After screening for inversions, we can view a table of groups.
|
Genoform
|
Count
|
Representative
|
|
A
|
427
|
AP020315.1
|
|
B
|
2
|
NC_021670.1
|
|
C
|
1
|
NZ_AP017377.1
|
|
D
|
2
|
NZ_AP017891.1
|
|
E
|
1
|
NZ_AP019306.1
|
|
F
|
1
|
NZ_AP020320.1
|
|
G
|
1
|
NZ_CP009681.1
|
|
H
|
3
|
NZ_CP015817.1
|
|
I
|
1
|
NZ_CP018629.1
|
|
J
|
1
|
NZ_CP020656.1
|
|
K
|
1
|
NZ_CP020713.1
|
|
L
|
1
|
NZ_CP020714.1
|
|
M
|
1
|
NZ_CP020960.1
|
|
N
|
1
|
NZ_CP022893.1
|
|
O
|
1
|
NZ_CP022894.1
|
|
P
|
2
|
NZ_CP022903.1
|
|
Q
|
1
|
NZ_CP022905.1
|
|
R
|
3
|
NZ_CP026961.1
|
|
S
|
1
|
NZ_CP029629.1
|
|
T
|
1
|
NZ_CP029663.1
|
|
U
|
2
|
NZ_CP030136.1
|
|
V
|
1
|
NZ_CP031673.1
|
|
W
|
1
|
NZ_CP031838.1
|
|
X
|
1
|
NZ_CP043389.1
|
|
Y
|
1
|
NZ_LN626917.1
|
|
Z
|
1
|
NZ_LR134090.1
|
|
AA
|
1
|
NZ_LT992462.1
|
Remove D, J, K, L and M then Generate the inversion matrix
|
id
|
A
|
B
|
C
|
E
|
F
|
G
|
H
|
I
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Y
|
Z
|
AA
|
|
A
|
0
|
1
|
1
|
1
|
1
|
1
|
1
|
2
|
1
|
1
|
2
|
1
|
1
|
1
|
1
|
1
|
1
|
1
|
1
|
1
|
1
|
1
|
|
B
|
1
|
0
|
2
|
2
|
2
|
2
|
2
|
3
|
2
|
2
|
3
|
2
|
1
|
2
|
2
|
2
|
2
|
2
|
2
|
1
|
1
|
1
|
|
C
|
1
|
2
|
0
|
2
|
2
|
2
|
1
|
3
|
1
|
1
|
2
|
1
|
1
|
2
|
1
|
2
|
2
|
2
|
1
|
2
|
1
|
1
|
|
E
|
1
|
2
|
2
|
0
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
1
|
1
|
1
|
2
|
2
|
2
|
2
|
|
F
|
1
|
2
|
2
|
2
|
0
|
1
|
1
|
2
|
1
|
1
|
2
|
1
|
2
|
1
|
2
|
2
|
2
|
2
|
1
|
2
|
2
|
1
|
|
G
|
1
|
2
|
2
|
2
|
1
|
0
|
1
|
1
|
1
|
1
|
2
|
1
|
1
|
1
|
2
|
2
|
1
|
2
|
2
|
2
|
2
|
1
|
|
H
|
1
|
2
|
1
|
2
|
1
|
1
|
0
|
2
|
1
|
1
|
2
|
1
|
2
|
2
|
1
|
2
|
2
|
2
|
1
|
1
|
2
|
1
|
|
I
|
2
|
3
|
3
|
2
|
2
|
1
|
2
|
0
|
2
|
2
|
3
|
2
|
3
|
2
|
3
|
2
|
2
|
1
|
3
|
3
|
3
|
2
|
|
N
|
1
|
2
|
1
|
2
|
1
|
1
|
1
|
2
|
0
|
1
|
1
|
1
|
2
|
2
|
1
|
2
|
2
|
2
|
1
|
2
|
2
|
1
|
|
O
|
1
|
2
|
1
|
2
|
1
|
1
|
1
|
2
|
1
|
0
|
1
|
1
|
2
|
2
|
1
|
2
|
2
|
2
|
1
|
2
|
2
|
1
|
|
P
|
2
|
3
|
2
|
2
|
2
|
2
|
2
|
3
|
1
|
1
|
0
|
1
|
3
|
3
|
2
|
3
|
2
|
3
|
2
|
3
|
3
|
2
|
|
Q
|
1
|
2
|
1
|
2
|
1
|
1
|
1
|
2
|
1
|
1
|
1
|
0
|
2
|
2
|
1
|
2
|
2
|
2
|
1
|
2
|
2
|
1
|
|
R
|
1
|
1
|
1
|
2
|
2
|
1
|
2
|
3
|
2
|
2
|
3
|
2
|
0
|
2
|
1
|
2
|
2
|
2
|
1
|
1
|
1
|
1
|
|
S
|
1
|
2
|
2
|
2
|
1
|
1
|
2
|
2
|
2
|
2
|
3
|
2
|
2
|
0
|
2
|
2
|
2
|
2
|
1
|
2
|
2
|
1
|
|
T
|
1
|
2
|
1
|
2
|
2
|
2
|
1
|
3
|
1
|
1
|
2
|
1
|
1
|
2
|
0
|
2
|
2
|
2
|
1
|
2
|
1
|
1
|
|
U
|
1
|
2
|
2
|
1
|
2
|
2
|
2
|
2
|
2
|
2
|
3
|
2
|
2
|
2
|
2
|
0
|
2
|
1
|
2
|
2
|
2
|
2
|
|
V
|
1
|
2
|
2
|
1
|
2
|
1
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
2
|
0
|
2
|
2
|
2
|
2
|
1
|
|
W
|
1
|
2
|
2
|
1
|
2
|
2
|
2
|
1
|
2
|
2
|
3
|
2
|
2
|
2
|
2
|
1
|
2
|
0
|
2
|
2
|
2
|
2
|
|
X
|
1
|
2
|
1
|
2
|
1
|
2
|
1
|
3
|
1
|
1
|
2
|
1
|
1
|
1
|
1
|
2
|
2
|
2
|
0
|
2
|
1
|
1
|
|
Y
|
1
|
1
|
2
|
2
|
2
|
2
|
1
|
3
|
2
|
2
|
3
|
2
|
1
|
2
|
2
|
2
|
2
|
2
|
2
|
0
|
1
|
1
|
|
Z
|
1
|
1
|
1
|
2
|
2
|
2
|
2
|
3
|
2
|
2
|
3
|
2
|
1
|
2
|
1
|
2
|
2
|
2
|
1
|
1
|
0
|
1
|
|
AA
|
1
|
1
|
1
|
2
|
1
|
1
|
1
|
2
|
1
|
1
|
2
|
1
|
1
|
1
|
1
|
2
|
1
|
2
|
1
|
1
|
1
|
0
|
To show this relationship, we can also view this matrix as a dendrogram
Groups with fewer inversions cluster together
The same graph is a bit nicer to visualize as a circle
