Mòduls significatius
Es selecciones els mòduls correlacionats amb la variable motherGen de manera significativa
| mòdul | correlació | longitud |
|---|---|---|
| green.txt | 0.539 | 608 |
| magenta.txt | 0.550 | 203 |
| tan.txt | 0.478 | 65 |
| salmon.txt | 0.447 | 64 |
| darkred.txt | 0.441 | 25 |
| grey60.txt | 0.457 | 50 |
| cyan.txt | 0.562 | 48 |
| brown.txt | 0.994 | 6139 |
| turquoise.txt | 0.835 | 14785 |
| midnightblue.txt | 0.348 | 35 |
| greenyellow.txt | 0.344 | 104 |
Separació Possitius i negatius
Es separen els mòduls en correlacionats de manera postiv ai negativa
Postius
Es selecciona un cutof per al p valor de 0.05. El p valor està ajustat per fdr
KEGG
Dotplot
Visualitza la puntuació de l’enrequiment amb el p-valor i el reconte de gens
Xarxa de gens
Xarxa conectant els gens entre diferents procesos biologics (GO o KEGG)
| Description | Description_1 |
|---|---|
| mmu04120 | Ubiquitin mediated proteolysis |
| mmu05012 | Parkinson disease |
| mmu05016 | Huntington disease |
| mmu03040 | Spliceosome |
| mmu03013 | RNA transport |
| mmu05216 | Thyroid cancer |
| mmu04260 | Cardiac muscle contraction |
| mmu05410 | Hypertrophic cardiomyopathy (HCM) |
| mmu05414 | Dilated cardiomyopathy (DCM) |
| mmu04261 | Adrenergic signaling in cardiomyocytes |
| mmu03013 | RNA transport |
| mmu04710 | Circadian rhythm |
| mmu04713 | Circadian entrainment |
| mmu04120 | Ubiquitin mediated proteolysis |
| mmu04141 | Protein processing in endoplasmic reticulum |
| mmu04061 | Viral protein interaction with cytokine and cytokine receptor |
| mmu04064 | NF-kappa B signaling pathway |
| mmu04062 | Chemokine signaling pathway |
| mmu04060 | Cytokine-cytokine receptor interaction |
| mmu04910 | Insulin signaling pathway |
| mmu04080 | Neuroactive ligand-receptor interaction |
| mmu04726 | Serotonergic synapse |
| mmu05033 | Nicotine addiction |
| mmu04971 | Gastric acid secretion |
| mmu04024 | cAMP signaling pathway |
| Description | Description_1 |
|---|---|
| R-MMU-196071 | Metabolism of steroid hormones |
| R-MMU-72695 | Formation of the ternary complex, and subsequently, the 43S complex |
| R-MMU-72649 | Translation initiation complex formation |
| R-MMU-72702 | Ribosomal scanning and start codon recognition |
| R-MMU-72662 | Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S |
| R-MMU-72766 | Translation |
| R-MMU-72689 | Formation of a pool of free 40S subunits |
| R-MMU-8866652 | Synthesis of active ubiquitin: roles of E1 and E2 enzymes |
| R-MMU-156827 | L13a-mediated translational silencing of Ceruloplasmin expression |
| R-MMU-983168 | Antigen processing: Ubiquitination & Proteasome degradation |
| R-MMU-72706 | GTP hydrolysis and joining of the 60S ribosomal subunit |
| R-MMU-8951664 | Neddylation |
| R-MMU-72613 | Eukaryotic Translation Initiation |
| R-MMU-72737 | Cap-dependent Translation Initiation |
| R-MMU-8852135 | Protein ubiquitination |
| R-MMU-983169 | Class I MHC mediated antigen processing & presentation |
| R-MMU-8873719 | RAB geranylgeranylation |
| R-MMU-429947 | Deadenylation of mRNA |
| R-MMU-1169408 | ISG15 antiviral mechanism |
| R-MMU-445355 | Smooth Muscle Contraction |
| R-MMU-1169410 | Antiviral mechanism by IFN-stimulated genes |
| R-MMU-390522 | Striated Muscle Contraction |
| R-MMU-429914 | Deadenylation-dependent mRNA decay |
| R-MMU-72649 | Translation initiation complex formation |
| R-MMU-72702 | Ribosomal scanning and start codon recognition |
| R-MMU-72662 | Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S |
| R-MMU-913531 | Interferon Signaling |
| R-MMU-156827 | L13a-mediated translational silencing of Ceruloplasmin expression |
| R-MMU-72706 | GTP hydrolysis and joining of the 60S ribosomal subunit |
| R-MMU-72613 | Eukaryotic Translation Initiation |
| R-MMU-72737 | Cap-dependent Translation Initiation |
| R-MMU-397014 | Muscle contraction |
| R-MMU-1237044 | Erythrocytes take up carbon dioxide and release oxygen |
| R-MMU-1480926 | O2/CO2 exchange in erythrocytes |
| R-MMU-3299685 | Detoxification of Reactive Oxygen Species |
| R-MMU-2980736 | Peptide hormone metabolism |
| R-MMU-380108 | Chemokine receptors bind chemokines |
| R-MMU-375276 | Peptide ligand-binding receptors |
| R-MMU-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-MMU-418594 | G alpha (i) signalling events |
| R-MMU-500792 | GPCR ligand binding |
| R-MMU-112316 | Neuronal System |
Heatmap
Simplifica la xarxa de gens/processos biològics.
## Warning: Removed 1596 rows containing missing values (geom_tile).
Mapa de funcions
Mostra les funcions organitzades en una xarxa conectades pels gens comuns,
UpSet Plot
Visualització de la associació entre gens i conjunts de gens i resalta el solapaments que hi ha.
Vias KEGG
Visualització de les vies KEGG resaltant els gens que hi participen
GO
Dotplot
Visualitza la puntuació de l’enrequiment amb el p-valor i el reconte de gens
Xarxa de gens
Xarxa conectant els gens entre diferents procesos biologics (GO o KEGG)
Heatmap
Simplifica la xarxa de gens/processos biològics.
## Warning: Removed 3842 rows containing missing values (geom_tile).
Mapa de funcions
Mostra les funcions organitzades en una xarxa conectades pels gens comuns,
UpSet Plot
Visualització de la associació entre gens i conjunts de gens i resalta el solapaments que hi ha.
Molecular function
| Description | Description_1 | |
|---|---|---|
| GO:0001228 | GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO:0001227 | GO:0001227 | DNA-binding transcription repressor activity, RNA polymerase II-specific |
| GO:0004879 | GO:0004879 | nuclear receptor activity |
| GO:0030374 | GO:0030374 | nuclear receptor transcription coactivator activity |
| GO:0004129 | GO:0004129 | cytochrome-c oxidase activity |
| GO:0004174 | GO:0004174 | electron-transferring-flavoprotein dehydrogenase activity |
| GO:0008121 | GO:0008121 | ubiquinol-cytochrome-c reductase activity |
| GO:0045155 | GO:0045155 | electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity |
| GO:0008391 | GO:0008391 | arachidonic acid monooxygenase activity |
| GO:0008395 | GO:0008395 | steroid hydroxylase activity |
| GO:0008401 | GO:0008401 | retinoic acid 4-hydroxylase activity |
| GO:0008403 | GO:0008403 | 25-hydroxycholecalciferol-24-hydroxylase activity |
| GO:0016709 | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen |
| GO:0016712 | GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen |
| GO:0016713 | GO:0016713 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen |
| GO:0016714 | GO:0016714 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen |
| GO:0016715 | GO:0016715 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen |
| GO:0016716 | GO:0016716 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen |
| GO:0019135 | GO:0019135 | deoxyhypusine monooxygenase activity |
| GO:0071614 | GO:0071614 | linoleic acid epoxygenase activity |
| GO:0003954 | GO:0003954 | NADH dehydrogenase activity |
| Description | Description_1 | |
|---|---|---|
| GO:0044020 | GO:0044020 | histone methyltransferase activity (H4-R3 specific) |
| GO:0031151 | GO:0031151 | histone methyltransferase activity (H3-K79 specific) |
| GO:0042800 | GO:0042800 | histone methyltransferase activity (H3-K4 specific) |
| GO:0046974 | GO:0046974 | histone methyltransferase activity (H3-K9 specific) |
| GO:0046975 | GO:0046975 | histone methyltransferase activity (H3-K36 specific) |
| GO:0046976 | GO:0046976 | histone methyltransferase activity (H3-K27 specific) |
| GO:0004671 | GO:0004671 | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity |
| GO:0030697 | GO:0030697 | S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity |
| GO:0052905 | GO:0052905 | tRNA (guanine(9)-N(1))-methyltransferase activity |
| GO:0052909 | GO:0052909 | 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity |
| GO:1990189 | GO:1990189 | peptide-serine-N-acetyltransferase activity |
| GO:1990190 | GO:1990190 | peptide-glutamate-N-acetyltransferase activity |
| GO:0004402 | GO:0004402 | histone acetyltransferase activity |
| GO:0019799 | GO:0019799 | tubulin N-acetyltransferase activity |
| GO:0005025 | GO:0005025 | transforming growth factor beta receptor activity, type I |
| GO:0070123 | GO:0070123 | transforming growth factor beta receptor activity, type III |
| GO:0016361 | GO:0016361 | activin receptor activity, type I |
| GO:0004705 | GO:0004705 | JUN kinase activity |
| GO:0005004 | GO:0005004 | GPI-linked ephrin receptor activity |
| GO:0005005 | GO:0005005 | transmembrane-ephrin receptor activity |
| Description | Description_1 | |
|---|---|---|
| GO:0044020 | GO:0044020 | histone methyltransferase activity (H4-R3 specific) |
| GO:0031151 | GO:0031151 | histone methyltransferase activity (H3-K79 specific) |
| GO:0042800 | GO:0042800 | histone methyltransferase activity (H3-K4 specific) |
| GO:0046974 | GO:0046974 | histone methyltransferase activity (H3-K9 specific) |
| GO:0046975 | GO:0046975 | histone methyltransferase activity (H3-K36 specific) |
| GO:0046976 | GO:0046976 | histone methyltransferase activity (H3-K27 specific) |
| GO:0004671 | GO:0004671 | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity |
| GO:0030697 | GO:0030697 | S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity |
| GO:0052905 | GO:0052905 | tRNA (guanine(9)-N(1))-methyltransferase activity |
| GO:0052909 | GO:0052909 | 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity |
| GO:1990189 | GO:1990189 | peptide-serine-N-acetyltransferase activity |
| GO:1990190 | GO:1990190 | peptide-glutamate-N-acetyltransferase activity |
| GO:0004402 | GO:0004402 | histone acetyltransferase activity |
| GO:0019799 | GO:0019799 | tubulin N-acetyltransferase activity |
| GO:0005025 | GO:0005025 | transforming growth factor beta receptor activity, type I |
| GO:0070123 | GO:0070123 | transforming growth factor beta receptor activity, type III |
| GO:0016361 | GO:0016361 | activin receptor activity, type I |
| GO:0004705 | GO:0004705 | JUN kinase activity |
| GO:0005004 | GO:0005004 | GPI-linked ephrin receptor activity |
| GO:0005005 | GO:0005005 | transmembrane-ephrin receptor activity |
| Description | Description_1 | |
|---|---|---|
| GO:1905056 | GO:1905056 | calcium-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration |
| GO:1905059 | GO:1905059 | calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration |
| GO:0005391 | GO:0005391 | sodium:potassium-exchanging ATPase activity |
| GO:0008900 | GO:0008900 | potassium:proton exchanging ATPase activity |
| GO:0046961 | GO:0046961 | proton-transporting ATPase activity, rotational mechanism |
| GO:0008553 | GO:0008553 | proton-exporting ATPase activity, phosphorylative mechanism |
Biological proces
| Term_1 | name |
|---|---|
| reproduction | GO:0000003 |
| developmental process involved in reproduction | GO:0003006 |
| multicellular organism development | GO:0007275 |
| biological_process | GO:0008150 |
| metabolic process | GO:0008152 |
| reproductive process | GO:0022414 |
| multicellular organismal process | GO:0032501 |
| developmental process | GO:0032502 |
| single-multicellular organism process | GO:0044707 |
| single-organism developmental process | GO:0044767 |
| reproductive structure development | GO:0048608 |
| system development | GO:0048731 |
| anatomical structure development | GO:0048856 |
| reproductive system development | GO:0061458 |
| organic substance metabolic process | GO:0071704 |
| organic hydroxy compound metabolic process | GO:1901615 |
| Description | Description_1 | |
|---|---|---|
| GO:0007281 | GO:0007281 | germ cell development |
| GO:0007292 | GO:0007292 | female gamete generation |
| GO:0008354 | GO:0008354 | germ cell migration |
| GO:0036093 | GO:0036093 | germ cell proliferation |
| GO:0043046 | GO:0043046 | DNA methylation involved in gamete generation |
| GO:0048232 | GO:0048232 | male gamete generation |
| GO:0007617 | GO:0007617 | mating behavior |
| GO:0007620 | GO:0007620 | copulation |
| GO:0007338 | GO:0007338 | single fertilization |
| GO:0060467 | GO:0060467 | negative regulation of fertilization |
| GO:0080154 | GO:0080154 | regulation of fertilization |
| GO:1905516 | GO:1905516 | positive regulation of fertilization |
| GO:0001547 | GO:0001547 | antral ovarian follicle growth |
| GO:0001552 | GO:0001552 | ovarian follicle atresia |
| GO:0001555 | GO:0001555 | oocyte growth |
| GO:0001556 | GO:0001556 | oocyte maturation |
| GO:0001675 | GO:0001675 | acrosome assembly |
| GO:0001880 | GO:0001880 | Mullerian duct regression |
| GO:0001892 | GO:0001892 | embryonic placenta development |
| GO:0001893 | GO:0001893 | maternal placenta development |
| Description | Description_1 | |
|---|---|---|
| GO:1900193 | GO:1900193 | regulation of oocyte maturation |
| GO:1900194 | GO:1900194 | negative regulation of oocyte maturation |
| GO:1900195 | GO:1900195 | positive regulation of oocyte maturation |
| GO:1903537 | GO:1903537 | meiotic cell cycle process involved in oocyte maturation |
| GO:0007309 | GO:0007309 | oocyte axis specification |
| GO:0060282 | GO:0060282 | positive regulation of oocyte development |
| GO:0060283 | GO:0060283 | negative regulation of oocyte development |
| GO:1903538 | GO:1903538 | regulation of meiotic cell cycle process involved in oocyte maturation |
| GO:0007315 | GO:0007315 | pole plasm assembly |
| GO:0007290 | GO:0007290 | spermatid nucleus elongation |
| GO:0035092 | GO:0035092 | sperm chromatin condensation |
| GO:0060474 | GO:0060474 | positive regulation of flagellated sperm motility involved in capacitation |
| GO:1902490 | GO:1902490 | regulation of sperm capacitation |
| GO:1902491 | GO:1902491 | negative regulation of sperm capacitation |
| GO:0060009 | GO:0060009 | Sertoli cell development |
| GO:1904444 | GO:1904444 | regulation of establishment of Sertoli cell barrier |
| GO:2000019 | GO:2000019 | negative regulation of male gonad development |
| GO:2000020 | GO:2000020 | positive regulation of male gonad development |
| GO:1904445 | GO:1904445 | negative regulation of establishment of Sertoli cell barrier |
| GO:1904446 | GO:1904446 | positive regulation of establishment of Sertoli cell barrier |
| Description | Description_1 | |
|---|---|---|
| GO:0030719 | GO:0030719 | P granule organization |
| GO:0061188 | GO:0061188 | negative regulation of chromatin silencing at rDNA |
| GO:0090309 | GO:0090309 | positive regulation of methylation-dependent chromatin silencing |
| GO:0090310 | GO:0090310 | negative regulation of methylation-dependent chromatin silencing |
| GO:0031940 | GO:0031940 | positive regulation of chromatin silencing at telomere |
| GO:0035582 | GO:0035582 | sequestering of BMP in extracellular matrix |
| GO:0038098 | GO:0038098 | sequestering of BMP from receptor via BMP binding |
| GO:2001165 | GO:2001165 | positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues |
| GO:1900175 | GO:1900175 | regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry |
| GO:1900176 | GO:1900176 | negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry |
| GO:1900146 | GO:1900146 | negative regulation of nodal signaling pathway involved in determination of left/right asymmetry |
| GO:0072363 | GO:0072363 | regulation of glycolytic process by positive regulation of transcription from RNA polymerase II promoter |
| GO:0061621 | GO:0061621 | canonical glycolysis |
| GO:0061622 | GO:0061622 | glycolytic process through glucose-1-phosphate |
| GO:0061623 | GO:0061623 | glycolytic process from galactose |
| GO:0093001 | GO:0093001 | glycolysis from storage polysaccharide through glucose-1-phosphate |
| GO:1902958 | GO:1902958 | positive regulation of mitochondrial electron transport, NADH to ubiquinone |
| GO:0045820 | GO:0045820 | negative regulation of glycolytic process |
| GO:0045821 | GO:0045821 | positive regulation of glycolytic process |
| GO:0072361 | GO:0072361 | regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter |
msigdbr
H: hallmark gene sets
C1: positional gene sets
C2: curated gene sets
C3: motif gene sets
C4: computational gene sets
C5: GO gene sets
C6: oncogenic signatures
C7: immunologic signatures
Categoria H
Categoria C1
Categoria C2
##
##
## ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
## -------------------------------------------- -------------------------------------------- -------------------------------------------- ---------- ---------- --------- ---------- ---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------
## MEISSNER_BRAIN_HCP_WITH_H3K27ME3 MEISSNER_BRAIN_HCP_WITH_H3K27ME3 MEISSNER_BRAIN_HCP_WITH_H3K27ME3 184/9027 268/17218 0.00e+00 0.0001808 0.0001808 11568/56847/216285/11694/93835/75305/11830/53313/14422/54422/104382/12022/140489/12173/12311/80794/109332/12590/12614/12647/110834/12739/224912/13081/13082/320997/13172/13363/107585/13386/140477/74129/50796/242523/70433/13599/17075/13984/69627/107221/14175/14179/14186/64290/14240/17301/15221/110805/30923/14241/116810/14419/14463/14472/14581/14587/14683/14711/14765/170483/14836/14843/234219/15206/15364/15371/15373/21410/15395/15396/15398/15401/15413/15414/15415/15417/109663/15421/15422/15424/15429/15430/15431/15432/15433/16002/140488/75426/22780/16162/23920/54139/16372/50916/333088/69073/16668/16814/16815/329252/16869/16871/16873/16875/17357/215723/27217/17390/17927/217214/230822/18014/11925/21869/18091/12020/18096/18131/18142/109648/78405/94222/246086/21906/18420/18426/18503/100102/18609/11859/18740/18741/18772/66857/213522/18997/232941/230025/383491/107751/19213/217212/19434/76572/56315/228770/99377/224024/20277/20464/20465/20472/20476/214084/20508/230810/67473/20538/66722/50525/20732/57765/277353/58865/210510/21420/332937/21908/27140/380863/66260/21928/81877/22062/63873/22286/12677/269633/22410/22414/22415/22416/22422/20834 184
## GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN 209/9027 315/17218 3.00e-07 0.0007109 0.0007109 27403/27406/56215/11603/109674/68423/69596/213498/16800/76813/108888/73242/13498/233871/22385/223770/12323/50817/219158/104445/57912/11444/71722/53609/74157/216846/26895/269061/27373/12388/66515/78309/231871/70248/98193/227525/229541/277854/216877/13401/208266/66811/112403/110147/27979/13854/14050/68952/14087/231863/233902/230903/243867/55935/54601/18550/23879/234366/230101/106039/223752/243547/54645/14885/76478/15161/170787/56233/29816/11991/26386/15983/234836/16068/16201/68510/69707/16529/233877/230674/16549/118445/381022/214669/224640/232798/16886/16897/627607/16995/26396/19094/30957/13728/17192/244049/100019/17261/27008/28010/50932/64658/229524/56717/59310/17925/380969/216860/18038/70930/72181/328250/18515/192285/68479/68961/75454/18693/18720/14208/232807/71474/226169/53761/56361/60507/81000/71810/19387/380711/19647/381626/66932/433809/235315/19899/20166/12399/224902/216161/240667/57743/20359/233904/72895/84505/231769/20389/105835/20401/24055/79566/83704/54338/106947/83797/229512/71997/227644/56632/100689/73218/75956/83701/20869/234373/77053/72195/68188/230676/70439/381085/21423/77832/21678/70381/331401/230917/216157/51789/212999/320938/67976/22030/72026/100683/52588/234875/74569/68736/22185/70450/103149/382038/30941/22321/72322/230119/20286/80902/54201/140482/66056/68992/213753/18139/233905/103836/52915 209
## MIKKELSEN_NPC_HCP_WITH_H3K27ME3 MIKKELSEN_NPC_HCP_WITH_H3K27ME3 MIKKELSEN_NPC_HCP_WITH_H3K27ME3 220/9027 342/17218 4.70e-06 0.0072839 0.0072839 11307/107831/11553/224833/11682/216285/11694/383787/192113/11941/227327/14422/14025/140489/12161/12173/23829/226359/67445/94332/12311/72605/228942/12426/12564/12614/12647/64085/83674/21367/12819/140792/12889/240058/242939/224912/72832/12958/57266/13082/216393/13172/70059/140477/50796/226049/76088/269109/13489/114873/13599/66892/13842/14029/109349/219148/69627/237730/54713/107221/14169/14175/14255/14240/15221/30923/15228/14241/116810/110886/14407/271786/14581/14619/14617/14807/14810/14812/108073/14842/14843/15162/15166/230777/94253/15206/15396/15398/15413/15415/15417/209448/15422/15427/15430/15431/170638/99296/15550/15566/16002/75426/22778/22780/243621/16392/57340/16510/16527/16535/16539/243043/16763/16814/213409/16873/16875/83557/16891/79235/238205/227618/27217/380684/18013/11925/21869/18089/18096/101613/18142/18143/18232/246086/21906/18420/18426/18503/18505/18591/18609/18667/327958/18740/216166/72324/18997/232941/269643/70673/18762/50501/246313/19132/19213/19275/19281/217212/75767/268451/58222/380711/74563/52897/72388/104582/65079/94226/99377/399548/20271/20278/170729/380702/24058/20464/20465/20476/78473/207667/140919/20519/22784/69354/229706/13162/104245/241919/226999/30927/66673/78088/20672/20732/20743/56013/20451/20257/29859/20980/57765/21407/21420/226896/21908/27140/270893/231503/72160/21934/22062/22068/22286/270097/22337/22354/114889/240675/22408/22416 220
## MIKKELSEN_MCV6_HCP_WITH_H3K27ME3 MIKKELSEN_MCV6_HCP_WITH_H3K27ME3 MIKKELSEN_MCV6_HCP_WITH_H3K27ME3 270/9027 435/17218 2.53e-05 0.0295863 0.0295863 75434/20927/319713/11423/11482/107831/11540/11553/11568/106877/16764/72168/11634/56847/11686/11687/11733/383787/11830/11878/17173/11419/11418/11941/320707/93961/12022/320522/140489/12124/12161/12217/23829/226359/67445/12289/12291/239556/12294/54377/12323/12424/12426/104010/108013/12647/269610/69121/110834/11444/64085/83674/21367/12819/240058/57266/13081/13116/56320/72185/13363/107585/54427/13447/208869/623279/269109/70433/13508/26903/228598/13599/58229/13637/13823/13842/270190/14029/270028/329274/213956/69640/330450/237730/330369/54713/14167/14176/14179/384061/14240/15221/110805/30923/242425/14397/110886/14403/14419/14463/14573/14587/14623/104174/14800/14803/170935/170483/74053/14816/14843/230777/15208/214305/15371/209448/15421/15427/15431/15432/195646/15552/15565/15566/23920/15900/50916/16398/57340/16490/16504/99738/56543/16510/16511/192775/16520/16535/60613/16539/227632/69073/16591/16728/76161/16814/213469/269629/16871/16873/381983/211187/17005/69032/17183/27217/17395/105689/16918/244281/17927/380684/54003/18014/11925/18018/18072/18089/18091/18095/18096/27386/170484/53324/18183/18190/18217/18232/102644/246086/69602/18430/23969/406218/74090/18574/18584/18609/319655/230025/381813/107751/74002/19213/19259/19263/19281/217212/229214/268451/51801/74563/276952/19434/52897/19662/19699/241770/104582/228770/65079/399548/20271/20273/20277/170729/56788/237979/20361/56747/237353/214547/20465/20472/78473/207667/214084/20508/22348/76157/210027/232333/229706/20538/104245/105243/20562/233744/20743/20605/20609/57740/20262/627191/54526/238266/20980/54524/57765/21645/210510/332937/270893/210573/320500/66260/60455/69539/22062/320736/114889/12677/269633/22410/22414/22416/22422/320916/53422/22771 270
Categoria C3
Categoria C4
##
##
## ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
## ----------- ----------- ------------ ---------- --------- ---------- ---------- ---------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------
## MODULE_215 MODULE_215 MODULE_215 15/5071 15/9546 0.0000750 0.0382453 0.0362276 108043/14395/110886/14399/14400/14401/14402/14403/14406/216643/14654/237213/110304/14658/15561 15
## MORF_FOSL1 MORF_FOSL1 MORF_FOSL1 243/5071 389/9546 0.0000912 0.0382453 0.0362276 76967/230757/56325/20927/100705/384806/23793/269959/11516/11549/228061/23802/11810/11830/99371/11941/11945/21871/54670/110616/12023/12043/12125/12154/224630/223770/57261/26363/260299/140904/100503659/12771/12501/12511/12525/226751/12561/12593/26365/13706/382090/60322/270166/53870/12823/12837/269132/382864/12850/56373/208922/242939/12921/13030/69888/13106/64385/277854/234130/13400/56429/13527/230857/13612/111173/13982/14063/14065/14102/14254/14283/320365/72313/14309/14394/14401/14531/14602/14622/100041146/66355/14706/14712/237943/241070/110168/14760/14805/14809/243547/107766/56541/387285/58180/21405/109663/15492/15494/15551/15561/15562/15566/16002/16157/16163/16170/16189/16196/64436/72999/226432/434232/223272/16426/16427/320404/16447/382207/16449/16469/77532/235041/80880/16493/58179/16681/71888/16672/16679/16841/16939/17085/17140/14924/26400/17175/17203/17246/29808/17354/68481/17686/17692/17701/17752/17882/17925/17932/80987/17996/54446/74164/18126/18132/18143/23957/18171/22025/13865/110784/18187/18188/18189/66566/218066/75475/76303/78826/18511/55982/18577/225600/102693/18935/17344/27276/229791/18846/19009/218030/329251/225849/19076/18750/228769/19211/19263/52118/12421/19656/51902/225998/68750/20199/107767/244891/20272/56747/20379/24052/20465/20476/56643/217316/105355/18399/22784/20536/20538/233789/56504/170460/54200/29859/109115/20975/57752/77097/83993/21812/21846/216821/327766/665113/83813/21848/223435/22115/75425/63958/29869/109637/74270/22288/22380/22414/22666/81630/80902/233410/209225/22787/432731 243
## MORF_IFNA1 MORF_IFNA1 MORF_IFNA1 126/5071 191/9546 0.0001886 0.0418842 0.0396745 384806/23793/269959/99633/11810/12915/11941/11945/54670/110616/12154/57261/12293/260299/140904/100072/12771/12564/382253/26365/382090/12727/12823/12837/269132/12850/56373/12921/13030/13106/13164/13171/13400/76829/13612/14048/14063/269514/14161/14173/399558/14283/14309/14401/14531/14622/110304/100041146/14706/241070/110168/14760/14805/14917/245650/14934/387285/15203/21405/15492/15494/16189/16196/226432/16392/223272/16426/382207/77532/16493/58179/16681/16672/16841/15450/17140/26400/26401/17203/17246/17354/17882/17996/319211/18143/18171/110784/218066/18416/78826/225600/102693/18935/229791/218030/18750/19263/19279/52118/52013/12421/245688/26564/225998/68750/20190/20199/24052/20465/20476/56643/20504/23985/20538/69726/29859/109115/83993/21892/327766/83813/21848/22115/22666/80902/432731 126
## MORF_DDX11 MORF_DDX11 MORF_DDX11 102/5071 151/9546 0.0001997 0.0418842 0.0396745 11490/77794/55979/23802/106585/11830/57370/228536/12043/26363/67488/12323/12366/69562/12569/68379/270166/12799/21367/54188/12909/12922/56429/225898/14068/381217/68521/60534/14149/338355/108148/64095/14809/14772/209357/15353/106894/15388/26386/15562/15566/106633/20589/235086/16363/272359/16582/67207/17005/51812/17701/17752/17827/17906/17925/80987/15531/58202/235134/18045/56409/69837/67199/55981/18739/268930/66905/67037/66053/19089/19132/54373/56294/56187/19386/225182/19891/58988/208043/231769/70661/20498/67863/22784/246787/14664/20741/20609/108903/21414/385380/70549/75604/71947/21958/70026/75425/71472/22410/80707/233410/72739 102
Categoria C5
Categoria C6
##
##
## ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
## ------------- ------------- ------------- ---------- ---------- ---------- ---------- ---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------
## ALK_DN.V1_UP ALK_DN.V1_UP ALK_DN.V1_UP 91/5492 130/10150 0.0001426 0.0269592 0.0269592 83766/11489/11704/11601/57875/64008/27053/54218/12167/12182/12349/12350/332579/76718/12411/24047/20297/12454/12611/12638/12642/68947/269582/12964/209294/26378/13406/18606/215446/13819/13874/14009/14079/50788/56636/14221/14261/14635/23886/14563/14816/14829/72690/16136/16178/16193/70789/83557/17001/170790/17523/17532/17768/18038/18111/257632/18211/100503041/18155/12142/107272/76938/67747/20130/20208/20209/20265/20274/75345/171286/20512/20514/14664/26570/67652/20750/20257/21372/21385/56720/21426/69876/58217/228775/244178/382018/22339/320736/22433/67778/20834 91
Categoria C7
WikiPathway
| ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count | |
|---|---|---|---|---|---|---|---|---|---|
| WP79 | WP79 | Tryptophan metabolism | 34/2378 | 44/4644 | 0.0003288 | 0.0542495 | 0.0522595 | 23923/71562/11668/11671/56752/11761/107626/12359/13075/13076/13077/72082/13106/64385/13123/13195/74754/93747/270076/107766/15107/15108/15930/21743/70789/109731/17246/15469/57751/56720/21990/22215/70790/22375 | 34 |
| WP2074 | WP2074 | Neural Crest Differentiation | 68/2378 | 101/4644 | 0.0006694 | 0.0552288 | 0.0532029 | 17172/12005/12162/12563/241201/13190/13388/54485/13395/140477/13544/23871/14170/14173/14179/14182/15221/14365/14472/14580/14618/433759/170787/15183/208727/15185/56233/70315/79221/15208/15214/15394/15901/16392/16869/16870/16873/17196/12587/17342/17702/17703/17863/18014/18033/18128/18129/18131/18132/50914/94222/18505/18935/18858/235472/19664/11852/20613/20665/20678/20682/21389/21413/21418/22160/22408/22416/22771 | 68 |
## wrong orderBy parameter; set to default `orderBy = "x"`
