Import Data -

Neuroimaging Database (IGNITE_QC_Database.xlsx)

538 Baseline Sessions
316 Post-Intervention Sessions
854 Total Sessions

QC3 -Visual Inspections

528 Pre-Intervention Scans
315 Post-Intervention Scans
843 Total Scans

QC04 Pipeline (IGNITE_QC_Database.xlsx)

381 Baseline
381 Post-Intervention
7 Scan_Pilots
695 Total

Master Spreadsheets (IGNITE_QC_Database.xlsx)

520 Baseline
314 Post-Intervention
834 Total

ANOVA Spreadsheets (IGNITE_QC_Database.xlsx)

516 Baseline
314 Post-Intervention
830 Total

RedCap Database (*all, no dates)

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DATA0 - Full Dataset

Data Frame Summary

DATA0_Random.v.Reported

Dimensions: 852 x 13
Duplicates: 7
Variable Stats / Values Freqs (% of Valid) Graph Valid Missing
mri_data_complete.factor [factor] 1. Incomplete 2. Unverified 3. Complete
7(0.8%)
0(0.0%)
845(99.2%)
 852 (100%) 0 (0%)
WeeklyReport [factor] 1. Current 2. Reported 3. Excluded
3(0.4%)
840(98.6%)
9(1.1%)
 852 (100%) 0 (0%)
QC3.complete.factor [factor] 1. Incomplete 2. Complete
9(1.1%)
843(98.9%)
 852 (100%) 0 (0%)
ANAT.MASTERS.Factor [character] 1. Excluded 2. Included
22(2.6%)
830(97.4%)
 852 (100%) 0 (0%)
ANOVA.Factor [factor] 1. Excluded 2. Reported
22(2.6%)
830(97.4%)
 852 (100%) 0 (0%)
randomization_complete.factor [character] 1. Complete 2. Incomplete
810(95.1%)
42(4.9%)
 852 (100%) 0 (0%)
MPRAGE_snr_total [numeric] Mean (sd) : 10.3 (0.7) min < med < max: 1.8 < 10.3 < 12.9 IQR (CV) : 0.8 (0.1) 835 distinct values 838 (98.36%) 14 (1.64%)
Rest_snr [numeric] Mean (sd) : 2.2 (0.3) min < med < max: 1.5 < 2.2 < 3.2 IQR (CV) : 0.4 (0.1) 834 distinct values 837 (98.24%) 15 (1.76%)
RISE_enc_snr [numeric] Mean (sd) : 2.2 (0.3) min < med < max: 1.5 < 2.2 < 3.1 IQR (CV) : 0.4 (0.1) 832 distinct values 834 (97.89%) 18 (2.11%)
Nback_snr [numeric] Mean (sd) : 2 (0.3) min < med < max: 1.3 < 2 < 2.9 IQR (CV) : 0.4 (0.1) 836 distinct values 838 (98.36%) 14 (1.64%)
RISE_rec_snr [numeric] Mean (sd) : 2.2 (0.3) min < med < max: 1.3 < 2.2 < 3.1 IQR (CV) : 0.4 (0.1) 829 distinct values 831 (97.54%) 21 (2.46%)
DTI_meanFA [numeric] Mean (sd) : 0.3 (0) min < med < max: 0.2 < 0.3 < 0.5 IQR (CV) : 0 (0.1) 825 distinct values 829 (97.3%) 23 (2.7%)
FLAIR_snr [numeric] Mean (sd) : 2.5 (0.2) min < med < max: 1.7 < 2.5 < 2.9 IQR (CV) : 0.2 (0.1) 742 distinct values 816 (95.77%) 36 (4.23%)

Generated by summarytools 0.9.6 (R version 3.6.1)
2020-12-06

Incomplete Randomization, but included in MASTER/ANOVA Spreadsheets:

MASTER Spreadsheets 22
20061MR1, 10335MR1, 30206MR1, 30258MR1, 30302MR1, 10505MR1, 30518MR1, 30840MR1, 30874MR1, 11051MR1, 30970MR1, 30978MR1, 30976MR1, 11124MR1, 30997MR1, 20434MR1, 20431MR1, 31056MR1, 11193MR1, 31049MR1, 11192MR1, 31001MR1

ANOVA Spresdsheets 22
20061MR1, 10335MR1, 30206MR1, 30258MR1, 30302MR1, 10505MR1, 30518MR1, 30840MR1, 30874MR1, 11051MR1, 30970MR1, 30978MR1, 30976MR1, 11124MR1, 30997MR1, 20434MR1, 20431MR1, 31056MR1, 11193MR1, 31049MR1, 11192MR1, 31001MR1

Pending/Incomplete Visual Inspection:

Non-Randomized Participants: 10251MR1, 10299MR1, 10185MR1, 10591MR1, 10474MR1, 10765MR1, 10937MR1

Randomized Participants:

Pending Addition..

Missing from MASTERS:: 20394MR2

Missing from ANOVA:: 20394MR2

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Current Report -

University of Pittsburgh

Kansas University

Northeasten University

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DATA1 - Randomization Complete

DATA1 - Exclude Incomplete Randomization: 808

494 Baseline
314 Post-Intervention

Pending/Incomplete Visual Inspection:
Export Dataset Back-Ups -

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Set Data - Randomization Complete

Visualization Factors

ExPanDaR - Shiny App

https://joachim-gassen.github.io/ExPanDaR/articles/use_ExPanD.html#defining-additional-variables

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Visualization Plots

T1 MPRAGE

BOLD N-Back

BOLD Resting State

BOLD Rise Encoding

BOLD Rise Recognition

DTI

T2 Flair & pCASL

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Analyses

MRIQC ~ MRI Read Level

MRIQC ~ pCASL Clipping

UPitt -

MRIQC ~ MRI Safety

Kansas -

MRIQC ~ Chiller/Coil Issues

DTI.FieldMap.Pulse.Clipped

Northeastern -

MRIQC ~ Construction