Cutoff comparison

Overview

I will try to compare cutoff values within 3 methods of certain algorithm

Setting:

row<-40, col<-100, num<-5, str<-0, times<-100

Result

reg

• topn, type one error, permutation

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0685  0.1010  0.1130  0.1120  0.1260  0.1560

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0675  0.0974  0.1110  0.1110  0.1250  0.1630

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0648  0.0952  0.1100  0.1090  0.1220  0.1540

smo

• topn, type one error, permutation

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0525  0.0751  0.0852  0.0869  0.0936  0.1420

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0324  0.0697  0.0836  0.0849  0.0983  0.1310

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0393  0.0693  0.0826  0.0830  0.0945  0.1500

Result interpretation

The mean and median for each algorithm are same.