Base de dades descarregada 56289
| file | size (num. modules) |
|---|---|
| ./CorrecBicorPow12 | 23 |
[1] “”
Select modules
Es seleccionen els móduls en funció de la correlació amb el fenotip
- Filter correlation > 0.4
GENOTYPE
6 modules filtered: black, red, blue, darkred, grey60, grey
Module black number of genes: 234
number of annotated genes: 172
number of KEGG: 7
Module red number of genes: 425
number of annotated genes: 356
number of KEGG: 10
Module blue number of genes: 5868
number of annotated genes: 3362
number of KEGG: 96
Module darkred number of genes: 3
number of annotated genes: 2
No KEGG
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 6
Module grey number of genes: 2324
number of annotated genes: 1251
number of KEGG: 0
Table with number of common KEGG between modules
| GENOTYPE_black | GENOTYPE_blue | GENOTYPE_grey | GENOTYPE_grey60 | GENOTYPE_red | |
|---|---|---|---|---|---|
| GENOTYPE_black | 205 | 205 | 192 | 4 | 190 |
| GENOTYPE_blue | 205 | 317 | 292 | 6 | 253 |
| GENOTYPE_grey | 192 | 292 | 293 | 6 | 237 |
| GENOTYPE_grey60 | 4 | 6 | 6 | 6 | 6 |
| GENOTYPE_red | 190 | 253 | 237 | 6 | 254 |
Enrichment by module
Common enrichment between module
DIET
1 modules filtered: greenyellow
Module greenyellow number of genes: 33
number of annotated genes: 36
number of KEGG: 2
Enrichment by module
Common enrichment between module
CHD
4 modules filtered: green, black, blue, grey60
Module green number of genes: 415
number of annotated genes: 279
number of KEGG: 7
Module black number of genes: 234
number of annotated genes: 172
number of KEGG: 7
Module blue number of genes: 5868
number of annotated genes: 3362
number of KEGG: 96
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 6
Table with number of common KEGG between modules
| CHD_black | CHD_blue | CHD_green | CHD_grey60 | |
|---|---|---|---|---|
| CHD_black | 205 | 205 | 162 | 4 |
| CHD_blue | 205 | 317 | 205 | 6 |
| CHD_green | 162 | 205 | 205 | 6 |
| CHD_grey60 | 4 | 6 | 6 | 6 |
Enrichment by module
Common enrichment between module
MotherGEN
11 modules filtered: green, magenta, red, yellow, tan, salmon, darkred, grey60, cyan, brown, turquoise
Module green number of genes: 415
number of annotated genes: 279
number of KEGG: 7
Module magenta number of genes: 132
number of annotated genes: 91
number of KEGG: 2
Module red number of genes: 425
number of annotated genes: 356
number of KEGG: 10
Module yellow number of genes: 2785
number of annotated genes: 1575
number of KEGG: 0
Module tan number of genes: 9
number of annotated genes: 4
number of KEGG: 5
Module salmon number of genes: 7
number of annotated genes: 4
number of KEGG: 5
Module darkred number of genes: 3
number of annotated genes: 2
No KEGG
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 6
Module cyan number of genes: 14
number of annotated genes: 8
number of KEGG: 10
Module brown number of genes: 4926
number of annotated genes: 3506
number of KEGG: 4
Module turquoise number of genes: 10794
number of annotated genes: 6551
number of KEGG: 16
Table with number of common KEGG between modules
| MotherGEN_brown | MotherGEN_cyan | MotherGEN_green | MotherGEN_grey60 | MotherGEN_magenta | MotherGEN_red | MotherGEN_salmon | MotherGEN_tan | MotherGEN_turquoise | MotherGEN_yellow | |
|---|---|---|---|---|---|---|---|---|---|---|
| MotherGEN_brown | 318 | 11 | 205 | 6 | 125 | 254 | 5 | 5 | 318 | 308 |
| MotherGEN_cyan | 11 | 11 | 9 | 0 | 6 | 10 | 0 | 0 | 11 | 11 |
| MotherGEN_green | 205 | 9 | 205 | 6 | 98 | 182 | 4 | 3 | 205 | 205 |
| MotherGEN_grey60 | 6 | 0 | 6 | 6 | 3 | 6 | 0 | 0 | 6 | 6 |
| MotherGEN_magenta | 125 | 6 | 98 | 3 | 125 | 117 | 1 | 2 | 125 | 125 |
| MotherGEN_red | 254 | 10 | 182 | 6 | 117 | 254 | 5 | 5 | 254 | 250 |
| MotherGEN_salmon | 5 | 0 | 4 | 0 | 1 | 5 | 5 | 1 | 5 | 5 |
| MotherGEN_tan | 5 | 0 | 3 | 0 | 2 | 5 | 1 | 5 | 5 | 5 |
| MotherGEN_turquoise | 318 | 11 | 205 | 6 | 125 | 254 | 5 | 5 | 318 | 308 |
| MotherGEN_yellow | 308 | 11 | 205 | 6 | 125 | 250 | 5 | 5 | 308 | 308 |
Enrichment by module
Common enrichment between module
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