Secuencia de Nucleotidos del Gen MC1R en Humanos

Análisis del Gen MC1R en Humanos

## [1] "NC_000016.10:89918862-89920972 Homo sapiens chromosome 16, GRCh38.p13 Primary Assembly"

## [1] 2111

##        A   C   G   T M R W S Y K V H D B N - + .
## [1,] 386 665 646 414 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Secuencia de Nucleotidos del Gen MC1R en Chimpancé

Análisis del Gen MC1R en Chimpancé

## [1] "NC_036895.1:75718125-75719078 Pan troglodytes isolate Yerkes chimp pedigree #C0471 (Clint) chromosome 16, Clint_PTRv2, whole genome shotgun sequence"

## [1] 954

##        A   C   G   T M R W S Y K V H D B N - + .
## [1,] 144 346 262 202 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Alinamiento con pares de secuencia

## Overlap PairwiseAlignmentsSingleSubject (1 of 1)
## pattern: [398] ATGGCTGTGCAGGGATCCCAGAGAAGACTTC...GCTCAAGGAGGTGCTGACATGCTCCTGGTGA
## subject:   [1] ATGGCTGTGCAGGGATCCCAGAGAAGACTCC...GCTCAAGGAGGTGCTGACGTGCTCCTGGTGA
## score: 1756.636

## [1] "ATGGCTGTGCAGGGATCCCAGAGAAGACT?CTGGGCTCCCTCAACTCCACCCCCACAGCCATCCCCCAGCTGGGGCTGGCTGCCAACCAGACAGGAGCCCGGTGCCTGGAGGTGTCCATC?CTGACGGGCTCTTCCTCAGCCTGGGGCTGGTGAGCTTGGTGGAGAAC??GCTGGTGGTGGCCACCATCGCCAAGAACCGGAACCTGCACTCACCCATGTACTGCTTCATCTGCTGCCTGGCC?TGTCGGACCTGCTGGTGAG?GGGAGCAACGTGCTGGAGACGGCCGTCATCCTCCTGCTGGAGGCCGGTGCACTGGTGGCCCGGGCTGCGGTGCTGCAGCAG?TGGACAATGTCATTGACGTGATCACCTGCAGCTCCATGCTGTCCAGCCTCTGCTTCCTGGGCGCCATCGCCGTGGACCGCTACATCTCCATCTTCTACGCACTGCGCTACCACAGCATCGTGACCCTGCCGCGGGCGCGGCGAGCC?T?GCGGCCATCTGGGTGGCCAGTGTC?TCTTCAGCACGCTCTTCATCGCCTACT?CGACCAC??GGCCGTCCTGCTGTGCCTCGTGGTCTTCTTCCTGGCT?TGCTGGTGCTCATGGC?GTGCTGTACGTCCACATGCTGGCCCGGGCCTGCCAGCACGCCCAGGGCATCGCCCG?CTCCACAAGAGGCAGCGCCCGGTCCACCAGGGCTTTGGCCTTAAAGGCGCTGTCACCCTCACCATCCTGCTGGGCATTTTCTTCCTCTGCTGGGGCCCCTTCTTCCTGCATCTCACACTCATCGTCCTCTGCCCCGAGCACCCCACGTGCGGCTGCATCTTCAAGAACTTCAACCTCTTTCTCGCCCTCATCATCTGCAATGCCATCATCGACCCCCTCATCTACGCCTTCCACAGCCAGGAGCTCCGCAGGACGCTCAAGGAGGTGCTGAC?TGCTCCTGGTGA"

Cálculo de Match, MisMatch y % de identidad

## [1] 937

## [1] 17

## [1] 98.21803