Here are the time series for the new “RAM” DB, there are now 85 stocks, some with multiple assessments.

Zig-Zags occur for Shaefer when r is high
There are 6 plots of jabba-fits
    Jabba with stock/bmsy as an index + final depletion provided as a prior
    Jabba with stock/bmsy as an index
    Jabba-COM with known final and initial depletion
    Jabba-COM with known final and  heuristic for initial depletion
    Jabba-COM with known initial and  heuristic for final depletion
    Jabba-COM with heuristic for final & initial depletion

If we can understand these plots I will do the ROC curves and we are finished :-)

JABBA defaults

sa=list(assessment  ="com",
        model.type  ="Pella",
        sigma.proc  =TRUE,
        igamma      = c(4,0.01),
        proc.dev.all=TRUE,
        sigma.est   =FALSE,
        fixed.obsE  =0.05)

Summary of Data

Figure 1 Time series of \(B:B_{MSY}\) for the RAM Legacy database.

Figure 2 Time series of \(F:F_{MSY}\) for the RAM Legacy database.

Figure 3 Time series of \(Catch:MSY\) for the RAM Legacy database.

Figure 4 Kobe phase plot.

Fits to perfect index

Figure 5 Time series of \(B:B_{MSY}\) for Jabba fit to perfect index and final depletion.

Figure 6 Time series of \(B:B_{MSY}\) for Jabba fit to perfect index alone.

Fits to catch only

Figure 7 Time series of \(B:B_{MSY}\) for Jabba-COM fit with actual initial and final depletion.

Figure 8 Time series of \(B:B_{MSY}\) for Jabba-COM fit with heuistic for initial and actual final depletion.

Figure 9 Time series of \(B:B_{MSY}\) for Jabba-COM fit with actual initial and heuristic for final depletion.

Figure 10 Time series of \(B:B_{MSY}\) for Jabba-COM fit with heuristics for initial and final depletion.

Figure 11 Plots of estimates verses RAM values of \(B/B_{MSY}\).

Figure 12 JABBA plots of estimates verses RAM values of \(B/B_{MSY}\).

Figure 13 ROC curves for JABBA-com, columns are Initial and rows Final depeletion derivation.

Figure 14 ROC curves for JABBA