u <- "http://rs-data1-mel.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3S-3d/ngt/1992/19921231152000-ABOM-L3S_GHRSST-SSTskin-AVHRR_D-3d_night-v02.0-fv02.0.nc"
library(raster)
## Loading required package: sp
sst <- raster(u)
## Loading required namespace: ncdf4
## Warning in .varName(nc, varname, warn = warn): varname used is: sea_surface_temperature
## If that is not correct, you can set it to one of: sea_surface_temperature, sea_surface_temperature_day_night, sst_dtime, dt_analysis, wind_speed, wind_speed_dtime_from_sst, sea_ice_fraction, sea_ice_fraction_dtime_from_sst, satellite_zenith_angle, l2p_flags, quality_level, sses_bias, sses_standard_deviation, sses_count, sst_count, sst_mean, sst_standard_deviation
sst <- readAll(sst)
minmax <- range(values(sst), na.rm = TRUE)
library(palr)
pal <- sstPal(64)
plot(sst, col = pal, zlim = minmax, main = sprintf("sst (K) L3s %s", substr(basename(u), 1, 8)))
library(mapdata)
## Loading required package: maps
ex <- c(146, 151, -45, -42)
plot(crop(sst, ex), col = pal, zlim = minmax, main = sprintf("sst (K) L3s %s", substr(basename(u), 1, 8)))
maps::map("worldHires", region = "Australia", add = TRUE)
devtools::session_info()
## Session info -------------------------------------------------------------
## setting value
## version R version 3.4.1 (2017-06-30)
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate en_AU.UTF-8
## tz Australia/Hobart
## date 2017-08-19
## Packages -----------------------------------------------------------------
## package * version date
## backports 1.1.0 2017-05-22
## base * 3.4.1 2017-07-07
## compiler 3.4.1 2017-07-07
## datasets * 3.4.1 2017-07-07
## devtools 1.13.3 2017-08-02
## digest 0.6.12 2017-01-27
## evaluate 0.10.1 2017-06-24
## graphics * 3.4.1 2017-07-07
## grDevices * 3.4.1 2017-07-07
## grid 3.4.1 2017-07-07
## htmltools 0.3.6 2017-04-28
## knitr 1.16.5 2017-07-16
## lattice 0.20-35 2017-03-25
## magrittr 1.5 2014-11-22
## mapdata * 2.2-6 2016-01-14
## maps * 3.2.0 2017-06-08
## memoise 1.1.0 2017-04-21
## methods * 3.4.1 2017-07-07
## ncdf4 1.16 2017-04-01
## palr * 0.0.6 2017-04-28
## raster * 2.5-8 2016-06-02
## Rcpp 0.12.12 2017-07-15
## rmarkdown 1.6 2017-06-15
## rprojroot 1.2 2017-01-16
## sp * 1.2-5 2017-06-29
## stats * 3.4.1 2017-07-07
## stringi 1.1.5 2017-04-07
## stringr 1.2.0 2017-02-18
## tools 3.4.1 2017-07-07
## utils * 3.4.1 2017-07-07
## withr 2.0.0 2017-08-11
## source
## CRAN (R 3.4.0)
## local
## local
## local
## CRAN (R 3.4.1)
## CRAN (R 3.4.0)
## CRAN (R 3.4.0)
## local
## local
## local
## cran (@0.3.6)
## Github (yihui/knitr@546e059)
## CRAN (R 3.4.0)
## CRAN (R 3.4.0)
## CRAN (R 3.4.0)
## CRAN (R 3.4.0)
## cran (@1.1.0)
## local
## cran (@1.16)
## Github (AustralianAntarcticDivision/palr@d94e8c5)
## CRAN (R 3.4.0)
## cran (@0.12.12)
## CRAN (R 3.4.0)
## CRAN (R 3.4.0)
## CRAN (R 3.4.0)
## local
## cran (@1.1.5)
## CRAN (R 3.4.0)
## local
## local
## Github (jimhester/withr@190d293)