Travis I Zack, Steven E Schumacher, Scott L Carter, Andrew D Cherniack, Gordon Saksena, Barbara Tabak, Michael S Lawrence, Cheng-Zhong Zhang, Jeremiah Wala, Craig H Mermel, Carrie Sougnez, Stacey B Gabriel, Bryan Hernandez, Hui Shen, Peter W Laird, Gad Getz, Matthew Meyerson & Rameen Beroukhim.
Nature Genetics 45, 1134–1140 (2013) doi:10.1038/ng.2760
Published online 26 September 2013
Determining how somatic copy number alterations (SCNAs) promote cancer is an important goal. We characterized SCNA patterns in 4,934 cancers from The Cancer Genome Atlas Pan-Cancer data set.
| Disease | Samples | % |
|---|---|---|
| Bladder | 136 | 2.8% |
| Breast | 872 | 17.7% |
| Colorectal | 585 | 11.9% |
| GBM | 580 | 11.8% |
| Head and neck | 310 | 6.3% |
| Kidney clear cell | 497 | 10.1% |
| AML | 194 | 3.9% |
| Lung adeno | 357 | 7.2% |
| Lung squamous | 344 | 7% |
| Ovarian | 563 | 11.4% |
| Endometrial | 496 | 10.1% |
| pan-cancer | 4934 | 100% |
| Peak Name | Rank | Genomic location | Peak region | GISTIC q-value | Gene count | Target(s) | Frequently mutated genesB |
|---|---|---|---|---|---|---|---|
| CDKN2A | 1 | 9p21.3 | chr9:21865498-22448737 | 0 | 4 | CDKN2AK | CDKN2A = 4.4e-15 |
| STK11 | 2 | 19p13.3 | chr19:1103715-1272039 | 1,46E-238 | 7 | STK11K | STK11 = 2.5e-13 |
| PDE4D | 3 | 5q11.2 | chr5:58260298-59787985 | 2,02E-143 | 3 | PDE4D | |
| PARK2 | 4 | 6q26 | chr6:161693099-163153207 | 5,85E-137 | 1 | PARK2K | |
| LRP1B | 5 | 2q22.1 | chr2:139655617-143637838 | 4,25E-107 | 1 | LRP1B | |
| CSMD1 | 6 | 8p23.2 | chr8:2079140-6262191 | 2,39E-96 | 1 | CSMD1 | |
| 1p36.23 | 7 | 1p36.23 | chr1:7829287-8925111 | 1,23E-93 | 8 | ||
| ARID1A | 8 | 1p36.11 | chr1:26900639-27155421 | 5,74E-87 | 2 | ARID1AK | ARID1A = 1.5e-14 |
| PTEN | 9 | 10q23.31 | chr10:89615138-90034038 | 1,12E-79 | 2 | PTENK | PTEN = 2.2e-15 |
| WWOX | 10 | 16q23.1 | chr16:78129058-79627770 | 8,14E-76 | 1 | WWOX | WWOX = 0.092 |
| RB1 | 11 | 13q14.2 | chr13:48833767-49064807 | 3,88E-75 | 2 | RB1K | RB1 = 1.7e-13 |
| FAM190A | 12 | 4q22.1 | chr4:90844993-93240505 | 9,26E-75 | 1 | FAM190A | |
| 2q37.3 | 13 | 2q37.3T | chr2:241544527-243199373 | 1,77E-70 | 29 | ING5E | |
| 22q13.32 | 14 | 22q13.32T | chr22:48026910-51304566 | 8,20E-65 | 45 | BRD1E, HDAC10E | |
| 11p15.5 | 15 | 11p15.5T | chr11:1-709860 | 1,02E-62 | 34 | SIRT3E, PHRF1E | HRAS = 7.8e-13 |
| LINC00290 | 16 | 4q34.3 | chr4:178911874-183060693 | 1,21E-55 | 1 | LINC00290 | |
| FHIT | 17 | 3p14.2 | chr3:59034763-61547330 | 3,01E-55 | 1 | FHIT | |
| RBFOX1 | 18 | 16p13.3 | chr16:5144019-7771745 | 1,00E-45 | 1 | RBFOX1 | |
| PTPRD | 19 | 9p24.1 | chr9:8310705-12693402 | 3,24E-38 | 1 | PTPRD | |
| 18q23 | 20 | 18q23T | chr18:74979706-78077248 | 1,69E-37 | 12 | ||
| FAT1 | 21 | 4q35.2 | chr4:187475875-188227950 | 6,81E-36 | 1 | FAT1K | FAT1 = 2.4e-15 |
| MPHOSPH8 | 22 | 13q12.11T | chr13:1-20535070 | 2,57E-31 | 10 | MPHOSPH8E | |
| 15q15.1 | 23 | 15q15.1 | chr15:41795901-42068054 | 2,71E-29 | 4 | MGA = 0.0083, RPAP1=0.035 | |
| 11q25 | 24 | 11q25T | chr11:133400280-135006516 | 4,93E-26 | 14 | ||
| 1p13.2 | 25 | 1p13.2 | chr1:110048528-117687124 | 1,69E-25 | 100 | TRIM33E | NRAS=1.8e-13, CD58=0.079 |
| NF1 | 26 | 17q11.2 | chr17:29326736-29722618 | 6,59E-23 | 5 | NF1K | NF1 = 3.3e-13 |
| MACROD2 | 27 | 20p12.1 | chr20:14302876-16036135 | 9,00E-19 | 3 | MACROD2 | |
| 7p22.3 | 28 | 7p22.3T | chr7:1-1496620 | 1,04E-17 | 18 | ||
| 6p25.3 | 29 | 6p25.3 | chr6:1608837-2252425 | 3,01E-17 | 2 | ||
| 21q11.2 | 30 | 21q11.2T | chr21:1-15482604 | 2,34E-14 | 14 | ||
| 9p13.1 | 31 | 9p13.1 | chr9:38619152-71152237 | 9,75E-14 | 48 | ||
| ZNF132 | 32 | 19q13.43T | chr19:58661582-59128983 | 3,77E-13 | 24 | TRIM28E, ZNF132 | |
| 5q15 | 33 | 5q15 | chr5:73236070-114508587 | 8,15E-13 | 156 | APCK, CHD1K | APC=2.6e-13, RASA1=0.0029 |
| MLL3 | 34 | 7q36.1 | chr7:151817415-152136074 | 9,26E-13 | 1 | MLL3K,E | MLL3 = 1.1e-05 |
| 19q13.32 | 35 | 19q13.32 | chr19:47332686-47763284 | 2,38E-12 | 10 | ||
| 15q12 | 36 | 15q12T | chr15:1-32929863 | 3,40E-11 | 155 | OTUD7A = 0.027 | |
| 12q24.33 | 37 | 12q24.33T | chr12:131692956-133851895 | 1,24E-10 | 27 | POLE=3.9e-05, PGAM5=0.038 | |
| 10q26.3 | 38 | 10q26.3T | chr10:135190263-135534747 | 2,09E-10 | 14 | ||
| 6q21 | 39 | 6q21 | chr6:86319089-117076132 | 4,56E-10 | 141 | PRDM1E, HDAC2E, PRDM13E | PRDM1 = 0.00054 |
| PPP2R2A | 40 | 8p21.2 | chr8:25896447-26250295 | 1,78E-09 | 1 | PPP2R2A | |
| IKZF2 | 41 | 2q34 | chr2:211542637-214143899 | 3,24E-09 | 4 | IKZF2K, ERBB4 | ERBB4 = 0.00058 |
| CNTN4 | 42 | 3p26.3T | chr3:1-3100786 | 6,44E-09 | 3 | CNTN4 | |
| 3p12.2 | 43 | 3p12.2 | chr3:75363575-86988125 | 1,22E-07 | 12 | ROBO1, CADM2 | |
| RAD51B | 44 | 14q24.1 | chr14:68275375-69288431 | 1,38E-07 | 2 | RAD51B | ZFP36L1 = 0.0016 |
| 11q23.1 | 45 | 11q23.1 | chr11:105849158-117024891 | 5,31E-07 | 84 | ATMK | ATM=1.4e-06, POU2AF1=0.082 |
| IMMP2L | 46 | 7q31.1 | chr7:109599468-111366370 | 5,74E-07 | 2 | IMMP2L | |
| NEGR1 | 47 | 1p31.1 | chr1:71699756-74522473 | 7,25E-07 | 2 | NEGR1 | |
| BRCA1 | 48 | 17q21.31 | chr17:41178765-41336147 | 7,25E-07 | 2 | BRCA1K | BRCA1 = 3.5e-08 |
| 9q34.3 | 49 | 9q34.3 | chr9:135441810-139646221 | 8,73E-06 | 94 | NOTCH1K, BRD3E, GTF3C4E | NOTCH1=1e-08, RXRA=2.1e-05, COL5A1=0.0022, TSC1=0.012 |
| ANKS1B | 50 | 12q23.1 | chr12:99124001-100431272 | 8,73E-06 | 2 | ANKS1B | |
| DMD | 51 | Xp21.2 | chrX:30865118-34644819 | 5,15E-05 | 4 | DMD | |
| ZMYND11 | 52 | 10p15.3T | chr10:1-857150 | 7,12E-05 | 4 | ZMYND11E | |
| PRKG1 | 53 | 10q11.23 | chr10:52644085-54061437 | 9,79E-05 | 3 | PRKG1 | |
| FOXK2 | 54 | 17q25.3 | chr17:80443432-80574531 | 0,00019271 | 1 | FOXK2 | |
| AGBL4 | 55 | 1p33 | chr1:48935280-50514967 | 0,000219 | 2 | AGBL4 | |
| CDKN1B | 56 | 12p13.1 | chr12:12710990-12966966 | 0,00035777 | 5 | CDKN1BK | CDKN1B = 2.2e-06 |
| 14q32.33 | 57 | 14q32.33T | chr14:94381429-107349540 | 0,00074358 | 227 | SETD3E, TDRD9E | AKT1=2.1e-13, TRAF3=9.7e-05 |
| 14q11.2 | 58 | 14q11.2T | chr14:1-30047530 | 0,0010181 | 162 | PRMT5E, CHD8E | CHD8 = 0.034 |
| 2p25.3 | 59 | 2p25.3T | chr2:1-20072169 | 0,0011137 | 86 | MYCNK | MYCN=0.068 |
| 5q35.3 | 60 | 5q35.3T | chr5:153840473-180915260 | 0,0028515 | 212 | NSD1E, ODZ2 | NPM1=3.5e-13, NSD1=1.9e-09, ZNF454=0.0019, UBLCP1=0.03, GABRB2=0.07 |
| PTTG1IP | 61 | 21q22.3 | chr21:46230687-46306160 | 0,012227 | 1 | PTTG1IP | |
| 22q11.1 | 62 | 22q11.1T | chr22:1-17960585 | 0,020332 | 15 | ||
| SMAD4 | 63 | 18q21.2 | chr18:48472083-48920689 | 0,036866 | 3 | SMAD4K | SMAD4 = 6.6e-15 |
| 17p13.3 | 64 | 17p13.3T | chr17:1-1180022 | 0,040814 | 16 | ||
| 4p16.3 | 65 | 4p16.3T | chr4:1-1243876 | 0,056345 | 27 | ||
| 9p21.2 | 66 | 9p21.2 | chr9:27572512-28982153 | 0,091742 | 3 | ||
| 10q25.1 | 67 | 10q25.1 | chr10:99340084-113910615 | 0,11879 | 137 | HPSE2, SMNDC1E | SMC3=0.00031, GSTO2=0.086 |
| SMYD3 | 68 | 1q44 | chr1:245282267-247110824 | 0,15417 | 8 | SMYD3E | |
| 8p11.21 | 69 | 8p11.21 | chr8:42883855-47753079 | 0,17382 | 4 | ||
| Xp22.33 | 70 | Xp22.33T | chrX:1-11137490 | 0,21462 | 52 | MXRA5 = 0.031 |
Notes
ng.2760-S5.xlsx del_genes.All_cancer
| cytoband | q value | residual q value | wide peak boundaries | genes in wide peak |
|---|---|---|---|---|
| 9p21.3 | 0 | 0 | chr9:21865498-22448737 | CDKN2A,CDKN2B,C9orf53,CDKN2B-AS1 |
| 19p13.3 | 1.46E-238 | 1.46E-238 | chr19:1103715-1272039 | ATP5D,GPX4,STK11,SBNO2,MIDN,CIRBP-AS1,C19orf26 |
| 5q11.2 | 3.18E-156 | 2.02E-143 | chr5:58260298-59787985 | hsa-mir-582,PDE4D,PART1 |
| 6q26 | 5.85E-137 | 5.85E-137 | chr6:161693099-163153207 | PARK2 |
| 2q22.1 | 4.25E-107 | 4.25E-107 | chr2:139655617-143637838 | LRP1B |
| 8p23.2 | 2.39E-96 | 2.39E-96 | chr8:2079140-6262191 | CSMD1 |
| 1p36.23 | 1.67E-178 | 1.23E-93 | chr1:7829287-8925111 | RERE,TNFRSF9,PER3,VAMP3,UTS2,PARK7,SLC45A1,ERRFI1 |
| 1p36.11 | 1.93E-173 | 5.74E-87 | chr1:26900639-27155421 | ARID1A,PIGV |
| 10q23.31 | 1.55E-86 | 1.12E-79 | chr10:89615138-90034038 | PTEN,KLLN |
| 16q23.1 | 8.14E-76 | 8.14E-76 | chr16:78129058-79627770 | WWOX |
| 13q14.2 | 3.01E-91 | 3.88E-75 | chr13:48833767-49064807 | RB1,LPAR6 |
| 4q22.1 | 9.16E-75 | 9.26E-75 | chr4:90844993-93240505 | FAM190A |
| 2q37.3 | 8.65E-100 | 1.77E-70 | chr2:241544527-243199373 | hsa-mir-3133,AGXT,KIF1A,BOK,DTYMK,GPR35,HDLBP,2-Sep,PDCD1,PPP1R7,FARP2,STK25,PASK,ATG4B,SNED1,ANO7,THAP4,GAL3ST2,C2orf54,ING5,NEU4,MTERFD2,LOC200772,CXXC11,AQP12A,AQP12B,D2HGDH,LOC728323,BOK-AS1 |
| 22q13.32 | 8.20E-65 | 8.20E-65 | chr22:48026910-51304566 | ACR,ARSA,CHKB,CPT1B,TYMP,MAPK11,MAPK12,SBF1,PPP6R2,ZBED4,SCO2,RABL2B,MLC1,MAPK8IP2,PLXNB2,BRD1,FAM19A5,NCAPH2,MOV10L1,MIOX,PANX2,ALG12,CRELD2,ADM2,TRABD,SELO,HDAC10,SHANK3,TUBGCP6,LOC90834,LMF2,KLHDC7B,LOC284933,RPL23AP82,C22orf34,CHKB-CPT1B,IL17REL,FAM116B,PIM3,ODF3B,SYCE3,LOC100128946,LOC100144603,MIR3201,MIR4535 |
| 11p15.5 | 1.02E-62 | 1.02E-62 | chr11:1-709860 | DRD4,HRAS,IRF7,PSMD13,RNH1,SCT,RASSF7,IFITM1,IFITM3,DEAF1,IFITM2,PKP3,SIRT3,BET1L,CDHR5,PHRF1,SIGIRR,RIC8A,ATHL1,PTDSS2,ODF3,LRRC56,LOC143666,SCGB1C1,NLRP6,C11orf35,TMEM80,ANO9,B4GALNT4,IFITM5,MIR210,LOC653486,LOC100133161,MIR210HG |
| 4q34.3 | 3.63E-136 | 1.21E-55 | chr4:178911874-183060693 | LINC00290 |
| 3p14.2 | 6.98E-65 | 3.01E-55 | chr3:59034763-61547330 | FHIT |
| 16p13.3 | 9.88E-46 | 1.00E-45 | chr16:5144019-7771745 | RBFOX1 |
| 9p24.1 | 2.85E-40 | 3.24E-38 | chr9:8310705-12693402 | PTPRD |
| 18q23 | 1.92E-43 | 1.69E-37 | chr18:74979706-78077248 | NFATC1,CTDP1,TXNL4A,ADNP2,KCNG2,SALL3,RBFA,PQLC1,PARD6G,ATP9B,HSBP1L1,LOC100130522 |
| 4q35.2 | 2.65E-117 | 6.81E-36 | chr4:187475875-188227950 | FAT1 |
| 13q12.11 | 1.59E-50 | 2.57E-31 | chr13:1-20535070 | TUBA3C,ZMYM5,MPHOSPH8,PSPC1,TPTE2,PHF2P1,ANKRD20A9P,LINC00442,ANKRD26P3,LINC00421 |
| 15q15.1 | 7.94E-54 | 2.71E-29 | chr15:41795901-42068054 | TYRO3,MGA,RPAP1,MIR626 |
| 11q25 | 2.77E-40 | 4.93E-26 | chr11:133400280-135006516 | IGSF9B,NCAPD3,ACAD8,B3GAT1,THYN1,JAM3,GLB1L2,VPS26B,GLB1L3,SPATA19,LOC283174,LOC283177,LOC100128239,MIR4697 |
| 1p13.2 | 1.04E-28 | 1.69E-25 | chr1:110048528-117687124 | ADORA3,ALX3,AMPD1,AMPD2,RHOC,ATP1A1,ATP5F1,CAPZA1,CASQ2,CD2,CD53,CD58,CHI3L2,CSF1,GNAI3,GNAT2,GSTM1,GSTM2,GSTM3,GSTM4,GSTM5,IGSF3,KCNA2,KCNA3,KCNA10,KCNC4,KCND3,MOV10,NGF,NHLH2,NRAS,OVGP1,PTGFRN,RAP1A,SLC16A1,SYCP1,TSHB,WNT2B,CSDE1,TTF2,SLC16A4,CD101,LRIG2,TSPAN2,BCAS2,CEPT1,HBXIP,AP4B1,PHTF1,AHCYL1,DDX20,PTPN22,CHIA,TRIM33,RSBN1,ST7L,SLC22A15,LRIF1,CTTNBP2NL,FAM212B,OLFML3,AMIGO1,RBM15,DCLRE1B,WDR77,EPS8L3,DENND2D,SIKE1,TRIM45,VANGL1,GPR61,PROK1,ATP1A1OS,FAM40A,MAB21L3,DRAM2,C1orf88,C1orf162,SYT6,RP11-165H20.1,DENND2C,UBL4B,HIPK1,AKR7A2P1,MAGI3,FAM19A3,PPM1J,SLC6A17,MIR197,LOC440600,BCL2L15,PGCP1,CYMP,LOC643441,MIR942,LOC100129269,LOC100287722,MIR320B1,MIR4256,LOC100506343 |
| 17q11.2 | 1.40E-27 | 6.59E-23 | chr17:29326736-29722618 | EVI2A,EVI2B,NF1,OMG,MIR4733 |
| 20p12.1 | 9.00E-19 | 9.00E-19 | chr20:14302876-16036135 | FLRT3,MACROD2,MACROD2-AS1 |
| 7p22.3 | 1.04E-17 | 1.04E-17 | chr7:1-1496620 | GPER,PDGFA,PRKAR1B,ADAP1,SUN1,GET4,CYP2W1,HEATR2,FAM20C,C7orf50,ZFAND2A,COX19,GPR146,UNCX,FLJ44511,LOC442497,MIR339,LOC100288524 |
| 6p25.3 | 3.01E-17 | 3.01E-17 | chr6:1608837-2252425 | FOXC1,GMDS |
| 21q11.2 | 2.34E-14 | 2.34E-14 | chr21:1-15482604 | hsa-mir-3118-5,BAGE,TPTE,C21orf15,BAGE4,BAGE3,BAGE2,ANKRD30BP2,POTED,ANKRD20A11P,TEKT4P2,MIR3156-3,MIR3687,MIR3648 |
| 9p13.1 | 1.76E-16 | 9.75E-14 | chr9:38619152-71152237 | hsa-mir-1299,PGM5,ZNF658,FAM75A7,CNTNAP3,ANKRD20A1,FAM201A,CBWD5,LOC286297,FOXD4L3,AQP7P1,KGFLP1,FAM75A6,MGC21881,FAM74A1,FAM74A4,ZNF658B,LOC440896,ANKRD20A3,ANKRD20A2,AQP7P3,LOC442421,CBWD3,FAM27A,LOC572558,PGM5P2,LOC642236,FAM75A2,FAM75A4,LOC642929,LOC643648,CBWD6,FAM75A1,FOXD4L6,FOXD4L5,LOC653501,KGFLP2,FAM75A3,FAM75A5,FAM74A3,CNTNAP3B,ANKRD20A4,FOXD4L2,LOC100132352,FAM27C,FAM95B1,FAM27B,LOC100133920 |
| 19q13.43 | 1.06E-24 | 3.77E-13 | chr19:58661582-59128983 | A1BG,RPS5,ZNF8,MZF1,ZNF132,UBE2M,TRIM28,ZNF274,SLC27A5,ZNF324,CHMP2A,ZNF544,ZNF446,MGC2752,ZBTB45,ZNF837,ZNF497,ZNF584,ZSCAN22,ZNF324B,A1BG-AS1,LOC646862,LOC100131691,MIR4754 |
| 5q15 | 3.32E-37 | 8.15E-13 | chr5:73236070-114508587 | hsa-mir-548f-3,hsa-mir-548p,APC,ARSB,BHMT,CAMK4,CAST,CCNH,CETN3,CHD1,CKMT2,COX7C,CRHBP,HAPLN1,VCAN,DHFR,EFNA5,F2R,F2RL1,F2RL2,FER,GLRX,HEXB,HMGCR,KCNN2,LNPEP,MAN2A1,MCC,MEF2C,MSH3,PAM,PCSK1,RASA1,RASGRF2,RPS23,SRP19,TBCA,NR2F1,THBS4,XRCC4,ST8SIA4,REEP5,ENC1,AP3B1,PDE8B,NREP,RAB9BP1,HOMER1,SCAMP1,TTC37,ZFYVE16,PJA2,EDIL3,COL4A3BP,LHFPL2,NSA2,POLR3G,IQGAP2,RHOBTB3,ELL2,SV2C,PPIP5K2,OTP,SSBP2,BHMT2,FAM169A,RNU5E-1,RNU5D-1,DMGDH,GCNT4,POLK,ERAP1,FLJ11235,GIN1,AGGF1,WDR41,RIOK2,ARRDC3,EPB41L4A,ERAP2,FBXL17,YTHDC2,MCTP1,NUDT12,ATG10,SPATA9,TSSK1B,FAM172A,GPR98,ZCCHC9,ANKRD32,ZBED3,GFM2,SPZ1,TSLP,C5orf30,SLC25A46,ATP6AP1L,EPB41L4A-AS1,LYSMD3,SLCO6A1,JMY,POU5F2,POC5,STARD4,WDR36,ACOT12,TMEM167A,MBLAC2,TMEM161B,ARSK,FAM81B,PAPD4,DCP2,LIX1,FAM151B,S100Z,C5orf27,CMYA5,ANKRD31,SERINC5,KIAA0825,GPR150,NBPF22P,RGMB,RFESD,ANKRD34B,FAM174A,MTX3,SLCO4C1,MIR9-2,CRSP8P,FLJ42709,FLJ35946,TMEM232,LOC644936,LINC00461,SNORA13,SCARNA18,SNORA47,MIR583,LOC728723,LOC100129716,LOC100131067,LOC100133050,LOC100289230,LOC100289673,NCRUPAR,MIR2277,MIR4280,MTRNR2L2,MIR3607,MIR3660,LOC100505678,LOC100505894,MIR3977 |
| 7q36.1 | 5.74E-13 | 9.26E-13 | chr7:151817415-152136074 | MLL3 |
| 19q13.32 | 1.12E-23 | 2.38E-12 | chr19:47332686-47763284 | AP2S1,ARHGAP35,NPAS1,SAE1,ZC3H4,BBC3,TMEM160,SNAR-E,MIR3191,MIR3190 |
| 15q12 | 6.05E-52 | 3.40E-11 | chr15:1-32929863 | hsa-mir-1268,hsa-mir-3118-6,hsa-mir-3118-4,APBA2,NBEAP1,CHRNA7,GABRA5,GABRB3,GABRG3,IPW,TRPM1,NDN,OCA2,SNRPN,TJP1,UBE3A,MKRN3,PAR5,HERC2,SNURF,ARHGAP11A,FAN1,CYFIP1,FAM189A1,C15orf2,DKFZP434L187,KLF13,MAGEL2,MTMR10,NDNL2,ATP10A,NIPA2,CHRFAM7A,ULK4P3,ULK4P1,ARHGAP11B,SNORD107,TUBGCP5,NIPA1,PAR1,OTUD7A,LOC283683,OR4N4,LOC283710,HERC2P3,GOLGA6L1,GOLGA8G,GOLGA8IP,SNORD108,SNORD109B,SNORD115-1,WHAMMP3,POTEB,SNORD64,PAR4,PAR-SN,LOC348120,GOLGA8E,OR4M2,OR4N3P,HERC2P2,MIR211,NF1P2,HERC2P9,WHAMMP2,LOC503519,CHEK2P2,LOC646214,CXADRP2,LOC646278,REREP3,LOC653061,LOC653075,SNORD116-19,GOLGA6L6,LOC727924,GOLGA8C,PWRN1,PWRN2,SNORD116-1,SNORD116-2,SNORD116-3,SNORD116-4,SNORD116-5,SNORD116-8,SNORD116-10,SNORD116-11,SNORD116-12,SNORD116-13,SNORD116-14,SNORD116-15,SNORD116-16,SNORD116-18,SNORD116-20,SNORD116-21,SNORD116-22,SNORD116-23,SNORD116-24,SNORD116-25,SNORD115-2,SNORD116-26,SNORD116-27,SNORD115-3,SNORD115-4,SNORD115-5,SNORD115-6,SNORD115-7,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-13,SNORD115-14,SNORD115-15,SNORD115-16,SNORD115-17,SNORD115-18,SNORD115-20,SNORD115-22,SNORD115-23,SNORD115-25,SNORD115-26,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,SNORD115-33,SNORD115-34,SNORD115-35,SNORD115-36,SNORD115-37,SNORD115-38,SNORD115-39,SNORD115-40,SNORD115-41,SNORD115-44,SNORD116-28,SNORD116-29,SNORD115-48,SNORD115-24,SNORD115-27,SNORD115-28,SNORD115-45,SNORD115-47,LOC100128714,HERC2P7,GOLGA8F,GOLGA8DP,LOC100288615,LOC100288637,LOC100289656,MIR4509-1,MIR4509-2,MIR4508,MIR4715 |
| 12q24.33 | 1.40E-14 | 1.24E-10 | chr12:131692956-133851895 | GOLGA3,MMP17,POLE,PXMP2,SFSWAP,ZNF10,ZNF26,ZNF84,ZNF140,ULK1,ZNF268,P2RX2,ANKLE2,GALNT9,CHFR,EP400,FBRSL1,NOC4L,PUS1,PGAM5,DDX51,EP400NL,LOC647589,SNORA49,LOC100130238,ZNF605,LOC100507055 |
| 10q26.3 | 7.21E-15 | 2.09E-10 | chr10:135190263-135534747 | CYP2E1,DUX4,DUX2,MTG1,SYCE1,PAOX,SPRNP1,FRG2B,SPRN,LOC619207,DUX4L7,DUX4L6,DUX4L5,DUX4L2 |
| 6q21 | 4.61E-10 | 4.56E-10 | chr6:86319089-117076132 | hsa-mir-587,hsa-mir-2113,AIM1,AMD1,PRDM1,CCNC,CGA,CNR1,COL10A1,EPHA7,FOXO3,FRK,FYN,GABRR1,GABRR2,GPR6,GRIK2,HDAC2,HTR1E,KPNA5,LAMA4,MARCKS,POU3F2,PREP,REV3L,SIM1,SMPD2,MAP3K7,NR2E1,TSPYL1,DDO,SNX3,RNGTT,CD164,WISP3,WASF1,FHL5,ATG5,ZBTB24,FIG4,CASP8AP2,SYNCRIP,SLC35A1,FUT9,TRAF3IP2,PNRC1,ASCC3,BVES,SEC63,ANKRD6,ZNF292,CDK19,MDN1,TSPYL4,UFL1,ORC3,PNISR,FBXL4,SNORD50A,SESN1,OSTM1,NDUFAF4,DSE,TUBE1,C6orf203,CDC40,RWDD1,UBE2J1,COQ3,SOBP,AKIRIN2,QRSL1,AKIRIN2-AS1,RARS2,PDSS2,C6orf162,LYRM2,HACE1,BEND3,RRAGD,PRDM13,BACH2,C6orf164,POPDC3,MICAL1,MANEA,GPR63,SPACA1,ARMC2,RPF2,MCHR2,FAXC,GJA10,RTN4IP1,USP45,SLC22A16,KIAA1919,GTF3C6,KLHL32,SLC16A10,PM20D2,SRSF12,C6orf165,BVES-AS1,C6orf163,CCDC162P,AKD1,NT5DC1,FAM26D,ZUFSP,HS3ST5,LACE1,MMS22L,FAM26E,SCML4,CEP57L1,PPIL6,LOC285758,FLJ34503,RSPH4A,GJB7,SNHG5,LINC00222,LIN28B,FAM26F,GSTM2P1,RFPL4B,C6orf225,TSG1,TRAF3IP2-AS1,SNORD50B,LOC728012,TPI1P3,C6orf186,BET3L,LOC100130890,MIR2113,MIR548H3,LOC100422737,MIR4464,MIR4643 |
| 8p21.2 | 1.01E-09 | 1.78E-09 | chr8:25896447-26250295 | PPP2R2A |
| 2q34 | 1.16E-36 | 3.24E-09 | chr2:211542637-214143899 | ERBB4,IKZF2,MIR548F2,MIR4776-1 |
| 3p26.3 | 6.44E-09 | 6.44E-09 | chr3:1-3100786 | CHL1,CNTN6,CNTN4 |
| 3p12.2 | 1.29E-21 | 1.22E-07 | chr3:75363575-86988125 | GBE1,ROBO1,ROBO2,CADM2,LOC401074,LOC440970,FLJ20518,FAM86DP,ZNF717,FRG2C,MIR1324,MIR4273 |
| 14q24.1 | 1.86E-08 | 1.38E-07 | chr14:68275375-69288431 | ZFP36L1,RAD51B |
| 11q23.1 | 6.09E-21 | 5.31E-07 | chr11:105849158-117024891 | ACAT1,APOA1,APOA4,APOC3,ATM,CRYAB,DDX10,DLAT,DRD2,FDX1,GUCY1A2,HSPB2,HTR3A,IL18,NCAM1,NNMT,NPAT,POU2AF1,PPP2R1B,PTS,RDX,SDHD,SLN,ZBTB16,CUL5,ZNF259,HTR3B,ZW10,RBM7,EXPH5,SIK2,SIK3,CADM1,REXO2,TIMM8B,C11orf71,SLC35F2,RAB39A,BTG4,FAM55D,TTC12,C11orf57,ELMOD1,TEX12,ARHGAP20,USP28,AASDHPPT,C11orf1,ALG9,TMPRSS5,BCO2,KIAA1826,BUD13,DIXDC1,ZC3H12C,ALKBH8,FDXACB1,C11orf52,APOA5,C11orf93,PIH1D2,FAM55A,FAM55B,KBTBD3,CWF19L2,KDELC2,LAYN,C11orf65,ANKK1,LOC283143,C11orf53,C11orf34,C11orf87,C11orf92,C11orf88,MIR34B,MIR34C,LOC643923,CLDN25,LOC100132078,LOC100288346,MIR4301,HSPB2-C11orf52,MIR4491 |
| 7q31.1 | 4.03E-07 | 5.74E-07 | chr7:109599468-111366370 | LRRN3,IMMP2L |
| 1p31.1 | 1.92E-10 | 7.25E-07 | chr1:71699756-74522473 | NEGR1,NEGR1-IT1 |
| 17q21.31 | 4.31E-11 | 7.25E-07 | chr17:41178765-41336147 | BRCA1,NBR2 |
| 9q34.3 | 8.73E-06 | 8.73E-06 | chr9:135441810-139646221 | ABO,CEL,CELP,COL5A1,DBH,SARDH,FCN1,FCN2,LCN1,NOTCH1,PAEP,RALGDS,RPL7A,RXRA,SNAPC4,SURF1,SURF2,SURF4,MED22,SURF6,TSC1,VAV2,BRD3,LHX3,GFI1B,GTF3C5,GTF3C4,ADAMTSL2,PPP1R26,SEC16A,UBAC1,OLFM1,AGPAT2,SDCCAG3,WDR5,C9orf9,ADAMTS13,C9orf7,SLC2A6,PMPCA,GPSM1,DKFZP434A062,GBGT1,SNORD36C,SNORD36B,SNORD36A,SNORD24,OBP2B,OBP2A,MRPS2,EGFL7,INPP5E,BARHL1,REXO4,KCNT1,CARD9,DDX31,SNHG7,C9orf69,NACC2,C9orf116,FAM69B,CAMSAP1,C9orf163,LCN6,AK8,C9orf96,QSOX2,LINC00094,GLT6D1,TMEM8C,LCN9,LOC401557,SOHLH1,MIR126,LCN10,FAM163B,SNORA17,SNORA43,DNLZ,LOC100128593,LOC100130954,RNU6ATAC,MIR3689A,MIR3689B,LOC100506599,MIR3689D1,MIR3689F,MIR4669,MIR4673,MIR4674,MIR3689C,MIR3689D2,MIR3689E |
| 12q23.1 | 5.27E-08 | 8.73E-06 | chr12:99124001-100431272 | ANKS1B,FAM71C |
| Xp21.2 | 5.11E-05 | 5.15E-05 | chrX:30865118-34644819 | hsa-mir-548f-5,DMD,FTHL17,FAM47A |
| 10p15.3 | 7.17E-05 | 7.12E-05 | chr10:1-857150 | ZMYND11,DIP2C,TUBB8,C10orf108 |
| 10q11.23 | 6.80E-05 | 9.79E-05 | chr10:52644085-54061437 | PRKG1,CSTF2T,MIR605 |
| 17q25.3 | 0.00019483 | 0.00019271 | chr17:80443432-80574531 | FOXK2 |
| 1p33 | 1.07E-07 | 0.000219 | chr1:48935280-50514967 | BEND5,AGBL4 |
| 12p13.1 | 0.00036433 | 0.00035777 | chr12:12710990-12966966 | CDKN1B,CREBL2,GPR19,APOLD1,MIR61 |
| 14q32.33 | 9.45E-05 | 0.00074358 | chr14:94381429-107349540 | hsa-mir-544,hsa-mir-370,hsa-mir-342,SERPINA3,AKT1,BDKRB1,BDKRB2,SERPINA6,CKB,CRIP1,CRIP2,DIO3,DYNC1H1,EIF5,ELK2AP,EML1,BRF1,HSP90AA1,IFI27,JAG2,KLC1,MARK3,SERPINA5,SERPINA1,SERPINA4,PPP2R5C,MOK,TNFAIP2,TRAF3,VRK1,WARS,XRCC3,YY1,TCL1A,ADAM6,DLK1,CCNK,MTA1,BAG5,C14orf2,CDC42BPB,TCL1B,KIAA0125,TECPR2,SIVA1,CYP46A1,PAPOLA,RCOR1,PACS2,PPP1R13B,DICER1,KIF26A,TCL6,GPR132,SERPINA10,GLRX5,EVL,C14orf129,CINP,ASB2,CDCA4,ATG2B,MEG3,ZNF839,C14orf132,DDX24,BEGAIN,PPP4R4,DIO3OS,INF2,BCL11B,OTUB2,ZFYVE21,MEG8,WDR25,LINC00341,CLMN,TMEM121,AMN,IFI27L2,SETD3,APOPT1,HHIPL1,FAM181A,BTBD6,EXOC3L4,WDR20,AHNAK2,TRMT61A,TDRD9,ANKRD9,AK7,IFI27L1,C14orf79,PLD4,ADSSL1,SLC25A29,DEGS2,LINC00239,LOC145216,GSC,SERPINA12,C14orf49,MGC23270,NUDT14,LINC00521,SERPINA11,SNHG10,C14orf177,SLC25A47,LINC00523,KIAA0284,C14orf80,CCDC85C,SERPINA9,LINC00226,LINC00221,ASPG,SERPINA13,C14orf64,RTL1,TMEM179,DICER1-AS1,C14orf180,MIR127,MIR134,MIR136,MIR154,MIR203,MIR299,MIR323A,MIR337,MIR345,MIR376C,MIR369,MIR376A1,MIR377,MIR379,MIR380,MIR381,MIR382,MIR433,MIR431,MIR329-1,MIR329-2,MIR323B,MIR409,MIR412,MIR410,MIR376B,MIR485,MIR493,MIR432,MIR494,MIR495,MIR496,MIR487A,TEX22,MIR539,MIR376A2,MIR487B,SCARNA13,SNORA28,MIR411,MIR654,MIR655,MIR656,SNORD113-1,SNORD113-2,SNORD113-4,SNORD113-5,SNORD113-6,SNORD113-7,SNORD113-9,SNORD114-1,SNORD114-2,SNORD114-3,SNORD114-4,SNORD114-5,SNORD114-6,SNORD114-7,SNORD114-8,SNORD114-9,SNORD114-10,SNORD114-11,SNORD114-12,SNORD114-13,SNORD114-14,SNORD114-15,SNORD114-16,SNORD114-17,SNORD114-18,SNORD114-19,SNORD114-20,SNORD114-21,SNORD114-22,SNORD114-23,SNORD114-24,SNORD114-25,SNORD114-26,SNORD114-27,SNORD114-28,SNORD114-29,SNORD114-30,SNORD114-31,MIR758,MIR668,MIR770,MIR300,MIR541,MIR665,MIR543,MIR889,ZBTB42,LOC100129345,LOC100131366,MIR1247,MIR1185-1,MIR1185-2,MIR1197,MIR1193,MIR4309,MIR3173,LOC100507043,MIR3545,MIR4710,MIR2392 |
| 14q11.2 | 0.0010181 | 0.0010181 | chr14:1-30047530 | hsa-mir-3171,hsa-mir-1201,ANG,APEX1,BCL2L2,CEBPE,CMA1,LTB4R,CTSG,DAD1,FOXG1,GZMH,GZMB,HNRNPC,MMP14,MYH6,MYH7,NEDD8,NFATC4,NOVA1,PNP,NRL,OXA1L,PCK2,PSMB5,PSME1,PSME2,RABGGTA,RNASE1,RNASE2,RNASE3,RNASE4,RNASE6,SALL2,TEP1,TGM1,PABPN1,AP1G2,SLC7A7,CPNE6,TOX4,REC8,PARP2,DHRS2,EFS,IRF9,PRMT5,TM9SF1,EDDM3A,DHRS4,RIPK3,SUPT16H,ACIN1,KHNYN,SLC7A8,NGDN,LRP10,TINF2,OR10G3,OR10G2,OR4E2,CIDEB,CHMP4A,STXBP6,SLC39A2,FAM158A,ZNF219,GMPR2,SLC22A17,HAUS4,C14orf119,RNF31,RBM23,C14orf167,OSGEP,ARHGEF40,METTL3,LTB4R2,SDR39U1,RPGRIP1,NDRG2,NYNRIN,HOMEZ,CHD8,CCNB1IP1,C14orf93,ABHD4,EDDM3B,CDH24,METTL17,IL25,THTPA,OR4K5,OR11H2,OR4K1,IPO4,DCAF11,OR4K15,JPH4,RNASE7,RAB2B,AJUBA,ZFHX2,RPPH1,LRRC16B,PPP1R3E,TMEM55B,TTC5,DHRS1,CMTM5,RNASE11,TPPP2,RNASE8,MRPL52,PSMB11,OR4K14,OR4L1,OR11H6,KLHL33,MDP1,FITM1,REM2,C14orf21,ADCY4,LOC283624,TSSK4,DHRS4L2,SNORD8,RNASE10,OR6S1,C14orf23,OR4N2,OR4K2,OR4K13,OR4K17,OR4N5,OR11G2,OR11H4,RNASE9,OR5AU1,POTEG,MIR208A,C14orf165,OR11H12,RNASE13,OR4Q3,OR4M1,RNASE12,POTEM,LOC642426,ECRP,C14orf176,CBLN3,SNORD9,DHRS4L1,SNORD126,MIR208B,MIR4307,LOC100505967,NEDD8-MDP1,BCL2L2-PABPN1,MIR4707 |
| 2p25.3 | 0.0011137 | 0.0011137 | chr2:1-20072169 | hsa-mir-548s,ACP1,DDX1,E2F6,HPCAL1,ID2,KCNF1,KCNS3,MYCN,ODC1,RPS7,RRM2,SOX11,ADAM17,TPO,TSSC1,VSNL1,PXDN,KLF11,ASAP2,TAF1B,ITGB1BP1,ROCK2,GREB1,RNF144A,PDIA6,MYCNOS,YWHAQ,MYT1L,LPIN1,NTSR2,SH3YL1,TRIB2,GRHL1,TRAPPC12,NBAS,CPSF3,SNTG2,ADI1,ALLC,KIDINS220,RDH14,COLEC11,SMC6,NOL10,FAM49A,RSAD2,NT5C1B,CMPK2,MBOAT2,TMEM18,OSR1,C2orf50,PQLC3,LOC150622,FAM84A,CYS1,ATP6V1C2,RNASEH1,FAM150B,IAH1,FLJ33534,LOC339788,LINC00299,LOC339822,MSGN1,GEN1,C2orf48,LOC386597,LOC400940,LINC00487,FAM110C,LOC727982,RAD51AP2,LOC730811,SNORA80B,MIR4261,MIR3125,MIR4262,LOC100505964,LOC100506054,LOC100506274,LOC100506474,NT5C1B-RDH14,MIR4757,MIR4429 |
| 5q35.3 | 0.0028515 | 0.0028515 | chr5:153840473-180915260 | hsa-mir-1271,hsa-mir-1303,ADRA1B,BNIP1,CANX,CCNG1,CLTB,NKX2-5,DBN1,DOCK2,DRD1,DUSP1,EBF1,F12,FABP6,FGFR4,FOXI1,FLT4,GABRA1,GABRA6,GABRB2,GABRG2,GABRP,GRK6,GRM6,HK3,HMMR,HNRNPAB,HNRNPH1,HRH2,IL12B,ITK,KCNMB1,LCP2,LTC4S,MGAT1,MSX2,NPM1,MAPK9,PROP1,RARS,SGCD,SLC34A1,SLIT3,SNCB,STK10,ZNF354A,TTC1,STC2,ADAM19,FGF18,SQSTM1,ATP6V0E1,PTTG1,PDLIM7,CNOT8,HAND1,MED7,ADAMTS2,CLINT1,MAML1,GFPT2,GNB2L1,SLU7,RGS14,CPLX2,C5orf4,BTNL3,LMAN2,SOX30,MGAT4B,B4GALT7,RNF44,TBC1D9B,ATP10B,N4BP3,FAF2,WWC1,FBXW11,LARP1,ZNF346,GEMIN5,TSPAN17,OR4F3,HAVCR1,CYFIP2,PRELID1,MAT2B,MRPL22,TLX3,KCNIP1,ZNF354C,RPL26L1,C5orf45,DDX41,NOP16,HMP19,UIMC1,RAB24,NEURL1B,FAM193B,TMED9,CDHR2,CCDC99,THG1L,NHP2,RNF130,KIAA1191,ERGIC1,CLK4,ODZ2,CNOT6,C5orf54,NSD1,GMCL1P1,RMND5B,RANBP17,CCNJL,PANK3,BTNL8,DOK3,ZFP2,RUFY1,CPEB4,PRR7,TRIM7,MXD3,THOC3,TRIM52,HAVCR2,AGXT2L2,UNC5A,TRIM41,BOD1,COL23A1,TIMD4,UBTD2,SCGB3A1,SFXN1,GPRIN1,PWWP2A,C1QTNF2,ZNF354B,C5orf47,C5orf58,OR2Y1,LSM11,NUDCD2,UBLCP1,C5orf41,BTNL9,PPP1R2P3,FAM71B,RNF145,HIGD2A,FAM153B,LOC202181,EIF4E1B,RASGEF1C,LOC257358,EFCAB9,SH3PXD2B,LOC285593,FAM153A,ARL10,LOC285626,LOC285627,LOC285629,KIF4B,OR2V2,ZNF454,C5orf60,LOC340037,PFN3,ZNF879,FBLL1,NIPAL4,C5orf25,MIR103A1,MIR146A,MIR218-2,FNDC9,FLJ16171,MIR340,SNORD95,SNORD96A,LOC643201,ZFP62,CBY3,FAM153C,SNORA74B,MIR585,LOC728554,AACSP1,LOC729678,OR4F29,FAM196B,LOC100132062,LOC100132287,C5orf52,LOC100268168,MIR1229,MIR103B1,MIR3142,MIR3141,MIR4281,MIR3912,LOC100507387,MIR4634,MIR4638,MIR378E,LOC100859930 |
| 21q22.3 | 0.012351 | 0.012227 | chr21:46230687-46306160 | PTTG1IP |
| 22q11.1 | 0.020332 | 0.020332 | chr22:1-17960585 | IL17RA,ANKRD62P1-PARP4P3,POTEH,HSFY1P1,CECR6,CECR5,CECR3,CECR1,OR11H1,GAB4,CCT8L2,XKR3,TPTEP1,CECR7,CECR5-AS1 |
| 18q21.2 | 6.39E-06 | 0.036866 | chr18:48472083-48920689 | SMAD4,MEX3C,ELAC1 |
| 17p13.3 | 0.040633 | 0.040814 | chr17:1-1180022 | ABR,DOC2B,RPH3AL,TIMM22,GEMIN4,GLOD4,RNMTL1,VPS53,NXN,FAM57A,FAM101B,C17orf97,BHLHA9,DBIL5P,MIR3183,LOC100506388 |
| 4p16.3 | 0.056345 | 0.056345 | chr4:1-1243876 | hsa-mir-571,ATP5I,CTBP1,DGKQ,GAK,IDUA,MYL5,PDE6B,ZNF141,PCGF3,SPON2,CPLX1,SLC26A1,FGFRL1,PIGG,ABCA11P,MFSD7,TMEM175,ZNF595,ZNF721,ZNF718,RNF212,ZNF876P,ZNF732,LOC100129917,LOC100130872,TMED11P |
| 9p21.2 | 4.44E-25 | 0.091742 | chr9:27572512-28982153 | LINGO2,MIR876,MIR873 |
| 10q25.1 | 7.54E-17 | 0.11879 | chr10:99340084-113910615 | hsa-mir-548e,hsa-mir-3158-2,ADD3,ADRA2A,ARL3,CHUK,ABCC2,COL17A1,COX15,CPN1,CYP17A1,DUSP5,FGF8,GOT1,TLX1,HPS1,MXI1,NDUFB8,NFKB2,PAX2,PITX3,PSD,SCD,SFRP5,FBXW4,TAF5,WNT8B,XPNPEP1,SHOC2,GBF1,LDB1,BTRC,PKD2L1,INA,SMC3,NEURL,NOLC1,GSTO1,SH3PXD2A,SLK,ACTR1A,SMNDC1,NPM3,ERLIN1,LBX1,MGEA5,NT5C2,PDCD11,SORCS3,PPRC1,DNMBP,DPCD,SEC31B,CNNM1,PDCD4,C10orf28,POLL,KCNIP2,CALHM2,CUTC,SUFU,CNNM2,C10orf26,CRTAC1,CWF19L1,PI4K2A,HIF1AN,FAM178A,C10orf2,ENTPD7,AS3MT,SEMA4G,AVPI1,HPSE2,CUEDC2,FBXL15,C10orf76,HPS6,TMEM180,C10orf95,PDZD7,OBFC1,WDR96,TRIM8,KAZALD1,SFXN3,SLC25A28,ELOVL3,MARVELD1,PCGF6,LOXL4,LZTS2,MRPL43,PYROXD2,USMG5,ITPRIP,LINC00263,BBIP1,HOGA1,SORCS1,MORN4,ZFYVE27,SFXN2,C10orf32,GSTO2,SFR1,CALHM3,NKX2-3,CCDC147,CALHM1,BLOC1S2,RBM20,LOC282997,FLJ41350,GOLGA7B,C10orf62,MIR146B,RPL13AP6,SNORA12,MIR608,MIR609,LOC729020,TLX1NB,MIR936,DNMBP-AS1,LOC100289509,MIR1287,MIR1307,MIR3158-1,MIR3158-2,LOC100505761,LOC100505839,LOC100505933,C10orf32-AS3MT,MIR4680,MIR4482-1,MIR4685 |
| 1q44 | 0.15417 | 0.15417 | chr1:245282267-247110824 | AHCTF1,SCCPDH,KIF26B,TFB2M,SMYD3,LOC149134,CNST,LOC255654 |
| 8p11.21 | 0.1289 | 0.17382 | chr8:42883855-47753079 | FNTA,SGK196,HGSNAT,POTEA |
| Xp22.33 | 0.21375 | 0.21462 | chrX:1-11137490 | SLC25A6,SHROOM2,STS,ARSD,ARSE,ARSF,ASMT,CLCN4,CSF2RA,IL3RA,KAL1,CD99,MID1,GPR143,PRKX,SHOX,TBL1X,XG,GTPBP6,HDHD1,AKAP17A,PNPLA4,ASMTL,GYG2,ZBED1,MXRA5,VCX,PPP2R3B,VCX2,VCX3A,PLCXD1,WWC3,NLGN4X,CRLF2,ASMTL-AS1,FAM9A,FAM9B,DHRSX,PPP2R3B-AS1,P2RY8,ARSH,LOC389906,CD99P1,VCX3B,MIR651,CXorf28,XGPY2,LOC100288814,LINC00102,MIR3690,MIR4770,MIR4767 |