Lab Week 8: Inference for numerical data

download.file("http://www.openintro.org/stat/data/nc.RData", destfile = "nc.RData")
load("nc.RData")

Exercise 1

Births recorded in the state of North Carolina. There are 1000 observations/samples or cases.

summary(nc)
##       fage            mage            mature        weeks             premie   
##  Min.   :14.00   Min.   :13   mature mom :133   Min.   :20.00   full term:846  
##  1st Qu.:25.00   1st Qu.:22   younger mom:867   1st Qu.:37.00   premie   :152  
##  Median :30.00   Median :27                     Median :39.00   NA's     :  2  
##  Mean   :30.26   Mean   :27                     Mean   :38.33                  
##  3rd Qu.:35.00   3rd Qu.:32                     3rd Qu.:40.00                  
##  Max.   :55.00   Max.   :50                     Max.   :45.00                  
##  NA's   :171                                    NA's   :2                      
##      visits            marital        gained          weight      
##  Min.   : 0.0   married    :386   Min.   : 0.00   Min.   : 1.000  
##  1st Qu.:10.0   not married:613   1st Qu.:20.00   1st Qu.: 6.380  
##  Median :12.0   NA's       :  1   Median :30.00   Median : 7.310  
##  Mean   :12.1                     Mean   :30.33   Mean   : 7.101  
##  3rd Qu.:15.0                     3rd Qu.:38.00   3rd Qu.: 8.060  
##  Max.   :30.0                     Max.   :85.00   Max.   :11.750  
##  NA's   :9                        NA's   :27                      
##  lowbirthweight    gender          habit          whitemom  
##  low    :111    female:503   nonsmoker:873   not white:284  
##  not low:889    male  :497   smoker   :126   white    :714  
##                              NA's     :  1   NA's     :  2  
##                                                             
##                                                             
##                                                             
## 

Exercise 2

plot(nc$habit, nc$weight, main = " Mother smoking habits VS Newborn weight gain")

by(nc$weight, nc$habit, mean)
## nc$habit: nonsmoker
## [1] 7.144273
## ------------------------------------------------------------ 
## nc$habit: smoker
## [1] 6.82873

Exercise 3

by(nc$weight, nc$habit, length)
## nc$habit: nonsmoker
## [1] 873
## ------------------------------------------------------------ 
## nc$habit: smoker
## [1] 126

Exercise 4

Null Hypothesis: There is no difference in mean birth weight for mothers in the smoking and non-smoking groups. Alternative Hypothesis: There is a difference in mean birth weight for mothers in the smoking and non- smoking groups.

inference(y = nc$weight, x = nc$habit, est = "mean", type = "ht", null = 0, 
          alternative = "twosided", method = "theoretical")
## Response variable: numerical, Explanatory variable: categorical
## Difference between two means
## Summary statistics:
## n_nonsmoker = 873, mean_nonsmoker = 7.1443, sd_nonsmoker = 1.5187
## n_smoker = 126, mean_smoker = 6.8287, sd_smoker = 1.3862
## Observed difference between means (nonsmoker-smoker) = 0.3155
## 
## H0: mu_nonsmoker - mu_smoker = 0 
## HA: mu_nonsmoker - mu_smoker != 0 
## Standard error = 0.134 
## Test statistic: Z =  2.359 
## p-value =  0.0184

Exercise 5

inference(y = nc$weight, x = nc$habit, est = "mean", type = "ci", null = 0, 
          alternative = "twosided", method = "theoretical")
## Response variable: numerical, Explanatory variable: categorical
## Difference between two means
## Summary statistics:
## n_nonsmoker = 873, mean_nonsmoker = 7.1443, sd_nonsmoker = 1.5187
## n_smoker = 126, mean_smoker = 6.8287, sd_smoker = 1.3862

## Observed difference between means (nonsmoker-smoker) = 0.3155
## 
## Standard error = 0.1338 
## 95 % Confidence interval = ( 0.0534 , 0.5777 )
inference(y = nc$weight, x = nc$habit, est = "mean", type = "ci", null = 0, 
          alternative = "twosided", method = "theoretical", 
          order = c("smoker","nonsmoker"))
## Response variable: numerical, Explanatory variable: categorical
## Difference between two means
## Summary statistics:
## n_smoker = 126, mean_smoker = 6.8287, sd_smoker = 1.3862
## n_nonsmoker = 873, mean_nonsmoker = 7.1443, sd_nonsmoker = 1.5187

## Observed difference between means (smoker-nonsmoker) = -0.3155
## 
## Standard error = 0.1338 
## 95 % Confidence interval = ( -0.5777 , -0.0534 )

On your Own

Number 1

inference(y = nc$weeks, est = "mean", type = "ci", null = 0, 
          alternative = "twosided", method = "theoretical")
## Single mean 
## Summary statistics:

## mean = 38.3347 ;  sd = 2.9316 ;  n = 998 
## Standard error = 0.0928 
## 95 % Confidence interval = ( 38.1528 , 38.5165 )

Number 2

inference(y = nc$weeks, est = "mean", type = "ci", null = 0, 
          alternative = "twosided", method = "theoretical", conflevel = 0.90)
## Single mean 
## Summary statistics:

## mean = 38.3347 ;  sd = 2.9316 ;  n = 998 
## Standard error = 0.0928 
## 90 % Confidence interval = ( 38.182 , 38.4873 )

Number 3

inference(y = nc$gained, x = nc$mature, est = "mean", type = "ht", null = 0, 
          alternative = "twosided", method = "theoretical")
## Response variable: numerical, Explanatory variable: categorical
## Difference between two means
## Summary statistics:
## n_mature mom = 129, mean_mature mom = 28.7907, sd_mature mom = 13.4824
## n_younger mom = 844, mean_younger mom = 30.5604, sd_younger mom = 14.3469
## Observed difference between means (mature mom-younger mom) = -1.7697
## 
## H0: mu_mature mom - mu_younger mom = 0 
## HA: mu_mature mom - mu_younger mom != 0 
## Standard error = 1.286 
## Test statistic: Z =  -1.376 
## p-value =  0.1686

Number 4

by(nc$mage, nc$mature, range)
## nc$mature: mature mom
## [1] 35 50
## ------------------------------------------------------------ 
## nc$mature: younger mom
## [1] 13 34

I split the mother’s age variable into the maturity groups, then I took the range of each of those groups, using range.

Number 5

Question: Does the mothers habit affect if the baby will be born prematurely (length of pregnancy)?

Null Hypothesis: The mothers habit does not affect the length of the pregnancy.

Alternative Hypothesis: The mothers habits does affect the length of the pregnancy.

inference(nc$weeks, nc$habit, est = "mean", type = "ht", null = 0, 
          alternative = "twosided", method = "theoretical")
## Response variable: numerical, Explanatory variable: categorical
## Difference between two means
## Summary statistics:
## n_nonsmoker = 872, mean_nonsmoker = 38.3188, sd_nonsmoker = 2.9936
## n_smoker = 126, mean_smoker = 38.4444, sd_smoker = 2.4676
## Observed difference between means (nonsmoker-smoker) = -0.1256
## 
## H0: mu_nonsmoker - mu_smoker = 0 
## HA: mu_nonsmoker - mu_smoker != 0 
## Standard error = 0.242 
## Test statistic: Z =  -0.519 
## p-value =  0.6038

Since the p-value is (.6038) >.10 we fail to reject the null. Meaning that there is no affect to length of pregnancy between smokers and non smokers.