Base de dades descarregada 56289
| file | size (num. modules) |
|---|---|
| ./CorrecBicorPow12 | 23 |
[1] “”
Select modules
Es seleccionen els móduls en funció de la correlació amb el fenotip
- Filter correlation > 0.4
GENOTYPE
6 modules filtered: black, red, blue, darkred, grey60, grey
Module black number of genes: 234
number of annotated genes: 172
number of KEGG: 23
Module red number of genes: 425
number of annotated genes: 356
number of KEGG: 5
Module blue number of genes: 5868
number of annotated genes: 3362
number of KEGG: 27
Module darkred number of genes: 3
number of annotated genes: 2
No KEGG
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 17
Module grey number of genes: 2324
number of annotated genes: 1251
number of KEGG: 6
Table with number of common KEGG between modules
| GENOTYPE_black | GENOTYPE_blue | GENOTYPE_grey | GENOTYPE_grey60 | GENOTYPE_red | |
|---|---|---|---|---|---|
| GENOTYPE_black | 359 | 355 | 307 | 10 | 285 |
| GENOTYPE_blue | 355 | 982 | 779 | 17 | 594 |
| GENOTYPE_grey | 307 | 779 | 801 | 15 | 513 |
| GENOTYPE_grey60 | 10 | 17 | 15 | 17 | 16 |
| GENOTYPE_red | 285 | 594 | 513 | 16 | 609 |
Enrichment by module
Common enrichment between module
DIET
1 modules filtered: greenyellow
Module greenyellow number of genes: 33
number of annotated genes: 36
number of KEGG: 11
Enrichment by module
Common enrichment between module
CHD
4 modules filtered: green, black, blue, grey60
Module green number of genes: 415
number of annotated genes: 279
number of KEGG: 22
Module black number of genes: 234
number of annotated genes: 172
number of KEGG: 23
Module blue number of genes: 5868
number of annotated genes: 3362
number of KEGG: 27
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 17
Table with number of common KEGG between modules
| CHD_black | CHD_blue | CHD_green | CHD_grey60 | |
|---|---|---|---|---|
| CHD_black | 359 | 355 | 258 | 10 |
| CHD_blue | 355 | 982 | 500 | 17 |
| CHD_green | 258 | 500 | 501 | 15 |
| CHD_grey60 | 10 | 17 | 15 | 17 |
Enrichment by module
Common enrichment between module
MotherGEN
11 modules filtered: green, magenta, red, yellow, tan, salmon, darkred, grey60, cyan, brown, turquoise
Module green number of genes: 415
number of annotated genes: 279
number of KEGG: 22
Module magenta number of genes: 132
number of annotated genes: 91
number of KEGG: 3
Module red number of genes: 425
number of annotated genes: 356
number of KEGG: 5
Module yellow number of genes: 2785
number of annotated genes: 1575
number of KEGG: 0
Module tan number of genes: 9
number of annotated genes: 4
number of KEGG: 7
Module salmon number of genes: 7
number of annotated genes: 4
number of KEGG: 1
Module darkred number of genes: 3
number of annotated genes: 2
No KEGG
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 17
Module cyan number of genes: 14
number of annotated genes: 8
number of KEGG: 4
Module brown number of genes: 4926
number of annotated genes: 3506
number of KEGG: 0
Module turquoise number of genes: 10794
number of annotated genes: 6551
number of KEGG: 1
Table with number of common KEGG between modules
| MotherGEN_brown | MotherGEN_cyan | MotherGEN_green | MotherGEN_grey60 | MotherGEN_magenta | MotherGEN_red | MotherGEN_salmon | MotherGEN_tan | MotherGEN_turquoise | MotherGEN_yellow | |
|---|---|---|---|---|---|---|---|---|---|---|
| MotherGEN_brown | 981 | 4 | 485 | 17 | 155 | 592 | 1 | 8 | 972 | 768 |
| MotherGEN_cyan | 4 | 4 | 4 | 0 | 2 | 4 | 0 | 0 | 4 | 3 |
| MotherGEN_green | 485 | 4 | 501 | 15 | 124 | 371 | 0 | 5 | 499 | 442 |
| MotherGEN_grey60 | 17 | 0 | 15 | 17 | 9 | 16 | 0 | 0 | 17 | 17 |
| MotherGEN_magenta | 155 | 2 | 124 | 9 | 161 | 132 | 0 | 1 | 161 | 156 |
| MotherGEN_red | 592 | 4 | 371 | 16 | 132 | 609 | 1 | 7 | 604 | 516 |
| MotherGEN_salmon | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 |
| MotherGEN_tan | 8 | 0 | 5 | 0 | 1 | 7 | 0 | 8 | 8 | 8 |
| MotherGEN_turquoise | 972 | 4 | 499 | 17 | 161 | 604 | 1 | 8 | 1006 | 790 |
| MotherGEN_yellow | 768 | 3 | 442 | 17 | 156 | 516 | 1 | 8 | 790 | 797 |
Enrichment by module
Common enrichment between module
`