Clinical data - checking non TCGA/TARGET projects

1 BEATAML1.0-COHORT

2 BEATAML1.0-CRENOLANIB

3 CGCI-BLGSP

4 CPTAC-3

5 CTSP-DLBCL1

6 FM-AD

7 HCMI-CMDC

8 MMRF-COMMPASS

9 NCICCR-DLBCL

10 ORGANOID-PANCREATIC

11 VAREPOP-APOLLO

12 API URLs

## [1] "BEATAML1.0-COHORT"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22BEATAML1.0-COHORT%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "BEATAML1.0-CRENOLANIB"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=56&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22BEATAML1.0-CRENOLANIB%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "CGCI-BLGSP"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=117&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22CGCI-BLGSP%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "CPTAC-3"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22CPTAC-3%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "CTSP-DLBCL1"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22CTSP-DLBCL1%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "FM-AD"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=18004&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22FM-AD%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "HCMI-CMDC"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22HCMI-CMDC%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "MMRF-COMMPASS"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22MMRF-COMMPASS%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "NCICCR-DLBCL"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22NCICCR-DLBCL%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "ORGANOID-PANCREATIC"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22ORGANOID-PANCREATIC%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D

## [1] "VAREPOP-APOLLO"

## https://api.gdc.cancer.gov/cases/?pretty=true&expand=diagnoses,diagnoses.treatments,annotations,family_histories,demographic,exposures&size=&filters=%7B%22op%22:%22and%22,%22content%22:[%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22cases.project.project_id%22,%22value%22:[%22VAREPOP-APOLLO%22]%7D%7D,%7B%22op%22:%22in%22,%22content%22:%7B%22field%22:%22files.data_category%22,%22value%22:[%22Clinical%22]%7D%7D]%7D