Sexually transmitted infections (not HIV or hepatitis) Other complications of pregnancy 34644 208159 1715 0.0070633 0.0004159
21516 Developmental disorders Other complications of pregnancy 63628 208159 1715 0.0063101 0.0004159
24292 Secondary malignancies Pathological fracture 325699 25288 1692 0.0048207 0.0004103
550 Meningitis (except that caused by tuberculosis or sexually transmitted disease) HIV infection 64243 120631 1681 0.0090927 0.0004077
7606 Other complications of pregnancy Cardiac dysrhythmias 208159 148978 1677 0.0046957 0.0004067
27108 Intracranial injury Other fractures 18732 186529 1673 0.0081506 0.0004057
1582 Cancer of ovary Cancer of colon 38879 88995 1670 0.0130597 0.0004050
4822 Alcohol-related disorders Disorders of lipid metabolism 44257 154188 1666 0.0083953 0.0004040
3079 Hodgkin`s disease Cancer of breast 41418 299768 1663 0.0048742 0.0004033
6073 Disorders of lipid metabolism Acute myocardial infarction 154188 75566 1661 0.0072295 0.0004028
3247 Cancer of bladder Cancer of cervix 67224 35740 1656 0.0160833 0.0004016
6123 Pulmonary heart disease Acute myocardial infarction 57401 75566 1653 0.0124317 0.0004009
6784 Disorders of lipid metabolism Pulmonary heart disease 154188 57401 1653 0.0078123 0.0004009
179 Other complications of pregnancy Tuberculosis 208159 218021 1651 0.0038739 0.0004004
4106 Secondary malignancies Non-Hodgkin`s lymphoma 325699 19130 1639 0.0047531 0.0003975
4408 Hypertension with complications and secondary hypertension Secondary malignancies 8747 325699 1633 0.0048827 0.0003960
20463 Ectopic pregnancy Female infertility 15016 48656 1632 0.0256314 0.0003958
11167 Other complications of pregnancy Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 208159 121004 1629 0.0049489 0.0003951
474 Immunity disorders Mycoses 96804 106711 1620 0.0079601 0.0003929
925 Melanomas of skin Cancer of head and neck 37939 79442 1618 0.0137842 0.0003924
3082 Multiple myeloma Cancer of breast 39523 299768 1618 0.0047688 0.0003924
27033 Cancer of breast Other fractures 299768 186529 1616 0.0033231 0.0003919
21544 Other nervous system disorders Other complications of pregnancy 127472 208159 1612 0.0048029 0.0003909
20622 Other complications of pregnancy Other female genital disorders 208159 14107 1610 0.0072436 0.0003905
23440 Other congenital anomalies Other skin disorders 114619 145255 1606 0.0061799 0.0003895
543 Mood disorders HIV infection 138517 120631 1604 0.0061895 0.0003890
19659 Other complications of pregnancy Endometriosis 208159 21524 1604 0.0069835 0.0003890
23372 Thyroid disorders Other skin disorders 46553 145255 1597 0.0083260 0.0003873
1468 Pancreatic disorders (not diabetes) Cancer of stomach 56562 97846 1596 0.0103363 0.0003871
17315 Nausea and vomiting Other gastrointestinal disorders 32250 86745 1593 0.0133871 0.0003863
5786 Epilepsy; convulsions Encephalitis (except that caused by tuberculosis or sexually transmitted disease) 74226 56967 1582 0.0120586 0.0003837
3148 Nausea and vomiting Cancer of breast 32250 299768 1577 0.0047497 0.0003825
12329 Disorders of lipid metabolism Asthma 154188 149660 1573 0.0051769 0.0003815
4609 Mood disorders Thyroid disorders 138517 46553 1569 0.0084779 0.0003805
16130 Pancreatic disorders (not diabetes) Biliary tract disease 56562 7246 1568 0.0245737 0.0003803
7636 Other congenital anomalies Cardiac dysrhythmias 114619 148978 1567 0.0059447 0.0003800
590 Alcohol-related disorders Hepatitis 44257 204207 1565 0.0062987 0.0003795
19650 Ovarian cyst Endometriosis 15248 21524 1560 0.0424236 0.0003783
26635 Secondary malignancies Spinal cord injury 325699 54947 1559 0.0040957 0.0003781
587 Mood disorders Hepatitis 138517 204207 1553 0.0045313 0.0003766
3104 Adjustment disorders Cancer of breast 76856 299768 1550 0.0041155 0.0003759
28536 Leukemias Shock 267725 193946 1547 0.0033509 0.0003752
127 Asthma Tuberculosis 149660 218021 1546 0.0042047 0.0003749
13558 Immunity disorders Intestinal infection 96804 49613 1535 0.0104838 0.0003723
11114 Other upper respiratory infections Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 12419 121004 1529 0.0114598 0.0003708
28551 Immunity disorders Shock 96804 193946 1529 0.0052588 0.0003708
21496 Thyroid disorders Other complications of pregnancy 46553 208159 1527 0.0059950 0.0003703
23828 Osteoporosis Osteoarthritis 66779 60167 1527 0.0120287 0.0003703
3088 Thyroid disorders Cancer of breast 46553 299768 1520 0.0043890 0.0003686
25453 Other nervous system disorders Nervous system congenital anomalies 127472 3429 1518 0.0115966 0.0003681
25571 Other nervous system disorders Other congenital anomalies 127472 114619 1518 0.0062704 0.0003681
17143 Hepatitis Other gastrointestinal disorders 204207 86745 1516 0.0052105 0.0003677
4392 Paralysis Secondary malignancies 94889 325699 1509 0.0035878 0.0003660
16558 Other congenital anomalies Other liver diseases 114619 281545 1508 0.0038065 0.0003657
13624 Urinary tract infections Intestinal infection 50967 49613 1502 0.0149334 0.0003643
26903 Other fractures Fracture of upper limb 186529 1860 1501 0.0079676 0.0003640
20408 Other endocrine disorders Female infertility 76089 48656 1499 0.0120165 0.0003635
23392 Developmental disorders Other skin disorders 63628 145255 1499 0.0071763 0.0003635
19976 Menopausal disorders Menstrual disorders 18447 12598 1498 0.0482525 0.0003633
11180 Other skin disorders Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 145255 121004 1496 0.0056186 0.0003628
4817 Developmental disorders Disorders of lipid metabolism 63628 154188 1495 0.0068636 0.0003626
21598 Complications of surgical procedures or medical care Other complications of pregnancy 22087 208159 1493 0.0064844 0.0003621
23343 Hepatitis Other skin disorders 204207 145255 1491 0.0042666 0.0003616
10061 Chronic kidney disease Other circulatory disease 67359 68286 1490 0.0109846 0.0003614
25100 Other congenital anomalies Cardiac and circulatory congenital anomalies 114619 1490 1490 0.0128328 0.0003614
20965 Other congenital anomalies Spontaneous abortion 114619 19545 1489 0.0110984 0.0003611
3693 Cancer of other urinary organs Cancer of bladder 3000 67224 1479 0.0210612 0.0003587
11022 Hepatitis Pneumonia (except that caused by tuberculosis or sexually transmitted disease) 204207 121004 1473 0.0045294 0.0003572
16467 Developmental disorders Other liver diseases 63628 281545 1473 0.0042674 0.0003572
17155 Cancer of breast Other gastrointestinal disorders 299768 86745 1472 0.0038084 0.0003570
16639 Immunity disorders Pancreatic disorders (not diabetes) 96804 56562 1465 0.0095523 0.0003553
1158 Cancer of breast Cancer of esophagus 299768 30389 1462 0.0044282 0.0003546
6070 Diabetes mellitus with complications Acute myocardial infarction 95877 75566 1459 0.0085101 0.0003538
3972 Leukemias Cancer of thyroid 267725 61207 1449 0.0044052 0.0003514
2138 Cancer of prostate Cancer of pancreas 111972 39043 1448 0.0095885 0.0003512
5035 Other eye disorders Immunity disorders 97876 96804 1437 0.0073813 0.0003485
24238 Fracture of neck of femur (hip) Osteoporosis 6386 66779 1435 0.0196132 0.0003480
19575 Cancer of uterus Endometriosis 35011 21524 1429 0.0252764 0.0003466
20534 Viral infection Other female genital disorders 224492 14107 1429 0.0059891 0.0003466
5785 Paralysis Encephalitis (except that caused by tuberculosis or sexually transmitted disease) 94889 56967 1424 0.0093773 0.0003453
4663 Mood disorders Diabetes mellitus with complications 138517 95877 1422 0.0060667 0.0003449
16609 Cancer of breast Pancreatic disorders (not diabetes) 299768 56562 1417 0.0039767 0.0003437
4711 Anxiety disorders Other endocrine disorders 84284 76089 1414 0.0088169 0.0003429
16491 Other eye disorders Other liver diseases 97876 281545 1414 0.0037267 0.0003429
20268 Mood disorders Menopausal disorders 138517 18447 1408 0.0089702 0.0003415
5373 Other nervous system disorders Adjustment disorders 127472 76856 1406 0.0068811 0.0003410
17801 Other skin disorders Chronic kidney disease 145255 67359 1403 0.0065988 0.0003403
2280 Abdominal pain Cancer of pancreas 73039 39043 1401 0.0124998 0.0003398
4685 Other eye disorders Diabetes mellitus with complications 97876 95877 1398 0.0072154 0.0003390
17144 Viral infection Other gastrointestinal disorders 224492 86745 1394 0.0044789 0.0003381
4053 Immunity disorders Hodgkin`s disease 96804 41418 1393 0.0100780 0.0003378
5456 Personality disorders Delirium, dementia, and amnestic and other cognitive disorders 103317 8506 1390 0.0124304 0.0003371
5762 Paralysis Meningitis (except that caused by tuberculosis or sexually transmitted disease) 94889 64243 1384 0.0086972 0.0003356
634 Other eye disorders Viral infection 97876 224492 1383 0.0042901 0.0003354
4196 Mood disorders Leukemias 138517 267725 1381 0.0033995 0.0003349
4657 Adjustment disorders Diabetes mellitus with complications 76856 95877 1374 0.0079545 0.0003332
4591 Disorders of lipid metabolism Thyroid disorders 154188 46553 1372 0.0068347 0.0003327
16454 Cystic fibrosis Other liver diseases 41834 281545 1372 0.0042427 0.0003327
378 Abdominal pain Septicemia (except in labor) 73039 144834 1368 0.0062789 0.0003318
5990 Other eye disorders Inflammation; infection of eye (except that caused by tuberculosis or sexually transmitteddisease) 97876 3963 1368 0.0134330 0.0003318
1755 Abdominal pain Cancer of colon 73039 88995 1363 0.0084118 0.0003306
43 Secondary malignancies Tuberculosis 325699 218021 1362 0.0025050 0.0003303
4401 Other eye disorders Secondary malignancies 97876 325699 1359 0.0032084 0.0003296
6967 Shock Pulmonary heart disease 193946 57401 1359 0.0054069 0.0003296
1386 Cancer of thyroid Cancer of stomach 61207 97846 1357 0.0085317 0.0003291
152 Other gastrointestinal disorders Tuberculosis 86745 218021 1356 0.0044493 0.0003289
936 Cancer of prostate Cancer of head and neck 111972 79442 1353 0.0070684 0.0003281
5565 Multiple sclerosis Mood disorders 64331 138517 1352 0.0066651 0.0003279