“An R Markdown (.Rmd) file is a record of your research. It contains the code that a scientist needs to reproduce your work along with the narration that a reader needs to understand your work.” 1

The Basics

Output to a variety of different types of documents

2

Code chunk options to customize how much code you want to display

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  1. https://www.rstudio.com/wp-content/uploads/2016/03/rmarkdown-cheatsheet-2.0.pdf

  2. https://rmarkdown.rstudio.com/authoring_quick_tour.html#using_parameters

  3. https://reproducible-analysis-workshop.readthedocs.io/en/latest/6.RMarkdown-knitr.html