Introduction to ggplot2

2.1 A worked example

This is the beginning of a new plot, where we will continue to add data to a graph. Layering more data on top of eachother to get more data in the graph.

# load data
data(CPS85 , package = "mosaicData")

2.1.1 ggplot

This is where the graph will be set up. What the frame will look like, and how the graph will be measured.

# specify dataset and mapping
library(ggplot2)
ggplot(data = CPS85,
       mapping = aes(x = exper, y = wage))

We want the x axis and y axis after this point.

2.1.2 geoms

This is where the data will begin to come in, the points, lines, bars, ext.

# add points
ggplot(data = CPS85,
       mapping = aes(x = exper, y = wage)) +
  geom_point()

We see that there is an outlier, we will delte this outlier before continuing.

# delete outlier
library(dplyr)

## 
## Attaching package: 'dplyr'

## The following objects are masked from 'package:stats':
## 
##     filter, lag

## The following objects are masked from 'package:base':
## 
##     intersect, setdiff, setequal, union

plotdata <- filter(CPS85, wage < 40)

# redraw scatterplot
ggplot(data = plotdata,
       mapping = aes(x = exper, y = wage)) +
  geom_point()

This is where we will add color, tranparency, ext to the data.

# make points blue, larger, and semi-transparent
ggplot(data = plotdata,
       mapping = aes(x = exper, y = wage)) +
  geom_point(color = "cornflowerblue",
             alpha = .7,
             size = 3)

This is where you will add the line of best fit. This is where you will be able to make the thickness of the line, the color of the line, ext.

# add a line of best fit.
ggplot(data = plotdata,
       mapping = aes(x = exper, y = wage)) +
  geom_point(color = "cornflowerblue",
             alpha = .7,
             size = 3) +
  geom_smooth(method = "lm")

2.1.3 grouping

This is where variables can be catigorized. Male, female, hight, weight, ext.

# indicate sex using color
ggplot(data = plotdata,
       mapping = aes(x = exper, 
                     y = wage,
                     color = sex)) +
  geom_point(alpha = .7,
             size = 3) +
  geom_smooth(method = "lm", 
              se = FALSE, 
              size = 1.5)

2.1.4 scales

This allows you to change around the data. Change the x and y axis, color, ext.

# modify the x and y axes and specify the colors to be used
ggplot(data = plotdata,
       mapping = aes(x = exper, 
                     y = wage,
                     color = sex)) +
  geom_point(alpha = .7,
             size = 3) +
  geom_smooth(method = "lm", 
              se = FALSE, 
              size = 1.5) +
  scale_x_continuous(breaks = seq(0, 60, 10)) +
  scale_y_continuous(breaks = seq(0, 30, 5),
                     label = scales::dollar) +
  scale_color_manual(values = c("indianred3", 
                                "cornflowerblue"))

2.1.5 facets

This allows you to create mini plots for individual data sets.

# reproduce plot for each level of job sector
ggplot(data = plotdata,
       mapping = aes(x = exper, 
                     y = wage,
                     color = sex)) +
  geom_point(alpha = .7) +
  geom_smooth(method = "lm", 
              se = FALSE) +
  scale_x_continuous(breaks = seq(0, 60, 10)) +
  scale_y_continuous(breaks = seq(0, 30, 5),
                     label = scales::dollar) +
  scale_color_manual(values = c("indianred3", 
                                "cornflowerblue")) +
  facet_wrap(~sector)

2.1.6 labels

This is where you can customize lables for your data.

# add informative labels
ggplot(data = plotdata,
       mapping = aes(x = exper, 
                     y = wage,
                     color = sex)) +
  geom_point(alpha = .7) +
  geom_smooth(method = "lm", 
              se = FALSE) +
  scale_x_continuous(breaks = seq(0, 60, 10)) +
  scale_y_continuous(breaks = seq(0, 30, 5),
                     label = scales::dollar) +
  scale_color_manual(values = c("indianred3", 
                                "cornflowerblue")) +
  facet_wrap(~sector) +
  labs(title = "Relationship between wages and experience",
       subtitle = "Current Population Survey",
       caption = "source: http://mosaic-web.org/",
       x = " Years of Experience",
       y = "Hourly Wage",
       color = "Gender")

2.1.7 themes

This is where you can change background color, fonts, grid lines, ext.

# use a minimalist theme
ggplot(data = plotdata,
       mapping = aes(x = exper, 
                     y = wage,
                     color = sex)) +
  geom_point(alpha = .6) +
  geom_smooth(method = "lm", 
              se = FALSE) +
  scale_x_continuous(breaks = seq(0, 60, 10)) +
  scale_y_continuous(breaks = seq(0, 30, 5),
                     label = scales::dollar) +
  scale_color_manual(values = c("indianred3", 
                                "cornflowerblue")) +
  facet_wrap(~sector) +
  labs(title = "Relationship between wages and experience",
       subtitle = "Current Population Survey",
       caption = "source: http://mosaic-web.org/",
       x = " Years of Experience",
       y = "Hourly Wage",
       color = "Gender") +
  theme_minimal()