Food Choices - Cancer
Katherine Ford & Carla Prado, Department of Agricultural, Food & Nutritional Science, University of Alberta, Edmonton, Alberta, Canada
26/01/2021
Abstract
Dietary intake perception of muscle loss among cancer survivors
Dietary intake is a modifiable risk factor for the development of various cancers including breast and colorectal. Loss of skeletal muscle is prevalent in cancer and indicative of lower diet quality whilst informed dietary choices promote optimal nutritional status, positively impacting survivorship. The objective was to characterize macronutrient distribution among breast and colorectal cancer survivors and determine if dietary intake was associated with self-perceived muscle loss. People diagnosed with breast or colorectal cancer within the past 18 months completed the online Diet History Questionnaire III as an optional component of a larger study. Macronutrient intake was compared to the respective AMDR. Participants were asked about symptoms listed in the PG-SGA Short Form and about self-perceived muscle loss. Descriptive analysis is presented as mean±SD or median[IQR] and robust ANOVA based on 20% trimmed means. Point-Biserial Correlation and robust t-tests were used. Thirty-two participants (age=61.4±11.1 years; 81.2% females) were included. Breast was the predominant tumor site (65.6%), more than half (56.3%) reported stage 1 disease, and most (90.6%) had undergone surgery. Nutrition impact symptoms were rarely (total symptom score: 0[4]) reported in the previous month. Mean fat, carbohydrate, and protein as a percent of total energy intake (% kcal) was 35.0±54.9, 47.1±6.1, and 16.4±3.1, respectively, suggesting a dietary intake pattern over the preceding month that was high in fat and low in protein. Self-perceived loss of muscle was reported by 40.6% of participants and did not differ by tumor type (p=0.733)or sex. Mean alcohol intake (% kcal; p=0.030), added sugar intake (p=0.019) and total SGA symptom score (p=0.006) varied significantly based on self-reported muscle loss. and was reported by 40.6% of participants. Mean protein intake (% kcal) differed significantly from the lower end of the AMDR (p<0.001 ), was not associated with self-reported loss of muscle (p=0.9535), and did not vary by tumor type (p=0.170) or sex (p=0.504). Macronutrient distribution among cancer survivors may be sub-optimal despite valuing the importance of professional nutrition advice. Statistical significance should be interpreted with caution due to the small sample size although clinical relevance should be noted.
This is an exploratory analysis based on a dataset with 32 observations and 336 variables. The aim is compare Muscle Loss perceptions: “Yes”, “No”, “Maybe”.
Dataset
# Load dataset
library(tidyverse)
food.base <- readr::read_csv("C:/Dropbox/Laboratorio/Carla Prado/food-choices-ffq-data.csv")
# cleaning names with default naming
food <- tibble::as_tibble(food.base, .name_repair = janitor::make_clean_names)Plots
Let’s do some plots. They are nice to visualize and explore our data.
Histograms
Here, there are some continuous variables, so histograms can show us their distributions. Some categories doesn’t have variance, and some items have outliers (that one which is far from the mean).
library(DataExplorer)
#plot_missing(food)
plot_histogram(food)
Bars
Barplots are very useful for categorical data. Most of them are not equally distributed, so we can see some lack of variance.
plot_bar(food)
ANOVA (p-values)
All items are coded with a ID number. Look for a ( * ) signal in the p-value. Two signals ( ** ) shows that non-parametric ANOVA found a significant difference among variables.
library(compareGroups)
categ <- compareGroups(muscle_loss ~ ., data = food, method = 2)
categ##
##
## -------- Summary of results by groups of 'muscle_loss'---------
##
##
## var
## 1 importance_nutr
## 2 cancer_type
## 3 age
## 4 sex
## 5 stage
## 6 wt_chg_6mo_amt_lbs
## 7 sga_appetite
## 8 sga_diarrhea
## 9 sga_taste
## 10 sga_nausea
## 11 sga_dry
## 12 sga_full
## 13 sga_vomit
## 14 sga_mouth
## 15 sga_tired
## 16 sga_constipation
## 17 sga_smell
## 18 sga_pain
## 19 sga_other
## 20 tx_chemo
## 21 tx_radiation
## 22 tx_surgery
## 23 tx_hormone
## 24 tx_other
## 25 tx_unsure
## 26 tx_surveillance
## 27 tx_none
## 28 marital
## 29 education
## 30 income
## 31 occupation
## 32 born_canada
## 33 ethnic
## 34 gram_weight_g
## 35 energy_kcal
## 36 gluten_g
## 37 alcohol_g
## 38 protein_g
## 39 nitrogen_g
## 40 total_protein_g
## 41 animal_protein_g
## 42 vegetable_protein_g
## 43 total_fat_g
## 44 solid_fat_g
## 45 total_saturated_fatty_acids_g
## 46 total_monounsaturated_fatty_acids_g
## 47 total_polyunsaturated_fatty_acids_g
## 48 total_saturated_fatty_acids_g_2
## 49 total_monounsaturated_fatty_acids_g_2
## 50 total_polyunsaturated_fatty_acids_g_2
## 51 polyunsaturated_to_saturated_fatty_acid_ratio
## 52 cholesterol_mg
## 53 cholesterol_to_saturated_fatty_acid_index
## 54 carbohydrate_g
## 55 total_sugars_g
## 56 total_sugars_g_2
## 57 added_sugars_g
## 58 added_sugars_by_total_sugars_g
## 59 available_carbohydrate_g
## 60 glycemic_index_glucose_reference
## 61 glycemic_index_bread_reference
## 62 glycemic_load_glucose_reference
## 63 glycemic_load_bread_reference
## 64 fructose_g
## 65 galactose_g
## 66 glucose_g
## 67 lactose_g
## 68 maltose_g
## 69 sucrose_g
## 70 starch_g
## 71 dietary_fiber_g
## 72 total_dietary_fiber_g
## 73 soluble_dietary_fiber_g
## 74 insoluble_dietary_fiber_g
## 75 pectins_g
## 76 retinol_mcg
## 77 total_vitamin_a_activity_international_units_iu
## 78 vitamin_a_retinol_activity_mcg
## 79 total_vitamin_a_activity_re_mcg
## 80 beta_carotene_mcg
## 81 beta_carotene_mcg_2
## 82 alpha_carotene_mcg
## 83 beta_cryptoxanthin_mcg
## 84 lutein_zeaxanthin_mcg
## 85 lycopene_mcg
## 86 vitamin_e_as_alpha_tocopherol_mg
## 87 vitamin_e_alpha_tocopherol_mg
## 88 added_alpha_tocopherol_mg
## 89 total_alpha_tocopherol_mg
## 90 beta_tocopherol_mg
## 91 gamma_tocopherol_mg
## 92 delta_tocopherol_mg
## 93 vitamin_e_international_units_iu
## 94 natural_alpha_tocopherol_rrr_alpha_tocopherol_or_d_alpha_tocopherol_mg
## 95 synthetic_alpha_tocopherol_all_rac_alpha_tocopherol_or_dl_alpha_tocopherol_mg
## 96 vitamin_k_mcg
## 97 vitamin_c_mg
## 98 thiamin_vitamin_b1_mg
## 99 riboflavin_vitamin_b2_mg
## 100 niacin_mg
## 101 niacin_mg_2
## 102 vitamin_b6_mg
## 103 total_folate_mcg
## 104 folate_dietary_folate_mcg
## 105 food_folate_mcg
## 106 folic_acid_mcg
## 107 vitamin_b12_mcg
## 108 added_vitamin_b12_mcg
## 109 pantothenic_acid_mg
## 110 vitamin_d_d2_d3_mcg
## 111 vitamin_d_calciferol_mcg
## 112 vitamin_d_ergocalciferol_mcg
## 113 vitamin_d_cholecalciferol_mcg
## 114 calcium_mg
## 115 phosphorus_mg
## 116 magnesium_mg
## 117 iron_mg
## 118 zinc_mg
## 119 copper_mg
## 120 selenium_mcg
## 121 sodium_mg
## 122 potassium_mg
## 123 manganese_mg
## 124 sfa_4_0_butanoic_g
## 125 sfa_6_0_hexanoic_g
## 126 sfa_8_0_octanoic_g
## 127 sfa_10_0_decanoic_g
## 128 sfa_12_0_dodecanoic_g
## 129 sfa_14_0_tetradecanoic_g
## 130 sfa_16_0_hexadecanoic_g
## 131 sfa_17_0_margaric_acid_g
## 132 sfa_18_0_octadecanoic_g
## 133 sfa_20_0_arachidic_acid_g
## 134 sfa_22_0_behenic_acid_g
## 135 mfa_16_1_hexadecenoic_g
## 136 mfa_18_1_octadecenoic_g
## 137 mfa_20_1_eicosenoic_g
## 138 mfa_22_1_docosenoic_g
## 139 mfa_14_1_myristoleic_g
## 140 pfa_18_2_octadecadienoic_g
## 141 pfa_18_3_octadecatrienoic_g
## 142 pfa_18_3_n3_alpha_linolenic_g
## 143 pfa_18_4_octadecatetraenoic_g
## 144 pfa_20_4_eicosatetraenoic_g
## 145 pfa_20_5_eicosapentaenoic_g
## 146 pfa_22_5_docosapentaenoic_g
## 147 pfa_22_6_docosahexaenoic_g
## 148 trans_18_1_trans_octadecenoic_acid_elaidic_acid_g
## 149 trans_18_2_trans_octadecadienoic_acid_linolelaidic_acid_incl_c_t_t_c_t_t_g
## 150 trans_16_1_trans_hexadecenoic_acid_g
## 151 total_trans_fatty_acitds_g
## 152 omega_3_fatty_acids_g
## 153 cla_18_2_linoleic_g
## 154 cla_cis9_trans11_g
## 155 cla_trans10_cis12_g
## 156 tryptophan_g
## 157 threonine_g
## 158 isoleucine_g
## 159 leucine_g
## 160 lysine_g
## 161 methionine_g
## 162 cystine_g
## 163 phenylalanine_g
## 164 tyrosine_g
## 165 valine_g
## 166 arginine_g
## 167 histidine_g
## 168 alanine_g
## 169 aspartic_acid_g
## 170 glutamin_acid_g
## 171 glycine_g
## 172 proline_g
## 173 serine_g
## 174 daidzein_mg
## 175 genistein_mg
## 176 glycitein_mg
## 177 coumestrol_mg
## 178 biochanin_a_mg
## 179 formononetin_mg
## 180 erythritol_g
## 181 inositol_g
## 182 isomalt_g
## 183 lactitol_g
## 184 maltitol_g
## 185 mannitol_g
## 186 pinitol_g
## 187 sorbitol_g
## 188 xylitol_g
## 189 caffeine_mg
## 190 theobromine_mg
## 191 moisture_g
## 192 water_g
## 193 total_choline_mg
## 194 aspartame_mg
## 195 saccharin_mg
## 196 phytic_acid_mg
## 197 oxalic_acid_mg
## 198 x3_methylhistidine_mg
## 199 sucrose_polyester_g
## 200 ash_g
## 201 acesulfame_potassium_mg
## 202 sucralose_mg
## 203 tagatose_g
## 204 betaine_mg
## 205 citrus_melon_berry_fruit_cups
## 206 other_fruit_cups
## 207 fruits_cups
## 208 juice_fruit_cups
## 209 total_fruit_cups
## 210 dark_green_vegetable_cups
## 211 red_orange_tomato_vegetable_cups
## 212 red_orange_other_vegetable_cups
## 213 total_red_orange_vegetable_cups
## 214 white_potato_starchy_vegetable_cups
## 215 other_starchy_vegetable_cups
## 216 total_starchy_vegetable_cups
## 217 other_vegetable_cups
## 218 total_vegetable_cups
## 219 legumes_vegetable_cups
## 220 whole_grain_oz
## 221 refined_grain_oz
## 222 total_number_of_grain_oz
## 223 meat_from_beef_pork_veal_lamb_and_game_protein_foods_oz
## 224 cured_meat_protein_foods_oz
## 225 meat_from_organ_meat_protein_foods_oz
## 226 poultry_protein_foods_oz
## 227 seafood_high_in_omega_3_protein_foods_oz
## 228 seafood_low_in_omega_3_protein_foods_oz
## 229 seafood_oz
## 230 total_meat_poultry_seafood_protein_foods_oz
## 231 eggs_protein_foods_oz
## 232 meat_poultry_and_eggs_oz
## 233 soy_products_protein_foods_oz
## 234 nuts_and_seeds_protein_foods_oz
## 235 legumes_protein_foods_oz
## 236 nuts_seeds_soy_and_legumes_oz
## 237 total_protein_foods_oz
## 238 milk_cups
## 239 yogurt_cups
## 240 cheese_cups
## 241 total_dairy_cups
## 242 oil_g
## 243 solid_fat_g_2
## 244 added_sugars_tsp
## 245 alcohol_drinks
## 246 energy_from_fat_percent_kcal
## 247 energy_from_carbohydrates_percent_kcal
## 248 energy_from_protein_percent_kcal
## 249 energy_from_alcohol_percent_kcal
## 250 energy_from_saturated_fatty_acids_percent_kcal
## 251 energy_from_monounsaturated_fatty_acids_percent_kcal
## 252 energy_from_polyunsaturated_fatty_acids_percent_kcal
## 253 supp_energy_kcal_dsid
## 254 supp_protein_g_dsid
## 255 supp_total_fat_g_dsid
## 256 supp_total_polyunsaturated_fatty_acids_g_dsid
## 257 supp_cholesterol_mg_dsid
## 258 supp_carbohydrate_g_dsid
## 259 supp_total_sugars_g_dsid
## 260 supp_dietary_fiber_g_dsid
## 261 supp_soluble_dietary_fiber_g_dsid
## 262 supp_total_vitamin_a_activity_iu_dsid
## 263 supp_vitamin_a_rae_mcg_dsid
## 264 supp_beta_carotene_percent_dsid
## 265 supp_lutein_zeaxanthin_mcg_dsid
## 266 supp_lycopene_mcg_dsid
## 267 supp_biotin_mcg_dsid
## 268 supp_vitamin_e_as_alpha_tocopherol_mg_dsid
## 269 supp_vitamin_e_iu_dsid
## 270 supp_vitamin_k_mcg_dsid
## 271 supp_vitamin_c_mg_dsid
## 272 supp_thiamin_vitamin_b1_mg_dsid
## 273 supp_riboflavin_vitamin_b2_mg_dsid
## 274 supp_niacin_mg_dsid
## 275 supp_vitamin_b6_mg_dsid
## 276 supp_folate_dfe_mcg_dsid
## 277 supp_folic_acid_mcg_dsid
## 278 supp_vitamin_b12_mcg_dsid
## 279 supp_pantothenic_acid_mg_dsid
## 280 supp_vitamin_d_d2_d3_mcg_dsid
## 281 supp_boron_mcg_dsid
## 282 supp_calcium_mg_dsid
## 283 supp_chloride_mg_dsid
## 284 supp_chromium_mcg_dsid
## 285 supp_copper_mg_dsid
## 286 supp_fluoride_mg_dsid
## 287 supp_iodine_mcg_dsid
## 288 supp_iron_mg_dsid
## 289 supp_magnesium_mg_dsid
## 290 supp_manganese_mg_dsid
## 291 supp_molybdenum_mcg_dsid
## 292 supp_nickel_mcg_dsid
## 293 supp_phosphorus_mg_dsid
## 294 supp_potassium_mg_dsid
## 295 supp_selenium_mcg_dsid
## 296 supp_silicon_mg_dsid
## 297 supp_sodium_mg_dsid
## 298 supp_tin_mcg_dsid
## 299 supp_vanadium_mcg_dsid
## 300 supp_zinc_mg_dsid
## 301 supp_pfa_20_5_eicosapentaenoic_acid_g_dsid
## 302 supp_pfa_22_6_docosahexaenoic_acid_g_dsid
## 303 supp_omega_3_fatty_acids_g_dsid
## 304 supp_inositol_g_dsid
## 305 supp_choline_mg_dsid
## 306 total_hei_2015_score
## 307 hei_2015_total_vegetables_component_score
## 308 hei_2015_greens_and_beans_component_score
## 309 hei_2015_total_fruits_component_score
## 310 hei_2015_whole_fruits_component_score
## 311 hei_2015_whole_grains_component_score
## 312 hei_2015_dairy_component_score
## 313 hei_2015_total_protein_foods_component_score
## 314 hei_2015_seafood_and_plant_proteins_component_score
## 315 hei_2015_fatty_acids_component_score
## 316 hei_2015_sodium_component_score
## 317 hei_2015_refined_grains_component_score
## 318 hei_2015_saturated_fats_component_score
## 319 hei_2015_added_sugars_component_score
## 320 hei_2015_density_of_total_vegetables_per_1000_kcal
## 321 hei_2015_density_of_greens_and_beans_per_1000_kcal
## 322 hei_2015_density_of_total_fruits_per_1000_kcal
## 323 hei_2015_density_of_whole_fruits_per_1000_kcal
## 324 hei_2015_density_of_whole_grains_per_1000_kcal
## 325 hei_2015_density_of_dairy_per_1000_kcal
## 326 hei_2015_density_of_total_protein_foods_per_1000_kcal
## 327 hei_2015_density_of_seafood_and_plant_proteins_per_1000_kcal
## 328 hei_2015_fatty_acid_ratio
## 329 hei_2015_density_of_sodium_per_1000_kcal
## 330 hei_2015_density_of_refined_grains_per_1000_kcal
## 331 hei_2015_percent_of_calories_from_saturated_fats
## 332 hei_2015_percent_of_calories_from_added_sugars
## 333 sga_symmpt_score
## N p.value method selection
## 1 32 0.050* continuous non-normal ALL
## 2 32 0.799 continuous non-normal ALL
## 3 32 0.956 continuous non-normal ALL
## 4 32 0.494 continuous non-normal ALL
## 5 28 0.966 continuous non-normal ALL
## 6 32 0.136 continuous non-normal ALL
## 7 32 0.050* continuous non-normal ALL
## 8 32 0.221 continuous non-normal ALL
## 9 32 0.348 continuous non-normal ALL
## 10 32 0.227 continuous non-normal ALL
## 11 32 0.482 continuous non-normal ALL
## 12 32 0.050* continuous non-normal ALL
## 13 32 0.221 continuous non-normal ALL
## 14 32 0.381 continuous non-normal ALL
## 15 32 0.031** continuous non-normal ALL
## 16 32 0.221 continuous non-normal ALL
## 17 32 0.096* continuous non-normal ALL
## 18 32 0.747 continuous non-normal ALL
## 19 32 0.457 continuous non-normal ALL
## 20 32 0.390 continuous non-normal ALL
## 21 32 0.081* continuous non-normal ALL
## 22 32 0.096* continuous non-normal ALL
## 23 32 0.390 continuous non-normal ALL
## 24 32 . continuous non-normal ALL
## 25 32 . continuous non-normal ALL
## 26 32 0.358 continuous non-normal ALL
## 27 32 . continuous non-normal ALL
## 28 32 0.220 continuous non-normal ALL
## 29 32 0.474 continuous non-normal ALL
## 30 22 0.289 continuous non-normal ALL
## 31 27 0.804 continuous non-normal ALL
## 32 32 0.861 continuous non-normal ALL
## 33 32 . continuous non-normal ALL
## 34 32 0.381 continuous non-normal ALL
## 35 32 0.690 continuous non-normal ALL
## 36 32 0.962 continuous non-normal ALL
## 37 32 0.024** continuous non-normal ALL
## 38 32 0.885 continuous non-normal ALL
## 39 32 0.886 continuous non-normal ALL
## 40 32 0.877 continuous non-normal ALL
## 41 32 0.638 continuous non-normal ALL
## 42 32 0.889 continuous non-normal ALL
## 43 32 0.789 continuous non-normal ALL
## 44 32 0.362 continuous non-normal ALL
## 45 32 0.495 continuous non-normal ALL
## 46 32 0.906 continuous non-normal ALL
## 47 32 0.803 continuous non-normal ALL
## 48 32 0.393 continuous non-normal ALL
## 49 32 0.927 continuous non-normal ALL
## 50 32 0.782 continuous non-normal ALL
## 51 32 0.248 continuous non-normal ALL
## 52 32 0.481 continuous non-normal ALL
## 53 32 0.497 continuous non-normal ALL
## 54 32 0.363 continuous non-normal ALL
## 55 32 0.078* continuous non-normal ALL
## 56 32 0.060* continuous non-normal ALL
## 57 32 0.019** continuous non-normal ALL
## 58 32 0.024** continuous non-normal ALL
## 59 32 0.297 continuous non-normal ALL
## 60 32 0.747 continuous non-normal ALL
## 61 32 0.747 continuous non-normal ALL
## 62 32 0.276 continuous non-normal ALL
## 63 32 0.276 continuous non-normal ALL
## 64 32 0.377 continuous non-normal ALL
## 65 32 0.477 continuous non-normal ALL
## 66 32 0.404 continuous non-normal ALL
## 67 32 0.204 continuous non-normal ALL
## 68 32 0.716 continuous non-normal ALL
## 69 32 0.030** continuous non-normal ALL
## 70 32 0.975 continuous non-normal ALL
## 71 32 0.290 continuous non-normal ALL
## 72 32 0.380 continuous non-normal ALL
## 73 32 0.829 continuous non-normal ALL
## 74 32 0.197 continuous non-normal ALL
## 75 32 0.349 continuous non-normal ALL
## 76 32 0.733 continuous non-normal ALL
## 77 32 0.729 continuous non-normal ALL
## 78 32 0.933 continuous non-normal ALL
## 79 32 0.776 continuous non-normal ALL
## 80 32 0.681 continuous non-normal ALL
## 81 32 0.617 continuous non-normal ALL
## 82 32 0.680 continuous non-normal ALL
## 83 32 0.265 continuous non-normal ALL
## 84 32 0.349 continuous non-normal ALL
## 85 32 0.783 continuous non-normal ALL
## 86 32 0.512 continuous non-normal ALL
## 87 32 0.492 continuous non-normal ALL
## 88 32 0.227 continuous non-normal ALL
## 89 32 0.526 continuous non-normal ALL
## 90 32 0.132 continuous non-normal ALL
## 91 32 0.653 continuous non-normal ALL
## 92 32 0.891 continuous non-normal ALL
## 93 32 0.444 continuous non-normal ALL
## 94 32 0.477 continuous non-normal ALL
## 95 32 0.880 continuous non-normal ALL
## 96 32 0.527 continuous non-normal ALL
## 97 32 0.252 continuous non-normal ALL
## 98 32 0.934 continuous non-normal ALL
## 99 32 0.799 continuous non-normal ALL
## 100 32 0.959 continuous non-normal ALL
## 101 32 0.957 continuous non-normal ALL
## 102 32 0.758 continuous non-normal ALL
## 103 32 0.660 continuous non-normal ALL
## 104 32 0.748 continuous non-normal ALL
## 105 32 0.776 continuous non-normal ALL
## 106 32 0.912 continuous non-normal ALL
## 107 32 0.816 continuous non-normal ALL
## 108 32 0.728 continuous non-normal ALL
## 109 32 0.870 continuous non-normal ALL
## 110 32 0.625 continuous non-normal ALL
## 111 32 0.569 continuous non-normal ALL
## 112 32 0.300 continuous non-normal ALL
## 113 32 0.584 continuous non-normal ALL
## 114 32 0.617 continuous non-normal ALL
## 115 32 0.820 continuous non-normal ALL
## 116 32 0.969 continuous non-normal ALL
## 117 32 0.986 continuous non-normal ALL
## 118 32 0.964 continuous non-normal ALL
## 119 32 0.519 continuous non-normal ALL
## 120 32 0.638 continuous non-normal ALL
## 121 32 0.942 continuous non-normal ALL
## 122 32 0.968 continuous non-normal ALL
## 123 32 0.301 continuous non-normal ALL
## 124 32 0.583 continuous non-normal ALL
## 125 32 0.461 continuous non-normal ALL
## 126 32 0.346 continuous non-normal ALL
## 127 32 0.387 continuous non-normal ALL
## 128 32 0.135 continuous non-normal ALL
## 129 32 0.564 continuous non-normal ALL
## 130 32 0.687 continuous non-normal ALL
## 131 32 0.274 continuous non-normal ALL
## 132 32 0.369 continuous non-normal ALL
## 133 32 0.791 continuous non-normal ALL
## 134 32 0.934 continuous non-normal ALL
## 135 32 0.754 continuous non-normal ALL
## 136 32 0.914 continuous non-normal ALL
## 137 32 0.824 continuous non-normal ALL
## 138 32 0.449 continuous non-normal ALL
## 139 32 0.325 continuous non-normal ALL
## 140 32 0.838 continuous non-normal ALL
## 141 32 0.783 continuous non-normal ALL
## 142 32 0.703 continuous non-normal ALL
## 143 32 0.643 continuous non-normal ALL
## 144 32 0.539 continuous non-normal ALL
## 145 32 0.965 continuous non-normal ALL
## 146 32 0.847 continuous non-normal ALL
## 147 32 0.968 continuous non-normal ALL
## 148 32 0.683 continuous non-normal ALL
## 149 32 0.528 continuous non-normal ALL
## 150 32 0.675 continuous non-normal ALL
## 151 32 0.617 continuous non-normal ALL
## 152 32 0.818 continuous non-normal ALL
## 153 32 0.651 continuous non-normal ALL
## 154 32 0.611 continuous non-normal ALL
## 155 32 0.693 continuous non-normal ALL
## 156 32 0.802 continuous non-normal ALL
## 157 32 0.851 continuous non-normal ALL
## 158 32 0.835 continuous non-normal ALL
## 159 32 0.813 continuous non-normal ALL
## 160 32 0.901 continuous non-normal ALL
## 161 32 0.868 continuous non-normal ALL
## 162 32 0.782 continuous non-normal ALL
## 163 32 0.904 continuous non-normal ALL
## 164 32 0.791 continuous non-normal ALL
## 165 32 0.835 continuous non-normal ALL
## 166 32 0.968 continuous non-normal ALL
## 167 32 0.922 continuous non-normal ALL
## 168 32 0.849 continuous non-normal ALL
## 169 32 0.954 continuous non-normal ALL
## 170 32 0.852 continuous non-normal ALL
## 171 32 0.789 continuous non-normal ALL
## 172 32 0.820 continuous non-normal ALL
## 173 32 0.888 continuous non-normal ALL
## 174 32 0.928 continuous non-normal ALL
## 175 32 0.991 continuous non-normal ALL
## 176 32 0.931 continuous non-normal ALL
## 177 32 0.343 continuous non-normal ALL
## 178 32 0.363 continuous non-normal ALL
## 179 32 0.351 continuous non-normal ALL
## 180 32 0.897 continuous non-normal ALL
## 181 32 0.118 continuous non-normal ALL
## 182 32 . continuous non-normal ALL
## 183 32 . continuous non-normal ALL
## 184 32 0.472 continuous non-normal ALL
## 185 32 0.183 continuous non-normal ALL
## 186 32 0.932 continuous non-normal ALL
## 187 32 0.162 continuous non-normal ALL
## 188 32 0.866 continuous non-normal ALL
## 189 32 0.900 continuous non-normal ALL
## 190 32 0.443 continuous non-normal ALL
## 191 32 0.344 continuous non-normal ALL
## 192 32 0.366 continuous non-normal ALL
## 193 32 0.671 continuous non-normal ALL
## 194 32 0.881 continuous non-normal ALL
## 195 32 0.847 continuous non-normal ALL
## 196 32 0.591 continuous non-normal ALL
## 197 32 0.521 continuous non-normal ALL
## 198 32 0.381 continuous non-normal ALL
## 199 32 0.808 continuous non-normal ALL
## 200 32 0.891 continuous non-normal ALL
## 201 32 0.469 continuous non-normal ALL
## 202 32 0.226 continuous non-normal ALL
## 203 32 0.333 continuous non-normal ALL
## 204 32 0.686 continuous non-normal ALL
## 205 32 0.302 continuous non-normal ALL
## 206 32 0.051* continuous non-normal ALL
## 207 32 0.101 continuous non-normal ALL
## 208 32 0.882 continuous non-normal ALL
## 209 32 0.109 continuous non-normal ALL
## 210 32 0.445 continuous non-normal ALL
## 211 32 0.333 continuous non-normal ALL
## 212 32 0.733 continuous non-normal ALL
## 213 32 0.466 continuous non-normal ALL
## 214 32 0.719 continuous non-normal ALL
## 215 32 0.443 continuous non-normal ALL
## 216 32 0.947 continuous non-normal ALL
## 217 32 0.541 continuous non-normal ALL
## 218 32 0.681 continuous non-normal ALL
## 219 32 0.519 continuous non-normal ALL
## 220 32 0.910 continuous non-normal ALL
## 221 32 0.932 continuous non-normal ALL
## 222 32 0.956 continuous non-normal ALL
## 223 32 0.533 continuous non-normal ALL
## 224 32 0.495 continuous non-normal ALL
## 225 32 0.579 continuous non-normal ALL
## 226 32 0.435 continuous non-normal ALL
## 227 32 0.886 continuous non-normal ALL
## 228 32 0.864 continuous non-normal ALL
## 229 32 0.934 continuous non-normal ALL
## 230 32 0.516 continuous non-normal ALL
## 231 32 0.252 continuous non-normal ALL
## 232 32 0.573 continuous non-normal ALL
## 233 32 0.850 continuous non-normal ALL
## 234 32 0.660 continuous non-normal ALL
## 235 32 0.510 continuous non-normal ALL
## 236 32 0.672 continuous non-normal ALL
## 237 32 0.735 continuous non-normal ALL
## 238 32 0.593 continuous non-normal ALL
## 239 32 0.063* continuous non-normal ALL
## 240 32 0.914 continuous non-normal ALL
## 241 32 0.244 continuous non-normal ALL
## 242 32 0.813 continuous non-normal ALL
## 243 32 0.413 continuous non-normal ALL
## 244 32 0.037** continuous non-normal ALL
## 245 32 0.027** continuous non-normal ALL
## 246 32 0.899 continuous non-normal ALL
## 247 32 0.051* continuous non-normal ALL
## 248 32 0.953 continuous non-normal ALL
## 249 32 0.030** continuous non-normal ALL
## 250 32 0.568 continuous non-normal ALL
## 251 32 0.340 continuous non-normal ALL
## 252 32 0.474 continuous non-normal ALL
## 253 32 0.042** continuous non-normal ALL
## 254 32 0.834 continuous non-normal ALL
## 255 32 0.178 continuous non-normal ALL
## 256 32 0.168 continuous non-normal ALL
## 257 32 0.104 continuous non-normal ALL
## 258 32 0.315 continuous non-normal ALL
## 259 32 0.567 continuous non-normal ALL
## 260 32 0.834 continuous non-normal ALL
## 261 32 0.834 continuous non-normal ALL
## 262 32 0.438 continuous non-normal ALL
## 263 32 0.438 continuous non-normal ALL
## 264 32 0.818 continuous non-normal ALL
## 265 32 0.171 continuous non-normal ALL
## 266 32 0.859 continuous non-normal ALL
## 267 32 0.376 continuous non-normal ALL
## 268 32 0.253 continuous non-normal ALL
## 269 32 0.253 continuous non-normal ALL
## 270 32 0.818 continuous non-normal ALL
## 271 32 0.974 continuous non-normal ALL
## 272 32 0.195 continuous non-normal ALL
## 273 32 0.195 continuous non-normal ALL
## 274 32 0.297 continuous non-normal ALL
## 275 32 0.313 continuous non-normal ALL
## 276 32 0.209 continuous non-normal ALL
## 277 32 0.209 continuous non-normal ALL
## 278 32 0.771 continuous non-normal ALL
## 279 32 0.327 continuous non-normal ALL
## 280 32 0.416 continuous non-normal ALL
## 281 32 0.425 continuous non-normal ALL
## 282 32 0.253 continuous non-normal ALL
## 283 32 0.778 continuous non-normal ALL
## 284 32 0.231 continuous non-normal ALL
## 285 32 0.608 continuous non-normal ALL
## 286 32 . continuous non-normal ALL
## 287 32 0.778 continuous non-normal ALL
## 288 32 0.842 continuous non-normal ALL
## 289 32 0.197 continuous non-normal ALL
## 290 32 0.778 continuous non-normal ALL
## 291 32 0.522 continuous non-normal ALL
## 292 32 0.778 continuous non-normal ALL
## 293 32 0.778 continuous non-normal ALL
## 294 32 0.601 continuous non-normal ALL
## 295 32 0.778 continuous non-normal ALL
## 296 32 0.778 continuous non-normal ALL
## 297 32 0.381 continuous non-normal ALL
## 298 32 0.446 continuous non-normal ALL
## 299 32 0.778 continuous non-normal ALL
## 300 32 0.866 continuous non-normal ALL
## 301 32 0.185 continuous non-normal ALL
## 302 32 0.185 continuous non-normal ALL
## 303 32 0.168 continuous non-normal ALL
## 304 32 . continuous non-normal ALL
## 305 32 0.025** continuous non-normal ALL
## 306 32 0.371 continuous non-normal ALL
## 307 32 0.300 continuous non-normal ALL
## 308 32 0.156 continuous non-normal ALL
## 309 32 0.123 continuous non-normal ALL
## 310 32 0.024** continuous non-normal ALL
## 311 32 0.644 continuous non-normal ALL
## 312 32 0.166 continuous non-normal ALL
## 313 32 0.034** continuous non-normal ALL
## 314 32 0.720 continuous non-normal ALL
## 315 32 0.369 continuous non-normal ALL
## 316 32 0.096* continuous non-normal ALL
## 317 32 0.621 continuous non-normal ALL
## 318 32 0.547 continuous non-normal ALL
## 319 32 0.019** continuous non-normal ALL
## 320 32 0.387 continuous non-normal ALL
## 321 32 0.209 continuous non-normal ALL
## 322 32 0.044** continuous non-normal ALL
## 323 32 0.046** continuous non-normal ALL
## 324 32 0.651 continuous non-normal ALL
## 325 32 0.215 continuous non-normal ALL
## 326 32 0.292 continuous non-normal ALL
## 327 32 0.406 continuous non-normal ALL
## 328 32 0.382 continuous non-normal ALL
## 329 32 0.098* continuous non-normal ALL
## 330 32 0.993 continuous non-normal ALL
## 331 32 0.568 continuous non-normal ALL
## 332 32 0.014** continuous non-normal ALL
## 333 32 0.006** continuous non-normal ALL
## -----
## Signif. codes: 0 '**' 0.05 '*' 0.1 ' ' 1restab <- createTable(categ, show.ratio = TRUE, hide.no = 'no')
update(restab, x = update(categ, ~ . ))##
## --------Summary descriptives table ---------
##
## __________________________________________________________________________________________________
## [ALL] N
## N=32
## ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯
## importance_nutr 2.00 [1.75;3.00] 32
## cancer_type 2.00 [1.00;2.00] 32
## age 62.0 [52.5;69.5] 32
## sex 1.00 [1.00;1.00] 32
## stage 1.00 [1.00;2.00] 28
## wt_chg_6mo_amt_lbs 0.00 [-5.00;5.00] 32
## muscle_loss:
## maybe 7 (21.9%) 32
## no 12 (37.5%)
## yes 13 (40.6%)
## sga_appetite 2.00 [2.00;2.00] 32
## sga_diarrhea 2.00 [2.00;2.00] 32
## sga_taste 2.00 [2.00;2.00] 32
## sga_nausea 2.00 [2.00;2.00] 32
## sga_dry 2.00 [2.00;2.00] 32
## sga_full 2.00 [2.00;2.00] 32
## sga_vomit 2.00 [2.00;2.00] 32
## sga_mouth 2.00 [2.00;2.00] 32
## sga_tired 2.00 [1.75;2.00] 32
## sga_constipation 2.00 [2.00;2.00] 32
## sga_smell 2.00 [2.00;2.00] 32
## sga_pain 2.00 [2.00;2.00] 32
## sga_other 2.00 [2.00;2.00] 32
## tx_chemo 2.00 [1.00;2.00] 32
## tx_radiation 1.00 [1.00;2.00] 32
## tx_surgery 1.00 [1.00;1.00] 32
## tx_hormone 2.00 [1.00;2.00] 32
## tx_other 2.00 [2.00;2.00] 32
## tx_unsure 2.00 [2.00;2.00] 32
## tx_surveillance 2.00 [2.00;2.00] 32
## tx_none 2.00 [2.00;2.00] 32
## marital 3.00 [3.00;4.00] 32
## education 3.50 [3.00;4.25] 32
## income 1.00 [1.00;3.00] 22
## occupation 1.00 [0.00;2.00] 27
## born_canada 1.00 [1.00;1.00] 32
## ethnic 1.00 [1.00;1.00] 32
## gram_weight_g 3360 [2795;4347] 32
## energy_kcal 1536 [1243;1829] 32
## gluten_g 4.45 [2.83;6.36] 32
## alcohol_g 2.76 [0.01;11.3] 32
## protein_g 62.2 [46.9;85.4] 32
## nitrogen_g 9.93 [7.46;13.7] 32
## total_protein_g 61.2 [46.4;84.4] 32
## animal_protein_g 39.7 [28.0;53.5] 32
## vegetable_protein_g 20.8 [16.3;29.5] 32
## total_fat_g 61.3 [46.9;75.2] 32
## solid_fat_g 30.6 [22.4;38.4] 32
## total_saturated_fatty_acids_g 19.8 [15.1;25.6] 32
## total_monounsaturated_fatty_acids_g 21.5 [17.4;30.4] 32
## total_polyunsaturated_fatty_acids_g 12.9 [8.23;16.7] 32
## total_saturated_fatty_acids_g_2 20.2 [15.5;25.6] 32
## total_monounsaturated_fatty_acids_g_2 22.6 [17.7;29.6] 32
## total_polyunsaturated_fatty_acids_g_2 12.2 [7.63;15.0] 32
## polyunsaturated_to_saturated_fatty_acid_ratio 24.8 [19.2;31.6] 32
## cholesterol_mg 198 [142;281] 32
## cholesterol_to_saturated_fatty_acid_index 30.5 [23.8;40.7] 32
## carbohydrate_g 178 [145;212] 32
## total_sugars_g 82.5 [60.4;97.7] 32
## total_sugars_g_2 82.2 [60.2;100] 32
## added_sugars_g 32.9 [18.8;47.8] 32
## added_sugars_by_total_sugars_g 28.2 [16.3;44.2] 32
## available_carbohydrate_g 146 [129;188] 32
## glycemic_index_glucose_reference 623 [495;783] 32
## glycemic_index_bread_reference 890 [707;1119] 32
## glycemic_load_glucose_reference 79.0 [70.8;106] 32
## glycemic_load_bread_reference 113 [101;152] 32
## fructose_g 15.9 [13.1;21.8] 32
## galactose_g 0.27 [0.15;0.51] 32
## glucose_g 16.5 [12.2;19.5] 32
## lactose_g 10.1 [4.68;23.0] 32
## maltose_g 1.35 [1.02;2.30] 32
## sucrose_g 27.1 [20.5;40.8] 32
## starch_g 58.7 [41.6;73.5] 32
## dietary_fiber_g 19.6 [12.5;21.6] 32
## total_dietary_fiber_g 20.0 [16.1;24.3] 32
## soluble_dietary_fiber_g 7.14 [5.44;8.83] 32
## insoluble_dietary_fiber_g 13.8 [8.90;15.9] 32
## pectins_g 3.37 [2.22;3.93] 32
## retinol_mcg 372 [204;613] 32
## total_vitamin_a_activity_international_units_iu 8752 [5874;12708] 32
## vitamin_a_retinol_activity_mcg 791 [523;1103] 32
## total_vitamin_a_activity_re_mcg 1131 [812;1673] 32
## beta_carotene_mcg 3808 [2438;5607] 32
## beta_carotene_mcg_2 4608 [2882;6292] 32
## alpha_carotene_mcg 923 [297;1071] 32
## beta_cryptoxanthin_mcg 106 [78.1;149] 32
## lutein_zeaxanthin_mcg 2019 [1190;4857] 32
## lycopene_mcg 3253 [2527;4363] 32
## vitamin_e_as_alpha_tocopherol_mg 8.08 [5.67;10.6] 32
## vitamin_e_alpha_tocopherol_mg 7.94 [5.90;11.4] 32
## added_alpha_tocopherol_mg 0.15 [0.03;0.46] 32
## total_alpha_tocopherol_mg 9.13 [7.26;14.0] 32
## beta_tocopherol_mg 0.38 [0.27;0.61] 32
## gamma_tocopherol_mg 9.94 [6.95;12.1] 32
## delta_tocopherol_mg 2.01 [1.42;2.44] 32
## vitamin_e_international_units_iu 11.9 [8.84;17.8] 32
## natural_alpha_tocopherol_rrr_alpha_tocopherol_or_d_alpha_tocopherol_mg 7.66 [5.77;9.55] 32
## synthetic_alpha_tocopherol_all_rac_alpha_tocopherol_or_dl_alpha_tocopherol_mg 0.21 [0.08;0.65] 32
## vitamin_k_mcg 136 [70.8;262] 32
## vitamin_c_mg 101 [57.4;140] 32
## thiamin_vitamin_b1_mg 1.16 [0.96;1.53] 32
## riboflavin_vitamin_b2_mg 1.94 [1.39;2.74] 32
## niacin_mg 17.1 [14.0;21.3] 32
## niacin_mg_2 29.0 [22.8;37.0] 32
## vitamin_b6_mg 1.64 [1.29;2.22] 32
## total_folate_mcg 382 [257;460] 32
## folate_dietary_folate_mcg 435 [314;563] 32
## food_folate_mcg 253 [174;320] 32
## folic_acid_mcg 83.8 [50.9;140] 32
## vitamin_b12_mcg 3.92 [2.51;5.65] 32
## added_vitamin_b12_mcg 0.22 [0.07;0.99] 32
## pantothenic_acid_mg 5.46 [4.32;6.67] 32
## vitamin_d_d2_d3_mcg 4.24 [2.30;6.11] 32
## vitamin_d_calciferol_mcg 4.54 [2.41;6.71] 32
## vitamin_d_ergocalciferol_mcg 0.00 [0.00;0.00] 32
## vitamin_d_cholecalciferol_mcg 4.54 [2.34;6.71] 32
## calcium_mg 903 [547;1269] 32
## phosphorus_mg 1048 [849;1562] 32
## magnesium_mg 300 [234;334] 32
## iron_mg 10.0 [8.12;14.6] 32
## zinc_mg 8.24 [6.83;11.7] 32
## copper_mg 1.23 [0.95;1.48] 32
## selenium_mcg 74.8 [59.3;100] 32
## sodium_mg 2378 [1947;2945] 32
## potassium_mg 2810 [2101;3553] 32
## manganese_mg 3.00 [2.38;4.38] 32
## sfa_4_0_butanoic_g 0.53 [0.28;0.69] 32
## sfa_6_0_hexanoic_g 0.29 [0.15;0.40] 32
## sfa_8_0_octanoic_g 0.21 [0.14;0.27] 32
## sfa_10_0_decanoic_g 0.44 [0.28;0.59] 32
## sfa_12_0_dodecanoic_g 0.62 [0.43;0.74] 32
## sfa_14_0_tetradecanoic_g 2.01 [1.21;2.41] 32
## sfa_16_0_hexadecanoic_g 10.4 [8.38;13.2] 32
## sfa_17_0_margaric_acid_g 0.12 [0.08;0.15] 32
## sfa_18_0_octadecanoic_g 4.71 [3.37;6.03] 32
## sfa_20_0_arachidic_acid_g 0.12 [0.09;0.18] 32
## sfa_22_0_behenic_acid_g 0.11 [0.05;0.18] 32
## mfa_16_1_hexadecenoic_g 0.90 [0.68;1.11] 32
## mfa_18_1_octadecenoic_g 19.5 [16.5;27.9] 32
## mfa_20_1_eicosenoic_g 0.21 [0.17;0.28] 32
## mfa_22_1_docosenoic_g 0.01 [0.00;0.01] 32
## mfa_14_1_myristoleic_g 0.12 [0.09;0.16] 32
## pfa_18_2_octadecadienoic_g 11.0 [6.99;14.9] 32
## pfa_18_3_octadecatrienoic_g 1.22 [0.93;1.65] 32
## pfa_18_3_n3_alpha_linolenic_g 1.08 [0.78;1.52] 32
## pfa_18_4_octadecatetraenoic_g 0.01 [0.00;0.01] 32
## pfa_20_4_eicosatetraenoic_g 0.08 [0.06;0.13] 32
## pfa_20_5_eicosapentaenoic_g 0.02 [0.01;0.03] 32
## pfa_22_5_docosapentaenoic_g 0.01 [0.01;0.02] 32
## pfa_22_6_docosahexaenoic_g 0.05 [0.03;0.08] 32
## trans_18_1_trans_octadecenoic_acid_elaidic_acid_g 2.04 [1.59;2.58] 32
## trans_18_2_trans_octadecadienoic_acid_linolelaidic_acid_incl_c_t_t_c_t_t_g 0.29 [0.23;0.40] 32
## trans_16_1_trans_hexadecenoic_acid_g 0.05 [0.04;0.06] 32
## total_trans_fatty_acitds_g 2.45 [1.89;3.02] 32
## omega_3_fatty_acids_g 1.27 [0.85;1.69] 32
## cla_18_2_linoleic_g 0.10 [0.07;0.15] 32
## cla_cis9_trans11_g 0.09 [0.06;0.12] 32
## cla_trans10_cis12_g 0.02 [0.01;0.02] 32
## tryptophan_g 0.70 [0.53;1.01] 32
## threonine_g 2.34 [1.74;3.30] 32
## isoleucine_g 2.66 [1.97;3.84] 32
## leucine_g 4.63 [3.45;6.45] 32
## lysine_g 3.95 [2.92;5.50] 32
## methionine_g 1.31 [0.98;1.83] 32
## cystine_g 0.74 [0.60;0.99] 32
## phenylalanine_g 2.63 [1.99;3.66] 32
## tyrosine_g 2.08 [1.58;2.84] 32
## valine_g 3.04 [2.34;4.33] 32
## arginine_g 3.32 [2.52;4.04] 32
## histidine_g 1.69 [1.26;2.28] 32
## alanine_g 2.87 [2.21;3.47] 32
## aspartic_acid_g 5.77 [4.36;7.55] 32
## glutamin_acid_g 11.4 [8.08;16.1] 32
## glycine_g 2.48 [1.97;3.00] 32
## proline_g 3.84 [2.94;5.84] 32
## serine_g 2.68 [2.03;3.72] 32
## daidzein_mg 0.38 [0.24;0.59] 32
## genistein_mg 0.38 [0.25;0.66] 32
## glycitein_mg 0.05 [0.02;0.09] 32
## coumestrol_mg 0.09 [0.05;0.20] 32
## biochanin_a_mg 0.11 [0.06;0.22] 32
## formononetin_mg 0.00 [0.00;0.00] 32
## erythritol_g 0.00 [0.00;0.00] 32
## inositol_g 0.38 [0.29;0.53] 32
## isomalt_g 0.00 [0.00;0.00] 32
## lactitol_g 0.00 [0.00;0.00] 32
## maltitol_g 0.00 [0.00;0.00] 32
## mannitol_g 0.34 [0.19;0.52] 32
## pinitol_g 0.01 [0.00;0.01] 32
## sorbitol_g 0.56 [0.38;0.90] 32
## xylitol_g 0.03 [0.02;0.04] 32
## caffeine_mg 186 [142;326] 32
## theobromine_mg 16.4 [9.41;25.0] 32
## moisture_g 3020 [2515;3982] 32
## water_g 3040 [2551;3992] 32
## total_choline_mg 268 [220;335] 32
## aspartame_mg 4.38 [0.82;7.71] 32
## saccharin_mg 0.00 [0.00;0.45] 32
## phytic_acid_mg 470 [333;717] 32
## oxalic_acid_mg 211 [115;332] 32
## x3_methylhistidine_mg 10.1 [6.34;14.4] 32
## sucrose_polyester_g 0.00 [0.00;0.01] 32
## ash_g 16.6 [13.8;20.3] 32
## acesulfame_potassium_mg 0.08 [0.00;0.24] 32
## sucralose_mg 0.56 [0.00;2.17] 32
## tagatose_g 0.79 [0.47;1.40] 32
## betaine_mg 98.5 [70.2;130] 32
## citrus_melon_berry_fruit_cups 0.36 [0.19;0.59] 32
## other_fruit_cups 1.04 [0.64;1.47] 32
## fruits_cups 1.44 [0.89;2.10] 32
## juice_fruit_cups 0.06 [0.00;0.29] 32
## total_fruit_cups 1.63 [1.17;2.35] 32
## dark_green_vegetable_cups 0.22 [0.13;0.77] 32
## red_orange_tomato_vegetable_cups 0.22 [0.17;0.30] 32
## red_orange_other_vegetable_cups 0.20 [0.06;0.24] 32
## total_red_orange_vegetable_cups 0.46 [0.25;0.56] 32
## white_potato_starchy_vegetable_cups 0.33 [0.18;0.48] 32
## other_starchy_vegetable_cups 0.09 [0.05;0.16] 32
## total_starchy_vegetable_cups 0.44 [0.26;0.60] 32
## other_vegetable_cups 0.52 [0.25;0.69] 32
## total_vegetable_cups 1.82 [1.37;2.44] 32
## legumes_vegetable_cups 0.04 [0.03;0.13] 32
## whole_grain_oz 0.54 [0.37;0.91] 32
## refined_grain_oz 2.56 [1.32;3.69] 32
## total_number_of_grain_oz 3.13 [2.06;4.16] 32
## meat_from_beef_pork_veal_lamb_and_game_protein_foods_oz 1.04 [0.45;1.35] 32
## cured_meat_protein_foods_oz 0.34 [0.16;0.56] 32
## meat_from_organ_meat_protein_foods_oz 0.00 [0.00;0.01] 32
## poultry_protein_foods_oz 0.58 [0.26;1.39] 32
## seafood_high_in_omega_3_protein_foods_oz 0.14 [0.03;0.32] 32
## seafood_low_in_omega_3_protein_foods_oz 0.15 [0.07;0.34] 32
## seafood_oz 0.40 [0.23;0.70] 32
## total_meat_poultry_seafood_protein_foods_oz 2.84 [1.77;3.89] 32
## eggs_protein_foods_oz 0.34 [0.18;0.57] 32
## meat_poultry_and_eggs_oz 2.71 [2.02;3.75] 32
## soy_products_protein_foods_oz 0.01 [0.01;0.04] 32
## nuts_and_seeds_protein_foods_oz 0.61 [0.27;1.28] 32
## legumes_protein_foods_oz 0.17 [0.10;0.53] 32
## nuts_seeds_soy_and_legumes_oz 0.95 [0.40;1.77] 32
## total_protein_foods_oz 4.10 [3.04;5.18] 32
## milk_cups 0.58 [0.19;1.60] 32
## yogurt_cups 0.08 [0.02;0.26] 32
## cheese_cups 0.48 [0.34;0.77] 32
## total_dairy_cups 1.41 [0.68;2.34] 32
## oil_g 19.0 [11.1;24.0] 32
## solid_fat_g_2 27.5 [20.1;34.8] 32
## added_sugars_tsp 6.78 [4.12;10.5] 32
## alcohol_drinks 0.20 [0.00;0.81] 32
## energy_from_fat_percent_kcal 35.4 [32.5;38.0] 32
## energy_from_carbohydrates_percent_kcal 48.1 [41.7;51.5] 32
## energy_from_protein_percent_kcal 16.1 [13.5;19.3] 32
## energy_from_alcohol_percent_kcal 1.41 [0.00;5.81] 32
## energy_from_saturated_fatty_acids_percent_kcal 11.5 [10.1;13.7] 32
## energy_from_monounsaturated_fatty_acids_percent_kcal 12.6 [11.7;13.5] 32
## energy_from_polyunsaturated_fatty_acids_percent_kcal 7.44 [6.17;7.94] 32
## supp_energy_kcal_dsid 0.83 [0.00;9.43] 32
## supp_protein_g_dsid 0.00 [0.00;0.00] 32
## supp_total_fat_g_dsid 0.00 [0.00;0.02] 32
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 [0.00;0.00] 32
## supp_cholesterol_mg_dsid 0.00 [0.00;425] 32
## supp_carbohydrate_g_dsid 0.00 [0.00;0.05] 32
## supp_total_sugars_g_dsid 0.00 [0.00;0.07] 32
## supp_dietary_fiber_g_dsid 0.00 [0.00;0.00] 32
## supp_soluble_dietary_fiber_g_dsid 0.00 [0.00;0.00] 32
## supp_total_vitamin_a_activity_iu_dsid 0.00 [0.00;1964] 32
## supp_vitamin_a_rae_mcg_dsid 0.00 [0.00;589] 32
## supp_beta_carotene_percent_dsid 0.00 [0.00;13.4] 32
## supp_lutein_zeaxanthin_mcg_dsid 0.00 [0.00;210] 32
## supp_lycopene_mcg_dsid 0.00 [0.00;0.00] 32
## supp_biotin_mcg_dsid 0.00 [0.00;21.4] 32
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 0.00 [0.00;21.1] 32
## supp_vitamin_e_iu_dsid 0.00 [0.00;31.4] 32
## supp_vitamin_k_mcg_dsid 0.00 [0.00;10.7] 32
## supp_vitamin_c_mg_dsid 19.3 [0.00;60.0] 32
## supp_thiamin_vitamin_b1_mg_dsid 0.00 [0.00;1.50] 32
## supp_riboflavin_vitamin_b2_mg_dsid 0.00 [0.00;1.70] 32
## supp_niacin_mg_dsid 0.00 [0.00;18.4] 32
## supp_vitamin_b6_mg_dsid 0.00 [0.00;2.32] 32
## supp_folate_dfe_mcg_dsid 0.00 [0.00;534] 32
## supp_folic_acid_mcg_dsid 0.00 [0.00;314] 32
## supp_vitamin_b12_mcg_dsid 0.00 [0.00;13.5] 32
## supp_pantothenic_acid_mg_dsid 0.00 [0.00;7.85] 32
## supp_vitamin_d_d2_d3_mcg_dsid 13.4 [0.60;27.5] 32
## supp_boron_mcg_dsid 0.00 [0.00;107] 32
## supp_calcium_mg_dsid 196 [0.00;393] 32
## supp_chloride_mg_dsid 0.00 [0.00;28.3] 32
## supp_chromium_mcg_dsid 0.00 [0.00;37.5] 32
## supp_copper_mg_dsid 0.00 [0.00;0.40] 32
## supp_fluoride_mg_dsid 0.00 [0.00;0.00] 32
## supp_iodine_mcg_dsid 0.00 [0.00;58.9] 32
## supp_iron_mg_dsid 0.00 [0.00;0.00] 32
## supp_magnesium_mg_dsid 0.00 [0.00;61.2] 32
## supp_manganese_mg_dsid 0.00 [0.00;0.90] 32
## supp_molybdenum_mcg_dsid 0.00 [0.00;33.5] 32
## supp_nickel_mcg_dsid 0.00 [0.00;1.96] 32
## supp_phosphorus_mg_dsid 0.00 [0.00;7.85] 32
## supp_potassium_mg_dsid 0.00 [0.00;31.4] 32
## supp_selenium_mcg_dsid 0.00 [0.00;21.6] 32
## supp_silicon_mg_dsid 0.00 [0.00;0.78] 32
## supp_sodium_mg_dsid 0.00 [0.00;0.00] 32
## supp_tin_mcg_dsid 0.00 [0.00;0.00] 32
## supp_vanadium_mcg_dsid 0.00 [0.00;3.93] 32
## supp_zinc_mg_dsid 0.00 [0.00;11.0] 32
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.00 [0.00;0.00] 32
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.00 [0.00;0.00] 32
## supp_omega_3_fatty_acids_g_dsid 0.00 [0.00;0.00] 32
## supp_inositol_g_dsid 0.00 [0.00;0.00] 32
## supp_choline_mg_dsid 0.00 [0.00;0.00] 32
## total_hei_2015_score 67.1 [61.0;74.8] 32
## hei_2015_total_vegetables_component_score 5.00 [3.88;5.00] 32
## hei_2015_greens_and_beans_component_score 5.00 [3.44;5.00] 32
## hei_2015_total_fruits_component_score 5.00 [4.07;5.00] 32
## hei_2015_whole_fruits_component_score 5.00 [5.00;5.00] 32
## hei_2015_whole_grains_component_score 2.30 [1.76;4.74] 32
## hei_2015_dairy_component_score 8.04 [4.47;9.94] 32
## hei_2015_total_protein_foods_component_score 5.00 [4.90;5.00] 32
## hei_2015_seafood_and_plant_proteins_component_score 5.00 [3.77;5.00] 32
## hei_2015_fatty_acids_component_score 3.60 [1.94;5.38] 32
## hei_2015_sodium_component_score 4.84 [3.62;6.50] 32
## hei_2015_refined_grains_component_score 10.0 [8.70;10.0] 32
## hei_2015_saturated_fats_component_score 5.63 [2.84;7.37] 32
## hei_2015_added_sugars_component_score 9.75 [8.37;10.0] 32
## hei_2015_density_of_total_vegetables_per_1000_kcal 1.21 [0.85;1.57] 32
## hei_2015_density_of_greens_and_beans_per_1000_kcal 0.22 [0.14;0.46] 32
## hei_2015_density_of_total_fruits_per_1000_kcal 0.99 [0.65;1.64] 32
## hei_2015_density_of_whole_fruits_per_1000_kcal 0.86 [0.61;1.34] 32
## hei_2015_density_of_whole_grains_per_1000_kcal 0.34 [0.26;0.71] 32
## hei_2015_density_of_dairy_per_1000_kcal 1.04 [0.58;1.30] 32
## hei_2015_density_of_total_protein_foods_per_1000_kcal 3.00 [2.50;3.53] 32
## hei_2015_density_of_seafood_and_plant_proteins_per_1000_kcal 1.05 [0.60;1.39] 32
## hei_2015_fatty_acid_ratio 1.67 [1.46;1.90] 32
## hei_2015_density_of_sodium_per_1000_kcal 1.56 [1.42;1.67] 32
## hei_2015_density_of_refined_grains_per_1000_kcal 1.60 [1.26;2.13] 32
## hei_2015_percent_of_calories_from_saturated_fats 11.5 [10.1;13.7] 32
## hei_2015_percent_of_calories_from_added_sugars 6.98 [5.27;9.68] 32
## sga_symmpt_score 0.00 [0.00;4.00] 32
## ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯update(restab, show.n=TRUE)##
## --------Summary descriptives table by 'muscle_loss'---------
##
## __________________________________________________________________________________________________________________________________________________
## maybe no yes p.overall N
## N=7 N=12 N=13
## ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯
## importance_nutr 1.00 [0.00;2.50] 2.00 [1.50;2.00] 3.00 [2.00;3.00] 0.050 32
## cancer_type 2.00 [1.50;2.00] 2.00 [1.00;2.00] 2.00 [1.00;2.00] 0.799 32
## age 69.0 [49.0;71.5] 63.0 [56.2;68.0] 62.0 [51.0;67.0] 0.956 32
## sex 1.00 [1.00;1.50] 1.00 [1.00;1.00] 1.00 [1.00;1.00] 0.494 32
## stage 1.00 [1.00;2.50] 1.00 [1.00;2.00] 1.00 [1.00;2.00] 0.966 28
## wt_chg_6mo_amt_lbs 5.00 [0.00;10.0] 0.00 [0.00;0.00] -5.00 [-12.70;0.00] 0.136 32
## sga_appetite 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.050 32
## sga_diarrhea 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.221 32
## sga_taste 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.348 32
## sga_nausea 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.227 32
## sga_dry 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.482 32
## sga_full 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.050 32
## sga_vomit 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.221 32
## sga_mouth 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.381 32
## sga_tired 2.00 [1.50;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.031 32
## sga_constipation 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.221 32
## sga_smell 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.096 32
## sga_pain 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.747 32
## sga_other 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.457 32
## tx_chemo 2.00 [1.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.390 32
## tx_radiation 1.00 [1.00;1.00] 2.00 [1.00;2.00] 1.00 [1.00;2.00] 0.081 32
## tx_surgery 1.00 [1.00;1.00] 1.00 [1.00;1.00] 1.00 [1.00;1.00] 0.096 32
## tx_hormone 2.00 [1.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.390 32
## tx_other 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] . 32
## tx_unsure 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] . 32
## tx_surveillance 2.00 [1.50;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.358 32
## tx_none 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] . 32
## marital 3.00 [2.50;3.00] 3.00 [3.00;3.25] 3.00 [3.00;4.00] 0.220 32
## education 3.00 [2.00;3.50] 4.00 [2.00;5.00] 4.00 [3.00;4.00] 0.474 32
## income 1.00 [0.50;1.50] 1.00 [1.00;1.00] 3.00 [1.25;3.00] 0.289 22
## occupation 1.00 [0.00;2.75] 0.00 [0.00;2.00] 1.00 [0.00;1.00] 0.804 27
## born_canada 1.00 [1.00;1.00] 1.00 [1.00;1.00] 1.00 [1.00;1.00] 0.861 32
## ethnic 1.00 [1.00;1.00] 1.00 [1.00;1.00] 1.00 [1.00;1.00] . 32
## gram_weight_g 3358 [3031;4502] 2958 [2277;3634] 3622 [3222;4763] 0.381 32
## energy_kcal 1766 [1338;1916] 1475 [1264;1582] 1531 [1078;2305] 0.690 32
## gluten_g 4.41 [4.28;5.57] 4.44 [3.00;5.54] 6.13 [2.33;6.53] 0.962 32
## alcohol_g 0.28 [0.01;12.6] 11.3 [3.61;20.7] 1.50 [0.00;3.28] 0.024 32
## protein_g 62.3 [49.2;94.1] 61.3 [47.7;65.8] 62.7 [46.4;86.2] 0.885 32
## nitrogen_g 10.0 [7.72;14.8] 9.91 [7.74;10.5] 9.94 [7.45;13.7] 0.886 32
## total_protein_g 62.2 [48.0;92.0] 61.0 [47.4;65.1] 61.4 [46.5;84.2] 0.877 32
## animal_protein_g 42.8 [34.1;67.5] 37.8 [28.0;43.2] 36.5 [27.1;54.5] 0.638 32
## vegetable_protein_g 19.4 [14.2;24.5] 19.9 [17.4;26.2] 21.9 [13.4;29.7] 0.889 32
## total_fat_g 66.7 [52.6;78.2] 60.4 [53.1;65.7] 58.6 [39.6;98.3] 0.789 32
## solid_fat_g 34.3 [28.3;41.2] 30.4 [21.9;30.8] 28.1 [21.8;50.2] 0.362 32
## total_saturated_fatty_acids_g 25.1 [20.3;27.2] 19.6 [15.3;21.6] 18.7 [14.1;35.8] 0.495 32
## total_monounsaturated_fatty_acids_g 21.7 [17.6;27.7] 20.3 [18.8;26.3] 22.3 [17.4;34.4] 0.906 32
## total_polyunsaturated_fatty_acids_g 12.3 [9.69;16.0] 12.3 [10.0;14.8] 13.1 [8.05;21.1] 0.803 32
## total_saturated_fatty_acids_g_2 25.3 [20.8;27.2] 19.3 [15.2;21.8] 18.9 [14.4;35.8] 0.393 32
## total_monounsaturated_fatty_acids_g_2 24.0 [18.4;27.1] 21.8 [19.2;28.3] 22.6 [18.0;35.6] 0.927 32
## total_polyunsaturated_fatty_acids_g_2 12.2 [8.57;14.6] 11.8 [9.16;13.5] 12.5 [7.76;17.8] 0.782 32
## polyunsaturated_to_saturated_fatty_acid_ratio 20.5 [13.5;26.6] 21.8 [19.2;31.3] 26.1 [24.0;31.8] 0.248 32
## cholesterol_mg 251 [169;371] 194 [171;223] 177 [122;278] 0.481 32
## cholesterol_to_saturated_fatty_acid_index 39.3 [29.0;46.3] 29.9 [26.2;32.3] 27.1 [23.9;49.4] 0.497 32
## carbohydrate_g 196 [158;225] 156 [145;177] 200 [152;296] 0.363 32
## total_sugars_g 94.2 [85.1;103] 64.4 [55.5;76.1] 95.0 [77.2;130] 0.078 32
## total_sugars_g_2 92.9 [84.9;105] 64.4 [54.9;75.0] 94.8 [76.5;129] 0.060 32
## added_sugars_g 54.0 [30.4;58.0] 19.9 [18.0;24.9] 35.9 [32.2;56.1] 0.019 32
## added_sugars_by_total_sugars_g 48.0 [28.1;51.3] 17.0 [16.0;22.2] 31.5 [28.0;52.1] 0.024 32
## available_carbohydrate_g 178 [143;209] 136 [128;143] 178 [132;270] 0.297 32
## glycemic_index_glucose_reference 770 [519;807] 615 [501;733] 605 [507;782] 0.747 32
## glycemic_index_bread_reference 1101 [742;1154] 879 [717;1048] 865 [725;1119] 0.747 32
## glycemic_load_glucose_reference 103 [76.7;129] 72.6 [70.8;76.3] 96.0 [70.6;151] 0.276 32
## glycemic_load_bread_reference 147 [110;185] 104 [101;109] 137 [101;216] 0.276 32
## fructose_g 16.2 [9.60;20.1] 15.5 [13.4;20.3] 20.2 [14.7;25.6] 0.377 32
## galactose_g 0.27 [0.21;0.39] 0.24 [0.16;0.35] 0.51 [0.14;0.71] 0.477 32
## glucose_g 16.9 [10.7;19.9] 14.2 [12.2;18.4] 17.9 [13.3;26.6] 0.404 32
## lactose_g 20.0 [12.2;23.7] 7.68 [3.76;13.7] 8.50 [7.57;29.4] 0.204 32
## maltose_g 1.56 [1.07;2.08] 1.27 [1.02;1.60] 1.56 [1.08;2.53] 0.716 32
## sucrose_g 40.2 [28.2;44.0] 22.0 [18.4;24.6] 34.2 [26.8;53.3] 0.030 32
## starch_g 57.1 [47.6;70.5] 57.8 [49.3;64.8] 67.4 [38.6;114] 0.975 32
## dietary_fiber_g 14.1 [10.3;19.9] 18.1 [13.5;27.3] 21.1 [14.9;21.9] 0.290 32
## total_dietary_fiber_g 17.0 [13.5;22.0] 18.8 [16.1;27.7] 22.5 [17.5;24.3] 0.380 32
## soluble_dietary_fiber_g 7.50 [5.62;8.14] 7.14 [6.48;8.97] 6.95 [5.40;8.86] 0.829 32
## insoluble_dietary_fiber_g 9.21 [7.34;13.8] 12.9 [9.58;20.1] 15.4 [9.92;15.9] 0.197 32
## pectins_g 2.51 [1.61;3.52] 3.62 [2.32;4.63] 3.28 [2.69;4.10] 0.349 32
## retinol_mcg 461 [367;537] 323 [257;485] 420 [201;661] 0.733 32
## total_vitamin_a_activity_international_units_iu 8497 [3384;11745] 9743 [6865;14698] 8674 [7709;9908] 0.729 32
## vitamin_a_retinol_activity_mcg 798 [517;990] 795 [538;1149] 783 [541;1118] 0.933 32
## total_vitamin_a_activity_re_mcg 1148 [627;1475] 1247 [908;1870] 1113 [909;1454] 0.776 32
## beta_carotene_mcg 3544 [1114;5543] 4061 [2694;6618] 3627 [3122;4279] 0.681 32
## beta_carotene_mcg_2 4202 [1316;6143] 5038 [3453;7620] 4432 [3445;4901] 0.617 32
## alpha_carotene_mcg 364 [255;1357] 947 [281;1035] 1000 [399;1161] 0.680 32
## beta_cryptoxanthin_mcg 53.0 [38.9;138] 128 [99.4;184] 97.8 [81.4;117] 0.265 32
## lutein_zeaxanthin_mcg 1823 [965;4048] 3142 [1534;7581] 1925 [1142;3320] 0.349 32
## lycopene_mcg 2950 [2259;4384] 3650 [2925;4174] 2955 [2549;4106] 0.783 32
## vitamin_e_as_alpha_tocopherol_mg 7.23 [4.76;8.41] 7.00 [5.82;11.5] 8.89 [7.49;10.4] 0.512 32
## vitamin_e_alpha_tocopherol_mg 7.36 [5.19;7.94] 7.14 [6.15;11.4] 8.83 [7.22;12.5] 0.492 32
## added_alpha_tocopherol_mg 0.14 [0.00;0.22] 0.10 [0.03;0.20] 0.45 [0.09;1.26] 0.227 32
## total_alpha_tocopherol_mg 8.79 [6.68;9.39] 8.50 [7.26;14.0] 10.3 [8.66;14.6] 0.526 32
## beta_tocopherol_mg 0.44 [0.30;0.64] 0.30 [0.26;0.36] 0.50 [0.38;0.78] 0.132 32
## gamma_tocopherol_mg 10.8 [7.18;11.4] 9.78 [6.30;10.6] 10.0 [7.66;15.8] 0.653 32
## delta_tocopherol_mg 2.04 [1.36;2.38] 1.88 [1.42;2.37] 2.01 [1.53;3.24] 0.891 32
## vitamin_e_international_units_iu 11.0 [7.91;11.8] 10.7 [9.21;17.8] 13.2 [10.8;19.4] 0.444 32
## natural_alpha_tocopherol_rrr_alpha_tocopherol_or_d_alpha_tocopherol_mg 7.32 [4.88;7.85] 7.02 [5.94;9.46] 8.26 [7.03;9.81] 0.477 32
## synthetic_alpha_tocopherol_all_rac_alpha_tocopherol_or_dl_alpha_tocopherol_mg 0.16 [0.06;0.80] 0.30 [0.04;0.65] 0.22 [0.09;0.63] 0.880 32
## vitamin_k_mcg 133 [69.8;241] 174 [106;399] 103 [79.3;244] 0.527 32
## vitamin_c_mg 103 [35.6;127] 121 [84.7;151] 82.5 [53.0;119] 0.252 32
## thiamin_vitamin_b1_mg 1.21 [0.93;1.43] 1.13 [0.98;1.41] 1.16 [0.96;1.67] 0.934 32
## riboflavin_vitamin_b2_mg 2.03 [1.76;2.68] 1.76 [1.52;2.38] 2.23 [1.13;2.91] 0.799 32
## niacin_mg 18.6 [12.9;23.6] 17.4 [14.2;21.3] 17.1 [13.8;21.2] 0.959 32
## niacin_mg_2 30.2 [21.9;39.7] 28.6 [24.1;33.8] 29.1 [23.0;34.5] 0.957 32
## vitamin_b6_mg 1.57 [1.11;2.16] 1.88 [1.44;2.24] 1.59 [1.33;2.20] 0.758 32
## total_folate_mcg 379 [250;407] 372 [264;511] 384 [264;441] 0.660 32
## folate_dietary_folate_mcg 434 [324;488] 443 [324;608] 437 [307;556] 0.748 32
## food_folate_mcg 238 [145;305] 242 [197;351] 269 [172;322] 0.776 32
## folic_acid_mcg 80.4 [64.7;156] 83.8 [52.9;105] 101 [38.8;152] 0.912 32
## vitamin_b12_mcg 4.26 [3.56;5.80] 3.37 [2.66;5.15] 4.17 [2.07;7.54] 0.816 32
## added_vitamin_b12_mcg 0.20 [0.01;0.71] 0.21 [0.07;0.54] 0.25 [0.16;1.00] 0.728 32
## pantothenic_acid_mg 5.66 [4.76;7.31] 5.63 [4.60;6.48] 5.04 [3.44;6.91] 0.870 32
## vitamin_d_d2_d3_mcg 5.52 [4.46;5.94] 3.20 [2.30;5.75] 4.02 [2.01;6.66] 0.625 32
## vitamin_d_calciferol_mcg 5.88 [4.78;6.40] 3.54 [2.57;5.26] 3.98 [1.88;7.01] 0.569 32
## vitamin_d_ergocalciferol_mcg 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.01] 0.300 32
## vitamin_d_cholecalciferol_mcg 5.88 [4.78;6.40] 3.54 [2.50;5.26] 3.64 [1.88;7.01] 0.584 32
## calcium_mg 1084 [885;1244] 817 [519;978] 880 [554;1644] 0.617 32
## phosphorus_mg 1132 [958;1623] 986 [897;1199] 1096 [699;1824] 0.820 32
## magnesium_mg 291 [266;311] 308 [234;326] 303 [220;400] 0.969 32
## iron_mg 10.6 [8.02;12.6] 9.33 [8.28;13.4] 10.4 [7.79;14.6] 0.986 32
## zinc_mg 8.28 [7.62;12.1] 8.61 [7.67;9.54] 8.07 [5.47;12.5] 0.964 32
## copper_mg 1.07 [0.96;1.23] 1.32 [0.93;1.48] 1.28 [1.18;1.50] 0.519 32
## selenium_mcg 79.3 [62.3;113] 71.7 [65.6;91.1] 76.8 [54.2;106] 0.638 32
## sodium_mg 2581 [1848;3236] 2538 [1968;2800] 2230 [1570;3048] 0.942 32
## potassium_mg 3004 [2268;3247] 2715 [2330;3823] 2890 [2077;3443] 0.968 32
## manganese_mg 2.76 [2.10;2.96] 3.20 [2.38;4.61] 3.24 [2.52;4.80] 0.301 32
## sfa_4_0_butanoic_g 0.53 [0.52;0.67] 0.51 [0.28;0.62] 0.42 [0.23;1.06] 0.583 32
## sfa_6_0_hexanoic_g 0.31 [0.30;0.41] 0.28 [0.15;0.32] 0.25 [0.13;0.57] 0.461 32
## sfa_8_0_octanoic_g 0.26 [0.22;0.30] 0.20 [0.12;0.24] 0.20 [0.15;0.43] 0.346 32
## sfa_10_0_decanoic_g 0.50 [0.46;0.60] 0.42 [0.26;0.52] 0.41 [0.31;0.89] 0.387 32
## sfa_12_0_dodecanoic_g 0.67 [0.62;0.88] 0.52 [0.36;0.63] 0.70 [0.44;1.15] 0.135 32
## sfa_14_0_tetradecanoic_g 2.08 [1.97;2.56] 1.92 [1.20;2.19] 1.61 [1.19;3.52] 0.564 32
## sfa_16_0_hexadecanoic_g 12.7 [10.4;14.2] 10.2 [9.28;11.2] 9.98 [7.46;17.8] 0.687 32
## sfa_17_0_margaric_acid_g 0.15 [0.12;0.16] 0.11 [0.09;0.12] 0.09 [0.08;0.17] 0.274 32
## sfa_18_0_octadecanoic_g 6.02 [4.68;6.51] 4.50 [3.30;4.95] 4.64 [3.30;7.50] 0.369 32
## sfa_20_0_arachidic_acid_g 0.10 [0.09;0.14] 0.12 [0.08;0.14] 0.15 [0.08;0.23] 0.791 32
## sfa_22_0_behenic_acid_g 0.09 [0.06;0.11] 0.12 [0.06;0.18] 0.14 [0.04;0.25] 0.934 32
## mfa_16_1_hexadecenoic_g 1.05 [0.72;1.07] 0.90 [0.82;1.06] 0.70 [0.66;1.20] 0.754 32
## mfa_18_1_octadecenoic_g 19.6 [16.1;25.5] 18.6 [17.1;24.0] 20.9 [16.8;32.5] 0.914 32
## mfa_20_1_eicosenoic_g 0.20 [0.15;0.28] 0.20 [0.19;0.22] 0.24 [0.11;0.32] 0.824 32
## mfa_22_1_docosenoic_g 0.01 [0.01;0.01] 0.00 [0.00;0.01] 0.01 [0.01;0.01] 0.449 32
## mfa_14_1_myristoleic_g 0.16 [0.15;0.17] 0.11 [0.10;0.13] 0.11 [0.08;0.19] 0.325 32
## pfa_18_2_octadecadienoic_g 11.0 [8.30;13.7] 10.6 [8.71;13.0] 11.7 [6.83;18.1] 0.838 32
## pfa_18_3_octadecatrienoic_g 1.14 [0.84;1.39] 1.23 [0.96;1.53] 1.34 [0.95;1.77] 0.783 32
## pfa_18_3_n3_alpha_linolenic_g 0.80 [0.73;1.31] 1.12 [0.82;1.44] 1.22 [0.80;1.52] 0.703 32
## pfa_18_4_octadecatetraenoic_g 0.01 [0.00;0.01] 0.00 [0.00;0.01] 0.01 [0.00;0.01] 0.643 32
## pfa_20_4_eicosatetraenoic_g 0.10 [0.08;0.18] 0.09 [0.07;0.12] 0.08 [0.04;0.12] 0.539 32
## pfa_20_5_eicosapentaenoic_g 0.02 [0.00;0.04] 0.02 [0.01;0.03] 0.02 [0.01;0.03] 0.965 32
## pfa_22_5_docosapentaenoic_g 0.01 [0.00;0.02] 0.01 [0.01;0.02] 0.01 [0.01;0.02] 0.847 32
## pfa_22_6_docosahexaenoic_g 0.04 [0.04;0.08] 0.05 [0.03;0.05] 0.05 [0.03;0.09] 0.968 32
## trans_18_1_trans_octadecenoic_acid_elaidic_acid_g 2.33 [1.87;2.74] 1.95 [1.57;2.38] 1.96 [1.59;4.02] 0.683 32
## trans_18_2_trans_octadecadienoic_acid_linolelaidic_acid_incl_c_t_t_c_t_t_g 0.34 [0.26;0.44] 0.29 [0.22;0.33] 0.27 [0.22;0.54] 0.528 32
## trans_16_1_trans_hexadecenoic_acid_g 0.06 [0.04;0.06] 0.04 [0.04;0.06] 0.05 [0.03;0.07] 0.675 32
## total_trans_fatty_acitds_g 2.88 [2.19;3.20] 2.31 [1.85;2.77] 2.27 [1.88;4.64] 0.617 32
## omega_3_fatty_acids_g 0.87 [0.76;1.56] 1.25 [0.88;1.54] 1.28 [0.87;1.72] 0.818 32
## cla_18_2_linoleic_g 0.11 [0.10;0.15] 0.10 [0.08;0.12] 0.08 [0.07;0.17] 0.651 32
## cla_cis9_trans11_g 0.09 [0.09;0.12] 0.08 [0.07;0.10] 0.07 [0.06;0.15] 0.611 32
## cla_trans10_cis12_g 0.02 [0.01;0.03] 0.02 [0.01;0.02] 0.01 [0.01;0.03] 0.693 32
## tryptophan_g 0.70 [0.58;1.06] 0.68 [0.56;0.75] 0.73 [0.53;1.02] 0.802 32
## threonine_g 2.42 [1.85;3.68] 2.26 [1.74;2.51] 2.52 [1.85;3.29] 0.851 32
## isoleucine_g 2.73 [2.17;4.22] 2.58 [1.97;2.88] 2.72 [2.09;3.92] 0.835 32
## leucine_g 4.71 [3.86;7.24] 4.51 [3.45;5.03] 4.83 [3.55;7.14] 0.813 32
## lysine_g 4.23 [3.24;6.51] 3.94 [2.92;4.46] 3.91 [2.99;5.40] 0.901 32
## methionine_g 1.42 [1.07;2.14] 1.30 [0.98;1.46] 1.30 [1.05;1.83] 0.868 32
## cystine_g 0.78 [0.54;1.14] 0.69 [0.60;0.82] 0.78 [0.60;0.99] 0.782 32
## phenylalanine_g 2.65 [2.19;4.08] 2.60 [2.26;2.87] 2.61 [1.97;4.11] 0.904 32
## tyrosine_g 2.12 [1.85;3.30] 2.00 [1.47;2.29] 2.05 [1.61;3.37] 0.791 32
## valine_g 3.10 [2.60;4.86] 2.94 [2.38;3.35] 3.08 [2.36;4.79] 0.835 32
## arginine_g 3.30 [2.26;4.70] 3.28 [2.74;3.69] 3.33 [2.53;3.96] 0.968 32
## histidine_g 1.68 [1.33;2.57] 1.67 [1.26;1.83] 1.73 [1.29;2.31] 0.922 32
## alanine_g 2.99 [2.05;4.34] 2.87 [2.21;3.04] 2.79 [2.29;3.32] 0.849 32
## aspartic_acid_g 5.84 [4.23;8.59] 5.62 [4.58;6.07] 5.85 [4.45;7.34] 0.954 32
## glutamin_acid_g 11.4 [9.55;17.2] 11.4 [8.85;12.5] 11.5 [7.94;17.6] 0.852 32
## glycine_g 2.66 [1.71;3.64] 2.53 [2.06;2.78] 2.45 [1.96;2.96] 0.789 32
## proline_g 3.90 [3.50;5.94] 3.82 [2.93;4.11] 3.79 [2.56;6.39] 0.820 32
## serine_g 2.68 [2.32;4.35] 2.58 [2.36;3.04] 2.74 [1.98;4.35] 0.888 32
## daidzein_mg 0.39 [0.28;0.52] 0.38 [0.24;0.65] 0.36 [0.18;0.57] 0.928 32
## genistein_mg 0.31 [0.23;0.67] 0.36 [0.27;0.66] 0.39 [0.18;0.58] 0.991 32
## glycitein_mg 0.03 [0.02;0.10] 0.04 [0.03;0.09] 0.05 [0.02;0.08] 0.931 32
## coumestrol_mg 0.17 [0.10;0.21] 0.11 [0.06;0.21] 0.08 [0.05;0.16] 0.343 32
## biochanin_a_mg 0.07 [0.06;0.10] 0.12 [0.09;0.23] 0.12 [0.04;0.23] 0.363 32
## formononetin_mg 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.01] 0.351 32
## erythritol_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.897 32
## inositol_g 0.40 [0.30;0.46] 0.50 [0.35;0.59] 0.29 [0.28;0.40] 0.118 32
## isomalt_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## lactitol_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## maltitol_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.472 32
## mannitol_g 0.20 [0.13;0.33] 0.32 [0.19;0.56] 0.35 [0.32;0.54] 0.183 32
## pinitol_g 0.01 [0.00;0.01] 0.00 [0.00;0.01] 0.01 [0.00;0.01] 0.932 32
## sorbitol_g 0.52 [0.36;0.55] 0.52 [0.38;0.69] 0.82 [0.44;1.38] 0.162 32
## xylitol_g 0.03 [0.02;0.03] 0.03 [0.02;0.04] 0.03 [0.02;0.04] 0.866 32
## caffeine_mg 211 [160;332] 194 [133;333] 184 [143;246] 0.900 32
## theobromine_mg 16.9 [9.93;23.1] 14.9 [11.7;19.3] 23.7 [5.43;39.0] 0.443 32
## moisture_g 2886 [2650;4110] 2702 [1907;3256] 3259 [2964;4285] 0.344 32
## water_g 2927 [2667;4136] 2713 [1922;3271] 3280 [2984;4307] 0.366 32
## total_choline_mg 280 [234;438] 271 [242;303] 267 [216;283] 0.671 32
## aspartame_mg 4.78 [1.58;9.19] 1.89 [0.82;8.99] 4.97 [1.02;7.44] 0.881 32
## saccharin_mg 0.00 [0.00;0.62] 0.00 [0.00;0.16] 0.00 [0.00;0.45] 0.847 32
## phytic_acid_mg 424 [336;489] 470 [360;678] 516 [334;787] 0.591 32
## oxalic_acid_mg 130 [97.5;281] 258 [127;407] 192 [119;264] 0.521 32
## x3_methylhistidine_mg 12.3 [8.11;15.6] 10.5 [9.84;14.4] 9.31 [3.45;12.2] 0.381 32
## sucrose_polyester_g 0.01 [0.00;0.01] 0.00 [0.00;0.01] 0.00 [0.00;0.01] 0.808 32
## ash_g 16.8 [15.6;21.4] 16.7 [14.0;18.3] 16.1 [13.2;20.3] 0.891 32
## acesulfame_potassium_mg 0.20 [0.04;0.62] 0.06 [0.00;0.11] 0.10 [0.00;0.29] 0.469 32
## sucralose_mg 0.66 [0.28;1.65] 0.17 [0.00;0.91] 2.12 [0.02;3.46] 0.226 32
## tagatose_g 1.11 [0.47;1.58] 0.67 [0.47;0.84] 1.26 [0.49;2.58] 0.333 32
## betaine_mg 89.6 [68.6;112] 98.4 [77.8;140] 108 [54.2;124] 0.686 32
## citrus_melon_berry_fruit_cups 0.12 [0.11;0.43] 0.40 [0.24;0.76] 0.33 [0.21;0.53] 0.302 32
## other_fruit_cups 0.64 [0.27;1.06] 0.86 [0.64;1.33] 1.35 [1.08;1.78] 0.051 32
## fruits_cups 0.88 [0.39;1.56] 1.34 [0.89;2.10] 1.77 [1.33;2.33] 0.101 32
## juice_fruit_cups 0.07 [0.03;0.24] 0.01 [0.00;0.32] 0.07 [0.00;0.30] 0.882 32
## total_fruit_cups 1.17 [0.40;1.83] 1.48 [1.21;2.16] 2.18 [1.49;2.51] 0.109 32
## dark_green_vegetable_cups 0.26 [0.14;0.73] 0.31 [0.18;0.85] 0.17 [0.12;0.37] 0.445 32
## red_orange_tomato_vegetable_cups 0.19 [0.12;0.24] 0.24 [0.18;0.30] 0.23 [0.19;0.35] 0.333 32
## red_orange_other_vegetable_cups 0.07 [0.05;0.27] 0.21 [0.07;0.22] 0.20 [0.11;0.25] 0.733 32
## total_red_orange_vegetable_cups 0.26 [0.17;0.52] 0.48 [0.32;0.60] 0.46 [0.35;0.54] 0.466 32
## white_potato_starchy_vegetable_cups 0.31 [0.28;0.46] 0.36 [0.19;0.41] 0.28 [0.11;0.54] 0.719 32
## other_starchy_vegetable_cups 0.07 [0.05;0.10] 0.11 [0.05;0.16] 0.11 [0.05;0.19] 0.443 32
## total_starchy_vegetable_cups 0.40 [0.36;0.55] 0.46 [0.23;0.60] 0.43 [0.27;0.71] 0.947 32
## other_vegetable_cups 0.62 [0.23;0.76] 0.60 [0.31;0.92] 0.41 [0.24;0.67] 0.541 32
## total_vegetable_cups 1.98 [1.16;2.25] 2.07 [1.52;2.63] 1.69 [1.39;2.42] 0.681 32
## legumes_vegetable_cups 0.04 [0.03;0.04] 0.08 [0.03;0.20] 0.05 [0.02;0.09] 0.519 32
## whole_grain_oz 0.56 [0.36;0.91] 0.57 [0.44;0.81] 0.46 [0.38;0.90] 0.910 32
## refined_grain_oz 2.47 [1.94;3.30] 2.56 [1.60;3.05] 2.64 [1.06;4.41] 0.932 32
## total_number_of_grain_oz 3.56 [2.66;3.65] 3.13 [2.25;4.00] 3.66 [1.45;4.94] 0.956 32
## meat_from_beef_pork_veal_lamb_and_game_protein_foods_oz 1.16 [0.97;1.45] 1.14 [0.65;1.28] 0.82 [0.27;1.40] 0.533 32
## cured_meat_protein_foods_oz 0.36 [0.25;0.54] 0.43 [0.28;0.60] 0.18 [0.11;0.54] 0.495 32
## meat_from_organ_meat_protein_foods_oz 0.00 [0.00;0.01] 0.00 [0.00;0.02] 0.00 [0.00;0.00] 0.579 32
## poultry_protein_foods_oz 1.22 [0.38;1.58] 0.82 [0.32;1.39] 0.36 [0.20;0.64] 0.435 32
## seafood_high_in_omega_3_protein_foods_oz 0.07 [0.03;0.35] 0.12 [0.06;0.27] 0.28 [0.03;0.32] 0.886 32
## seafood_low_in_omega_3_protein_foods_oz 0.28 [0.05;0.43] 0.15 [0.09;0.47] 0.13 [0.09;0.23] 0.864 32
## seafood_oz 0.57 [0.22;0.69] 0.37 [0.25;0.70] 0.37 [0.24;0.45] 0.934 32
## total_meat_poultry_seafood_protein_foods_oz 3.53 [2.34;3.99] 2.82 [2.46;3.81] 2.34 [0.97;3.28] 0.516 32
## eggs_protein_foods_oz 0.46 [0.34;0.97] 0.32 [0.17;0.36] 0.32 [0.16;0.57] 0.252 32
## meat_poultry_and_eggs_oz 3.40 [2.21;4.38] 2.71 [2.58;3.54] 2.42 [0.94;3.53] 0.573 32
## soy_products_protein_foods_oz 0.01 [0.01;0.04] 0.01 [0.01;0.02] 0.01 [0.00;0.05] 0.850 32
## nuts_and_seeds_protein_foods_oz 0.29 [0.26;0.59] 0.93 [0.37;1.07] 0.63 [0.23;1.45] 0.660 32
## legumes_protein_foods_oz 0.14 [0.12;0.18] 0.32 [0.10;0.80] 0.18 [0.08;0.37] 0.510 32
## nuts_seeds_soy_and_legumes_oz 0.57 [0.38;1.08] 1.28 [0.61;1.77] 0.96 [0.35;2.04] 0.672 32
## total_protein_foods_oz 4.59 [3.35;5.98] 4.08 [3.36;4.89] 4.01 [2.68;5.07] 0.735 32
## milk_cups 0.85 [0.52;1.77] 0.33 [0.21;0.90] 0.51 [0.14;1.90] 0.593 32
## yogurt_cups 0.04 [0.04;0.24] 0.04 [0.00;0.15] 0.26 [0.04;0.43] 0.063 32
## cheese_cups 0.46 [0.42;0.75] 0.60 [0.18;0.78] 0.41 [0.37;0.67] 0.914 32
## total_dairy_cups 2.19 [1.55;2.40] 0.92 [0.65;1.66] 1.19 [0.67;3.10] 0.244 32
## oil_g 14.4 [11.7;19.4] 18.5 [13.5;25.0] 21.7 [10.8;25.0] 0.813 32
## solid_fat_g_2 30.9 [26.3;37.9] 27.0 [19.7;28.4] 27.2 [19.5;46.7] 0.413 32
## added_sugars_tsp 10.8 [7.06;12.2] 4.41 [4.00;5.96] 7.23 [6.45;12.7] 0.037 32
## alcohol_drinks 0.02 [0.00;0.90] 0.81 [0.26;1.48] 0.11 [0.00;0.24] 0.027 32
## energy_from_fat_percent_kcal 34.9 [33.4;36.6] 35.4 [33.5;38.2] 35.4 [32.7;38.4] 0.899 32
## energy_from_carbohydrates_percent_kcal 48.3 [41.2;49.1] 44.5 [41.5;48.5] 51.6 [46.9;52.8] 0.051 32
## energy_from_protein_percent_kcal 15.5 [14.0;18.9] 16.1 [15.0;17.7] 17.0 [13.1;19.8] 0.953 32
## energy_from_alcohol_percent_kcal 0.12 [0.00;5.58] 6.13 [1.51;8.25] 0.72 [0.00;1.68] 0.030 32
## energy_from_saturated_fatty_acids_percent_kcal 12.3 [12.1;13.5] 11.4 [9.93;13.1] 11.4 [10.1;13.7] 0.568 32
## energy_from_monounsaturated_fatty_acids_percent_kcal 12.0 [11.3;12.5] 12.6 [12.0;13.9] 13.1 [12.5;13.5] 0.340 32
## energy_from_polyunsaturated_fatty_acids_percent_kcal 6.41 [6.10;7.50] 7.58 [6.35;8.64] 7.69 [6.17;7.90] 0.474 32
## supp_energy_kcal_dsid 10.0 [5.16;10.4] 0.00 [0.00;2.54] 2.09 [0.00;7.14] 0.042 32
## supp_protein_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.18] 0.00 [0.00;0.00] 0.834 32
## supp_total_fat_g_dsid 0.00 [0.00;0.50] 0.00 [0.00;0.00] 0.00 [0.00;0.71] 0.178 32
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.168 32
## supp_cholesterol_mg_dsid 114 [5.00;536] 0.00 [0.00;425] 0.00 [0.00;0.00] 0.104 32
## supp_carbohydrate_g_dsid 0.00 [0.00;2.57] 0.00 [0.00;0.54] 0.00 [0.00;0.00] 0.315 32
## supp_total_sugars_g_dsid 0.00 [0.00;1.12] 0.00 [0.00;0.05] 0.00 [0.00;0.00] 0.567 32
## supp_dietary_fiber_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.54] 0.00 [0.00;0.00] 0.834 32
## supp_soluble_dietary_fiber_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.36] 0.00 [0.00;0.00] 0.834 32
## supp_total_vitamin_a_activity_iu_dsid 1000 [0.00;2143] 0.00 [0.00;2500] 0.00 [0.00;0.00] 0.438 32
## supp_vitamin_a_rae_mcg_dsid 300 [0.00;643] 0.00 [0.00;750] 0.00 [0.00;0.00] 0.438 32
## supp_beta_carotene_percent_dsid 0.00 [0.00;4.14] 0.00 [0.00;31.8] 0.00 [0.00;0.00] 0.818 32
## supp_lutein_zeaxanthin_mcg_dsid 196 [0.00;262] 0.00 [0.00;62.5] 0.00 [0.00;0.00] 0.171 32
## supp_lycopene_mcg_dsid 0.00 [0.00;0.00] 0.00 [0.00;75.0] 0.00 [0.00;0.00] 0.859 32
## supp_biotin_mcg_dsid 8.57 [0.00;12.9] 4.28 [0.00;30.0] 0.00 [0.00;0.00] 0.376 32
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 7.21 [2.87;21.8] 0.00 [0.00;23.5] 0.00 [0.00;0.00] 0.253 32
## supp_vitamin_e_iu_dsid 10.7 [4.28;32.5] 0.00 [0.00;35.0] 0.00 [0.00;0.00] 0.253 32
## supp_vitamin_k_mcg_dsid 0.00 [0.00;3.57] 0.00 [0.00;26.2] 0.00 [0.00;0.00] 0.818 32
## supp_vitamin_c_mg_dsid 21.4 [8.57;45.0] 30.0 [0.00;72.3] 0.00 [0.00;60.0] 0.974 32
## supp_thiamin_vitamin_b1_mg_dsid 0.00 [0.00;0.22] 0.75 [0.00;1.50] 0.00 [0.00;0.00] 0.195 32
## supp_riboflavin_vitamin_b2_mg_dsid 0.00 [0.00;0.24] 0.85 [0.00;1.70] 0.00 [0.00;0.00] 0.195 32
## supp_niacin_mg_dsid 7.14 [0.00;15.0] 3.57 [0.00;20.0] 0.00 [0.00;0.00] 0.297 32
## supp_vitamin_b6_mg_dsid 0.57 [0.00;2.93] 0.28 [0.00;2.25] 0.00 [0.00;0.00] 0.313 32
## supp_folate_dfe_mcg_dsid 306 [97.1;583] 97.1 [0.00;680] 0.00 [0.00;0.00] 0.209 32
## supp_folic_acid_mcg_dsid 180 [57.1;343] 57.1 [0.00;400] 0.00 [0.00;0.00] 0.209 32
## supp_vitamin_b12_mcg_dsid 1.71 [0.00;10.3] 2.14 [0.00;14.3] 0.00 [0.00;17.9] 0.771 32
## supp_pantothenic_acid_mg_dsid 2.86 [0.00;8.57] 0.78 [0.00;10.0] 0.00 [0.00;0.00] 0.327 32
## supp_vitamin_d_d2_d3_mcg_dsid 20.0 [13.4;25.0] 18.8 [0.60;37.5] 7.14 [0.00;25.0] 0.416 32
## supp_boron_mcg_dsid 21.4 [0.00;129] 0.00 [0.00;93.8] 0.00 [0.00;0.00] 0.425 32
## supp_calcium_mg_dsid 13.3 [0.00;139] 259 [54.8;555] 171 [19.9;336] 0.253 32
## supp_chloride_mg_dsid 0.00 [0.00;10.3] 0.00 [0.00;72.0] 0.00 [0.00;0.00] 0.778 32
## supp_chromium_mcg_dsid 10.0 [0.00;65.4] 0.00 [0.00;37.5] 0.00 [0.00;0.00] 0.231 32
## supp_copper_mg_dsid 0.00 [0.00;0.32] 0.00 [0.00;0.50] 0.00 [0.00;0.00] 0.608 32
## supp_fluoride_mg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## supp_iodine_mcg_dsid 0.00 [0.00;21.4] 0.00 [0.00;150] 0.00 [0.00;0.00] 0.778 32
## supp_iron_mg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.842 32
## supp_magnesium_mg_dsid 0.00 [0.00;7.14] 50.0 [0.00;197] 0.00 [0.00;50.0] 0.197 32
## supp_manganese_mg_dsid 0.00 [0.00;0.33] 0.00 [0.00;2.30] 0.00 [0.00;0.00] 0.778 32
## supp_molybdenum_mcg_dsid 12.9 [0.00;32.1] 0.00 [0.00;45.0] 0.00 [0.00;0.00] 0.522 32
## supp_nickel_mcg_dsid 0.00 [0.00;0.72] 0.00 [0.00;5.00] 0.00 [0.00;0.00] 0.778 32
## supp_phosphorus_mg_dsid 0.00 [0.00;2.86] 0.00 [0.00;20.0] 0.00 [0.00;0.00] 0.778 32
## supp_potassium_mg_dsid 0.00 [0.00;11.4] 10.7 [0.00;80.0] 0.00 [0.00;8.56] 0.601 32
## supp_selenium_mcg_dsid 0.00 [0.00;7.86] 0.00 [0.00;55.0] 0.00 [0.00;0.00] 0.778 32
## supp_silicon_mg_dsid 0.00 [0.00;0.28] 0.00 [0.00;2.00] 0.00 [0.00;0.00] 0.778 32
## supp_sodium_mg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.01] 0.00 [0.00;0.00] 0.381 32
## supp_tin_mcg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.446 32
## supp_vanadium_mcg_dsid 0.00 [0.00;1.43] 0.00 [0.00;10.0] 0.00 [0.00;0.00] 0.778 32
## supp_zinc_mg_dsid 0.00 [0.00;7.07] 0.00 [0.00;11.0] 0.00 [0.00;7.86] 0.866 32
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.00 [0.00;0.09] 0.00 [0.00;0.00] 0.00 [0.00;0.13] 0.185 32
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.00 [0.00;0.06] 0.00 [0.00;0.00] 0.00 [0.00;0.09] 0.185 32
## supp_omega_3_fatty_acids_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.168 32
## supp_inositol_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## supp_choline_mg_dsid 0.00 [0.00;0.01] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.025 32
## total_hei_2015_score 62.0 [56.6;72.9] 69.8 [65.0;73.9] 66.5 [60.6;78.6] 0.371 32
## hei_2015_total_vegetables_component_score 4.48 [3.79;4.79] 5.00 [4.78;5.00] 5.00 [3.49;5.00] 0.300 32
## hei_2015_greens_and_beans_component_score 5.00 [4.30;5.00] 5.00 [4.90;5.00] 4.60 [2.25;5.00] 0.156 32
## hei_2015_total_fruits_component_score 3.57 [1.90;5.00] 5.00 [4.36;5.00] 5.00 [5.00;5.00] 0.123 32
## hei_2015_whole_fruits_component_score 5.00 [3.68;5.00] 5.00 [5.00;5.00] 5.00 [5.00;5.00] 0.024 32
## hei_2015_whole_grains_component_score 1.82 [1.28;4.89] 2.78 [2.06;3.37] 1.93 [1.74;5.06] 0.644 32
## hei_2015_dairy_component_score 9.47 [6.06;9.77] 5.00 [3.36;8.69] 9.07 [5.45;10.0] 0.166 32
## hei_2015_total_protein_foods_component_score 5.00 [4.80;5.00] 5.00 [5.00;5.00] 5.00 [3.37;5.00] 0.034 32
## hei_2015_seafood_and_plant_proteins_component_score 5.00 [4.03;5.00] 5.00 [4.73;5.00] 5.00 [2.96;5.00] 0.720 32
## hei_2015_fatty_acids_component_score 2.05 [1.12;4.44] 4.35 [2.96;5.28] 2.72 [1.53;5.35] 0.369 32
## hei_2015_sodium_component_score 4.35 [3.50;7.21] 4.23 [2.84;4.98] 6.14 [4.72;7.03] 0.096 32
## hei_2015_refined_grains_component_score 10.0 [9.18;10.0] 9.61 [8.91;10.0] 10.0 [8.25;10.0] 0.621 32
## hei_2015_saturated_fats_component_score 4.61 [3.13;4.92] 5.74 [3.66;7.58] 5.78 [2.83;7.32] 0.547 32
## hei_2015_added_sugars_component_score 8.82 [6.23;9.50] 10.0 [9.92;10.0] 9.23 [7.12;10.0] 0.019 32
## hei_2015_density_of_total_vegetables_per_1000_kcal 0.98 [0.84;1.29] 1.38 [1.07;1.79] 1.19 [0.77;1.54] 0.387 32
## hei_2015_density_of_greens_and_beans_per_1000_kcal 0.22 [0.17;0.42] 0.28 [0.22;0.61] 0.18 [0.09;0.29] 0.209 32
## hei_2015_density_of_total_fruits_per_1000_kcal 0.57 [0.30;0.98] 0.97 [0.70;1.68] 1.22 [0.97;1.75] 0.044 32
## hei_2015_density_of_whole_fruits_per_1000_kcal 0.43 [0.30;0.85] 0.86 [0.65;1.32] 1.18 [0.79;1.70] 0.046 32
## hei_2015_density_of_whole_grains_per_1000_kcal 0.27 [0.19;0.74] 0.42 [0.31;0.50] 0.29 [0.26;0.76] 0.651 32
## hei_2015_density_of_dairy_per_1000_kcal 1.23 [0.78;1.58] 0.65 [0.44;1.13] 1.18 [0.71;1.36] 0.215 32
## hei_2015_density_of_total_protein_foods_per_1000_kcal 3.10 [2.62;3.25] 3.06 [2.91;3.64] 2.63 [1.69;3.81] 0.292 32
## hei_2015_density_of_seafood_and_plant_proteins_per_1000_kcal 0.86 [0.64;0.96] 1.25 [0.92;1.39] 1.18 [0.47;1.53] 0.406 32
## hei_2015_fatty_acid_ratio 1.47 [1.34;1.77] 1.77 [1.59;1.88] 1.55 [1.40;1.90] 0.382 32
## hei_2015_density_of_sodium_per_1000_kcal 1.61 [1.35;1.69] 1.62 [1.55;1.74] 1.45 [1.37;1.58] 0.098 32
## hei_2015_density_of_refined_grains_per_1000_kcal 1.50 [1.38;1.88] 1.90 [1.06;2.07] 1.60 [1.29;2.24] 0.993 32
## hei_2015_percent_of_calories_from_saturated_fats 12.3 [12.1;13.5] 11.4 [9.93;13.1] 11.4 [10.1;13.7] 0.568 32
## hei_2015_percent_of_calories_from_added_sugars 8.80 [5.90;13.9] 5.07 [4.21;6.55] 7.99 [6.41;12.1] 0.014 32
## sga_symmpt_score 1.00 [0.00;1.00] 0.00 [0.00;0.00] 4.00 [0.00;8.00] 0.006 32
## ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯Compare groups (Muscle loss)
update(restab, show.n=TRUE)##
## --------Summary descriptives table by 'muscle_loss'---------
##
## __________________________________________________________________________________________________________________________________________________
## maybe no yes p.overall N
## N=7 N=12 N=13
## ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯
## importance_nutr 1.00 [0.00;2.50] 2.00 [1.50;2.00] 3.00 [2.00;3.00] 0.050 32
## cancer_type 2.00 [1.50;2.00] 2.00 [1.00;2.00] 2.00 [1.00;2.00] 0.799 32
## age 69.0 [49.0;71.5] 63.0 [56.2;68.0] 62.0 [51.0;67.0] 0.956 32
## sex 1.00 [1.00;1.50] 1.00 [1.00;1.00] 1.00 [1.00;1.00] 0.494 32
## stage 1.00 [1.00;2.50] 1.00 [1.00;2.00] 1.00 [1.00;2.00] 0.966 28
## wt_chg_6mo_amt_lbs 5.00 [0.00;10.0] 0.00 [0.00;0.00] -5.00 [-12.70;0.00] 0.136 32
## sga_appetite 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.050 32
## sga_diarrhea 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.221 32
## sga_taste 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.348 32
## sga_nausea 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.227 32
## sga_dry 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.482 32
## sga_full 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.050 32
## sga_vomit 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.221 32
## sga_mouth 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.381 32
## sga_tired 2.00 [1.50;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.031 32
## sga_constipation 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.221 32
## sga_smell 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.096 32
## sga_pain 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.747 32
## sga_other 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.457 32
## tx_chemo 2.00 [1.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.390 32
## tx_radiation 1.00 [1.00;1.00] 2.00 [1.00;2.00] 1.00 [1.00;2.00] 0.081 32
## tx_surgery 1.00 [1.00;1.00] 1.00 [1.00;1.00] 1.00 [1.00;1.00] 0.096 32
## tx_hormone 2.00 [1.00;2.00] 2.00 [2.00;2.00] 2.00 [1.00;2.00] 0.390 32
## tx_other 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] . 32
## tx_unsure 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] . 32
## tx_surveillance 2.00 [1.50;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] 0.358 32
## tx_none 2.00 [2.00;2.00] 2.00 [2.00;2.00] 2.00 [2.00;2.00] . 32
## marital 3.00 [2.50;3.00] 3.00 [3.00;3.25] 3.00 [3.00;4.00] 0.220 32
## education 3.00 [2.00;3.50] 4.00 [2.00;5.00] 4.00 [3.00;4.00] 0.474 32
## income 1.00 [0.50;1.50] 1.00 [1.00;1.00] 3.00 [1.25;3.00] 0.289 22
## occupation 1.00 [0.00;2.75] 0.00 [0.00;2.00] 1.00 [0.00;1.00] 0.804 27
## born_canada 1.00 [1.00;1.00] 1.00 [1.00;1.00] 1.00 [1.00;1.00] 0.861 32
## ethnic 1.00 [1.00;1.00] 1.00 [1.00;1.00] 1.00 [1.00;1.00] . 32
## gram_weight_g 3358 [3031;4502] 2958 [2277;3634] 3622 [3222;4763] 0.381 32
## energy_kcal 1766 [1338;1916] 1475 [1264;1582] 1531 [1078;2305] 0.690 32
## gluten_g 4.41 [4.28;5.57] 4.44 [3.00;5.54] 6.13 [2.33;6.53] 0.962 32
## alcohol_g 0.28 [0.01;12.6] 11.3 [3.61;20.7] 1.50 [0.00;3.28] 0.024 32
## protein_g 62.3 [49.2;94.1] 61.3 [47.7;65.8] 62.7 [46.4;86.2] 0.885 32
## nitrogen_g 10.0 [7.72;14.8] 9.91 [7.74;10.5] 9.94 [7.45;13.7] 0.886 32
## total_protein_g 62.2 [48.0;92.0] 61.0 [47.4;65.1] 61.4 [46.5;84.2] 0.877 32
## animal_protein_g 42.8 [34.1;67.5] 37.8 [28.0;43.2] 36.5 [27.1;54.5] 0.638 32
## vegetable_protein_g 19.4 [14.2;24.5] 19.9 [17.4;26.2] 21.9 [13.4;29.7] 0.889 32
## total_fat_g 66.7 [52.6;78.2] 60.4 [53.1;65.7] 58.6 [39.6;98.3] 0.789 32
## solid_fat_g 34.3 [28.3;41.2] 30.4 [21.9;30.8] 28.1 [21.8;50.2] 0.362 32
## total_saturated_fatty_acids_g 25.1 [20.3;27.2] 19.6 [15.3;21.6] 18.7 [14.1;35.8] 0.495 32
## total_monounsaturated_fatty_acids_g 21.7 [17.6;27.7] 20.3 [18.8;26.3] 22.3 [17.4;34.4] 0.906 32
## total_polyunsaturated_fatty_acids_g 12.3 [9.69;16.0] 12.3 [10.0;14.8] 13.1 [8.05;21.1] 0.803 32
## total_saturated_fatty_acids_g_2 25.3 [20.8;27.2] 19.3 [15.2;21.8] 18.9 [14.4;35.8] 0.393 32
## total_monounsaturated_fatty_acids_g_2 24.0 [18.4;27.1] 21.8 [19.2;28.3] 22.6 [18.0;35.6] 0.927 32
## total_polyunsaturated_fatty_acids_g_2 12.2 [8.57;14.6] 11.8 [9.16;13.5] 12.5 [7.76;17.8] 0.782 32
## polyunsaturated_to_saturated_fatty_acid_ratio 20.5 [13.5;26.6] 21.8 [19.2;31.3] 26.1 [24.0;31.8] 0.248 32
## cholesterol_mg 251 [169;371] 194 [171;223] 177 [122;278] 0.481 32
## cholesterol_to_saturated_fatty_acid_index 39.3 [29.0;46.3] 29.9 [26.2;32.3] 27.1 [23.9;49.4] 0.497 32
## carbohydrate_g 196 [158;225] 156 [145;177] 200 [152;296] 0.363 32
## total_sugars_g 94.2 [85.1;103] 64.4 [55.5;76.1] 95.0 [77.2;130] 0.078 32
## total_sugars_g_2 92.9 [84.9;105] 64.4 [54.9;75.0] 94.8 [76.5;129] 0.060 32
## added_sugars_g 54.0 [30.4;58.0] 19.9 [18.0;24.9] 35.9 [32.2;56.1] 0.019 32
## added_sugars_by_total_sugars_g 48.0 [28.1;51.3] 17.0 [16.0;22.2] 31.5 [28.0;52.1] 0.024 32
## available_carbohydrate_g 178 [143;209] 136 [128;143] 178 [132;270] 0.297 32
## glycemic_index_glucose_reference 770 [519;807] 615 [501;733] 605 [507;782] 0.747 32
## glycemic_index_bread_reference 1101 [742;1154] 879 [717;1048] 865 [725;1119] 0.747 32
## glycemic_load_glucose_reference 103 [76.7;129] 72.6 [70.8;76.3] 96.0 [70.6;151] 0.276 32
## glycemic_load_bread_reference 147 [110;185] 104 [101;109] 137 [101;216] 0.276 32
## fructose_g 16.2 [9.60;20.1] 15.5 [13.4;20.3] 20.2 [14.7;25.6] 0.377 32
## galactose_g 0.27 [0.21;0.39] 0.24 [0.16;0.35] 0.51 [0.14;0.71] 0.477 32
## glucose_g 16.9 [10.7;19.9] 14.2 [12.2;18.4] 17.9 [13.3;26.6] 0.404 32
## lactose_g 20.0 [12.2;23.7] 7.68 [3.76;13.7] 8.50 [7.57;29.4] 0.204 32
## maltose_g 1.56 [1.07;2.08] 1.27 [1.02;1.60] 1.56 [1.08;2.53] 0.716 32
## sucrose_g 40.2 [28.2;44.0] 22.0 [18.4;24.6] 34.2 [26.8;53.3] 0.030 32
## starch_g 57.1 [47.6;70.5] 57.8 [49.3;64.8] 67.4 [38.6;114] 0.975 32
## dietary_fiber_g 14.1 [10.3;19.9] 18.1 [13.5;27.3] 21.1 [14.9;21.9] 0.290 32
## total_dietary_fiber_g 17.0 [13.5;22.0] 18.8 [16.1;27.7] 22.5 [17.5;24.3] 0.380 32
## soluble_dietary_fiber_g 7.50 [5.62;8.14] 7.14 [6.48;8.97] 6.95 [5.40;8.86] 0.829 32
## insoluble_dietary_fiber_g 9.21 [7.34;13.8] 12.9 [9.58;20.1] 15.4 [9.92;15.9] 0.197 32
## pectins_g 2.51 [1.61;3.52] 3.62 [2.32;4.63] 3.28 [2.69;4.10] 0.349 32
## retinol_mcg 461 [367;537] 323 [257;485] 420 [201;661] 0.733 32
## total_vitamin_a_activity_international_units_iu 8497 [3384;11745] 9743 [6865;14698] 8674 [7709;9908] 0.729 32
## vitamin_a_retinol_activity_mcg 798 [517;990] 795 [538;1149] 783 [541;1118] 0.933 32
## total_vitamin_a_activity_re_mcg 1148 [627;1475] 1247 [908;1870] 1113 [909;1454] 0.776 32
## beta_carotene_mcg 3544 [1114;5543] 4061 [2694;6618] 3627 [3122;4279] 0.681 32
## beta_carotene_mcg_2 4202 [1316;6143] 5038 [3453;7620] 4432 [3445;4901] 0.617 32
## alpha_carotene_mcg 364 [255;1357] 947 [281;1035] 1000 [399;1161] 0.680 32
## beta_cryptoxanthin_mcg 53.0 [38.9;138] 128 [99.4;184] 97.8 [81.4;117] 0.265 32
## lutein_zeaxanthin_mcg 1823 [965;4048] 3142 [1534;7581] 1925 [1142;3320] 0.349 32
## lycopene_mcg 2950 [2259;4384] 3650 [2925;4174] 2955 [2549;4106] 0.783 32
## vitamin_e_as_alpha_tocopherol_mg 7.23 [4.76;8.41] 7.00 [5.82;11.5] 8.89 [7.49;10.4] 0.512 32
## vitamin_e_alpha_tocopherol_mg 7.36 [5.19;7.94] 7.14 [6.15;11.4] 8.83 [7.22;12.5] 0.492 32
## added_alpha_tocopherol_mg 0.14 [0.00;0.22] 0.10 [0.03;0.20] 0.45 [0.09;1.26] 0.227 32
## total_alpha_tocopherol_mg 8.79 [6.68;9.39] 8.50 [7.26;14.0] 10.3 [8.66;14.6] 0.526 32
## beta_tocopherol_mg 0.44 [0.30;0.64] 0.30 [0.26;0.36] 0.50 [0.38;0.78] 0.132 32
## gamma_tocopherol_mg 10.8 [7.18;11.4] 9.78 [6.30;10.6] 10.0 [7.66;15.8] 0.653 32
## delta_tocopherol_mg 2.04 [1.36;2.38] 1.88 [1.42;2.37] 2.01 [1.53;3.24] 0.891 32
## vitamin_e_international_units_iu 11.0 [7.91;11.8] 10.7 [9.21;17.8] 13.2 [10.8;19.4] 0.444 32
## natural_alpha_tocopherol_rrr_alpha_tocopherol_or_d_alpha_tocopherol_mg 7.32 [4.88;7.85] 7.02 [5.94;9.46] 8.26 [7.03;9.81] 0.477 32
## synthetic_alpha_tocopherol_all_rac_alpha_tocopherol_or_dl_alpha_tocopherol_mg 0.16 [0.06;0.80] 0.30 [0.04;0.65] 0.22 [0.09;0.63] 0.880 32
## vitamin_k_mcg 133 [69.8;241] 174 [106;399] 103 [79.3;244] 0.527 32
## vitamin_c_mg 103 [35.6;127] 121 [84.7;151] 82.5 [53.0;119] 0.252 32
## thiamin_vitamin_b1_mg 1.21 [0.93;1.43] 1.13 [0.98;1.41] 1.16 [0.96;1.67] 0.934 32
## riboflavin_vitamin_b2_mg 2.03 [1.76;2.68] 1.76 [1.52;2.38] 2.23 [1.13;2.91] 0.799 32
## niacin_mg 18.6 [12.9;23.6] 17.4 [14.2;21.3] 17.1 [13.8;21.2] 0.959 32
## niacin_mg_2 30.2 [21.9;39.7] 28.6 [24.1;33.8] 29.1 [23.0;34.5] 0.957 32
## vitamin_b6_mg 1.57 [1.11;2.16] 1.88 [1.44;2.24] 1.59 [1.33;2.20] 0.758 32
## total_folate_mcg 379 [250;407] 372 [264;511] 384 [264;441] 0.660 32
## folate_dietary_folate_mcg 434 [324;488] 443 [324;608] 437 [307;556] 0.748 32
## food_folate_mcg 238 [145;305] 242 [197;351] 269 [172;322] 0.776 32
## folic_acid_mcg 80.4 [64.7;156] 83.8 [52.9;105] 101 [38.8;152] 0.912 32
## vitamin_b12_mcg 4.26 [3.56;5.80] 3.37 [2.66;5.15] 4.17 [2.07;7.54] 0.816 32
## added_vitamin_b12_mcg 0.20 [0.01;0.71] 0.21 [0.07;0.54] 0.25 [0.16;1.00] 0.728 32
## pantothenic_acid_mg 5.66 [4.76;7.31] 5.63 [4.60;6.48] 5.04 [3.44;6.91] 0.870 32
## vitamin_d_d2_d3_mcg 5.52 [4.46;5.94] 3.20 [2.30;5.75] 4.02 [2.01;6.66] 0.625 32
## vitamin_d_calciferol_mcg 5.88 [4.78;6.40] 3.54 [2.57;5.26] 3.98 [1.88;7.01] 0.569 32
## vitamin_d_ergocalciferol_mcg 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.01] 0.300 32
## vitamin_d_cholecalciferol_mcg 5.88 [4.78;6.40] 3.54 [2.50;5.26] 3.64 [1.88;7.01] 0.584 32
## calcium_mg 1084 [885;1244] 817 [519;978] 880 [554;1644] 0.617 32
## phosphorus_mg 1132 [958;1623] 986 [897;1199] 1096 [699;1824] 0.820 32
## magnesium_mg 291 [266;311] 308 [234;326] 303 [220;400] 0.969 32
## iron_mg 10.6 [8.02;12.6] 9.33 [8.28;13.4] 10.4 [7.79;14.6] 0.986 32
## zinc_mg 8.28 [7.62;12.1] 8.61 [7.67;9.54] 8.07 [5.47;12.5] 0.964 32
## copper_mg 1.07 [0.96;1.23] 1.32 [0.93;1.48] 1.28 [1.18;1.50] 0.519 32
## selenium_mcg 79.3 [62.3;113] 71.7 [65.6;91.1] 76.8 [54.2;106] 0.638 32
## sodium_mg 2581 [1848;3236] 2538 [1968;2800] 2230 [1570;3048] 0.942 32
## potassium_mg 3004 [2268;3247] 2715 [2330;3823] 2890 [2077;3443] 0.968 32
## manganese_mg 2.76 [2.10;2.96] 3.20 [2.38;4.61] 3.24 [2.52;4.80] 0.301 32
## sfa_4_0_butanoic_g 0.53 [0.52;0.67] 0.51 [0.28;0.62] 0.42 [0.23;1.06] 0.583 32
## sfa_6_0_hexanoic_g 0.31 [0.30;0.41] 0.28 [0.15;0.32] 0.25 [0.13;0.57] 0.461 32
## sfa_8_0_octanoic_g 0.26 [0.22;0.30] 0.20 [0.12;0.24] 0.20 [0.15;0.43] 0.346 32
## sfa_10_0_decanoic_g 0.50 [0.46;0.60] 0.42 [0.26;0.52] 0.41 [0.31;0.89] 0.387 32
## sfa_12_0_dodecanoic_g 0.67 [0.62;0.88] 0.52 [0.36;0.63] 0.70 [0.44;1.15] 0.135 32
## sfa_14_0_tetradecanoic_g 2.08 [1.97;2.56] 1.92 [1.20;2.19] 1.61 [1.19;3.52] 0.564 32
## sfa_16_0_hexadecanoic_g 12.7 [10.4;14.2] 10.2 [9.28;11.2] 9.98 [7.46;17.8] 0.687 32
## sfa_17_0_margaric_acid_g 0.15 [0.12;0.16] 0.11 [0.09;0.12] 0.09 [0.08;0.17] 0.274 32
## sfa_18_0_octadecanoic_g 6.02 [4.68;6.51] 4.50 [3.30;4.95] 4.64 [3.30;7.50] 0.369 32
## sfa_20_0_arachidic_acid_g 0.10 [0.09;0.14] 0.12 [0.08;0.14] 0.15 [0.08;0.23] 0.791 32
## sfa_22_0_behenic_acid_g 0.09 [0.06;0.11] 0.12 [0.06;0.18] 0.14 [0.04;0.25] 0.934 32
## mfa_16_1_hexadecenoic_g 1.05 [0.72;1.07] 0.90 [0.82;1.06] 0.70 [0.66;1.20] 0.754 32
## mfa_18_1_octadecenoic_g 19.6 [16.1;25.5] 18.6 [17.1;24.0] 20.9 [16.8;32.5] 0.914 32
## mfa_20_1_eicosenoic_g 0.20 [0.15;0.28] 0.20 [0.19;0.22] 0.24 [0.11;0.32] 0.824 32
## mfa_22_1_docosenoic_g 0.01 [0.01;0.01] 0.00 [0.00;0.01] 0.01 [0.01;0.01] 0.449 32
## mfa_14_1_myristoleic_g 0.16 [0.15;0.17] 0.11 [0.10;0.13] 0.11 [0.08;0.19] 0.325 32
## pfa_18_2_octadecadienoic_g 11.0 [8.30;13.7] 10.6 [8.71;13.0] 11.7 [6.83;18.1] 0.838 32
## pfa_18_3_octadecatrienoic_g 1.14 [0.84;1.39] 1.23 [0.96;1.53] 1.34 [0.95;1.77] 0.783 32
## pfa_18_3_n3_alpha_linolenic_g 0.80 [0.73;1.31] 1.12 [0.82;1.44] 1.22 [0.80;1.52] 0.703 32
## pfa_18_4_octadecatetraenoic_g 0.01 [0.00;0.01] 0.00 [0.00;0.01] 0.01 [0.00;0.01] 0.643 32
## pfa_20_4_eicosatetraenoic_g 0.10 [0.08;0.18] 0.09 [0.07;0.12] 0.08 [0.04;0.12] 0.539 32
## pfa_20_5_eicosapentaenoic_g 0.02 [0.00;0.04] 0.02 [0.01;0.03] 0.02 [0.01;0.03] 0.965 32
## pfa_22_5_docosapentaenoic_g 0.01 [0.00;0.02] 0.01 [0.01;0.02] 0.01 [0.01;0.02] 0.847 32
## pfa_22_6_docosahexaenoic_g 0.04 [0.04;0.08] 0.05 [0.03;0.05] 0.05 [0.03;0.09] 0.968 32
## trans_18_1_trans_octadecenoic_acid_elaidic_acid_g 2.33 [1.87;2.74] 1.95 [1.57;2.38] 1.96 [1.59;4.02] 0.683 32
## trans_18_2_trans_octadecadienoic_acid_linolelaidic_acid_incl_c_t_t_c_t_t_g 0.34 [0.26;0.44] 0.29 [0.22;0.33] 0.27 [0.22;0.54] 0.528 32
## trans_16_1_trans_hexadecenoic_acid_g 0.06 [0.04;0.06] 0.04 [0.04;0.06] 0.05 [0.03;0.07] 0.675 32
## total_trans_fatty_acitds_g 2.88 [2.19;3.20] 2.31 [1.85;2.77] 2.27 [1.88;4.64] 0.617 32
## omega_3_fatty_acids_g 0.87 [0.76;1.56] 1.25 [0.88;1.54] 1.28 [0.87;1.72] 0.818 32
## cla_18_2_linoleic_g 0.11 [0.10;0.15] 0.10 [0.08;0.12] 0.08 [0.07;0.17] 0.651 32
## cla_cis9_trans11_g 0.09 [0.09;0.12] 0.08 [0.07;0.10] 0.07 [0.06;0.15] 0.611 32
## cla_trans10_cis12_g 0.02 [0.01;0.03] 0.02 [0.01;0.02] 0.01 [0.01;0.03] 0.693 32
## tryptophan_g 0.70 [0.58;1.06] 0.68 [0.56;0.75] 0.73 [0.53;1.02] 0.802 32
## threonine_g 2.42 [1.85;3.68] 2.26 [1.74;2.51] 2.52 [1.85;3.29] 0.851 32
## isoleucine_g 2.73 [2.17;4.22] 2.58 [1.97;2.88] 2.72 [2.09;3.92] 0.835 32
## leucine_g 4.71 [3.86;7.24] 4.51 [3.45;5.03] 4.83 [3.55;7.14] 0.813 32
## lysine_g 4.23 [3.24;6.51] 3.94 [2.92;4.46] 3.91 [2.99;5.40] 0.901 32
## methionine_g 1.42 [1.07;2.14] 1.30 [0.98;1.46] 1.30 [1.05;1.83] 0.868 32
## cystine_g 0.78 [0.54;1.14] 0.69 [0.60;0.82] 0.78 [0.60;0.99] 0.782 32
## phenylalanine_g 2.65 [2.19;4.08] 2.60 [2.26;2.87] 2.61 [1.97;4.11] 0.904 32
## tyrosine_g 2.12 [1.85;3.30] 2.00 [1.47;2.29] 2.05 [1.61;3.37] 0.791 32
## valine_g 3.10 [2.60;4.86] 2.94 [2.38;3.35] 3.08 [2.36;4.79] 0.835 32
## arginine_g 3.30 [2.26;4.70] 3.28 [2.74;3.69] 3.33 [2.53;3.96] 0.968 32
## histidine_g 1.68 [1.33;2.57] 1.67 [1.26;1.83] 1.73 [1.29;2.31] 0.922 32
## alanine_g 2.99 [2.05;4.34] 2.87 [2.21;3.04] 2.79 [2.29;3.32] 0.849 32
## aspartic_acid_g 5.84 [4.23;8.59] 5.62 [4.58;6.07] 5.85 [4.45;7.34] 0.954 32
## glutamin_acid_g 11.4 [9.55;17.2] 11.4 [8.85;12.5] 11.5 [7.94;17.6] 0.852 32
## glycine_g 2.66 [1.71;3.64] 2.53 [2.06;2.78] 2.45 [1.96;2.96] 0.789 32
## proline_g 3.90 [3.50;5.94] 3.82 [2.93;4.11] 3.79 [2.56;6.39] 0.820 32
## serine_g 2.68 [2.32;4.35] 2.58 [2.36;3.04] 2.74 [1.98;4.35] 0.888 32
## daidzein_mg 0.39 [0.28;0.52] 0.38 [0.24;0.65] 0.36 [0.18;0.57] 0.928 32
## genistein_mg 0.31 [0.23;0.67] 0.36 [0.27;0.66] 0.39 [0.18;0.58] 0.991 32
## glycitein_mg 0.03 [0.02;0.10] 0.04 [0.03;0.09] 0.05 [0.02;0.08] 0.931 32
## coumestrol_mg 0.17 [0.10;0.21] 0.11 [0.06;0.21] 0.08 [0.05;0.16] 0.343 32
## biochanin_a_mg 0.07 [0.06;0.10] 0.12 [0.09;0.23] 0.12 [0.04;0.23] 0.363 32
## formononetin_mg 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.01] 0.351 32
## erythritol_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.897 32
## inositol_g 0.40 [0.30;0.46] 0.50 [0.35;0.59] 0.29 [0.28;0.40] 0.118 32
## isomalt_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## lactitol_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## maltitol_g 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.472 32
## mannitol_g 0.20 [0.13;0.33] 0.32 [0.19;0.56] 0.35 [0.32;0.54] 0.183 32
## pinitol_g 0.01 [0.00;0.01] 0.00 [0.00;0.01] 0.01 [0.00;0.01] 0.932 32
## sorbitol_g 0.52 [0.36;0.55] 0.52 [0.38;0.69] 0.82 [0.44;1.38] 0.162 32
## xylitol_g 0.03 [0.02;0.03] 0.03 [0.02;0.04] 0.03 [0.02;0.04] 0.866 32
## caffeine_mg 211 [160;332] 194 [133;333] 184 [143;246] 0.900 32
## theobromine_mg 16.9 [9.93;23.1] 14.9 [11.7;19.3] 23.7 [5.43;39.0] 0.443 32
## moisture_g 2886 [2650;4110] 2702 [1907;3256] 3259 [2964;4285] 0.344 32
## water_g 2927 [2667;4136] 2713 [1922;3271] 3280 [2984;4307] 0.366 32
## total_choline_mg 280 [234;438] 271 [242;303] 267 [216;283] 0.671 32
## aspartame_mg 4.78 [1.58;9.19] 1.89 [0.82;8.99] 4.97 [1.02;7.44] 0.881 32
## saccharin_mg 0.00 [0.00;0.62] 0.00 [0.00;0.16] 0.00 [0.00;0.45] 0.847 32
## phytic_acid_mg 424 [336;489] 470 [360;678] 516 [334;787] 0.591 32
## oxalic_acid_mg 130 [97.5;281] 258 [127;407] 192 [119;264] 0.521 32
## x3_methylhistidine_mg 12.3 [8.11;15.6] 10.5 [9.84;14.4] 9.31 [3.45;12.2] 0.381 32
## sucrose_polyester_g 0.01 [0.00;0.01] 0.00 [0.00;0.01] 0.00 [0.00;0.01] 0.808 32
## ash_g 16.8 [15.6;21.4] 16.7 [14.0;18.3] 16.1 [13.2;20.3] 0.891 32
## acesulfame_potassium_mg 0.20 [0.04;0.62] 0.06 [0.00;0.11] 0.10 [0.00;0.29] 0.469 32
## sucralose_mg 0.66 [0.28;1.65] 0.17 [0.00;0.91] 2.12 [0.02;3.46] 0.226 32
## tagatose_g 1.11 [0.47;1.58] 0.67 [0.47;0.84] 1.26 [0.49;2.58] 0.333 32
## betaine_mg 89.6 [68.6;112] 98.4 [77.8;140] 108 [54.2;124] 0.686 32
## citrus_melon_berry_fruit_cups 0.12 [0.11;0.43] 0.40 [0.24;0.76] 0.33 [0.21;0.53] 0.302 32
## other_fruit_cups 0.64 [0.27;1.06] 0.86 [0.64;1.33] 1.35 [1.08;1.78] 0.051 32
## fruits_cups 0.88 [0.39;1.56] 1.34 [0.89;2.10] 1.77 [1.33;2.33] 0.101 32
## juice_fruit_cups 0.07 [0.03;0.24] 0.01 [0.00;0.32] 0.07 [0.00;0.30] 0.882 32
## total_fruit_cups 1.17 [0.40;1.83] 1.48 [1.21;2.16] 2.18 [1.49;2.51] 0.109 32
## dark_green_vegetable_cups 0.26 [0.14;0.73] 0.31 [0.18;0.85] 0.17 [0.12;0.37] 0.445 32
## red_orange_tomato_vegetable_cups 0.19 [0.12;0.24] 0.24 [0.18;0.30] 0.23 [0.19;0.35] 0.333 32
## red_orange_other_vegetable_cups 0.07 [0.05;0.27] 0.21 [0.07;0.22] 0.20 [0.11;0.25] 0.733 32
## total_red_orange_vegetable_cups 0.26 [0.17;0.52] 0.48 [0.32;0.60] 0.46 [0.35;0.54] 0.466 32
## white_potato_starchy_vegetable_cups 0.31 [0.28;0.46] 0.36 [0.19;0.41] 0.28 [0.11;0.54] 0.719 32
## other_starchy_vegetable_cups 0.07 [0.05;0.10] 0.11 [0.05;0.16] 0.11 [0.05;0.19] 0.443 32
## total_starchy_vegetable_cups 0.40 [0.36;0.55] 0.46 [0.23;0.60] 0.43 [0.27;0.71] 0.947 32
## other_vegetable_cups 0.62 [0.23;0.76] 0.60 [0.31;0.92] 0.41 [0.24;0.67] 0.541 32
## total_vegetable_cups 1.98 [1.16;2.25] 2.07 [1.52;2.63] 1.69 [1.39;2.42] 0.681 32
## legumes_vegetable_cups 0.04 [0.03;0.04] 0.08 [0.03;0.20] 0.05 [0.02;0.09] 0.519 32
## whole_grain_oz 0.56 [0.36;0.91] 0.57 [0.44;0.81] 0.46 [0.38;0.90] 0.910 32
## refined_grain_oz 2.47 [1.94;3.30] 2.56 [1.60;3.05] 2.64 [1.06;4.41] 0.932 32
## total_number_of_grain_oz 3.56 [2.66;3.65] 3.13 [2.25;4.00] 3.66 [1.45;4.94] 0.956 32
## meat_from_beef_pork_veal_lamb_and_game_protein_foods_oz 1.16 [0.97;1.45] 1.14 [0.65;1.28] 0.82 [0.27;1.40] 0.533 32
## cured_meat_protein_foods_oz 0.36 [0.25;0.54] 0.43 [0.28;0.60] 0.18 [0.11;0.54] 0.495 32
## meat_from_organ_meat_protein_foods_oz 0.00 [0.00;0.01] 0.00 [0.00;0.02] 0.00 [0.00;0.00] 0.579 32
## poultry_protein_foods_oz 1.22 [0.38;1.58] 0.82 [0.32;1.39] 0.36 [0.20;0.64] 0.435 32
## seafood_high_in_omega_3_protein_foods_oz 0.07 [0.03;0.35] 0.12 [0.06;0.27] 0.28 [0.03;0.32] 0.886 32
## seafood_low_in_omega_3_protein_foods_oz 0.28 [0.05;0.43] 0.15 [0.09;0.47] 0.13 [0.09;0.23] 0.864 32
## seafood_oz 0.57 [0.22;0.69] 0.37 [0.25;0.70] 0.37 [0.24;0.45] 0.934 32
## total_meat_poultry_seafood_protein_foods_oz 3.53 [2.34;3.99] 2.82 [2.46;3.81] 2.34 [0.97;3.28] 0.516 32
## eggs_protein_foods_oz 0.46 [0.34;0.97] 0.32 [0.17;0.36] 0.32 [0.16;0.57] 0.252 32
## meat_poultry_and_eggs_oz 3.40 [2.21;4.38] 2.71 [2.58;3.54] 2.42 [0.94;3.53] 0.573 32
## soy_products_protein_foods_oz 0.01 [0.01;0.04] 0.01 [0.01;0.02] 0.01 [0.00;0.05] 0.850 32
## nuts_and_seeds_protein_foods_oz 0.29 [0.26;0.59] 0.93 [0.37;1.07] 0.63 [0.23;1.45] 0.660 32
## legumes_protein_foods_oz 0.14 [0.12;0.18] 0.32 [0.10;0.80] 0.18 [0.08;0.37] 0.510 32
## nuts_seeds_soy_and_legumes_oz 0.57 [0.38;1.08] 1.28 [0.61;1.77] 0.96 [0.35;2.04] 0.672 32
## total_protein_foods_oz 4.59 [3.35;5.98] 4.08 [3.36;4.89] 4.01 [2.68;5.07] 0.735 32
## milk_cups 0.85 [0.52;1.77] 0.33 [0.21;0.90] 0.51 [0.14;1.90] 0.593 32
## yogurt_cups 0.04 [0.04;0.24] 0.04 [0.00;0.15] 0.26 [0.04;0.43] 0.063 32
## cheese_cups 0.46 [0.42;0.75] 0.60 [0.18;0.78] 0.41 [0.37;0.67] 0.914 32
## total_dairy_cups 2.19 [1.55;2.40] 0.92 [0.65;1.66] 1.19 [0.67;3.10] 0.244 32
## oil_g 14.4 [11.7;19.4] 18.5 [13.5;25.0] 21.7 [10.8;25.0] 0.813 32
## solid_fat_g_2 30.9 [26.3;37.9] 27.0 [19.7;28.4] 27.2 [19.5;46.7] 0.413 32
## added_sugars_tsp 10.8 [7.06;12.2] 4.41 [4.00;5.96] 7.23 [6.45;12.7] 0.037 32
## alcohol_drinks 0.02 [0.00;0.90] 0.81 [0.26;1.48] 0.11 [0.00;0.24] 0.027 32
## energy_from_fat_percent_kcal 34.9 [33.4;36.6] 35.4 [33.5;38.2] 35.4 [32.7;38.4] 0.899 32
## energy_from_carbohydrates_percent_kcal 48.3 [41.2;49.1] 44.5 [41.5;48.5] 51.6 [46.9;52.8] 0.051 32
## energy_from_protein_percent_kcal 15.5 [14.0;18.9] 16.1 [15.0;17.7] 17.0 [13.1;19.8] 0.953 32
## energy_from_alcohol_percent_kcal 0.12 [0.00;5.58] 6.13 [1.51;8.25] 0.72 [0.00;1.68] 0.030 32
## energy_from_saturated_fatty_acids_percent_kcal 12.3 [12.1;13.5] 11.4 [9.93;13.1] 11.4 [10.1;13.7] 0.568 32
## energy_from_monounsaturated_fatty_acids_percent_kcal 12.0 [11.3;12.5] 12.6 [12.0;13.9] 13.1 [12.5;13.5] 0.340 32
## energy_from_polyunsaturated_fatty_acids_percent_kcal 6.41 [6.10;7.50] 7.58 [6.35;8.64] 7.69 [6.17;7.90] 0.474 32
## supp_energy_kcal_dsid 10.0 [5.16;10.4] 0.00 [0.00;2.54] 2.09 [0.00;7.14] 0.042 32
## supp_protein_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.18] 0.00 [0.00;0.00] 0.834 32
## supp_total_fat_g_dsid 0.00 [0.00;0.50] 0.00 [0.00;0.00] 0.00 [0.00;0.71] 0.178 32
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.168 32
## supp_cholesterol_mg_dsid 114 [5.00;536] 0.00 [0.00;425] 0.00 [0.00;0.00] 0.104 32
## supp_carbohydrate_g_dsid 0.00 [0.00;2.57] 0.00 [0.00;0.54] 0.00 [0.00;0.00] 0.315 32
## supp_total_sugars_g_dsid 0.00 [0.00;1.12] 0.00 [0.00;0.05] 0.00 [0.00;0.00] 0.567 32
## supp_dietary_fiber_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.54] 0.00 [0.00;0.00] 0.834 32
## supp_soluble_dietary_fiber_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.36] 0.00 [0.00;0.00] 0.834 32
## supp_total_vitamin_a_activity_iu_dsid 1000 [0.00;2143] 0.00 [0.00;2500] 0.00 [0.00;0.00] 0.438 32
## supp_vitamin_a_rae_mcg_dsid 300 [0.00;643] 0.00 [0.00;750] 0.00 [0.00;0.00] 0.438 32
## supp_beta_carotene_percent_dsid 0.00 [0.00;4.14] 0.00 [0.00;31.8] 0.00 [0.00;0.00] 0.818 32
## supp_lutein_zeaxanthin_mcg_dsid 196 [0.00;262] 0.00 [0.00;62.5] 0.00 [0.00;0.00] 0.171 32
## supp_lycopene_mcg_dsid 0.00 [0.00;0.00] 0.00 [0.00;75.0] 0.00 [0.00;0.00] 0.859 32
## supp_biotin_mcg_dsid 8.57 [0.00;12.9] 4.28 [0.00;30.0] 0.00 [0.00;0.00] 0.376 32
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 7.21 [2.87;21.8] 0.00 [0.00;23.5] 0.00 [0.00;0.00] 0.253 32
## supp_vitamin_e_iu_dsid 10.7 [4.28;32.5] 0.00 [0.00;35.0] 0.00 [0.00;0.00] 0.253 32
## supp_vitamin_k_mcg_dsid 0.00 [0.00;3.57] 0.00 [0.00;26.2] 0.00 [0.00;0.00] 0.818 32
## supp_vitamin_c_mg_dsid 21.4 [8.57;45.0] 30.0 [0.00;72.3] 0.00 [0.00;60.0] 0.974 32
## supp_thiamin_vitamin_b1_mg_dsid 0.00 [0.00;0.22] 0.75 [0.00;1.50] 0.00 [0.00;0.00] 0.195 32
## supp_riboflavin_vitamin_b2_mg_dsid 0.00 [0.00;0.24] 0.85 [0.00;1.70] 0.00 [0.00;0.00] 0.195 32
## supp_niacin_mg_dsid 7.14 [0.00;15.0] 3.57 [0.00;20.0] 0.00 [0.00;0.00] 0.297 32
## supp_vitamin_b6_mg_dsid 0.57 [0.00;2.93] 0.28 [0.00;2.25] 0.00 [0.00;0.00] 0.313 32
## supp_folate_dfe_mcg_dsid 306 [97.1;583] 97.1 [0.00;680] 0.00 [0.00;0.00] 0.209 32
## supp_folic_acid_mcg_dsid 180 [57.1;343] 57.1 [0.00;400] 0.00 [0.00;0.00] 0.209 32
## supp_vitamin_b12_mcg_dsid 1.71 [0.00;10.3] 2.14 [0.00;14.3] 0.00 [0.00;17.9] 0.771 32
## supp_pantothenic_acid_mg_dsid 2.86 [0.00;8.57] 0.78 [0.00;10.0] 0.00 [0.00;0.00] 0.327 32
## supp_vitamin_d_d2_d3_mcg_dsid 20.0 [13.4;25.0] 18.8 [0.60;37.5] 7.14 [0.00;25.0] 0.416 32
## supp_boron_mcg_dsid 21.4 [0.00;129] 0.00 [0.00;93.8] 0.00 [0.00;0.00] 0.425 32
## supp_calcium_mg_dsid 13.3 [0.00;139] 259 [54.8;555] 171 [19.9;336] 0.253 32
## supp_chloride_mg_dsid 0.00 [0.00;10.3] 0.00 [0.00;72.0] 0.00 [0.00;0.00] 0.778 32
## supp_chromium_mcg_dsid 10.0 [0.00;65.4] 0.00 [0.00;37.5] 0.00 [0.00;0.00] 0.231 32
## supp_copper_mg_dsid 0.00 [0.00;0.32] 0.00 [0.00;0.50] 0.00 [0.00;0.00] 0.608 32
## supp_fluoride_mg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## supp_iodine_mcg_dsid 0.00 [0.00;21.4] 0.00 [0.00;150] 0.00 [0.00;0.00] 0.778 32
## supp_iron_mg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.842 32
## supp_magnesium_mg_dsid 0.00 [0.00;7.14] 50.0 [0.00;197] 0.00 [0.00;50.0] 0.197 32
## supp_manganese_mg_dsid 0.00 [0.00;0.33] 0.00 [0.00;2.30] 0.00 [0.00;0.00] 0.778 32
## supp_molybdenum_mcg_dsid 12.9 [0.00;32.1] 0.00 [0.00;45.0] 0.00 [0.00;0.00] 0.522 32
## supp_nickel_mcg_dsid 0.00 [0.00;0.72] 0.00 [0.00;5.00] 0.00 [0.00;0.00] 0.778 32
## supp_phosphorus_mg_dsid 0.00 [0.00;2.86] 0.00 [0.00;20.0] 0.00 [0.00;0.00] 0.778 32
## supp_potassium_mg_dsid 0.00 [0.00;11.4] 10.7 [0.00;80.0] 0.00 [0.00;8.56] 0.601 32
## supp_selenium_mcg_dsid 0.00 [0.00;7.86] 0.00 [0.00;55.0] 0.00 [0.00;0.00] 0.778 32
## supp_silicon_mg_dsid 0.00 [0.00;0.28] 0.00 [0.00;2.00] 0.00 [0.00;0.00] 0.778 32
## supp_sodium_mg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.01] 0.00 [0.00;0.00] 0.381 32
## supp_tin_mcg_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.446 32
## supp_vanadium_mcg_dsid 0.00 [0.00;1.43] 0.00 [0.00;10.0] 0.00 [0.00;0.00] 0.778 32
## supp_zinc_mg_dsid 0.00 [0.00;7.07] 0.00 [0.00;11.0] 0.00 [0.00;7.86] 0.866 32
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.00 [0.00;0.09] 0.00 [0.00;0.00] 0.00 [0.00;0.13] 0.185 32
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.00 [0.00;0.06] 0.00 [0.00;0.00] 0.00 [0.00;0.09] 0.185 32
## supp_omega_3_fatty_acids_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.168 32
## supp_inositol_g_dsid 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.00 [0.00;0.00] . 32
## supp_choline_mg_dsid 0.00 [0.00;0.01] 0.00 [0.00;0.00] 0.00 [0.00;0.00] 0.025 32
## total_hei_2015_score 62.0 [56.6;72.9] 69.8 [65.0;73.9] 66.5 [60.6;78.6] 0.371 32
## hei_2015_total_vegetables_component_score 4.48 [3.79;4.79] 5.00 [4.78;5.00] 5.00 [3.49;5.00] 0.300 32
## hei_2015_greens_and_beans_component_score 5.00 [4.30;5.00] 5.00 [4.90;5.00] 4.60 [2.25;5.00] 0.156 32
## hei_2015_total_fruits_component_score 3.57 [1.90;5.00] 5.00 [4.36;5.00] 5.00 [5.00;5.00] 0.123 32
## hei_2015_whole_fruits_component_score 5.00 [3.68;5.00] 5.00 [5.00;5.00] 5.00 [5.00;5.00] 0.024 32
## hei_2015_whole_grains_component_score 1.82 [1.28;4.89] 2.78 [2.06;3.37] 1.93 [1.74;5.06] 0.644 32
## hei_2015_dairy_component_score 9.47 [6.06;9.77] 5.00 [3.36;8.69] 9.07 [5.45;10.0] 0.166 32
## hei_2015_total_protein_foods_component_score 5.00 [4.80;5.00] 5.00 [5.00;5.00] 5.00 [3.37;5.00] 0.034 32
## hei_2015_seafood_and_plant_proteins_component_score 5.00 [4.03;5.00] 5.00 [4.73;5.00] 5.00 [2.96;5.00] 0.720 32
## hei_2015_fatty_acids_component_score 2.05 [1.12;4.44] 4.35 [2.96;5.28] 2.72 [1.53;5.35] 0.369 32
## hei_2015_sodium_component_score 4.35 [3.50;7.21] 4.23 [2.84;4.98] 6.14 [4.72;7.03] 0.096 32
## hei_2015_refined_grains_component_score 10.0 [9.18;10.0] 9.61 [8.91;10.0] 10.0 [8.25;10.0] 0.621 32
## hei_2015_saturated_fats_component_score 4.61 [3.13;4.92] 5.74 [3.66;7.58] 5.78 [2.83;7.32] 0.547 32
## hei_2015_added_sugars_component_score 8.82 [6.23;9.50] 10.0 [9.92;10.0] 9.23 [7.12;10.0] 0.019 32
## hei_2015_density_of_total_vegetables_per_1000_kcal 0.98 [0.84;1.29] 1.38 [1.07;1.79] 1.19 [0.77;1.54] 0.387 32
## hei_2015_density_of_greens_and_beans_per_1000_kcal 0.22 [0.17;0.42] 0.28 [0.22;0.61] 0.18 [0.09;0.29] 0.209 32
## hei_2015_density_of_total_fruits_per_1000_kcal 0.57 [0.30;0.98] 0.97 [0.70;1.68] 1.22 [0.97;1.75] 0.044 32
## hei_2015_density_of_whole_fruits_per_1000_kcal 0.43 [0.30;0.85] 0.86 [0.65;1.32] 1.18 [0.79;1.70] 0.046 32
## hei_2015_density_of_whole_grains_per_1000_kcal 0.27 [0.19;0.74] 0.42 [0.31;0.50] 0.29 [0.26;0.76] 0.651 32
## hei_2015_density_of_dairy_per_1000_kcal 1.23 [0.78;1.58] 0.65 [0.44;1.13] 1.18 [0.71;1.36] 0.215 32
## hei_2015_density_of_total_protein_foods_per_1000_kcal 3.10 [2.62;3.25] 3.06 [2.91;3.64] 2.63 [1.69;3.81] 0.292 32
## hei_2015_density_of_seafood_and_plant_proteins_per_1000_kcal 0.86 [0.64;0.96] 1.25 [0.92;1.39] 1.18 [0.47;1.53] 0.406 32
## hei_2015_fatty_acid_ratio 1.47 [1.34;1.77] 1.77 [1.59;1.88] 1.55 [1.40;1.90] 0.382 32
## hei_2015_density_of_sodium_per_1000_kcal 1.61 [1.35;1.69] 1.62 [1.55;1.74] 1.45 [1.37;1.58] 0.098 32
## hei_2015_density_of_refined_grains_per_1000_kcal 1.50 [1.38;1.88] 1.90 [1.06;2.07] 1.60 [1.29;2.24] 0.993 32
## hei_2015_percent_of_calories_from_saturated_fats 12.3 [12.1;13.5] 11.4 [9.93;13.1] 11.4 [10.1;13.7] 0.568 32
## hei_2015_percent_of_calories_from_added_sugars 8.80 [5.90;13.9] 5.07 [4.21;6.55] 7.99 [6.41;12.1] 0.014 32
## sga_symmpt_score 1.00 [0.00;1.00] 0.00 [0.00;0.00] 4.00 [0.00;8.00] 0.006 32
## ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯Robust ANOVA (Energy)
Using the WRS2 R package https://cran.r-project.org/web/packages/WRS2/vignettes/WRS2.pdf some robust one-way ANOVA and post-hoc tests were calculated. No difference were found in most of the variables.
library(WRS2)
# Groups were equal
t1way(energy_from_fat_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_fat_percent_kcal ~ muscle_loss, data = food)
##
## Test statistic: F = 0.0719
## Degrees of freedom 1: 2
## Degrees of freedom 2: 11.94
## p-value: 0.93099
##
## Explanatory measure of effect size: 0.42
## Bootstrap CI: [0.12; 1.05]lincon(energy_from_fat_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_fat_percent_kcal ~ muscle_loss,
## data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no -0.72575 -5.93687 4.48537 0.8515
## maybe vs. yes -0.35756 -5.22388 4.50877 0.8515
## no vs. yes 0.36819 -4.80678 5.54317 0.8515# Groups were equal
t1way(energy_from_carbohydrates_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_carbohydrates_percent_kcal ~ muscle_loss,
## data = food)
##
## Test statistic: F = 3.6592
## Degrees of freedom 1: 2
## Degrees of freedom 2: 10.21
## p-value: 0.06337
##
## Explanatory measure of effect size: 0.57
## Bootstrap CI: [0.19; 0.99]# But there is a difference between "No" vs. "Yes" were different (p.value = 0.045)
lincon(energy_from_carbohydrates_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_carbohydrates_percent_kcal ~ muscle_loss,
## data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no 1.32525 -6.92463 9.57513 0.63929
## maybe vs. yes -4.58600 -12.89744 3.72544 0.28124
## no vs. yes -5.91125 -11.66063 -0.16187 0.04523# Groups were equal
t1way(energy_from_protein_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_protein_percent_kcal ~ muscle_loss,
## data = food)
##
## Test statistic: F = 0.006
## Degrees of freedom 1: 2
## Degrees of freedom 2: 9.05
## p-value: 0.99404
##
## Explanatory measure of effect size: 0.34
## Bootstrap CI: [0.08; 0.73]lincon(energy_from_protein_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_protein_percent_kcal ~ muscle_loss,
## data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no 0.02825 -5.94261 5.99911 0.988
## maybe vs. yes -0.13689 -6.28922 6.01544 0.988
## no vs. yes -0.16514 -4.18636 3.85609 0.988# Groups were equal
t1way(energy_from_alcohol_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_alcohol_percent_kcal ~ muscle_loss,
## data = food)
##
## Test statistic: F = 3.9126
## Degrees of freedom 1: 2
## Degrees of freedom 2: 7.34
## p-value: 0.06974
##
## Explanatory measure of effect size: 0.69
## Bootstrap CI: [0.08; 1.38]lincon(energy_from_alcohol_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_alcohol_percent_kcal ~ muscle_loss,
## data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no -3.25950 -10.89745 4.37845 0.48995
## maybe vs. yes 1.42133 -6.21456 9.05722 0.53438
## no vs. yes 4.68083 -0.17494 9.53661 0.06409# Groups were equal
t1way(energy_from_saturated_fatty_acids_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_saturated_fatty_acids_percent_kcal ~
## muscle_loss, data = food)
##
## Test statistic: F = 1.1761
## Degrees of freedom 1: 2
## Degrees of freedom 2: 12.39
## p-value: 0.34065
##
## Explanatory measure of effect size: 0.44
## Bootstrap CI: [0.16; 0.79]lincon(energy_from_saturated_fatty_acids_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_saturated_fatty_acids_percent_kcal ~
## muscle_loss, data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no 1.27200 -1.08809 3.63209 0.48544
## maybe vs. yes 0.93978 -1.66167 3.54123 0.68020
## no vs. yes -0.33222 -3.03709 2.37265 0.74736# Groups were equal
t1way(energy_from_monounsaturated_fatty_acids_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_monounsaturated_fatty_acids_percent_kcal ~
## muscle_loss, data = food)
##
## Test statistic: F = 2.1749
## Degrees of freedom 1: 2
## Degrees of freedom 2: 11.09
## p-value: 0.15964
##
## Explanatory measure of effect size: 0.59
## Bootstrap CI: [0.08; 1.61]lincon(energy_from_monounsaturated_fatty_acids_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_monounsaturated_fatty_acids_percent_kcal ~
## muscle_loss, data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no -0.90075 -2.65514 0.85364 0.36248
## maybe vs. yes -1.03978 -2.47466 0.39510 0.19790
## no vs. yes -0.13903 -1.76518 1.48712 0.81814# Groups were equal
t1way(energy_from_polyunsaturated_fatty_acids_percent_kcal ~ muscle_loss, data = food)## Call:
## t1way(formula = energy_from_polyunsaturated_fatty_acids_percent_kcal ~
## muscle_loss, data = food)
##
## Test statistic: F = 0.6134
## Degrees of freedom 1: 2
## Degrees of freedom 2: 11.2
## p-value: 0.55876
##
## Explanatory measure of effect size: 0.4
## Bootstrap CI: [0.1; 0.81]lincon(energy_from_polyunsaturated_fatty_acids_percent_kcal ~ muscle_loss, data = food)## Call:
## lincon(formula = energy_from_polyunsaturated_fatty_acids_percent_kcal ~
## muscle_loss, data = food)
##
## psihat ci.lower ci.upper p.value
## maybe vs. no -0.71550 -2.58978 1.15878 0.75533
## maybe vs. yes -0.51578 -2.18131 1.14976 0.75533
## no vs. yes 0.19972 -1.50062 1.90006 0.75533Robust Yuen t-test (Energy)
Using the WRS2 R package https://cran.r-project.org/web/packages/WRS2/vignettes/WRS2.pdf some robust t-test (with and without boostrap-t).
library(WRS2)
# without boostrap
yuen(energy_from_fat_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_fat_percent_kcal ~ cancer_type, data = food)
##
## Test statistic: 1.9845 (df = 13.35), p-value = 0.06815
##
## Trimmed mean difference: 3.26055
## 95 percent confidence interval:
## -0.2795 6.8006
##
## Explanatory measure of effect size: 0.53# with boostrap
yuenbt(energy_from_fat_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_fat_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: 1.9372 (df = NA), p-value = 0.0818
##
## Trimmed mean difference: 3.26055
## 95 percent confidence interval:
## -0.8101 7.3312# without boostrap
yuen(energy_from_carbohydrates_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_carbohydrates_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: 2.3355 (df = 17.23), p-value = 0.03185
##
## Trimmed mean difference: -4.89495
## 95 percent confidence interval:
## -9.3124 -0.4775
##
## Explanatory measure of effect size: 0.54# with boostrap
yuenbt(energy_from_carbohydrates_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_carbohydrates_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: -2.2855 (df = NA), p-value = 0.05008
##
## Trimmed mean difference: -4.89495
## 95 percent confidence interval:
## -9.7369 -0.053# without boostrap
yuen(energy_from_protein_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_protein_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: 1.7269 (df = 16.66), p-value = 0.10268
##
## Trimmed mean difference: 2.31154
## 95 percent confidence interval:
## -0.517 5.1401
##
## Explanatory measure of effect size: 0.43# with boostrap
yuenbt(energy_from_protein_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_protein_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: 1.6891 (df = NA), p-value = 0.12855
##
## Trimmed mean difference: 2.31154
## 95 percent confidence interval:
## -0.7893 5.4123# without boostrap
yuen(energy_from_alcohol_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_alcohol_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: 0.5502 (df = 12.9), p-value = 0.59159
##
## Trimmed mean difference: -1.00868
## 95 percent confidence interval:
## -4.9726 2.9552
##
## Explanatory measure of effect size: 0.15# with boostrap
yuenbt(energy_from_alcohol_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_alcohol_percent_kcal ~ cancer_type,
## data = food)
##
## Test statistic: -0.537 (df = NA), p-value = 0.60434
##
## Trimmed mean difference: -1.00868
## 95 percent confidence interval:
## -5.1063 3.089# without boostrap
yuen(energy_from_saturated_fatty_acids_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_saturated_fatty_acids_percent_kcal ~
## cancer_type, data = food)
##
## Test statistic: 2.2547 (df = 15.54), p-value = 0.03897
##
## Trimmed mean difference: 1.82538
## 95 percent confidence interval:
## 0.1049 3.5458
##
## Explanatory measure of effect size: 0.56# with boostrap
yuenbt(energy_from_saturated_fatty_acids_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_saturated_fatty_acids_percent_kcal ~
## cancer_type, data = food)
##
## Test statistic: 2.2037 (df = NA), p-value = 0.02504
##
## Trimmed mean difference: 1.82538
## 95 percent confidence interval:
## 0.2077 3.4431# without boostrap
yuen(energy_from_monounsaturated_fatty_acids_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_monounsaturated_fatty_acids_percent_kcal ~
## cancer_type, data = food)
##
## Test statistic: 1.4526 (df = 17.29), p-value = 0.16424
##
## Trimmed mean difference: 0.80209
## 95 percent confidence interval:
## -0.3614 1.9656
##
## Explanatory measure of effect size: 0.42# with boostrap
yuenbt(energy_from_monounsaturated_fatty_acids_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_monounsaturated_fatty_acids_percent_kcal ~
## cancer_type, data = food)
##
## Test statistic: 1.4216 (df = NA), p-value = 0.16528
##
## Trimmed mean difference: 0.80209
## 95 percent confidence interval:
## -0.4036 2.0077# without boostrap
yuen(energy_from_polyunsaturated_fatty_acids_percent_kcal ~ cancer_type, data = food)## Call:
## yuen(formula = energy_from_polyunsaturated_fatty_acids_percent_kcal ~
## cancer_type, data = food)
##
## Test statistic: 0.7268 (df = 11.06), p-value = 0.48246
##
## Trimmed mean difference: 0.41868
## 95 percent confidence interval:
## -0.8484 1.6857
##
## Explanatory measure of effect size: 0.22# with boostrap
yuenbt(energy_from_polyunsaturated_fatty_acids_percent_kcal ~ cancer_type, data = food)## Call:
## yuenbt(formula = energy_from_polyunsaturated_fatty_acids_percent_kcal ~
## cancer_type, data = food)
##
## Test statistic: 0.7085 (df = NA), p-value = 0.42738
##
## Trimmed mean difference: 0.41868
## 95 percent confidence interval:
## -0.8041 1.6414Energy Bayesian t-test
The following analysis are Bayesian analysis using JAGS program and MCMC (Markov Chain MonteCarlo) resampling. They are robust statistics not because 20% trimmed mean, but it uses a t-distribution in the place of Gaussian. See: http://www.sumsar.net/blog/2014/02/bayesian-first-aid-one-sample-t-test/
To interpret these Bayesian results we should look at “Difference of Means” and “Effect Size” 95% HDI (high density interval). If HDI values cross the zero-value, the two means (Breast and Colorectal) are not different. If HDI values DO NOT cross the zero-value, so the means of the two groups are different! Note. I do not know which group is Breast or Colorectal, because I have only 1 and 2 labels. Group 1 (N=11) and Group 2 (N=21) are not equally distributed! So, t-test should be interpreted with caution.
library(BayesianFirstAid)
# Fat (groups had different means)
fit1 <- bayes.t.test(energy_from_fat_percent_kcal ~ cancer_type, data = food)
summary(fit1)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_fat_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 37.510 1.340 34.909 40.228 0.000 1.000
## sigma_x 4.111 1.167 2.272 6.464 0.000 1.000
## mu_y 33.813 1.188 31.434 36.122 0.000 1.000
## sigma_y 5.146 0.988 3.391 7.150 0.000 1.000
## mu_diff 3.697 1.791 0.157 7.231 0.021 0.979
## sigma_diff -1.035 1.505 -3.946 1.983 0.786 0.214
## nu 34.687 29.448 1.402 92.644 0.000 1.000
## eff_size 0.805 0.395 0.034 1.579 0.021 0.979
## x_pred 37.515 4.803 27.644 46.906 0.000 1.000
## y_pred 33.720 5.753 22.524 45.239 0.000 1.000
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x 34.829 36.691 37.509 38.346 40.153
## sigma_x 2.497 3.312 3.894 4.664 7.017
## mu_y 31.427 33.055 33.822 34.595 36.118
## sigma_y 3.532 4.463 5.033 5.693 7.380
## mu_diff 0.157 2.526 3.693 4.864 7.231
## sigma_diff -3.804 -1.982 -1.101 -0.176 2.153
## nu 4.142 13.788 26.087 46.789 111.654
## eff_size 0.032 0.540 0.805 1.069 1.578
## x_pred 27.907 34.689 37.491 40.324 47.245
## y_pred 22.209 30.192 33.763 37.280 45.005plot(fit1)
# Carbohydrates (groups had different means)
fit2 <- bayes.t.test(energy_from_carbohydrates_percent_kcal ~ cancer_type, data = food)
summary(fit2)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_carbohydrates_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 44.406 1.346 41.716 47.071 0.000 1.000
## sigma_x 4.118 1.172 2.252 6.445 0.000 1.000
## mu_y 48.604 1.585 45.488 51.733 0.000 1.000
## sigma_y 6.740 1.295 4.431 9.385 0.000 1.000
## mu_diff -4.198 2.087 -8.287 -0.076 0.977 0.023
## sigma_diff -2.622 1.724 -6.025 0.765 0.940 0.060
## nu 32.558 28.353 1.369 88.294 0.000 1.000
## eff_size -0.769 0.401 -1.558 0.009 0.977 0.023
## x_pred 44.405 4.809 34.930 53.954 0.000 1.000
## y_pred 48.544 7.668 33.169 63.354 0.000 1.000
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x 41.733 43.556 44.401 45.240 47.097
## sigma_x 2.477 3.315 3.915 4.679 6.948
## mu_y 45.484 47.559 48.594 49.649 51.731
## sigma_y 4.596 5.840 6.600 7.493 9.637
## mu_diff -8.295 -5.563 -4.186 -2.828 -0.083
## sigma_diff -5.981 -3.695 -2.628 -1.586 0.843
## nu 3.733 12.447 24.185 43.777 107.626
## eff_size -1.592 -1.025 -0.756 -0.497 -0.014
## x_pred 34.938 41.545 44.389 47.236 53.986
## y_pred 33.311 43.828 48.656 53.281 63.591plot(fit2)
# Protein (groups did not have different means)
fit3 <- bayes.t.test(energy_from_protein_percent_kcal ~ cancer_type, data = food)
summary(fit3)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_protein_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 17.533 0.971 15.531 19.410 0.00 1.00
## sigma_x 2.970 0.858 1.611 4.649 0.00 1.00
## mu_y 15.813 0.769 14.287 17.348 0.00 1.00
## sigma_y 3.358 0.611 2.281 4.591 0.00 1.00
## mu_diff 1.720 1.246 -0.806 4.124 0.08 0.92
## sigma_diff -0.388 1.046 -2.413 1.681 0.69 0.31
## nu 37.756 30.040 1.665 98.249 0.00 1.00
## eff_size 0.553 0.399 -0.229 1.336 0.08 0.92
## x_pred 17.523 3.401 10.831 24.440 0.00 1.00
## y_pred 15.824 3.718 8.690 23.467 0.00 1.00
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x 15.571 16.939 17.538 18.140 19.460
## sigma_x 1.784 2.385 2.814 3.373 5.067
## mu_y 14.288 15.312 15.813 16.315 17.351
## sigma_y 2.378 2.927 3.282 3.712 4.753
## mu_diff -0.751 0.913 1.721 2.529 4.184
## sigma_diff -2.246 -1.049 -0.468 0.189 1.901
## nu 4.918 16.127 29.467 50.536 118.011
## eff_size -0.218 0.286 0.548 0.815 1.348
## x_pred 10.656 15.502 17.535 19.547 24.292
## y_pred 8.488 13.497 15.805 18.158 23.293plot(fit3)
# Alcohol (groups did not have different means)
fit4 <- bayes.t.test(energy_from_alcohol_percent_kcal ~ cancer_type, data = food)
summary(fit4)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_alcohol_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 1.120 1.051 -0.519 3.509 0.071 0.929
## sigma_x 2.291 1.351 0.399 4.945 0.000 1.000
## mu_y 2.166 0.989 0.406 4.151 0.003 0.997
## sigma_y 3.006 1.174 1.159 5.311 0.000 1.000
## mu_diff -1.046 1.285 -3.727 1.532 0.822 0.178
## sigma_diff -0.715 1.405 -3.282 2.362 0.741 0.259
## nu 2.681 3.790 1.000 5.878 0.000 1.000
## eff_size -0.441 0.485 -1.396 0.508 0.822 0.178
## x_pred 1.027 16.482 -9.227 12.665 0.335 0.665
## y_pred 2.568 69.339 -11.080 17.052 0.274 0.726
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x -0.341 0.434 0.877 1.585 3.783
## sigma_x 0.586 1.248 1.988 3.053 5.577
## mu_y 0.563 1.482 2.056 2.717 4.417
## sigma_y 1.403 2.195 2.796 3.562 5.920
## mu_diff -3.570 -1.824 -1.065 -0.312 1.706
## sigma_diff -3.300 -1.564 -0.813 0.041 2.354
## nu 1.036 1.361 1.814 2.666 8.665
## eff_size -1.409 -0.759 -0.436 -0.119 0.500
## x_pred -9.396 -0.636 0.887 2.868 12.501
## y_pred -11.931 -0.287 2.022 4.563 16.259plot(fit4)
# Saturated fatty acids (groups had different means)
fit5 <- bayes.t.test(energy_from_saturated_fatty_acids_percent_kcal ~ cancer_type, data = food)
summary(fit5)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_saturated_fatty_acids_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 13.333 0.977 11.404 15.298 0.000 1.000
## sigma_x 3.009 0.888 1.513 4.774 0.000 1.000
## mu_y 11.052 0.563 9.956 12.185 0.000 1.000
## sigma_y 2.408 0.445 1.638 3.334 0.000 1.000
## mu_diff 2.281 1.126 0.108 4.575 0.022 0.978
## sigma_diff 0.601 0.983 -1.210 2.575 0.266 0.734
## nu 35.446 31.033 1.425 96.417 0.000 1.000
## eff_size 0.852 0.421 0.049 1.711 0.022 0.978
## x_pred 13.339 3.508 6.471 20.340 0.002 0.998
## y_pred 11.054 2.706 5.585 16.254 0.001 0.999
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x 11.418 12.731 13.326 13.934 15.316
## sigma_x 1.716 2.405 2.861 3.442 5.148
## mu_y 9.937 10.684 11.052 11.422 12.171
## sigma_y 1.694 2.100 2.355 2.660 3.434
## mu_diff 0.073 1.547 2.269 2.989 4.553
## sigma_diff -1.036 -0.040 0.493 1.125 2.835
## nu 3.988 13.684 26.060 47.529 118.342
## eff_size 0.024 0.571 0.849 1.132 1.691
## x_pred 6.434 11.301 13.327 15.377 20.313
## y_pred 5.689 9.399 11.050 12.720 16.384plot(fit5)
# Monounsaturated fatty acids (groups did not have different means)
fit6 <- bayes.t.test(energy_from_monounsaturated_fatty_acids_percent_kcal ~ cancer_type, data = food)
summary(fit6)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_monounsaturated_fatty_acids_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 13.158 0.474 12.253 14.137 0.000 1.000
## sigma_x 1.324 0.483 0.526 2.310 0.000 1.000
## mu_y 12.314 0.585 11.146 13.489 0.000 1.000
## sigma_y 2.306 0.747 1.018 3.813 0.000 1.000
## mu_diff 0.844 0.737 -0.596 2.339 0.117 0.883
## sigma_diff -0.982 0.775 -2.571 0.500 0.917 0.083
## nu 8.530 13.194 1.002 31.675 0.000 1.000
## eff_size 0.476 0.409 -0.324 1.277 0.117 0.883
## x_pred 13.130 3.018 8.902 17.199 0.002 0.998
## y_pred 12.309 4.468 5.336 19.133 0.006 0.994
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x 12.273 12.844 13.136 13.448 14.164
## sigma_x 0.597 0.992 1.250 1.570 2.474
## mu_y 11.193 11.941 12.296 12.666 13.551
## sigma_y 1.145 1.757 2.205 2.760 3.989
## mu_diff -0.602 0.365 0.840 1.316 2.334
## sigma_diff -2.635 -1.445 -0.940 -0.483 0.451
## nu 1.320 2.604 4.168 8.221 46.671
## eff_size -0.291 0.196 0.461 0.741 1.318
## x_pred 9.039 12.155 13.131 14.143 17.352
## y_pred 5.484 10.616 12.304 14.030 19.302plot(fit6)
# Polyunsaturated fatty acids (groups did not have different means)
fit7 <- bayes.t.test(energy_from_polyunsaturated_fatty_acids_percent_kcal ~ cancer_type, data = food)
summary(fit7)## Data
## group 1, n = 11
## group 2, n = 21
##
## Model parameters and generated quantities
## mu_x: the mean of group 1
## sigma_x: the scale of group 1 , a consistent
## estimate of SD when nu is large.
## mu_y: the mean of group 2
## sigma_y: the scale of group 2
## mu_diff: the difference in means (mu_x - mu_y)
## sigma_diff: the difference in scale (sigma_x - sigma_y)
## nu: the degrees-of-freedom for the t distribution
## fitted to energy_from_polyunsaturated_fatty_acids_percent_kcal by cancer_type
## eff_size: the effect size calculated as
## (mu_x - mu_y) / sqrt((sigma_x^2 + sigma_y^2) / 2)
## x_pred: predicted distribution for a new datapoint
## generated as group 1
## y_pred: predicted distribution for a new datapoint
## generated as group 2
##
## Measures
## mean sd HDIlo HDIup %<comp %>comp
## mu_x 7.451 0.492 6.501 8.461 0.000 1.000
## sigma_x 1.531 0.440 0.830 2.391 0.000 1.000
## mu_y 7.039 0.344 6.361 7.727 0.000 1.000
## sigma_y 1.484 0.270 1.013 2.039 0.000 1.000
## mu_diff 0.412 0.602 -0.737 1.636 0.238 0.762
## sigma_diff 0.047 0.514 -0.917 1.084 0.500 0.500
## nu 36.771 29.637 1.905 95.567 0.000 1.000
## eff_size 0.279 0.392 -0.482 1.052 0.238 0.762
## x_pred 7.467 1.760 3.920 10.982 0.001 0.999
## y_pred 7.035 1.654 3.694 10.222 0.001 0.999
##
## 'HDIlo' and 'HDIup' are the limits of a 95% HDI credible interval.
## '%<comp' and '%>comp' are the probabilities of the respective parameter being
## smaller or larger than 0.
##
## Quantiles
## q2.5% q25% median q75% q97.5%
## mu_x 6.463 7.149 7.451 7.760 8.427
## sigma_x 0.924 1.233 1.449 1.737 2.610
## mu_y 6.350 6.816 7.038 7.262 7.719
## sigma_y 1.047 1.294 1.449 1.639 2.102
## mu_diff -0.787 0.024 0.412 0.805 1.598
## sigma_diff -0.836 -0.282 0.000 0.321 1.213
## nu 4.864 15.655 28.576 48.890 114.444
## eff_size -0.490 0.016 0.279 0.541 1.047
## x_pred 3.934 6.426 7.466 8.513 11.002
## y_pred 3.761 6.013 7.034 8.066 10.303plot(fit7)
Energy subset
Select only Energy variables.
energy <- food %>% select(starts_with("energy_"))
# Histogram
plot_histogram(energy)
# Correlations (auto)
energy.cor <- qgraph::cor_auto(energy)
plot_correlation(energy.cor)
# Correlations linear (Pearson)
plot_correlation(energy)
# Network analysis
fit.energy <- EGAnet::EGA(energy)
fit.energy## EGA Results:
##
## Number of Dimensions:
## [1] 2
##
## Items per Dimension:
## items dimension
## en_ energy_kcal 1
## enrgy_frm_c__ energy_from_carbohydrates_percent_kcal 1
## enrgy_frm_p__ energy_from_protein_percent_kcal 1
## enrgy_frm_l__ energy_from_alcohol_percent_kcal 1
## enrgy_frm_f__ energy_from_fat_percent_kcal 2
## enrgy_frm_s____ energy_from_saturated_fatty_acids_percent_kcal 2
## enrgy_frm_m____ energy_from_monounsaturated_fatty_acids_percent_kcal 2
## enrgy_frm_p____ energy_from_polyunsaturated_fatty_acids_percent_kcal 2# Descriptive analysis
des.energy <- psych::describe(energy, tr =.2)
print(des.energy, digits=2)## vars n mean sd
## energy_kcal 1 32 1616.94 635.40
## energy_from_fat_percent_kcal 2 32 34.99 4.92
## energy_from_carbohydrates_percent_kcal 3 32 47.05 6.11
## energy_from_protein_percent_kcal 4 32 16.43 3.09
## energy_from_alcohol_percent_kcal 5 32 4.00 6.79
## energy_from_saturated_fatty_acids_percent_kcal 6 32 11.87 2.71
## energy_from_monounsaturated_fatty_acids_percent_kcal 7 32 12.96 2.90
## energy_from_polyunsaturated_fatty_acids_percent_kcal 8 32 7.19 1.40
## median trimmed mad
## energy_kcal 1535.78 1536.56 448.40
## energy_from_fat_percent_kcal 35.38 35.42 4.23
## energy_from_carbohydrates_percent_kcal 48.08 47.06 6.36
## energy_from_protein_percent_kcal 16.10 16.33 4.05
## energy_from_alcohol_percent_kcal 1.41 2.18 2.09
## energy_from_saturated_fatty_acids_percent_kcal 11.50 11.83 2.63
## energy_from_monounsaturated_fatty_acids_percent_kcal 12.61 12.68 1.33
## energy_from_polyunsaturated_fatty_acids_percent_kcal 7.44 7.16 1.56
## min max range
## energy_kcal 600.60 3433.88 2833.28
## energy_from_fat_percent_kcal 21.89 43.47 21.58
## energy_from_carbohydrates_percent_kcal 30.63 60.54 29.91
## energy_from_protein_percent_kcal 10.89 21.40 10.51
## energy_from_alcohol_percent_kcal 0.00 35.32 35.32
## energy_from_saturated_fatty_acids_percent_kcal 6.83 19.66 12.83
## energy_from_monounsaturated_fatty_acids_percent_kcal 8.19 24.40 16.21
## energy_from_polyunsaturated_fatty_acids_percent_kcal 4.29 10.06 5.77
## skew kurtosis se
## energy_kcal 1.04 1.21 112.32
## energy_from_fat_percent_kcal -0.62 0.07 0.87
## energy_from_carbohydrates_percent_kcal -0.21 0.07 1.08
## energy_from_protein_percent_kcal 0.10 -1.31 0.55
## energy_from_alcohol_percent_kcal 3.12 11.36 1.20
## energy_from_saturated_fatty_acids_percent_kcal 0.45 0.63 0.48
## energy_from_monounsaturated_fatty_acids_percent_kcal 1.83 5.51 0.51
## energy_from_polyunsaturated_fatty_acids_percent_kcal 0.04 -0.74 0.25# Descriptive analysis (by group)
des.energyBy <- psych::describeBy(energy, food$muscle_loss, tr =.2)
print(des.energyBy, digits=2)##
## Descriptive statistics by group
## group: maybe
## vars n mean sd
## energy_kcal 1 7 1633.36 477.07
## energy_from_fat_percent_kcal 2 7 33.90 5.91
## energy_from_carbohydrates_percent_kcal 3 7 44.79 7.72
## energy_from_protein_percent_kcal 4 7 16.43 3.13
## energy_from_alcohol_percent_kcal 5 7 6.66 12.98
## energy_from_saturated_fatty_acids_percent_kcal 6 7 12.17 2.61
## energy_from_monounsaturated_fatty_acids_percent_kcal 7 7 12.07 2.53
## energy_from_polyunsaturated_fatty_acids_percent_kcal 8 7 6.71 1.22
## median trimmed mad
## energy_kcal 1766.21 1654.77 422.21
## energy_from_fat_percent_kcal 34.87 34.97 3.75
## energy_from_carbohydrates_percent_kcal 48.34 45.82 8.05
## energy_from_protein_percent_kcal 15.54 16.29 3.22
## energy_from_alcohol_percent_kcal 0.12 2.26 0.18
## energy_from_saturated_fatty_acids_percent_kcal 12.31 12.68 0.71
## energy_from_monounsaturated_fatty_acids_percent_kcal 11.97 11.92 0.80
## energy_from_polyunsaturated_fatty_acids_percent_kcal 6.41 6.72 1.25
## min max range
## energy_kcal 936.25 2223.40 1287.15
## energy_from_fat_percent_kcal 21.89 40.59 18.70
## energy_from_carbohydrates_percent_kcal 30.63 53.77 23.14
## energy_from_protein_percent_kcal 13.00 20.56 7.56
## energy_from_alcohol_percent_kcal 0.00 35.32 35.32
## energy_from_saturated_fatty_acids_percent_kcal 6.83 14.97 8.14
## energy_from_monounsaturated_fatty_acids_percent_kcal 8.19 16.72 8.53
## energy_from_polyunsaturated_fatty_acids_percent_kcal 4.85 8.52 3.67
## skew kurtosis se
## energy_kcal -0.31 -1.65 180.32
## energy_from_fat_percent_kcal -0.96 -0.30 2.23
## energy_from_carbohydrates_percent_kcal -0.62 -1.07 2.92
## energy_from_protein_percent_kcal 0.28 -1.83 1.18
## energy_from_alcohol_percent_kcal 1.46 0.43 4.91
## energy_from_saturated_fatty_acids_percent_kcal -0.98 -0.25 0.99
## energy_from_monounsaturated_fatty_acids_percent_kcal 0.36 -0.58 0.96
## energy_from_polyunsaturated_fatty_acids_percent_kcal 0.01 -1.45 0.46
## ------------------------------------------------------------
## group: no
## vars n mean sd
## energy_kcal 1 12 1474.57 238.17
## energy_from_fat_percent_kcal 2 12 35.67 4.56
## energy_from_carbohydrates_percent_kcal 3 12 44.82 3.94
## energy_from_protein_percent_kcal 4 12 16.47 2.74
## energy_from_alcohol_percent_kcal 5 12 5.69 4.29
## energy_from_saturated_fatty_acids_percent_kcal 6 12 11.30 2.09
## energy_from_monounsaturated_fatty_acids_percent_kcal 7 12 13.83 3.93
## energy_from_polyunsaturated_fatty_acids_percent_kcal 8 12 7.52 1.53
## median trimmed mad
## energy_kcal 1474.54 1452.77 284.83
## energy_from_fat_percent_kcal 35.40 35.69 4.68
## energy_from_carbohydrates_percent_kcal 44.55 44.50 5.43
## energy_from_protein_percent_kcal 16.10 16.26 2.16
## energy_from_alcohol_percent_kcal 6.13 5.52 5.83
## energy_from_saturated_fatty_acids_percent_kcal 11.40 11.41 2.41
## energy_from_monounsaturated_fatty_acids_percent_kcal 12.61 12.82 1.85
## energy_from_polyunsaturated_fatty_acids_percent_kcal 7.58 7.44 1.78
## min max range
## energy_kcal 1159.43 1971.72 812.29
## energy_from_fat_percent_kcal 27.49 43.47 15.98
## energy_from_carbohydrates_percent_kcal 40.29 51.54 11.25
## energy_from_protein_percent_kcal 12.10 21.40 9.30
## energy_from_alcohol_percent_kcal 0.00 12.46 12.46
## energy_from_saturated_fatty_acids_percent_kcal 7.00 14.20 7.20
## energy_from_monounsaturated_fatty_acids_percent_kcal 10.15 24.40 14.25
## energy_from_polyunsaturated_fatty_acids_percent_kcal 5.46 10.06 4.60
## skew kurtosis se
## energy_kcal 0.47 -0.80 68.75
## energy_from_fat_percent_kcal -0.09 -1.01 1.32
## energy_from_carbohydrates_percent_kcal 0.30 -1.58 1.14
## energy_from_protein_percent_kcal 0.30 -0.97 0.79
## energy_from_alcohol_percent_kcal 0.05 -1.52 1.24
## energy_from_saturated_fatty_acids_percent_kcal -0.37 -0.82 0.60
## energy_from_monounsaturated_fatty_acids_percent_kcal 1.59 1.64 1.13
## energy_from_polyunsaturated_fatty_acids_percent_kcal 0.19 -1.47 0.44
## ------------------------------------------------------------
## group: yes
## vars n mean sd
## energy_kcal 1 13 1739.51 916.78
## energy_from_fat_percent_kcal 2 13 34.95 5.00
## energy_from_carbohydrates_percent_kcal 3 13 50.33 5.73
## energy_from_protein_percent_kcal 4 13 16.39 3.59
## energy_from_alcohol_percent_kcal 5 13 1.01 1.09
## energy_from_saturated_fatty_acids_percent_kcal 6 13 12.23 3.33
## energy_from_monounsaturated_fatty_acids_percent_kcal 7 13 12.63 1.76
## energy_from_polyunsaturated_fatty_acids_percent_kcal 8 13 7.13 1.40
## median trimmed mad
## energy_kcal 1531.01 1633.77 899.61
## energy_from_fat_percent_kcal 35.40 35.33 4.42
## energy_from_carbohydrates_percent_kcal 51.58 50.41 5.57
## energy_from_protein_percent_kcal 16.99 16.43 5.09
## energy_from_alcohol_percent_kcal 0.72 0.84 1.07
## energy_from_saturated_fatty_acids_percent_kcal 11.38 11.74 3.13
## energy_from_monounsaturated_fatty_acids_percent_kcal 13.12 12.96 0.86
## energy_from_polyunsaturated_fatty_acids_percent_kcal 7.69 7.24 0.83
## min max range
## energy_kcal 600.60 3433.88 2833.28
## energy_from_fat_percent_kcal 25.79 42.06 16.27
## energy_from_carbohydrates_percent_kcal 39.92 60.54 20.62
## energy_from_protein_percent_kcal 10.89 21.37 10.48
## energy_from_alcohol_percent_kcal 0.00 3.26 3.26
## energy_from_saturated_fatty_acids_percent_kcal 7.43 19.66 12.23
## energy_from_monounsaturated_fatty_acids_percent_kcal 8.41 14.64 6.23
## energy_from_polyunsaturated_fatty_acids_percent_kcal 4.29 9.55 5.26
## skew kurtosis se
## energy_kcal 0.52 -1.05 254.27
## energy_from_fat_percent_kcal -0.38 -0.97 1.39
## energy_from_carbohydrates_percent_kcal -0.12 -0.93 1.59
## energy_from_protein_percent_kcal -0.06 -1.72 1.00
## energy_from_alcohol_percent_kcal 0.65 -1.00 0.30
## energy_from_saturated_fatty_acids_percent_kcal 0.73 -0.36 0.92
## energy_from_monounsaturated_fatty_acids_percent_kcal -1.10 0.27 0.49
## energy_from_polyunsaturated_fatty_acids_percent_kcal -0.37 -0.74 0.39SGA subset
Select only SGA variables.
sga <- food %>% select(starts_with("sga_"))
# Barplots
plot_bar(sga)
# Histogram
plot_histogram(sga)
# Correlations ordinal (tetrachoric or polychoric)
sga.cor <- qgraph::cor_auto(sga)
plot_correlation(sga.cor)
# Correlations linear (Pearson)
plot_correlation(sga)
# Network analysis
fit.sga <- EGAnet::EGA(sga)
fit.sga## EGA Results:
##
## Number of Dimensions:
## [1] 3
##
## Items per Dimension:
## items dimension
## sg_dry sga_dry 1
## sg_v sga_vomit 1
## sg_c sga_constipation 1
## sg_pn sga_pain 1
## sg_th sga_other 1
## sg_pp sga_appetite 2
## sg_ts sga_taste 2
## sg_n sga_nausea 2
## sg_f sga_full 2
## sg_tr sga_tired 2
## sg_s sga_smell 2
## sg_drr sga_diarrhea 3
## sg_m sga_mouth 3
## s__ sga_symmpt_score 3# Descriptive analysis
des.sga <- psych::describe(sga, tr =.2)
print(des.sga, digits=2)## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 32 1.81 0.40 2 2.00 0 1 2 1 -1.53
## sga_diarrhea 2 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_taste 3 32 1.81 0.40 2 2.00 0 1 2 1 -1.53
## sga_nausea 4 32 1.88 0.34 2 2.00 0 1 2 1 -2.16
## sga_dry 5 32 1.97 0.18 2 2.00 0 1 2 1 -5.14
## sga_full 6 32 1.81 0.40 2 2.00 0 1 2 1 -1.53
## sga_vomit 7 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_mouth 8 32 1.91 0.30 2 2.00 0 1 2 1 -2.66
## sga_tired 9 32 1.75 0.44 2 1.90 0 1 2 1 -1.10
## sga_constipation 10 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_smell 11 32 1.91 0.30 2 2.00 0 1 2 1 -2.66
## sga_pain 12 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_other 13 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_symmpt_score 14 32 2.31 3.81 0 0.95 0 0 15 15 1.72
## kurtosis se
## sga_appetite 0.34 0.07
## sga_diarrhea 10.20 0.04
## sga_taste 0.34 0.07
## sga_nausea 2.76 0.06
## sga_dry 25.18 0.03
## sga_full 0.34 0.07
## sga_vomit 10.20 0.04
## sga_mouth 5.23 0.05
## sga_tired -0.81 0.08
## sga_constipation 10.20 0.04
## sga_smell 5.23 0.05
## sga_pain 10.20 0.04
## sga_other 10.20 0.04
## sga_symmpt_score 2.22 0.67# Descriptive analysis (by Group)
des.sgaBy <- psych::describeBy(sga, food$muscle_loss, tr =.2)
print(des.sgaBy, digits=2)##
## Descriptive statistics by group
## group: maybe
## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_diarrhea 2 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_taste 3 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_nausea 4 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_dry 5 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_full 6 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_vomit 7 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_mouth 8 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_tired 9 7 1.71 0.49 2 1.8 0.00 1 2 1 -0.75
## sga_constipation 10 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_smell 11 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_pain 12 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_other 13 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_symmpt_score 14 7 1.57 2.88 1 0.6 1.48 0 8 8 1.52
## kurtosis se
## sga_appetite 0.80 0.14
## sga_diarrhea NaN 0.00
## sga_taste 0.80 0.14
## sga_nausea 0.80 0.14
## sga_dry NaN 0.00
## sga_full 0.80 0.14
## sga_vomit NaN 0.00
## sga_mouth 0.80 0.14
## sga_tired -1.60 0.18
## sga_constipation NaN 0.00
## sga_smell NaN 0.00
## sga_pain NaN 0.00
## sga_other 0.80 0.14
## sga_symmpt_score 0.59 1.09
## ------------------------------------------------------------
## group: no
## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_diarrhea 2 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_taste 3 12 1.92 0.29 2 2 0 1 2 1 -2.65
## sga_nausea 4 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_dry 5 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_full 6 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_vomit 7 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_mouth 8 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_tired 9 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_constipation 10 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_smell 11 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_pain 12 12 1.92 0.29 2 2 0 1 2 1 -2.65
## sga_other 13 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_symmpt_score 14 12 0.33 1.15 0 0 0 0 4 4 2.65
## kurtosis se
## sga_appetite NaN 0.00
## sga_diarrhea NaN 0.00
## sga_taste 5.48 0.08
## sga_nausea NaN 0.00
## sga_dry NaN 0.00
## sga_full NaN 0.00
## sga_vomit NaN 0.00
## sga_mouth NaN 0.00
## sga_tired NaN 0.00
## sga_constipation NaN 0.00
## sga_smell NaN 0.00
## sga_pain 5.48 0.08
## sga_other NaN 0.00
## sga_symmpt_score 5.48 0.33
## ------------------------------------------------------------
## group: yes
## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 13 1.62 0.51 2 1.67 0.00 1 2 1 -0.42
## sga_diarrhea 2 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_taste 3 13 1.69 0.48 2 1.78 0.00 1 2 1 -0.74
## sga_nausea 4 13 1.77 0.44 2 1.89 0.00 1 2 1 -1.13
## sga_dry 5 13 1.92 0.28 2 2.00 0.00 1 2 1 -2.82
## sga_full 6 13 1.62 0.51 2 1.67 0.00 1 2 1 -0.42
## sga_vomit 7 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_mouth 8 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_tired 9 13 1.54 0.52 2 1.56 0.00 1 2 1 -0.14
## sga_constipation 10 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_smell 11 13 1.77 0.44 2 1.89 0.00 1 2 1 -1.13
## sga_pain 12 13 1.92 0.28 2 2.00 0.00 1 2 1 -2.82
## sga_other 13 13 1.92 0.28 2 2.00 0.00 1 2 1 -2.82
## sga_symmpt_score 14 13 4.54 4.75 4 3.67 5.93 0 15 15 0.78
## kurtosis se
## sga_appetite -1.96 0.14
## sga_diarrhea 0.99 0.10
## sga_taste -1.56 0.13
## sga_nausea -0.76 0.12
## sga_dry 6.44 0.08
## sga_full -1.96 0.14
## sga_vomit 0.99 0.10
## sga_mouth 0.99 0.10
## sga_tired -2.13 0.14
## sga_constipation 0.99 0.10
## sga_smell -0.76 0.12
## sga_pain 6.44 0.08
## sga_other 6.44 0.08
## sga_symmpt_score -0.62 1.32HEI_2015 subset
Select only HEI_2015 variables.
hei <- food %>% select(starts_with("hei_2015_"))
# Histogram
plot_histogram(hei)
# Correlations ordinal (tetrachoric or polychoric)
hei.cor <- qgraph::cor_auto(hei)
plot_correlation(hei.cor)
# Correlations linear (Pearson)
plot_correlation(hei)
# Network analysis
fit.hei <- EGAnet::EGA(hei)
fit.hei## EGA Results:
##
## Number of Dimensions:
## [1] 8
##
## Items per Dimension:
## items
## h_2015_ttl_v__ hei_2015_total_vegetables_component_score
## h_2015_f___ hei_2015_fatty_acids_component_score
## h_2015_s___ hei_2015_saturated_fats_component_score
## h_2015_dnsty_f_ttl_v__1000_ hei_2015_density_of_total_vegetables_per_1000_kcal
## h_2015_dnsty_f_g____1000_ hei_2015_density_of_greens_and_beans_per_1000_kcal
## h_2015________ hei_2015_density_of_seafood_and_plant_proteins_per_1000_kcal
## h_2015_f__ hei_2015_fatty_acid_ratio
## h_2015_prcnt_f_clrs_frm_s_ hei_2015_percent_of_calories_from_saturated_fats
## h_2015_t____ hei_2015_total_protein_foods_component_score
## h_2015_s__ hei_2015_sodium_component_score
## h_2015_dnsty_f_t____1000_ hei_2015_density_of_total_protein_foods_per_1000_kcal
## h_2015_dnsty_f_s__1000_ hei_2015_density_of_sodium_per_1000_kcal
## h_2015_ttl_f__ hei_2015_total_fruits_component_score
## h_2015_whl_f__ hei_2015_whole_fruits_component_score
## h_2015_dnsty_f_ttl_f__1000_ hei_2015_density_of_total_fruits_per_1000_kcal
## h_2015_dnsty_f_whl_f__1000_ hei_2015_density_of_whole_fruits_per_1000_kcal
## h_2015_g____ hei_2015_greens_and_beans_component_score
## h_2015_s_____ hei_2015_seafood_and_plant_proteins_component_score
## h_2015_r___ hei_2015_refined_grains_component_score
## h_2015_dnsty_f_r___1000_ hei_2015_density_of_refined_grains_per_1000_kcal
## h_2015_d___ hei_2015_added_sugars_component_score
## h_2015_prcnt_f_clrs_frm_d_ hei_2015_percent_of_calories_from_added_sugars
## h_2015_d__ hei_2015_dairy_component_score
## h_2015_dnsty_f_d__1000_ hei_2015_density_of_dairy_per_1000_kcal
## h_2015_whl_g__ hei_2015_whole_grains_component_score
## h_2015_dnsty_f_whl_g__1000_ hei_2015_density_of_whole_grains_per_1000_kcal
## dimension
## h_2015_ttl_v__ 1
## h_2015_f___ 1
## h_2015_s___ 1
## h_2015_dnsty_f_ttl_v__1000_ 1
## h_2015_dnsty_f_g____1000_ 1
## h_2015________ 1
## h_2015_f__ 1
## h_2015_prcnt_f_clrs_frm_s_ 1
## h_2015_t____ 2
## h_2015_s__ 2
## h_2015_dnsty_f_t____1000_ 2
## h_2015_dnsty_f_s__1000_ 2
## h_2015_ttl_f__ 3
## h_2015_whl_f__ 3
## h_2015_dnsty_f_ttl_f__1000_ 3
## h_2015_dnsty_f_whl_f__1000_ 3
## h_2015_g____ 4
## h_2015_s_____ 4
## h_2015_r___ 5
## h_2015_dnsty_f_r___1000_ 5
## h_2015_d___ 6
## h_2015_prcnt_f_clrs_frm_d_ 6
## h_2015_d__ 7
## h_2015_dnsty_f_d__1000_ 7
## h_2015_whl_g__ 8
## h_2015_dnsty_f_whl_g__1000_ 8# Descriptive analysis
des.hei <- psych::describe(sga, tr =.2)
print(des.hei, digits=2)## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 32 1.81 0.40 2 2.00 0 1 2 1 -1.53
## sga_diarrhea 2 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_taste 3 32 1.81 0.40 2 2.00 0 1 2 1 -1.53
## sga_nausea 4 32 1.88 0.34 2 2.00 0 1 2 1 -2.16
## sga_dry 5 32 1.97 0.18 2 2.00 0 1 2 1 -5.14
## sga_full 6 32 1.81 0.40 2 2.00 0 1 2 1 -1.53
## sga_vomit 7 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_mouth 8 32 1.91 0.30 2 2.00 0 1 2 1 -2.66
## sga_tired 9 32 1.75 0.44 2 1.90 0 1 2 1 -1.10
## sga_constipation 10 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_smell 11 32 1.91 0.30 2 2.00 0 1 2 1 -2.66
## sga_pain 12 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_other 13 32 1.94 0.25 2 2.00 0 1 2 1 -3.45
## sga_symmpt_score 14 32 2.31 3.81 0 0.95 0 0 15 15 1.72
## kurtosis se
## sga_appetite 0.34 0.07
## sga_diarrhea 10.20 0.04
## sga_taste 0.34 0.07
## sga_nausea 2.76 0.06
## sga_dry 25.18 0.03
## sga_full 0.34 0.07
## sga_vomit 10.20 0.04
## sga_mouth 5.23 0.05
## sga_tired -0.81 0.08
## sga_constipation 10.20 0.04
## sga_smell 5.23 0.05
## sga_pain 10.20 0.04
## sga_other 10.20 0.04
## sga_symmpt_score 2.22 0.67# Descriptive analysis (by Group)
des.heiBy <- psych::describeBy(sga, food$muscle_loss, tr =.2)
print(des.heiBy, digits=2)##
## Descriptive statistics by group
## group: maybe
## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_diarrhea 2 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_taste 3 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_nausea 4 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_dry 5 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_full 6 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_vomit 7 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_mouth 8 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_tired 9 7 1.71 0.49 2 1.8 0.00 1 2 1 -0.75
## sga_constipation 10 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_smell 11 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_pain 12 7 2.00 0.00 2 2.0 0.00 2 2 0 NaN
## sga_other 13 7 1.86 0.38 2 2.0 0.00 1 2 1 -1.62
## sga_symmpt_score 14 7 1.57 2.88 1 0.6 1.48 0 8 8 1.52
## kurtosis se
## sga_appetite 0.80 0.14
## sga_diarrhea NaN 0.00
## sga_taste 0.80 0.14
## sga_nausea 0.80 0.14
## sga_dry NaN 0.00
## sga_full 0.80 0.14
## sga_vomit NaN 0.00
## sga_mouth 0.80 0.14
## sga_tired -1.60 0.18
## sga_constipation NaN 0.00
## sga_smell NaN 0.00
## sga_pain NaN 0.00
## sga_other 0.80 0.14
## sga_symmpt_score 0.59 1.09
## ------------------------------------------------------------
## group: no
## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_diarrhea 2 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_taste 3 12 1.92 0.29 2 2 0 1 2 1 -2.65
## sga_nausea 4 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_dry 5 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_full 6 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_vomit 7 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_mouth 8 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_tired 9 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_constipation 10 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_smell 11 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_pain 12 12 1.92 0.29 2 2 0 1 2 1 -2.65
## sga_other 13 12 2.00 0.00 2 2 0 2 2 0 NaN
## sga_symmpt_score 14 12 0.33 1.15 0 0 0 0 4 4 2.65
## kurtosis se
## sga_appetite NaN 0.00
## sga_diarrhea NaN 0.00
## sga_taste 5.48 0.08
## sga_nausea NaN 0.00
## sga_dry NaN 0.00
## sga_full NaN 0.00
## sga_vomit NaN 0.00
## sga_mouth NaN 0.00
## sga_tired NaN 0.00
## sga_constipation NaN 0.00
## sga_smell NaN 0.00
## sga_pain 5.48 0.08
## sga_other NaN 0.00
## sga_symmpt_score 5.48 0.33
## ------------------------------------------------------------
## group: yes
## vars n mean sd median trimmed mad min max range skew
## sga_appetite 1 13 1.62 0.51 2 1.67 0.00 1 2 1 -0.42
## sga_diarrhea 2 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_taste 3 13 1.69 0.48 2 1.78 0.00 1 2 1 -0.74
## sga_nausea 4 13 1.77 0.44 2 1.89 0.00 1 2 1 -1.13
## sga_dry 5 13 1.92 0.28 2 2.00 0.00 1 2 1 -2.82
## sga_full 6 13 1.62 0.51 2 1.67 0.00 1 2 1 -0.42
## sga_vomit 7 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_mouth 8 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_tired 9 13 1.54 0.52 2 1.56 0.00 1 2 1 -0.14
## sga_constipation 10 13 1.85 0.38 2 2.00 0.00 1 2 1 -1.70
## sga_smell 11 13 1.77 0.44 2 1.89 0.00 1 2 1 -1.13
## sga_pain 12 13 1.92 0.28 2 2.00 0.00 1 2 1 -2.82
## sga_other 13 13 1.92 0.28 2 2.00 0.00 1 2 1 -2.82
## sga_symmpt_score 14 13 4.54 4.75 4 3.67 5.93 0 15 15 0.78
## kurtosis se
## sga_appetite -1.96 0.14
## sga_diarrhea 0.99 0.10
## sga_taste -1.56 0.13
## sga_nausea -0.76 0.12
## sga_dry 6.44 0.08
## sga_full -1.96 0.14
## sga_vomit 0.99 0.10
## sga_mouth 0.99 0.10
## sga_tired -2.13 0.14
## sga_constipation 0.99 0.10
## sga_smell -0.76 0.12
## sga_pain 6.44 0.08
## sga_other 6.44 0.08
## sga_symmpt_score -0.62 1.32Supp subset
Select only Supp_ variables.
supp <- food %>% select(starts_with("supp_"))
# Histograms
plot_histogram(supp)
# Barplots
plot_bar(supp)
# Correlations ordinal (tetrachoric or polychoric)
#supp.cor <- qgraph::cor_auto(supp)
#plot_correlation(supp.cor)
# Correlations linear (Pearson)
plot_correlation(supp)
# Network analysis
#fit.supp <- EGAnet::EGA(supp)
#fit.supp
# Descriptive analysis
des.supp <- psych::describe(supp, tr =.2)
print(des.supp, digits=2)## vars n mean sd median
## supp_energy_kcal_dsid 1 32 4.27 5.45 0.83
## supp_protein_g_dsid 2 32 0.13 0.31 0.00
## supp_total_fat_g_dsid 3 32 0.19 0.38 0.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 4 32 0.02 0.09 0.00
## supp_cholesterol_mg_dsid 5 32 164.15 247.89 0.00
## supp_carbohydrate_g_dsid 6 32 0.56 1.07 0.00
## supp_total_sugars_g_dsid 7 32 0.21 0.64 0.00
## supp_dietary_fiber_g_dsid 8 32 0.39 0.93 0.00
## supp_soluble_dietary_fiber_g_dsid 9 32 0.26 0.62 0.00
## supp_total_vitamin_a_activity_iu_dsid 10 32 799.11 1176.97 0.00
## supp_vitamin_a_rae_mcg_dsid 11 32 239.73 353.09 0.00
## supp_beta_carotene_percent_dsid 12 32 9.56 16.46 0.00
## supp_lutein_zeaxanthin_mcg_dsid 13 32 254.69 1054.11 0.00
## supp_lycopene_mcg_dsid 14 32 62.95 121.70 0.00
## supp_biotin_mcg_dsid 15 32 9.24 12.66 0.00
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 16 32 20.94 57.25 0.00
## supp_vitamin_e_iu_dsid 17 32 31.25 85.45 0.00
## supp_vitamin_k_mcg_dsid 18 32 7.30 12.48 0.00
## supp_vitamin_c_mg_dsid 19 32 155.43 321.04 19.28
## supp_thiamin_vitamin_b1_mg_dsid 20 32 3.50 13.37 0.00
## supp_riboflavin_vitamin_b2_mg_dsid 21 32 1.05 2.68 0.00
## supp_niacin_mg_dsid 22 32 18.82 71.12 0.00
## supp_vitamin_b6_mg_dsid 23 32 0.99 1.37 0.00
## supp_folate_dfe_mcg_dsid 24 32 237.24 299.19 0.00
## supp_folic_acid_mcg_dsid 25 32 139.55 176.00 0.00
## supp_vitamin_b12_mcg_dsid 26 32 69.10 247.68 0.00
## supp_pantothenic_acid_mg_dsid 27 32 3.21 4.40 0.00
## supp_vitamin_d_d2_d3_mcg_dsid 28 32 19.75 19.92 13.39
## supp_boron_mcg_dsid 29 32 42.52 64.43 0.00
## supp_calcium_mg_dsid 30 32 284.47 345.62 195.72
## supp_chloride_mg_dsid 31 32 18.00 30.58 0.00
## supp_chromium_mcg_dsid 32 32 17.28 29.35 0.00
## supp_copper_mg_dsid 33 32 0.15 0.24 0.00
## supp_fluoride_mg_dsid 34 32 0.00 0.00 0.00
## supp_iodine_mcg_dsid 35 32 37.50 63.71 0.00
## supp_iron_mg_dsid 36 32 7.11 35.36 0.00
## supp_magnesium_mg_dsid 37 32 79.65 142.30 0.00
## supp_manganese_mg_dsid 38 32 0.58 0.98 0.00
## supp_molybdenum_mcg_dsid 39 32 13.26 19.57 0.00
## supp_nickel_mcg_dsid 40 32 1.25 2.12 0.00
## supp_phosphorus_mg_dsid 41 32 5.00 8.49 0.00
## supp_potassium_mg_dsid 42 32 24.15 38.61 0.00
## supp_selenium_mcg_dsid 43 32 13.75 23.36 0.00
## supp_silicon_mg_dsid 44 32 0.50 0.85 0.00
## supp_sodium_mg_dsid 45 32 0.08 0.27 0.00
## supp_tin_mcg_dsid 46 32 0.40 1.82 0.00
## supp_vanadium_mcg_dsid 47 32 2.50 4.25 0.00
## supp_zinc_mg_dsid 48 32 5.73 10.91 0.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 49 32 0.04 0.08 0.00
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 50 32 0.02 0.05 0.00
## supp_omega_3_fatty_acids_g_dsid 51 32 0.02 0.09 0.00
## supp_inositol_g_dsid 52 32 0.00 0.00 0.00
## supp_choline_mg_dsid 53 32 0.00 0.01 0.00
## trimmed mad min max
## supp_energy_kcal_dsid 3.04 1.23 0 20.00
## supp_protein_g_dsid 0.00 0.00 0 1.00
## supp_total_fat_g_dsid 0.02 0.00 0 1.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 0.00 0 0.50
## supp_cholesterol_mg_dsid 94.07 0.00 0 800.00
## supp_carbohydrate_g_dsid 0.12 0.00 0 3.00
## supp_total_sugars_g_dsid 0.01 0.00 0 3.00
## supp_dietary_fiber_g_dsid 0.00 0.00 0 3.00
## supp_soluble_dietary_fiber_g_dsid 0.00 0.00 0 2.00
## supp_total_vitamin_a_activity_iu_dsid 478.57 0.00 0 3500.00
## supp_vitamin_a_rae_mcg_dsid 143.57 0.00 0 1050.00
## supp_beta_carotene_percent_dsid 3.29 0.00 0 40.00
## supp_lutein_zeaxanthin_mcg_dsid 43.75 0.00 0 6000.00
## supp_lycopene_mcg_dsid 10.71 0.00 0 300.00
## supp_biotin_mcg_dsid 5.79 0.00 0 30.00
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 5.03 0.00 0 301.50
## supp_vitamin_e_iu_dsid 7.50 0.00 0 450.00
## supp_vitamin_k_mcg_dsid 2.68 0.00 0 30.00
## supp_vitamin_c_mg_dsid 29.03 28.59 0 1060.00
## supp_thiamin_vitamin_b1_mg_dsid 0.30 0.00 0 71.43
## supp_riboflavin_vitamin_b2_mg_dsid 0.34 0.00 0 14.29
## supp_niacin_mg_dsid 4.82 0.00 0 405.71
## supp_vitamin_b6_mg_dsid 0.63 0.00 0 4.00
## supp_folate_dfe_mcg_dsid 175.59 0.00 0 680.00
## supp_folic_acid_mcg_dsid 103.29 0.00 0 400.00
## supp_vitamin_b12_mcg_dsid 4.31 0.00 0 1025.00
## supp_pantothenic_acid_mg_dsid 2.13 0.00 0 10.00
## supp_vitamin_d_d2_d3_mcg_dsid 15.61 19.07 0 62.50
## supp_boron_mcg_dsid 23.04 0.00 0 150.00
## supp_calcium_mg_dsid 189.13 290.17 0 1200.00
## supp_chloride_mg_dsid 7.20 0.00 0 72.00
## supp_chromium_mcg_dsid 8.36 0.00 0 120.00
## supp_copper_mg_dsid 0.07 0.00 0 0.80
## supp_fluoride_mg_dsid 0.00 0.00 0 0.00
## supp_iodine_mcg_dsid 15.00 0.00 0 150.00
## supp_iron_mg_dsid 0.00 0.00 0 200.00
## supp_magnesium_mg_dsid 23.90 0.00 0 500.00
## supp_manganese_mg_dsid 0.23 0.00 0 2.30
## supp_molybdenum_mcg_dsid 7.71 0.00 0 45.00
## supp_nickel_mcg_dsid 0.50 0.00 0 5.00
## supp_phosphorus_mg_dsid 2.00 0.00 0 20.00
## supp_potassium_mg_dsid 10.57 0.00 0 110.00
## supp_selenium_mcg_dsid 5.50 0.00 0 55.00
## supp_silicon_mg_dsid 0.20 0.00 0 2.00
## supp_sodium_mg_dsid 0.00 0.00 0 1.43
## supp_tin_mcg_dsid 0.00 0.00 0 10.00
## supp_vanadium_mcg_dsid 1.00 0.00 0 10.00
## supp_zinc_mg_dsid 2.74 0.00 0 50.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.00 0.00 0 0.33
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.00 0.00 0 0.17
## supp_omega_3_fatty_acids_g_dsid 0.00 0.00 0 0.50
## supp_inositol_g_dsid 0.00 0.00 0 0.00
## supp_choline_mg_dsid 0.00 0.00 0 0.04
## range skew kurtosis se
## supp_energy_kcal_dsid 20.00 1.03 0.10 0.96
## supp_protein_g_dsid 1.00 1.94 2.06 0.05
## supp_total_fat_g_dsid 1.00 1.52 0.44 0.07
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.50 5.14 25.18 0.02
## supp_cholesterol_mg_dsid 800.00 0.98 -0.63 43.82
## supp_carbohydrate_g_dsid 3.00 1.42 0.21 0.19
## supp_total_sugars_g_dsid 3.00 3.40 10.68 0.11
## supp_dietary_fiber_g_dsid 3.00 1.93 2.05 0.16
## supp_soluble_dietary_fiber_g_dsid 2.00 1.93 2.04 0.11
## supp_total_vitamin_a_activity_iu_dsid 3500.00 0.87 -1.01 208.06
## supp_vitamin_a_rae_mcg_dsid 1050.00 0.87 -1.01 62.42
## supp_beta_carotene_percent_dsid 40.00 1.14 -0.61 2.91
## supp_lutein_zeaxanthin_mcg_dsid 6000.00 5.05 24.58 186.34
## supp_lycopene_mcg_dsid 300.00 1.34 -0.17 21.51
## supp_biotin_mcg_dsid 30.00 0.79 -1.20 2.24
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 301.50 3.89 15.51 10.12
## supp_vitamin_e_iu_dsid 450.00 3.89 15.51 15.11
## supp_vitamin_k_mcg_dsid 30.00 1.12 -0.69 2.21
## supp_vitamin_c_mg_dsid 1060.00 2.05 2.57 56.75
## supp_thiamin_vitamin_b1_mg_dsid 71.43 4.29 18.20 2.36
## supp_riboflavin_vitamin_b2_mg_dsid 14.29 3.87 15.78 0.47
## supp_niacin_mg_dsid 405.71 5.02 24.37 12.57
## supp_vitamin_b6_mg_dsid 4.00 0.81 -1.11 0.24
## supp_folate_dfe_mcg_dsid 680.00 0.58 -1.53 52.89
## supp_folic_acid_mcg_dsid 400.00 0.58 -1.53 31.11
## supp_vitamin_b12_mcg_dsid 1025.00 3.44 10.17 43.78
## supp_pantothenic_acid_mg_dsid 10.00 0.74 -1.36 0.78
## supp_vitamin_d_d2_d3_mcg_dsid 62.50 0.79 -0.62 3.52
## supp_boron_mcg_dsid 150.00 0.89 -1.12 11.39
## supp_calcium_mg_dsid 1200.00 1.28 0.69 61.10
## supp_chloride_mg_dsid 72.00 1.10 -0.74 5.41
## supp_chromium_mcg_dsid 120.00 1.77 2.85 5.19
## supp_copper_mg_dsid 0.80 1.12 -0.31 0.04
## supp_fluoride_mg_dsid 0.00 NaN NaN 0.00
## supp_iodine_mcg_dsid 150.00 1.10 -0.74 11.26
## supp_iron_mg_dsid 200.00 5.07 24.69 6.25
## supp_magnesium_mg_dsid 500.00 1.78 1.91 25.16
## supp_manganese_mg_dsid 2.30 1.10 -0.74 0.17
## supp_molybdenum_mcg_dsid 45.00 0.83 -1.24 3.46
## supp_nickel_mcg_dsid 5.00 1.10 -0.74 0.38
## supp_phosphorus_mg_dsid 20.00 1.10 -0.74 1.50
## supp_potassium_mg_dsid 110.00 1.18 -0.31 6.82
## supp_selenium_mcg_dsid 55.00 1.10 -0.74 4.13
## supp_silicon_mg_dsid 2.00 1.10 -0.74 0.15
## supp_sodium_mg_dsid 1.43 4.10 17.20 0.05
## supp_tin_mcg_dsid 10.00 4.63 21.12 0.32
## supp_vanadium_mcg_dsid 10.00 1.10 -0.74 0.75
## supp_zinc_mg_dsid 50.00 2.61 7.09 1.93
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.33 1.98 3.07 0.01
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.17 1.66 1.15 0.01
## supp_omega_3_fatty_acids_g_dsid 0.50 5.14 25.18 0.02
## supp_inositol_g_dsid 0.00 NaN NaN 0.00
## supp_choline_mg_dsid 0.04 3.57 11.41 0.00# Descriptive analysis (by Group)
des.suppBy <- psych::describeBy(supp, food$muscle_loss, tr =.2)
print(des.suppBy, digits=2)##
## Descriptive statistics by group
## group: maybe
## vars n mean sd median
## supp_energy_kcal_dsid 1 7 8.03 5.66 10.00
## supp_protein_g_dsid 2 7 0.14 0.38 0.00
## supp_total_fat_g_dsid 3 7 0.29 0.49 0.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 4 7 0.07 0.19 0.00
## supp_cholesterol_mg_dsid 5 7 285.10 331.84 114.29
## supp_carbohydrate_g_dsid 6 7 1.16 1.48 0.00
## supp_total_sugars_g_dsid 7 7 0.75 1.28 0.00
## supp_dietary_fiber_g_dsid 8 7 0.43 1.13 0.00
## supp_soluble_dietary_fiber_g_dsid 9 7 0.29 0.76 0.00
## supp_total_vitamin_a_activity_iu_dsid 10 7 1112.24 1156.80 1000.00
## supp_vitamin_a_rae_mcg_dsid 11 7 333.67 347.04 300.00
## supp_beta_carotene_percent_dsid 12 7 6.90 14.92 0.00
## supp_lutein_zeaxanthin_mcg_dsid 13 7 960.20 2225.71 196.43
## supp_lycopene_mcg_dsid 14 7 42.86 113.39 0.00
## supp_biotin_mcg_dsid 15 7 9.18 10.98 8.57
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 16 7 27.22 48.44 7.21
## supp_vitamin_e_iu_dsid 17 7 40.61 72.31 10.71
## supp_vitamin_k_mcg_dsid 18 7 5.31 11.21 0.00
## supp_vitamin_c_mg_dsid 19 7 50.65 79.97 21.43
## supp_thiamin_vitamin_b1_mg_dsid 20 7 0.28 0.56 0.00
## supp_riboflavin_vitamin_b2_mg_dsid 21 7 0.31 0.64 0.00
## supp_niacin_mg_dsid 22 7 63.26 151.18 7.14
## supp_vitamin_b6_mg_dsid 23 7 1.49 1.73 0.57
## supp_folate_dfe_mcg_dsid 24 7 335.14 290.36 306.00
## supp_folic_acid_mcg_dsid 25 7 197.14 170.80 180.00
## supp_vitamin_b12_mcg_dsid 26 7 6.75 9.36 1.71
## supp_pantothenic_acid_mg_dsid 27 7 4.29 4.67 2.86
## supp_vitamin_d_d2_d3_mcg_dsid 28 7 23.21 17.66 20.00
## supp_boron_mcg_dsid 29 7 61.22 71.53 21.43
## supp_calcium_mg_dsid 30 7 130.99 232.48 13.27
## supp_chloride_mg_dsid 31 7 13.22 27.03 0.00
## supp_chromium_mcg_dsid 32 7 37.24 48.58 10.00
## supp_copper_mg_dsid 33 7 0.21 0.32 0.00
## supp_fluoride_mg_dsid 34 7 0.00 0.00 0.00
## supp_iodine_mcg_dsid 35 7 27.55 56.31 0.00
## supp_iron_mg_dsid 36 7 0.73 1.94 0.00
## supp_magnesium_mg_dsid 37 7 9.18 18.77 0.00
## supp_manganese_mg_dsid 38 7 0.42 0.86 0.00
## supp_molybdenum_mcg_dsid 39 7 17.45 19.07 12.86
## supp_nickel_mcg_dsid 40 7 0.92 1.88 0.00
## supp_phosphorus_mg_dsid 41 7 3.67 7.51 0.00
## supp_potassium_mg_dsid 42 7 18.98 41.03 0.00
## supp_selenium_mcg_dsid 43 7 10.10 20.65 0.00
## supp_silicon_mg_dsid 44 7 0.37 0.75 0.00
## supp_sodium_mg_dsid 45 7 0.00 0.00 0.00
## supp_tin_mcg_dsid 46 7 0.41 1.08 0.00
## supp_vanadium_mcg_dsid 47 7 1.84 3.75 0.00
## supp_zinc_mg_dsid 48 7 6.99 12.91 0.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 49 7 0.07 0.13 0.00
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 50 7 0.04 0.07 0.00
## supp_omega_3_fatty_acids_g_dsid 51 7 0.07 0.19 0.00
## supp_inositol_g_dsid 52 7 0.00 0.00 0.00
## supp_choline_mg_dsid 53 7 0.01 0.02 0.00
## trimmed mad min max
## supp_energy_kcal_dsid 8.24 1.30 0.00 15.00
## supp_protein_g_dsid 0.00 0.00 0.00 1.00
## supp_total_fat_g_dsid 0.20 0.00 0.00 1.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 0.00 0.00 0.50
## supp_cholesterol_mg_dsid 239.14 169.45 0.00 800.00
## supp_carbohydrate_g_dsid 1.03 0.00 0.00 3.00
## supp_total_sugars_g_dsid 0.45 0.00 0.00 3.00
## supp_dietary_fiber_g_dsid 0.00 0.00 0.00 3.00
## supp_soluble_dietary_fiber_g_dsid 0.00 0.00 0.00 2.00
## supp_total_vitamin_a_activity_iu_dsid 1057.14 1482.60 0.00 2500.00
## supp_vitamin_a_rae_mcg_dsid 317.14 444.78 0.00 750.00
## supp_beta_carotene_percent_dsid 1.66 0.00 0.00 40.00
## supp_lutein_zeaxanthin_mcg_dsid 144.29 291.23 0.00 6000.00
## supp_lycopene_mcg_dsid 0.00 0.00 0.00 300.00
## supp_biotin_mcg_dsid 6.86 12.71 0.00 30.00
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 11.31 10.69 0.00 134.00
## supp_vitamin_e_iu_dsid 16.86 15.88 0.00 200.00
## supp_vitamin_k_mcg_dsid 1.43 0.00 0.00 30.00
## supp_vitamin_c_mg_dsid 25.71 31.77 0.00 226.00
## supp_thiamin_vitamin_b1_mg_dsid 0.09 0.00 0.00 1.50
## supp_riboflavin_vitamin_b2_mg_dsid 0.10 0.00 0.00 1.70
## supp_niacin_mg_dsid 7.43 10.59 0.00 405.71
## supp_vitamin_b6_mg_dsid 1.29 0.85 0.00 4.00
## supp_folate_dfe_mcg_dsid 333.20 453.68 0.00 680.00
## supp_folic_acid_mcg_dsid 196.00 266.87 0.00 400.00
## supp_vitamin_b12_mcg_dsid 4.46 2.54 0.00 25.00
## supp_pantothenic_acid_mg_dsid 4.00 4.24 0.00 10.00
## supp_vitamin_d_d2_d3_mcg_dsid 19.36 8.47 5.71 60.00
## supp_boron_mcg_dsid 55.71 31.77 0.00 150.00
## supp_calcium_mg_dsid 58.08 19.67 0.00 626.55
## supp_chloride_mg_dsid 4.11 0.00 0.00 72.00
## supp_chromium_mcg_dsid 28.14 14.83 0.00 120.00
## supp_copper_mg_dsid 0.13 0.00 0.00 0.80
## supp_fluoride_mg_dsid 0.00 0.00 0.00 0.00
## supp_iodine_mcg_dsid 8.57 0.00 0.00 150.00
## supp_iron_mg_dsid 0.00 0.00 0.00 5.14
## supp_magnesium_mg_dsid 2.86 0.00 0.00 50.00
## supp_manganese_mg_dsid 0.13 0.00 0.00 2.30
## supp_molybdenum_mcg_dsid 15.43 19.07 0.00 45.00
## supp_nickel_mcg_dsid 0.29 0.00 0.00 5.00
## supp_phosphorus_mg_dsid 1.14 0.00 0.00 20.00
## supp_potassium_mg_dsid 4.57 0.00 0.00 110.00
## supp_selenium_mcg_dsid 3.14 0.00 0.00 55.00
## supp_silicon_mg_dsid 0.11 0.00 0.00 2.00
## supp_sodium_mg_dsid 0.00 0.00 0.00 0.00
## supp_tin_mcg_dsid 0.00 0.00 0.00 2.86
## supp_vanadium_mcg_dsid 0.57 0.00 0.00 10.00
## supp_zinc_mg_dsid 2.83 0.00 0.00 34.80
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.04 0.00 0.00 0.33
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.02 0.00 0.00 0.17
## supp_omega_3_fatty_acids_g_dsid 0.00 0.00 0.00 0.50
## supp_inositol_g_dsid 0.00 0.00 0.00 0.00
## supp_choline_mg_dsid 0.01 0.00 0.00 0.04
## range skew kurtosis se
## supp_energy_kcal_dsid 15.00 -0.46 -1.59 2.14
## supp_protein_g_dsid 1.00 1.62 0.80 0.14
## supp_total_fat_g_dsid 1.00 0.75 -1.60 0.18
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.50 1.62 0.80 0.07
## supp_cholesterol_mg_dsid 800.00 0.38 -1.83 125.42
## supp_carbohydrate_g_dsid 3.00 0.31 -2.07 0.56
## supp_total_sugars_g_dsid 3.00 0.84 -1.33 0.48
## supp_dietary_fiber_g_dsid 3.00 1.62 0.80 0.43
## supp_soluble_dietary_fiber_g_dsid 2.00 1.62 0.80 0.29
## supp_total_vitamin_a_activity_iu_dsid 2500.00 0.14 -2.03 437.23
## supp_vitamin_a_rae_mcg_dsid 750.00 0.14 -2.03 131.17
## supp_beta_carotene_percent_dsid 40.00 1.49 0.49 5.64
## supp_lutein_zeaxanthin_mcg_dsid 6000.00 1.61 0.78 841.24
## supp_lycopene_mcg_dsid 300.00 1.62 0.80 42.86
## supp_biotin_mcg_dsid 30.00 0.75 -0.93 4.15
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 134.00 1.45 0.41 18.31
## supp_vitamin_e_iu_dsid 200.00 1.45 0.41 27.33
## supp_vitamin_k_mcg_dsid 30.00 1.45 0.40 4.24
## supp_vitamin_c_mg_dsid 226.00 1.41 0.36 30.22
## supp_thiamin_vitamin_b1_mg_dsid 1.50 1.39 0.23 0.21
## supp_riboflavin_vitamin_b2_mg_dsid 1.70 1.38 0.23 0.24
## supp_niacin_mg_dsid 405.71 1.61 0.78 57.14
## supp_vitamin_b6_mg_dsid 4.00 0.31 -1.98 0.65
## supp_folate_dfe_mcg_dsid 680.00 0.04 -1.91 109.75
## supp_folic_acid_mcg_dsid 400.00 0.04 -1.91 64.56
## supp_vitamin_b12_mcg_dsid 25.00 0.90 -0.80 3.54
## supp_pantothenic_acid_mg_dsid 10.00 0.22 -2.03 1.76
## supp_vitamin_d_d2_d3_mcg_dsid 54.29 1.10 -0.14 6.67
## supp_boron_mcg_dsid 150.00 0.29 -2.05 27.04
## supp_calcium_mg_dsid 626.55 1.29 0.01 87.87
## supp_chloride_mg_dsid 72.00 1.39 0.24 10.22
## supp_chromium_mcg_dsid 120.00 0.63 -1.49 18.36
## supp_copper_mg_dsid 0.80 0.88 -1.09 0.12
## supp_fluoride_mg_dsid 0.00 NaN NaN 0.00
## supp_iodine_mcg_dsid 150.00 1.39 0.24 21.28
## supp_iron_mg_dsid 5.14 1.62 0.80 0.73
## supp_magnesium_mg_dsid 50.00 1.39 0.24 7.09
## supp_manganese_mg_dsid 2.30 1.39 0.23 0.33
## supp_molybdenum_mcg_dsid 45.00 0.28 -1.89 7.21
## supp_nickel_mcg_dsid 5.00 1.39 0.24 0.71
## supp_phosphorus_mg_dsid 20.00 1.39 0.24 2.84
## supp_potassium_mg_dsid 110.00 1.49 0.49 15.51
## supp_selenium_mcg_dsid 55.00 1.39 0.24 7.80
## supp_silicon_mg_dsid 2.00 1.39 0.24 0.28
## supp_sodium_mg_dsid 0.00 NaN NaN 0.00
## supp_tin_mcg_dsid 2.86 1.62 0.80 0.41
## supp_vanadium_mcg_dsid 10.00 1.39 0.24 1.42
## supp_zinc_mg_dsid 34.80 1.34 0.13 4.88
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.33 1.02 -0.80 0.05
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.17 0.86 -1.29 0.03
## supp_omega_3_fatty_acids_g_dsid 0.50 1.62 0.80 0.07
## supp_inositol_g_dsid 0.00 NaN NaN 0.00
## supp_choline_mg_dsid 0.04 0.82 -1.38 0.01
## ------------------------------------------------------------
## group: no
## vars n mean sd median
## supp_energy_kcal_dsid 1 12 2.10 3.53 0.00
## supp_protein_g_dsid 2 12 0.18 0.32 0.00
## supp_total_fat_g_dsid 3 12 0.01 0.02 0.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 4 12 0.00 0.00 0.00
## supp_cholesterol_mg_dsid 5 12 158.33 235.33 0.00
## supp_carbohydrate_g_dsid 6 12 0.54 0.97 0.00
## supp_total_sugars_g_dsid 7 12 0.05 0.10 0.00
## supp_dietary_fiber_g_dsid 8 12 0.54 0.97 0.00
## supp_soluble_dietary_fiber_g_dsid 9 12 0.36 0.65 0.00
## supp_total_vitamin_a_activity_iu_dsid 10 12 916.67 1378.95 0.00
## supp_vitamin_a_rae_mcg_dsid 11 12 275.00 413.69 0.00
## supp_beta_carotene_percent_dsid 12 12 12.42 18.56 0.00
## supp_lutein_zeaxanthin_mcg_dsid 13 12 62.50 113.07 0.00
## supp_lycopene_mcg_dsid 14 12 75.00 135.68 0.00
## supp_biotin_mcg_dsid 15 12 12.50 14.33 4.28
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 16 12 10.05 15.25 0.00
## supp_vitamin_e_iu_dsid 17 12 15.00 22.76 0.00
## supp_vitamin_k_mcg_dsid 18 12 9.58 14.22 0.00
## supp_vitamin_c_mg_dsid 19 12 180.89 360.36 30.00
## supp_thiamin_vitamin_b1_mg_dsid 20 12 8.83 21.30 0.75
## supp_riboflavin_vitamin_b2_mg_dsid 21 12 2.23 4.14 0.85
## supp_niacin_mg_dsid 22 12 8.75 9.78 3.57
## supp_vitamin_b6_mg_dsid 23 12 1.08 1.32 0.28
## supp_folate_dfe_mcg_dsid 24 12 283.33 324.73 97.14
## supp_folic_acid_mcg_dsid 25 12 166.67 191.02 57.15
## supp_vitamin_b12_mcg_dsid 26 12 91.33 294.18 2.14
## supp_pantothenic_acid_mg_dsid 27 12 3.79 4.72 0.78
## supp_vitamin_d_d2_d3_mcg_dsid 28 12 21.55 20.99 18.75
## supp_boron_mcg_dsid 29 12 43.75 67.53 0.00
## supp_calcium_mg_dsid 30 12 370.64 383.37 258.90
## supp_chloride_mg_dsid 31 12 24.00 35.45 0.00
## supp_chromium_mcg_dsid 32 12 14.17 21.09 0.00
## supp_copper_mg_dsid 33 12 0.17 0.25 0.00
## supp_fluoride_mg_dsid 34 12 0.00 0.00 0.00
## supp_iodine_mcg_dsid 35 12 50.00 73.85 0.00
## supp_iron_mg_dsid 36 12 1.86 5.23 0.00
## supp_magnesium_mg_dsid 37 12 133.66 178.60 50.00
## supp_manganese_mg_dsid 38 12 0.77 1.13 0.00
## supp_molybdenum_mcg_dsid 39 12 15.00 22.16 0.00
## supp_nickel_mcg_dsid 40 12 1.67 2.46 0.00
## supp_phosphorus_mg_dsid 41 12 6.67 9.85 0.00
## supp_potassium_mg_dsid 42 12 32.02 40.56 10.71
## supp_selenium_mcg_dsid 43 12 18.33 27.08 0.00
## supp_silicon_mg_dsid 44 12 0.67 0.98 0.00
## supp_sodium_mg_dsid 45 12 0.07 0.16 0.00
## supp_tin_mcg_dsid 46 12 0.83 2.89 0.00
## supp_vanadium_mcg_dsid 47 12 3.33 4.92 0.00
## supp_zinc_mg_dsid 48 12 4.56 5.63 0.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 49 12 0.00 0.00 0.00
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 50 12 0.00 0.00 0.00
## supp_omega_3_fatty_acids_g_dsid 51 12 0.00 0.00 0.00
## supp_inositol_g_dsid 52 12 0.00 0.00 0.00
## supp_choline_mg_dsid 53 12 0.00 0.00 0.00
## trimmed mad min max
## supp_energy_kcal_dsid 1.10 0.00 0 9.24
## supp_protein_g_dsid 0.09 0.00 0 0.71
## supp_total_fat_g_dsid 0.00 0.00 0 0.07
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 0.00 0 0.00
## supp_cholesterol_mg_dsid 112.50 0.00 0 500.00
## supp_carbohydrate_g_dsid 0.27 0.00 0 2.14
## supp_total_sugars_g_dsid 0.02 0.00 0 0.29
## supp_dietary_fiber_g_dsid 0.27 0.00 0 2.14
## supp_soluble_dietary_fiber_g_dsid 0.18 0.00 0 1.43
## supp_total_vitamin_a_activity_iu_dsid 625.00 0.00 0 3500.00
## supp_vitamin_a_rae_mcg_dsid 187.50 0.00 0 1050.00
## supp_beta_carotene_percent_dsid 8.62 0.00 0 40.00
## supp_lutein_zeaxanthin_mcg_dsid 31.25 0.00 0 250.00
## supp_lycopene_mcg_dsid 37.50 0.00 0 300.00
## supp_biotin_mcg_dsid 11.25 6.35 0 30.00
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 6.70 0.00 0 33.50
## supp_vitamin_e_iu_dsid 10.00 0.00 0 50.00
## supp_vitamin_k_mcg_dsid 6.88 0.00 0 30.00
## supp_vitamin_c_mg_dsid 36.15 44.48 0 1060.00
## supp_thiamin_vitamin_b1_mg_dsid 0.75 1.11 0 71.43
## supp_riboflavin_vitamin_b2_mg_dsid 0.85 1.26 0 14.29
## supp_niacin_mg_dsid 8.12 5.29 0 20.00
## supp_vitamin_b6_mg_dsid 0.88 0.42 0 3.00
## supp_folate_dfe_mcg_dsid 255.00 144.03 0 680.00
## supp_folic_acid_mcg_dsid 150.00 84.72 0 400.00
## supp_vitamin_b12_mcg_dsid 5.75 3.18 0 1025.00
## supp_pantothenic_acid_mg_dsid 3.19 1.16 0 10.00
## supp_vitamin_d_d2_d3_mcg_dsid 18.57 27.49 0 60.00
## supp_boron_mcg_dsid 28.12 0.00 0 150.00
## supp_calcium_mg_dsid 298.49 370.65 0 1200.00
## supp_chloride_mg_dsid 18.00 0.00 0 72.00
## supp_chromium_mcg_dsid 10.00 0.00 0 45.00
## supp_copper_mg_dsid 0.12 0.00 0 0.50
## supp_fluoride_mg_dsid 0.00 0.00 0 0.00
## supp_iodine_mcg_dsid 37.50 0.00 0 150.00
## supp_iron_mg_dsid 0.00 0.00 0 18.00
## supp_magnesium_mg_dsid 81.73 74.13 0 500.00
## supp_manganese_mg_dsid 0.58 0.00 0 2.30
## supp_molybdenum_mcg_dsid 11.25 0.00 0 45.00
## supp_nickel_mcg_dsid 1.25 0.00 0 5.00
## supp_phosphorus_mg_dsid 5.00 0.00 0 20.00
## supp_potassium_mg_dsid 25.36 15.89 0 101.43
## supp_selenium_mcg_dsid 13.75 0.00 0 55.00
## supp_silicon_mg_dsid 0.50 0.00 0 2.00
## supp_sodium_mg_dsid 0.00 0.00 0 0.50
## supp_tin_mcg_dsid 0.00 0.00 0 10.00
## supp_vanadium_mcg_dsid 2.50 0.00 0 10.00
## supp_zinc_mg_dsid 4.09 0.00 0 11.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.00 0.00 0 0.01
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.00 0.00 0 0.01
## supp_omega_3_fatty_acids_g_dsid 0.00 0.00 0 0.00
## supp_inositol_g_dsid 0.00 0.00 0 0.00
## supp_choline_mg_dsid 0.00 0.00 0 0.00
## range skew kurtosis se
## supp_energy_kcal_dsid 9.24 1.06 -0.81 1.02
## supp_protein_g_dsid 0.71 1.01 -1.04 0.09
## supp_total_fat_g_dsid 0.07 2.65 5.48 0.01
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 NaN NaN 0.00
## supp_cholesterol_mg_dsid 500.00 0.65 -1.66 67.93
## supp_carbohydrate_g_dsid 2.14 1.01 -1.04 0.28
## supp_total_sugars_g_dsid 0.29 1.35 0.24 0.03
## supp_dietary_fiber_g_dsid 2.14 1.01 -1.04 0.28
## supp_soluble_dietary_fiber_g_dsid 1.43 1.01 -1.04 0.19
## supp_total_vitamin_a_activity_iu_dsid 3500.00 0.73 -1.41 398.07
## supp_vitamin_a_rae_mcg_dsid 1050.00 0.73 -1.41 119.42
## supp_beta_carotene_percent_dsid 40.00 0.68 -1.60 5.36
## supp_lutein_zeaxanthin_mcg_dsid 250.00 1.01 -1.04 32.64
## supp_lycopene_mcg_dsid 300.00 1.01 -1.04 39.17
## supp_biotin_mcg_dsid 30.00 0.29 -1.96 4.14
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 33.50 0.74 -1.46 4.40
## supp_vitamin_e_iu_dsid 50.00 0.74 -1.46 6.57
## supp_vitamin_k_mcg_dsid 30.00 0.64 -1.68 4.10
## supp_vitamin_c_mg_dsid 1060.00 1.60 0.82 104.03
## supp_thiamin_vitamin_b1_mg_dsid 71.43 2.13 3.30 6.15
## supp_riboflavin_vitamin_b2_mg_dsid 14.29 2.03 3.08 1.20
## supp_niacin_mg_dsid 20.00 0.22 -2.03 2.82
## supp_vitamin_b6_mg_dsid 3.00 0.51 -1.66 0.38
## supp_folate_dfe_mcg_dsid 680.00 0.29 -1.95 93.74
## supp_folic_acid_mcg_dsid 400.00 0.29 -1.95 55.14
## supp_vitamin_b12_mcg_dsid 1025.00 2.64 5.46 84.92
## supp_pantothenic_acid_mg_dsid 10.00 0.49 -1.79 1.36
## supp_vitamin_d_d2_d3_mcg_dsid 60.00 0.43 -1.36 6.06
## supp_boron_mcg_dsid 150.00 0.80 -1.35 19.49
## supp_calcium_mg_dsid 1200.00 0.81 -0.64 110.67
## supp_chloride_mg_dsid 72.00 0.62 -1.74 10.23
## supp_chromium_mcg_dsid 45.00 0.66 -1.64 6.09
## supp_copper_mg_dsid 0.50 0.62 -1.74 0.07
## supp_fluoride_mg_dsid 0.00 NaN NaN 0.00
## supp_iodine_mcg_dsid 150.00 0.62 -1.74 21.32
## supp_iron_mg_dsid 18.00 2.42 4.57 1.51
## supp_magnesium_mg_dsid 500.00 1.01 -0.56 51.56
## supp_manganese_mg_dsid 2.30 0.62 -1.74 0.33
## supp_molybdenum_mcg_dsid 45.00 0.62 -1.74 6.40
## supp_nickel_mcg_dsid 5.00 0.62 -1.74 0.71
## supp_phosphorus_mg_dsid 20.00 0.62 -1.74 2.84
## supp_potassium_mg_dsid 101.43 0.58 -1.60 11.71
## supp_selenium_mcg_dsid 55.00 0.62 -1.74 7.82
## supp_silicon_mg_dsid 2.00 0.62 -1.74 0.28
## supp_sodium_mg_dsid 0.50 1.72 1.34 0.05
## supp_tin_mcg_dsid 10.00 2.65 5.48 0.83
## supp_vanadium_mcg_dsid 10.00 0.62 -1.74 1.42
## supp_zinc_mg_dsid 11.00 0.30 -2.06 1.63
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.01 2.65 5.48 0.00
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.01 2.65 5.48 0.00
## supp_omega_3_fatty_acids_g_dsid 0.00 NaN NaN 0.00
## supp_inositol_g_dsid 0.00 NaN NaN 0.00
## supp_choline_mg_dsid 0.00 NaN NaN 0.00
## ------------------------------------------------------------
## group: yes
## vars n mean sd median
## supp_energy_kcal_dsid 1 13 4.25 6.03 2.09
## supp_protein_g_dsid 2 13 0.08 0.28 0.00
## supp_total_fat_g_dsid 3 13 0.31 0.44 0.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 4 13 0.00 0.00 0.00
## supp_cholesterol_mg_dsid 5 13 104.40 201.22 0.00
## supp_carbohydrate_g_dsid 6 13 0.25 0.83 0.00
## supp_total_sugars_g_dsid 7 13 0.07 0.17 0.00
## supp_dietary_fiber_g_dsid 8 13 0.25 0.83 0.00
## supp_soluble_dietary_fiber_g_dsid 9 13 0.16 0.55 0.00
## supp_total_vitamin_a_activity_iu_dsid 10 13 521.98 1006.10 0.00
## supp_vitamin_a_rae_mcg_dsid 11 13 156.59 301.83 0.00
## supp_beta_carotene_percent_dsid 12 13 8.35 16.10 0.00
## supp_lutein_zeaxanthin_mcg_dsid 13 13 52.20 100.61 0.00
## supp_lycopene_mcg_dsid 14 13 62.64 120.73 0.00
## supp_biotin_mcg_dsid 15 13 6.26 12.07 0.00
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 16 13 27.61 83.01 0.00
## supp_vitamin_e_iu_dsid 17 13 41.21 123.89 0.00
## supp_vitamin_k_mcg_dsid 18 13 6.26 12.07 0.00
## supp_vitamin_c_mg_dsid 19 13 188.35 368.50 0.00
## supp_thiamin_vitamin_b1_mg_dsid 20 13 0.31 0.60 0.00
## supp_riboflavin_vitamin_b2_mg_dsid 21 13 0.35 0.68 0.00
## supp_niacin_mg_dsid 22 13 4.18 8.05 0.00
## supp_vitamin_b6_mg_dsid 23 13 0.63 1.21 0.00
## supp_folate_dfe_mcg_dsid 24 13 141.98 273.66 0.00
## supp_folic_acid_mcg_dsid 25 13 83.52 160.98 0.00
## supp_vitamin_b12_mcg_dsid 26 13 82.14 275.96 0.00
## supp_pantothenic_acid_mg_dsid 27 13 2.09 4.02 0.00
## supp_vitamin_d_d2_d3_mcg_dsid 28 13 16.24 21.02 7.14
## supp_boron_mcg_dsid 29 13 31.32 60.37 0.00
## supp_calcium_mg_dsid 30 13 287.58 354.48 171.43
## supp_chloride_mg_dsid 31 13 15.03 28.98 0.00
## supp_chromium_mcg_dsid 32 13 9.40 18.11 0.00
## supp_copper_mg_dsid 33 13 0.10 0.20 0.00
## supp_fluoride_mg_dsid 34 13 0.00 0.00 0.00
## supp_iodine_mcg_dsid 35 13 31.32 60.37 0.00
## supp_iron_mg_dsid 36 13 15.38 55.47 0.00
## supp_magnesium_mg_dsid 37 13 67.75 130.11 0.00
## supp_manganese_mg_dsid 38 13 0.48 0.93 0.00
## supp_molybdenum_mcg_dsid 39 13 9.40 18.11 0.00
## supp_nickel_mcg_dsid 40 13 1.04 2.01 0.00
## supp_phosphorus_mg_dsid 41 13 4.18 8.05 0.00
## supp_potassium_mg_dsid 42 13 19.67 37.43 0.00
## supp_selenium_mcg_dsid 43 13 11.48 22.13 0.00
## supp_silicon_mg_dsid 44 13 0.42 0.81 0.00
## supp_sodium_mg_dsid 45 13 0.12 0.40 0.00
## supp_tin_mcg_dsid 46 13 0.00 0.00 0.00
## supp_vanadium_mcg_dsid 47 13 2.09 4.02 0.00
## supp_zinc_mg_dsid 48 13 6.14 13.88 0.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 49 13 0.06 0.08 0.00
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 50 13 0.04 0.05 0.00
## supp_omega_3_fatty_acids_g_dsid 51 13 0.00 0.00 0.00
## supp_inositol_g_dsid 52 13 0.00 0.00 0.00
## supp_choline_mg_dsid 53 13 0.00 0.00 0.00
## trimmed mad min max
## supp_energy_kcal_dsid 2.81 3.10 0 20.00
## supp_protein_g_dsid 0.00 0.00 0 1.00
## supp_total_fat_g_dsid 0.22 0.00 0 1.00
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 0.00 0 0.00
## supp_cholesterol_mg_dsid 39.68 0.00 0 500.00
## supp_carbohydrate_g_dsid 0.00 0.00 0 3.00
## supp_total_sugars_g_dsid 0.01 0.00 0 0.57
## supp_dietary_fiber_g_dsid 0.00 0.00 0 3.00
## supp_soluble_dietary_fiber_g_dsid 0.00 0.00 0 2.00
## supp_total_vitamin_a_activity_iu_dsid 198.41 0.00 0 2500.00
## supp_vitamin_a_rae_mcg_dsid 59.52 0.00 0 750.00
## supp_beta_carotene_percent_dsid 3.17 0.00 0 40.00
## supp_lutein_zeaxanthin_mcg_dsid 19.84 0.00 0 250.00
## supp_lycopene_mcg_dsid 23.81 0.00 0 300.00
## supp_biotin_mcg_dsid 2.38 0.00 0 30.00
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 2.66 0.00 0 301.50
## supp_vitamin_e_iu_dsid 3.97 0.00 0 450.00
## supp_vitamin_k_mcg_dsid 2.38 0.00 0 30.00
## supp_vitamin_c_mg_dsid 49.84 0.00 0 1000.00
## supp_thiamin_vitamin_b1_mg_dsid 0.12 0.00 0 1.50
## supp_riboflavin_vitamin_b2_mg_dsid 0.13 0.00 0 1.70
## supp_niacin_mg_dsid 1.59 0.00 0 20.00
## supp_vitamin_b6_mg_dsid 0.24 0.00 0 3.00
## supp_folate_dfe_mcg_dsid 53.97 0.00 0 680.00
## supp_folic_acid_mcg_dsid 31.75 0.00 0 400.00
## supp_vitamin_b12_mcg_dsid 4.76 0.00 0 1000.00
## supp_pantothenic_acid_mg_dsid 0.79 0.00 0 10.00
## supp_vitamin_d_d2_d3_mcg_dsid 10.95 10.59 0 62.50
## supp_boron_mcg_dsid 11.90 0.00 0 150.00
## supp_calcium_mg_dsid 202.69 243.56 0 1200.00
## supp_chloride_mg_dsid 5.71 0.00 0 72.00
## supp_chromium_mcg_dsid 3.57 0.00 0 45.00
## supp_copper_mg_dsid 0.04 0.00 0 0.50
## supp_fluoride_mg_dsid 0.00 0.00 0 0.00
## supp_iodine_mcg_dsid 11.90 0.00 0 150.00
## supp_iron_mg_dsid 0.00 0.00 0 200.00
## supp_magnesium_mg_dsid 20.08 0.00 0 400.00
## supp_manganese_mg_dsid 0.18 0.00 0 2.30
## supp_molybdenum_mcg_dsid 3.57 0.00 0 45.00
## supp_nickel_mcg_dsid 0.40 0.00 0 5.00
## supp_phosphorus_mg_dsid 1.59 0.00 0 20.00
## supp_potassium_mg_dsid 7.30 0.00 0 110.00
## supp_selenium_mcg_dsid 4.37 0.00 0 55.00
## supp_silicon_mg_dsid 0.16 0.00 0 2.00
## supp_sodium_mg_dsid 0.00 0.00 0 1.43
## supp_tin_mcg_dsid 0.00 0.00 0 0.00
## supp_vanadium_mcg_dsid 0.79 0.00 0 10.00
## supp_zinc_mg_dsid 2.10 0.00 0 50.00
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.04 0.00 0 0.18
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.03 0.00 0 0.12
## supp_omega_3_fatty_acids_g_dsid 0.00 0.00 0 0.00
## supp_inositol_g_dsid 0.00 0.00 0 0.00
## supp_choline_mg_dsid 0.00 0.00 0 0.00
## range skew kurtosis se
## supp_energy_kcal_dsid 20.00 1.35 0.81 1.67
## supp_protein_g_dsid 1.00 2.79 6.35 0.08
## supp_total_fat_g_dsid 1.00 0.73 -1.43 0.12
## supp_total_polyunsaturated_fatty_acids_g_dsid 0.00 NaN NaN 0.00
## supp_cholesterol_mg_dsid 500.00 1.21 -0.45 55.81
## supp_carbohydrate_g_dsid 3.00 2.79 6.36 0.23
## supp_total_sugars_g_dsid 0.57 2.04 2.90 0.05
## supp_dietary_fiber_g_dsid 3.00 2.79 6.36 0.23
## supp_soluble_dietary_fiber_g_dsid 2.00 2.80 6.37 0.15
## supp_total_vitamin_a_activity_iu_dsid 2500.00 1.21 -0.45 279.04
## supp_vitamin_a_rae_mcg_dsid 750.00 1.21 -0.45 83.71
## supp_beta_carotene_percent_dsid 40.00 1.21 -0.45 4.46
## supp_lutein_zeaxanthin_mcg_dsid 250.00 1.21 -0.45 27.90
## supp_lycopene_mcg_dsid 300.00 1.21 -0.45 33.49
## supp_biotin_mcg_dsid 30.00 1.21 -0.45 3.35
## supp_vitamin_e_as_alpha_tocopherol_mg_dsid 301.50 2.73 6.13 23.02
## supp_vitamin_e_iu_dsid 450.00 2.73 6.13 34.36
## supp_vitamin_k_mcg_dsid 30.00 1.21 -0.45 3.35
## supp_vitamin_c_mg_dsid 1000.00 1.56 0.66 102.20
## supp_thiamin_vitamin_b1_mg_dsid 1.50 1.21 -0.45 0.17
## supp_riboflavin_vitamin_b2_mg_dsid 1.70 1.22 -0.45 0.19
## supp_niacin_mg_dsid 20.00 1.21 -0.45 2.23
## supp_vitamin_b6_mg_dsid 3.00 1.21 -0.45 0.33
## supp_folate_dfe_mcg_dsid 680.00 1.21 -0.45 75.90
## supp_folic_acid_mcg_dsid 400.00 1.21 -0.45 44.65
## supp_vitamin_b12_mcg_dsid 1000.00 2.81 6.42 76.54
## supp_pantothenic_acid_mg_dsid 10.00 1.21 -0.45 1.12
## supp_vitamin_d_d2_d3_mcg_dsid 62.50 1.00 -0.48 5.83
## supp_boron_mcg_dsid 150.00 1.21 -0.45 16.74
## supp_calcium_mg_dsid 1200.00 1.32 0.72 98.31
## supp_chloride_mg_dsid 72.00 1.21 -0.45 8.04
## supp_chromium_mcg_dsid 45.00 1.21 -0.45 5.02
## supp_copper_mg_dsid 0.50 1.21 -0.47 0.06
## supp_fluoride_mg_dsid 0.00 NaN NaN 0.00
## supp_iodine_mcg_dsid 150.00 1.21 -0.45 16.74
## supp_iron_mg_dsid 200.00 2.82 6.44 15.38
## supp_magnesium_mg_dsid 400.00 1.63 1.10 36.09
## supp_manganese_mg_dsid 2.30 1.21 -0.45 0.26
## supp_molybdenum_mcg_dsid 45.00 1.21 -0.45 5.02
## supp_nickel_mcg_dsid 5.00 1.21 -0.45 0.56
## supp_phosphorus_mg_dsid 20.00 1.21 -0.45 2.23
## supp_potassium_mg_dsid 110.00 1.38 0.26 10.38
## supp_selenium_mcg_dsid 55.00 1.21 -0.45 6.14
## supp_silicon_mg_dsid 2.00 1.21 -0.46 0.22
## supp_sodium_mg_dsid 1.43 2.75 6.18 0.11
## supp_tin_mcg_dsid 0.00 NaN NaN 0.00
## supp_vanadium_mcg_dsid 10.00 1.21 -0.45 1.12
## supp_zinc_mg_dsid 50.00 2.37 4.69 3.85
## supp_pfa_20_5_eicosapentaenoic_acid_g_dsid 0.18 0.73 -1.44 0.02
## supp_pfa_22_6_docosahexaenoic_acid_g_dsid 0.12 0.73 -1.46 0.01
## supp_omega_3_fatty_acids_g_dsid 0.00 NaN NaN 0.00
## supp_inositol_g_dsid 0.00 NaN NaN 0.00
## supp_choline_mg_dsid 0.00 NaN NaN 0.00Vitamin subset
Select only Vitamin variables.
vitamin <- food %>% select(starts_with("vitamin_"))
# Histograms
plot_histogram(vitamin)
# Correlations ordinal (tetrachoric or polychoric)
vitamin.cor <- qgraph::cor_auto(vitamin)
plot_correlation(vitamin.cor)
# Correlations linear (Pearson)
plot_correlation(vitamin)
# Network analysis
fit.vitamin <- EGAnet::EGA(vitamin)
fit.vitamin## EGA Results:
##
## Number of Dimensions:
## [1] 3
##
## Items per Dimension:
## items dimension
## v_1 vitamin_b12_mcg 1
## v__2 vitamin_d_d2_d3_mcg 1
## vtmn_d_cl_ vitamin_d_calciferol_mcg 1
## vtmn_d_r_ vitamin_d_ergocalciferol_mcg 1
## vtmn_d_ch_ vitamin_d_cholecalciferol_mcg 1
## vtmn__r__ vitamin_a_retinol_activity_mcg 2
## vtmn_k_ vitamin_k_mcg 2
## vtmn_c_ vitamin_c_mg 2
## v_6 vitamin_b6_mg 2
## v_____ vitamin_e_as_alpha_tocopherol_mg 3
## vtmn__l__ vitamin_e_alpha_tocopherol_mg 3
## vtmn__n__ vitamin_e_international_units_iu 3# Descriptive analysis
des.vitamin <- psych::describe(vitamin, tr =.2)
print(des.vitamin, digits=2)## vars n mean sd median trimmed mad
## vitamin_a_retinol_activity_mcg 1 32 868.70 471.63 790.85 798.63 440.14
## vitamin_e_as_alpha_tocopherol_mg 2 32 8.41 4.12 8.08 8.10 3.71
## vitamin_e_alpha_tocopherol_mg 3 32 8.50 4.05 7.94 8.18 3.62
## vitamin_e_international_units_iu 4 32 13.06 6.60 11.88 12.37 5.21
## vitamin_k_mcg 5 32 208.44 199.14 136.18 155.63 105.03
## vitamin_c_mg 6 32 105.39 58.81 101.19 99.10 63.28
## vitamin_b6_mg 7 32 1.89 0.88 1.64 1.75 0.71
## vitamin_b12_mcg 8 32 4.42 2.63 3.92 4.03 2.21
## vitamin_d_d2_d3_mcg 9 32 5.27 3.98 4.24 4.30 2.94
## vitamin_d_calciferol_mcg 10 32 5.48 4.13 4.54 4.58 3.30
## vitamin_d_ergocalciferol_mcg 11 32 0.02 0.06 0.00 0.00 0.00
## vitamin_d_cholecalciferol_mcg 12 32 5.46 4.14 4.54 4.55 3.31
## min max range skew kurtosis se
## vitamin_a_retinol_activity_mcg 192.62 2081.31 1888.69 0.76 -0.09 83.37
## vitamin_e_as_alpha_tocopherol_mg 1.75 17.89 16.14 0.40 -0.67 0.73
## vitamin_e_alpha_tocopherol_mg 1.78 19.03 17.25 0.58 -0.20 0.72
## vitamin_e_international_units_iu 2.72 32.49 29.77 0.80 0.42 1.17
## vitamin_k_mcg 16.87 940.30 923.43 1.82 3.50 35.20
## vitamin_c_mg 23.80 274.90 251.10 0.73 0.18 10.40
## vitamin_b6_mg 0.67 4.37 3.70 1.22 1.40 0.15
## vitamin_b12_mcg 0.53 12.06 11.53 0.98 0.62 0.46
## vitamin_d_d2_d3_mcg 0.48 15.76 15.28 1.12 0.26 0.70
## vitamin_d_calciferol_mcg 0.42 16.89 16.47 1.09 0.38 0.73
## vitamin_d_ergocalciferol_mcg 0.00 0.34 0.34 4.20 18.09 0.01
## vitamin_d_cholecalciferol_mcg 0.42 16.88 16.46 1.09 0.36 0.73# Descriptive analysis (by Group)
des.vitaminBy <- psych::describeBy(vitamin, food$muscle_loss, tr =.2)
print(des.vitaminBy, digits=2)##
## Descriptive statistics by group
## group: maybe
## vars n mean sd median trimmed mad
## vitamin_a_retinol_activity_mcg 1 7 784.54 421.03 798.31 762.25 436.42
## vitamin_e_as_alpha_tocopherol_mg 2 7 7.11 3.61 7.23 6.71 2.19
## vitamin_e_alpha_tocopherol_mg 3 7 7.04 3.07 7.36 6.72 2.11
## vitamin_e_international_units_iu 4 7 10.62 4.71 10.96 10.10 3.11
## vitamin_k_mcg 5 7 186.95 171.83 132.54 150.92 93.66
## vitamin_c_mg 6 7 86.20 53.87 103.09 85.70 71.16
## vitamin_b6_mg 7 7 1.67 0.70 1.57 1.62 0.74
## vitamin_b12_mcg 8 7 4.36 1.76 4.26 4.59 1.73
## vitamin_d_d2_d3_mcg 9 7 5.67 3.39 5.52 5.27 0.79
## vitamin_d_calciferol_mcg 10 7 6.09 3.71 5.88 5.65 1.14
## vitamin_d_ergocalciferol_mcg 11 7 0.00 0.00 0.00 0.00 0.00
## vitamin_d_cholecalciferol_mcg 12 7 6.09 3.71 5.88 5.65 1.14
## min max range skew kurtosis se
## vitamin_a_retinol_activity_mcg 205.36 1475.16 1269.80 0.25 -1.36 159.13
## vitamin_e_as_alpha_tocopherol_mg 2.65 13.56 10.91 0.44 -1.09 1.36
## vitamin_e_alpha_tocopherol_mg 3.04 12.59 9.55 0.45 -0.98 1.16
## vitamin_e_international_units_iu 4.52 19.36 14.84 0.53 -0.85 1.78
## vitamin_k_mcg 49.01 505.02 456.01 0.84 -1.10 64.94
## vitamin_c_mg 23.80 151.09 127.29 -0.08 -2.01 20.36
## vitamin_b6_mg 0.87 2.74 1.87 0.25 -1.75 0.26
## vitamin_b12_mcg 1.33 6.21 4.88 -0.42 -1.36 0.66
## vitamin_d_d2_d3_mcg 1.08 12.28 11.20 0.67 -0.45 1.28
## vitamin_d_calciferol_mcg 1.06 13.35 12.29 0.69 -0.41 1.40
## vitamin_d_ergocalciferol_mcg 0.00 0.01 0.01 1.62 0.80 0.00
## vitamin_d_cholecalciferol_mcg 1.06 13.35 12.29 0.69 -0.41 1.40
## ------------------------------------------------------------
## group: no
## vars n mean sd median trimmed mad
## vitamin_a_retinol_activity_mcg 1 12 913.14 536.47 795.31 841.13 430.63
## vitamin_e_as_alpha_tocopherol_mg 2 12 8.51 3.94 7.00 8.13 3.62
## vitamin_e_alpha_tocopherol_mg 3 12 8.55 3.46 7.14 8.19 3.09
## vitamin_e_international_units_iu 4 12 13.09 5.51 10.70 12.42 4.45
## vitamin_k_mcg 5 12 277.77 267.37 174.29 215.92 171.33
## vitamin_c_mg 6 12 128.57 62.43 121.12 121.62 56.96
## vitamin_b6_mg 7 12 1.89 0.63 1.88 1.84 0.64
## vitamin_b12_mcg 8 12 3.88 1.97 3.37 3.67 1.30
## vitamin_d_d2_d3_mcg 9 12 4.28 3.10 3.20 3.69 2.04
## vitamin_d_calciferol_mcg 10 12 4.42 3.07 3.54 3.85 2.17
## vitamin_d_ergocalciferol_mcg 11 12 0.01 0.02 0.00 0.00 0.00
## vitamin_d_cholecalciferol_mcg 12 12 4.42 3.08 3.54 3.84 2.17
## min max range skew kurtosis se
## vitamin_a_retinol_activity_mcg 302.24 2081.31 1779.07 0.74 -0.64 154.86
## vitamin_e_as_alpha_tocopherol_mg 2.99 15.62 12.63 0.39 -1.35 1.14
## vitamin_e_alpha_tocopherol_mg 4.29 14.81 10.52 0.46 -1.42 1.00
## vitamin_e_international_units_iu 6.36 22.11 15.75 0.46 -1.52 1.59
## vitamin_k_mcg 35.86 940.30 904.44 1.22 0.45 77.18
## vitamin_c_mg 49.60 274.90 225.30 0.82 -0.01 18.02
## vitamin_b6_mg 0.97 2.89 1.92 0.19 -1.39 0.18
## vitamin_b12_mcg 0.53 7.32 6.79 0.29 -0.98 0.57
## vitamin_d_d2_d3_mcg 0.48 11.18 10.70 0.88 -0.38 0.90
## vitamin_d_calciferol_mcg 0.42 11.72 11.30 0.99 0.15 0.89
## vitamin_d_ergocalciferol_mcg 0.00 0.08 0.08 2.58 5.22 0.01
## vitamin_d_cholecalciferol_mcg 0.42 11.72 11.30 0.99 0.14 0.89
## ------------------------------------------------------------
## group: yes
## vars n mean sd median trimmed mad
## vitamin_a_retinol_activity_mcg 1 13 873.00 464.82 783.39 817.81 466.78
## vitamin_e_as_alpha_tocopherol_mg 2 13 9.02 4.67 8.89 8.86 2.30
## vitamin_e_alpha_tocopherol_mg 3 13 9.24 4.98 8.83 8.95 5.40
## vitamin_e_international_units_iu 4 13 14.35 8.28 13.20 13.68 9.22
## vitamin_k_mcg 5 13 156.01 118.73 102.83 135.39 57.98
## vitamin_c_mg 6 13 94.33 55.01 82.51 86.07 43.99
## vitamin_b6_mg 7 13 2.00 1.16 1.59 1.75 0.59
## vitamin_b12_mcg 8 13 4.95 3.49 4.17 4.33 3.53
## vitamin_d_d2_d3_mcg 9 13 5.97 4.98 4.02 5.00 3.31
## vitamin_d_calciferol_mcg 10 13 6.13 5.18 3.98 5.20 3.93
## vitamin_d_ergocalciferol_mcg 11 13 0.04 0.09 0.00 0.01 0.00
## vitamin_d_cholecalciferol_mcg 12 13 6.09 5.20 3.64 5.15 4.39
## min max range skew kurtosis se
## vitamin_a_retinol_activity_mcg 192.62 1923.63 1731.01 0.65 -0.35 128.92
## vitamin_e_as_alpha_tocopherol_mg 1.75 17.89 16.14 0.20 -0.88 1.29
## vitamin_e_alpha_tocopherol_mg 1.78 19.03 17.25 0.31 -0.84 1.38
## vitamin_e_international_units_iu 2.72 32.49 29.77 0.54 -0.47 2.30
## vitamin_k_mcg 16.87 443.12 426.25 1.03 0.03 32.93
## vitamin_c_mg 31.75 207.34 175.59 0.74 -0.90 15.26
## vitamin_b6_mg 0.67 4.37 3.70 1.07 -0.15 0.32
## vitamin_b12_mcg 1.42 12.06 10.64 0.72 -0.95 0.97
## vitamin_d_d2_d3_mcg 1.55 15.76 14.21 0.86 -0.94 1.38
## vitamin_d_calciferol_mcg 0.68 16.89 16.21 0.80 -0.84 1.44
## vitamin_d_ergocalciferol_mcg 0.00 0.34 0.34 2.41 4.76 0.03
## vitamin_d_cholecalciferol_mcg 0.68 16.88 16.20 0.80 -0.85 1.44