Summary of Relevant Info
library(knitr)
knitr::include_graphics("/Users/meganwilliams/Desktop/Chart.png")
Summary of Wave 1 Neuropsych Data Merged with CTS Data
## HNDid HNDwave.x PhysicalAssaultEver
## Min. :8031117901 Min. :4 No :633
## 1st Qu.:8151871802 1st Qu.:4 Yes: 88
## Median :8172082501 Median :4
## Mean :8169181024 Mean :4
## 3rd Qu.:8193771801 3rd Qu.:4
## Max. :8224304901 Max. :4
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## PhysicalAssaultPastYear PsychAggressionEver PsychAggressionPastYear
## No :685 No :100 No :195
## Yes: 36 Yes:621 Yes:526
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## SexCoercionEver SexCoercionPastYear InjuryEver InjuryPastYear
## No :696 No :705 No :669 No :696
## Yes: 25 Yes: 16 Yes: 52 Yes: 25
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## PhysicalVictimEver PhysicalVictimPastYear PsychVictimEver
## No :626 No :689 No :121
## Yes: 95 Yes: 32 Yes:600
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## PsychVictimPastYear SexVictimEver SexVictimPastYear InjuryVictimEver
## No :206 No :694 No :705 No :649
## Yes:515 Yes: 27 Yes: 16 Yes: 72
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## InjuryVictimPastYear HNDwave.y Attention BVRadd
## No :681 Min. :1 Min. : 0.000000 Min. :0.00000000
## Yes: 40 1st Qu.:1 1st Qu.: 6.000000 1st Qu.:0.00000000
## Median :1 Median : 7.000000 Median :0.00000000
## Mean :1 Mean : 7.060904 Mean :0.00913242
## 3rd Qu.:1 3rd Qu.: 9.000000 3rd Qu.:0.00000000
## Max. :1 Max. :10.000000 Max. :1.00000000
## NA's :212 NA's :64
## BVRdes BVRdis BVRfig
## Min. : 0.000000 Min. : 0.000000 Min. : 0.00000
## 1st Qu.: 2.000000 1st Qu.: 1.000000 1st Qu.: 2.00000
## Median : 4.000000 Median : 3.000000 Median : 5.00000
## Mean : 4.070015 Mean : 3.496195 Mean : 5.61035
## 3rd Qu.: 6.000000 3rd Qu.: 5.000000 3rd Qu.: 8.00000
## Max. :10.000000 Max. :16.000000 Max. :20.00000
## NA's :64 NA's :64 NA's :64
## BVRmis BVRomm BVRper
## Min. :0.0000000 Min. :0.0000000 Min. :0.0000000
## 1st Qu.:0.0000000 1st Qu.:0.0000000 1st Qu.:0.0000000
## Median :0.0000000 Median :0.0000000 Median :0.0000000
## Mean :0.3150685 Mean :0.4094368 Mean :0.5920852
## 3rd Qu.:0.0000000 3rd Qu.:0.0000000 3rd Qu.:1.0000000
## Max. :7.0000000 Max. :9.0000000 Max. :5.0000000
## NA's :64 NA's :64 NA's :64
## BVRqui BVRrot BVRsiz
## Min. :0.00000000 Min. :0.0000000 Min. :0.0000000
## 1st Qu.:0.00000000 1st Qu.:0.0000000 1st Qu.:0.0000000
## Median :0.00000000 Median :1.0000000 Median :0.0000000
## Mean :0.00152207 Mean :0.7792999 Mean :0.1445966
## 3rd Qu.:0.00000000 3rd Qu.:1.0000000 3rd Qu.:0.0000000
## Max. :1.00000000 Max. :5.0000000 Max. :5.0000000
## NA's :64 NA's :64 NA's :64
## BVRtot ClockCmdFace ClockCmdHand
## Min. : 0.000000 Min. :0.000000 Min. :0.000000
## 1st Qu.: 2.000000 1st Qu.:2.000000 1st Qu.:3.000000
## Median : 5.000000 Median :2.000000 Median :4.000000
## Mean : 5.745814 Mean :1.975309 Mean :3.445988
## 3rd Qu.: 9.000000 3rd Qu.:2.000000 3rd Qu.:4.000000
## Max. :21.000000 Max. :2.000000 Max. :4.000000
## NA's :64 NA's :73 NA's :73
## ClockCmdNumb ClockCopFace ClockCopHand
## Min. :0.000000 Min. :1.00000 Min. :0.000000
## 1st Qu.:3.000000 1st Qu.:2.00000 1st Qu.:4.000000
## Median :4.000000 Median :2.00000 Median :4.000000
## Mean :3.459877 Mean :1.99768 Mean :3.700696
## 3rd Qu.:4.000000 3rd Qu.:2.00000 3rd Qu.:4.000000
## Max. :4.000000 Max. :2.00000 Max. :4.000000
## NA's :73 NA's :290 NA's :290
## ClockCopNumb CogTester CrdRot
## Min. :2.000000 Length:721 Min. :-7.00000
## 1st Qu.:3.000000 Class1:labelled 1st Qu.:28.00000
## Median :4.000000 Class2:character Median :39.00000
## Mean :3.563805 Mode :character Mean :39.50108
## 3rd Qu.:4.000000 3rd Qu.:51.00000
## Max. :4.000000 Max. :80.00000
## NA's :290 NA's :260
## CrdRotCor CrdRotErr CVLbet
## Min. :10.00000 Min. : 0.000000 Min. :-0.500000
## 1st Qu.:33.00000 1st Qu.: 2.000000 1st Qu.: 1.000000
## Median :44.00000 Median : 4.000000 Median : 2.000000
## Mean :45.10629 Mean : 5.605206 Mean : 1.781312
## 3rd Qu.:55.00000 3rd Qu.: 7.000000 3rd Qu.: 2.500000
## Max. :80.00000 Max. :37.000000 Max. : 4.500000
## NA's :260 NA's :260 NA's :218
## CVLtca CVLtcb DigitSpanBck
## Min. : 7.00000 Min. : 1.000000 Min. : 0.000000
## 1st Qu.:20.00000 1st Qu.: 4.000000 1st Qu.: 4.000000
## Median :25.00000 Median : 6.000000 Median : 6.000000
## Mean :25.14712 Mean : 5.591633 Mean : 5.903021
## 3rd Qu.:30.00000 3rd Qu.: 7.000000 3rd Qu.: 7.000000
## Max. :43.00000 Max. :12.000000 Max. :13.000000
## NA's :218 NA's :219 NA's :92
## DigitSpanBckMax DigitSpanFwd DigitSpanFwdMax
## Min. :2.000000 Min. : 2.000000 Min. :3.000000
## 1st Qu.:4.000000 1st Qu.: 6.000000 1st Qu.:5.000000
## Median :4.000000 Median : 7.000000 Median :6.000000
## Mean :4.428344 Mean : 7.528391 Mean :6.250789
## 3rd Qu.:5.000000 3rd Qu.: 9.000000 3rd Qu.:7.000000
## Max. :8.000000 Max. :14.000000 Max. :9.000000
## NA's :93 NA's :87 NA's :87
## FluencyIntr FluencyPers FluencyWord
## Min. :0.00000000 Min. :0.0000000 Min. : 5.00000
## 1st Qu.:0.00000000 1st Qu.:0.0000000 1st Qu.:15.50000
## Median :0.00000000 Median :0.0000000 Median :19.00000
## Mean :0.02519685 Mean :0.6110236 Mean :19.70079
## 3rd Qu.:0.00000000 3rd Qu.:1.0000000 3rd Qu.:23.00000
## Max. :2.00000000 Max. :6.0000000 Max. :39.00000
## NA's :86 NA's :86 NA's :86
## IdentPicCor IdentPicErr MMSatn
## Min. : 9.00000 Min. :0.0000000 Min. :0.000000
## 1st Qu.:21.00000 1st Qu.:0.0000000 1st Qu.:5.000000
## Median :25.00000 Median :0.0000000 Median :5.000000
## Mean :25.74239 Mean :0.6166329 Mean :4.743265
## 3rd Qu.:30.00000 3rd Qu.:1.0000000 3rd Qu.:5.000000
## Max. :46.00000 Max. :6.0000000 Max. :5.000000
## NA's :228 NA's :228 NA's :90
## MMSdel MMSimm MMSlan
## Min. :0.000000 Min. :1.000000 Min. :3.000000
## 1st Qu.:2.000000 1st Qu.:3.000000 1st Qu.:8.000000
## Median :3.000000 Median :3.000000 Median :8.000000
## Mean :2.651772 Mean :2.990755 Mean :8.112481
## 3rd Qu.:3.000000 3rd Qu.:3.000000 3rd Qu.:9.000000
## Max. :3.000000 Max. :3.000000 Max. :9.000000
## NA's :72 NA's :72 NA's :72
## MMSnvalid MMSorp MMSort MMSspell
## Min. : 0.00000 Min. :3.000000 Min. :3.000000 OK :631
## 1st Qu.:30.00000 1st Qu.:5.000000 1st Qu.:5.000000 Literacy : 13
## Median :30.00000 Median :5.000000 Median :5.000000 ?Literacy: 3
## Mean :29.40819 Mean :4.842835 Mean :4.855162 Language : 1
## 3rd Qu.:30.00000 3rd Qu.:5.000000 3rd Qu.:5.000000 Quit : 1
## Max. :30.00000 Max. :5.000000 Max. :5.000000 (Other) : 0
## NA's :62 NA's :72 NA's :72 NA's : 72
## MMStot MMStotpro TrailsAtestErr
## Min. :15.00000 Min. :18.00000 Min. :0.0000000
## 1st Qu.:27.00000 1st Qu.:27.00000 1st Qu.:0.0000000
## Median :29.00000 Median :29.00000 Median :0.0000000
## Mean :28.06471 Mean :28.18336 Mean :0.2932917
## 3rd Qu.:29.00000 3rd Qu.:29.00000 3rd Qu.:1.0000000
## Max. :30.00000 Max. :30.00000 Max. :4.0000000
## NA's :72 NA's :72 NA's :80
## TrailsAtestSec TrailsBtestErr TrailsBtestSec MISdelcr
## Min. : 11.00000 Min. : 0.0000000 Min. : 27.0000 Min. : NA
## 1st Qu.: 23.00000 1st Qu.: 0.0000000 1st Qu.: 57.0000 1st Qu.: NA
## Median : 29.00000 Median : 0.0000000 Median : 78.0000 Median : NA
## Mean : 32.24181 Mean : 0.8692053 Mean :120.9173 Mean :NaN
## 3rd Qu.: 38.00000 3rd Qu.: 1.0000000 3rd Qu.:116.0000 3rd Qu.: NA
## Max. :164.00000 Max. :13.0000000 Max. :600.0000 Max. : NA
## NA's :80 NA's :117 NA's :80 NA's :721
## MISdelex MISdelfr MISdelin MISexemp MISident
## Min. : NA Min. : NA Min. : NA Min. : NA Min. : NA
## 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA
## Median : NA Median : NA Median : NA Median : NA Median : NA
## Mean :NaN Mean :NaN Mean :NaN Mean :NaN Mean :NaN
## 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA
## Max. : NA Max. : NA Max. : NA Max. : NA Max. : NA
## NA's :721 NA's :721 NA's :721 NA's :721 NA's :721
## MISintru MISloncr MISlonex MISlonfr MISlonin
## Min. : NA Min. : NA Min. : NA Min. : NA Min. : NA
## 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA
## Median : NA Median : NA Median : NA Median : NA Median : NA
## Mean :NaN Mean :NaN Mean :NaN Mean :NaN Mean :NaN
## 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA
## Max. : NA Max. : NA Max. : NA Max. : NA Max. : NA
## NA's :721 NA's :721 NA's :721 NA's :721 NA's :721
## MISrepet StroopColors StroopMixed StroopWords TrailsAtestErr300
## Min. : NA Min. : NA Min. : NA Min. : NA Min. : NA
## 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA 1st Qu.: NA
## Median : NA Median : NA Median : NA Median : NA Median : NA
## Mean :NaN Mean :NaN Mean :NaN Mean :NaN Mean :NaN
## 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA 3rd Qu.: NA
## Max. : NA Max. : NA Max. : NA Max. : NA Max. : NA
## NA's :721 NA's :721 NA's :721 NA's :721 NA's :721
## TrailsBtestErr300 Age
## Min. : NA Min. :30.10000
## 1st Qu.: NA 1st Qu.:39.30000
## Median : NA Median :46.50000
## Mean :NaN Mean :46.58114
## 3rd Qu.: NA 3rd Qu.:53.70000
## Max. : NA Max. :65.90000
## NA's :721
Summary of Wave 3 Neuropsych Data Merged with CTS Data
## HNDid HNDwave.x PhysicalAssaultEver
## Min. :8031117901 Min. :4 No :573
## 1st Qu.:8151836626 1st Qu.:4 Yes: 77
## Median :8172179652 Median :4
## Mean :8169298479 Mean :4
## 3rd Qu.:8193947826 3rd Qu.:4
## Max. :8224304901 Max. :4
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## PhysicalAssaultPastYear PsychAggressionEver PsychAggressionPastYear
## No :618 No : 93 No :178
## Yes: 32 Yes:557 Yes:472
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## SexCoercionEver SexCoercionPastYear InjuryEver InjuryPastYear
## No :628 No :635 No :604 No :627
## Yes: 22 Yes: 15 Yes: 46 Yes: 23
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## PhysicalVictimEver PhysicalVictimPastYear PsychVictimEver
## No :567 No :621 No :114
## Yes: 83 Yes: 29 Yes:536
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## PsychVictimPastYear SexVictimEver SexVictimPastYear InjuryVictimEver
## No :188 No :627 No :636 No :590
## Yes:462 Yes: 23 Yes: 14 Yes: 60
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## InjuryVictimPastYear HNDwave.y Age Attention.3
## No :617 Min. :3 Min. :32.90000 Min. : 0.000000
## Yes: 33 1st Qu.:3 1st Qu.:44.10000 1st Qu.: 5.000000
## Median :3 Median :51.00000 Median : 7.000000
## Mean :3 Mean :51.18646 Mean : 6.743501
## 3rd Qu.:3 3rd Qu.:58.40000 3rd Qu.: 8.000000
## Max. :3 Max. :70.00000 Max. :10.000000
## NA's :73
## TrailsAtestSec.3 TrailsBtestSec.3 CVLtca.3
## Min. : 14.00000 Min. : 25.000 Min. : 0.00000
## 1st Qu.: 23.00000 1st Qu.: 58.000 1st Qu.:14.00000
## Median : 29.00000 Median : 81.000 Median :19.00000
## Mean : 38.92754 Mean :129.521 Mean :19.24633
## 3rd Qu.: 38.00000 3rd Qu.:126.000 3rd Qu.:25.00000
## Max. :600.00000 Max. :600.000 Max. :38.00000
## NA's :29 NA's :30 NA's :37
## CVLtcb.3 CVLbet.3 DigitSpanFwd.3
## Min. : 0.000000 Min. :-3.000000 Min. : 2.00000
## 1st Qu.: 2.000000 1st Qu.: 1.000000 1st Qu.: 6.00000
## Median : 4.000000 Median : 2.000000 Median : 7.00000
## Mean : 3.991843 Mean : 1.752855 Mean : 7.59823
## 3rd Qu.: 5.000000 3rd Qu.: 2.500000 3rd Qu.: 9.00000
## Max. :11.000000 Max. : 5.500000 Max. :14.00000
## NA's :37 NA's :37 NA's :85
## DigitSpanBck.3 FluencyWord.3 MMStot.3
## Min. : 0.000000 Min. : 7.0000 Min. :20.00000
## 1st Qu.: 4.000000 1st Qu.:16.0000 1st Qu.:27.00000
## Median : 6.000000 Median :19.0000 Median :28.00000
## Mean : 5.901961 Mean :19.8032 Mean :28.07573
## 3rd Qu.: 7.000000 3rd Qu.:24.0000 3rd Qu.:29.00000
## Max. :13.000000 Max. :40.0000 Max. :30.00000
## NA's :89 NA's :25 NA's :69
## StroopColors.3 StroopMixed.3 StroopWords.3
## Min. :23.00000 Min. : 2.00000 Min. :42.00000
## 1st Qu.:55.00000 1st Qu.:26.00000 1st Qu.:73.00000
## Median :64.00000 Median :33.00000 Median :82.00000
## Mean :63.95404 Mean :32.77314 Mean :79.54233
## 3rd Qu.:74.00000 3rd Qu.:39.00000 3rd Qu.:89.00000
## Max. :95.00000 Max. :66.00000 Max. :95.00000
## NA's :106 NA's :99 NA's :272
Number of Participants with Complete Data on CTS AND EITHER Wave 1 Neuropsych Test OR Wave 3 Neuropsych Test
Trails A (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 699 22
Trails B (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 699 22
Animal Naming (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 698 23
CVLT (tca) (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 680 41
CVLT (tcb) (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 680 41
CVLT (bet) (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 680 41
Mini Mental Status Exam (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 693 28
Attention (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 664 57
Digit Span Forward (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 692 29
Digit Span Backward (Complete data on either wave 1 or wave 3 test)
## Complete Incomplete
## 691 30