Overview

I will try to compare cutoff values within 3 methods of certain algorithm

Setting:

row<-40, col<-100, num<-10, str<-0.3, times<-100

Result

reg
  • topn, type one error, permutation
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   0.209   0.296   0.355   0.348   0.389   0.529
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   0.177   0.233   0.265   0.276   0.308   0.409
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   0.185   0.245   0.276   0.275   0.305   0.387
smo
  • topn, type one error, permutation
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   0.164   0.238   0.264   0.262   0.287   0.357
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0398  0.1130  0.1370  0.1410  0.1620  0.2530
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   0.169   0.261   0.307   0.307   0.342   0.458

Result interpretation

The mean and median for each algorithm are same.