Base de dades descarregada 56289
| file | size (num. modules) |
|---|---|
| ./CorrecBicorPow12 | 23 |
[1] “”
Select modules
Es seleccionen els móduls en funció de la correlació amb el fenotip
- Filter correlation > 0.4
GENOTYPE
6 modules filtered: black, red, blue, darkred, grey60, grey
Module black number of genes: 234
number of annotated genes: 172
number of KEGG: 74
Module red number of genes: 425
number of annotated genes: 356
number of KEGG: 511
Module blue number of genes: 5868
number of annotated genes: 3362
number of KEGG: 1030
Module darkred number of genes: 3
number of annotated genes: 2
number of KEGG: 33
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 39
Module grey number of genes: 2324
number of annotated genes: 1251
number of KEGG: 52
Table with number of common KEGG between modules
| GENOTYPE_black | GENOTYPE_blue | GENOTYPE_darkred | GENOTYPE_grey | GENOTYPE_grey60 | GENOTYPE_red | |
|---|---|---|---|---|---|---|
| GENOTYPE_black | 74 | 16 | 0 | 0 | 0 | 5 |
| GENOTYPE_blue | 16 | 1030 | 5 | 19 | 20 | 177 |
| GENOTYPE_darkred | 0 | 5 | 33 | 0 | 0 | 10 |
| GENOTYPE_grey | 0 | 19 | 0 | 52 | 0 | 4 |
| GENOTYPE_grey60 | 0 | 20 | 0 | 0 | 39 | 15 |
| GENOTYPE_red | 5 | 177 | 10 | 4 | 15 | 511 |
Enrichment by module
Common enrichment between module
DIET
1 modules filtered: greenyellow
Module greenyellow number of genes: 33
number of annotated genes: 36
number of KEGG: 29
Enrichment by module
Common enrichment between module
CHD
4 modules filtered: green, black, blue, grey60
Module green number of genes: 415
number of annotated genes: 279
number of KEGG: 174
Module black number of genes: 234
number of annotated genes: 172
number of KEGG: 74
Module blue number of genes: 5868
number of annotated genes: 3362
number of KEGG: 1030
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 39
Table with number of common KEGG between modules
| CHD_black | CHD_blue | CHD_green | CHD_grey60 | |
|---|---|---|---|---|
| CHD_black | 74 | 16 | 8 | 0 |
| CHD_blue | 16 | 1030 | 44 | 20 |
| CHD_green | 8 | 44 | 174 | 6 |
| CHD_grey60 | 0 | 20 | 6 | 39 |
Enrichment by module
Common enrichment between module
MotherGEN
11 modules filtered: green, magenta, red, yellow, tan, salmon, darkred, grey60, cyan, brown, turquoise
Module green number of genes: 415
number of annotated genes: 279
number of KEGG: 174
Module magenta number of genes: 132
number of annotated genes: 91
number of KEGG: 126
Module red number of genes: 425
number of annotated genes: 356
number of KEGG: 511
Module yellow number of genes: 2785
number of annotated genes: 1575
number of KEGG: 22
Module tan number of genes: 9
number of annotated genes: 4
number of KEGG: 332
Module salmon number of genes: 7
number of annotated genes: 4
number of KEGG: 60
Module darkred number of genes: 3
number of annotated genes: 2
number of KEGG: 33
Module grey60 number of genes: 40
number of annotated genes: 16
number of KEGG: 39
Module cyan number of genes: 14
number of annotated genes: 8
number of KEGG: 65
Module brown number of genes: 4926
number of annotated genes: 3506
number of KEGG: 628
Module turquoise number of genes: 10794
number of annotated genes: 6551
number of KEGG: 1297
Table with number of common KEGG between modules
| MotherGEN_brown | MotherGEN_cyan | MotherGEN_darkred | MotherGEN_green | MotherGEN_grey60 | MotherGEN_magenta | MotherGEN_red | MotherGEN_salmon | MotherGEN_tan | MotherGEN_turquoise | MotherGEN_yellow | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MotherGEN_brown | 628 | 13 | 14 | 43 | 6 | 11 | 87 | 9 | 42 | 143 | 4 |
| MotherGEN_cyan | 13 | 65 | 0 | 7 | 0 | 5 | 8 | 0 | 2 | 20 | 0 |
| MotherGEN_darkred | 14 | 0 | 33 | 2 | 0 | 0 | 10 | 1 | 2 | 16 | 0 |
| MotherGEN_green | 43 | 7 | 2 | 174 | 6 | 4 | 32 | 2 | 1 | 21 | 1 |
| MotherGEN_grey60 | 6 | 0 | 0 | 6 | 39 | 2 | 15 | 0 | 0 | 6 | 1 |
| MotherGEN_magenta | 11 | 5 | 0 | 4 | 2 | 126 | 15 | 0 | 5 | 19 | 0 |
| MotherGEN_red | 87 | 8 | 10 | 32 | 15 | 15 | 511 | 0 | 35 | 130 | 1 |
| MotherGEN_salmon | 9 | 0 | 1 | 2 | 0 | 0 | 0 | 60 | 3 | 26 | 0 |
| MotherGEN_tan | 42 | 2 | 2 | 1 | 0 | 5 | 35 | 3 | 332 | 93 | 1 |
| MotherGEN_turquoise | 143 | 20 | 16 | 21 | 6 | 19 | 130 | 26 | 93 | 1297 | 0 |
| MotherGEN_yellow | 4 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 22 |
Enrichment by module
Common enrichment between module
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