Dataの読み込み

Eze<-readRDS(file="EzeOba.rds")

Libraryの読み込み

library(tableone)

Single group summary

-解析対象となった。177人のSingle group summary

CreateTableOne(data= Eze)
## Warning in CreateTableOne(data = Eze): Dropping variable(s) Pre_Start  due to unsupported class.
##                             
##                              Overall               
##   n                                 177            
##   TID (mean (sd))            1697708.79 (695096.26)
##   ID (mean (sd))                 177.27 (108.62)   
##   Exclude (%)                                      
##      0                              153 (86.4)     
##      1                                0 ( 0.0)     
##      2                                7 ( 4.0)     
##      3                               17 ( 9.6)     
##      4                                0 ( 0.0)     
##   Pretreatment_statin (%)                          
##      0                              102 (59.0)     
##      1                               53 (30.6)     
##      2                                0 ( 0.0)     
##      3                               18 (10.4)     
##      5                                0 ( 0.0)     
##   Statin (%)                                       
##      Atrovastatin                    19 (21.8)     
##      Bezafibrate                      7 ( 8.0)     
##      Fenofibrate                     11 (12.6)     
##      Fluvastatin                      1 ( 1.1)     
##      Pitavastatin                    18 (20.7)     
##      Plavastatin                      7 ( 8.0)     
##      Rosuvastatin                    24 (27.6)     
##   Gender = Male (%)                  93 (52.5)     
##   Age_F (mean (sd))               57.98 (14.27)    
##   LDL_0 (mean (sd))              143.95 (32.50)    
##   LDLK_0 (mean (sd))             150.80 (51.69)    
##   TG_0 (mean (sd))               206.04 (159.92)   
##   LDL_90 (mean (sd))             117.16 (34.17)    
##   LDLK_90 (mean (sd))            116.99 (39.40)    
##   TG_90 (mean (sd))              189.20 (139.33)   
##   LDL_180 (mean (sd))            121.59 (43.09)    
##   LDLK_180 (mean (sd))           115.81 (35.88)    
##   LDL_365 (mean (sd))            120.27 (38.35)    
##   LDLK_365 (mean (sd))           117.75 (34.80)    
##   DM012 (%)                                        
##      0                              107 (64.8)     
##      1                               43 (26.1)     
##      2                               11 ( 6.7)     
##      3                                4 ( 2.4)     
##   HT = 1 (%)                         84 (50.9)     
##   CABG (%)                                         
##      0                              160 (96.4)     
##      1                                5 ( 3.0)     
##      9                                1 ( 0.6)     
##   CKD (%)                                          
##      0                                3 ( 2.1)     
##      1                               16 (11.2)     
##      2                               81 (56.6)     
##      3                                2 ( 1.4)     
##      3a                              15 (10.5)     
##      3b                              14 ( 9.8)     
##      3b                             2 ( 1.4)     
##      4                                2 ( 1.4)     
##      5                                2 ( 1.4)     
##      G3a                              5 ( 3.5)     
##      G4                               1 ( 0.7)     
##   OMI = 1 (%)                        14 ( 8.5)     
##   PCI = 1 (%)                        23 (13.9)     
##   DPC_DL = 1 (%)                     82 (46.3)     
##   DPC_AP = 1 (%)                     37 (20.9)     
##   DPC_DM = 1 (%)                     56 (31.6)     
##   DPC_HD = 1 (%)                     17 ( 9.6)     
##   DPC_HT = 1 (%)                     69 (39.0)     
##   LDLA0 (mean (sd))              152.17 (37.76)    
##   LDLA90 (mean (sd))             120.60 (34.54)    
##   LDLA180 (mean (sd))            118.84 (39.79)    
##   LDLA365 (mean (sd))            119.02 (36.51)    
##   CR90 (mean (sd))               -19.29 (18.46)    
##   CR180 (mean (sd))              -19.90 (23.41)    
##   CR365 (mean (sd))              -19.35 (23.25)    
##   Statin01 = 1 (%)                   69 (39.0)     
##   DM01 (mean (sd))                 0.34 (0.47)     
##   Age_F_category (mean (sd))       1.50 (0.50)

Detailed information including missing

##Vectors of varibles summarize
myvars<-c("Statin","Statin01","Gender","Age_F","LDL_0","LDLK_0","TG_0","LDL_90","LDLK_90","TG_90","LDLA90","DM01","HT","CABG","CKD","OMI","PCI","DPC_DL","DPC_AP","DPC_DM","DPC_HD","DPC_HT","CR90")

#Vector of categolical variables
cat<-c("Statin","Statin01","Gender","DM01","HT","CABG","CKD","OMI","PCI","DPC_DL","DPC_AP","DPC_DM","DPC_HD","DPC_HT")

#Create a TableOne object
tab<-CreateTableOne(vars= myvars, data=Eze, factorVars=cat)
summary(tab)
## 
##      ### Summary of continuous variables ###
## 
## strata: Overall
##           n miss p.miss mean  sd median p25 p75 min  max  skew  kurt
## Age_F   177    0      0   58  14     59  49  68  18   88 -0.31 -0.28
## LDL_0   177  100     56  144  32    150 124 165  52  218 -0.55  0.26
## LDLK_0  177   86     49  151  52    153 132 174 -31  304 -0.44  2.68
## TG_0    177    8      5  206 160    165 117 235  48 1361  3.72 19.86
## LDL_90  177  101     57  117  34    114 101 141  48  204  0.13  0.02
## LDLK_90 177   88     50  117  39    120  96 135  15  252  0.09  1.15
## TG_90   177   22     12  189 139    154 103 218  55 1023  2.78 10.16
## LDLA90  177   26     15  121  35    119 102 140  48  252  0.38  0.85
## CR90    177   28     16  -19  18    -19 -29 -10 -75   72  0.64  3.89
## 
## =======================================================================================
## 
##      ### Summary of categorical variables ### 
## 
## strata: Overall
##       var   n miss p.miss        level freq percent cum.percent
##    Statin 177   90   50.8 Atrovastatin   19    21.8        21.8
##                            Bezafibrate    7     8.0        29.9
##                            Fenofibrate   11    12.6        42.5
##                            Fluvastatin    1     1.1        43.7
##                           Pitavastatin   18    20.7        64.4
##                            Plavastatin    7     8.0        72.4
##                           Rosuvastatin   24    27.6       100.0
##                                                                
##  Statin01 177    0    0.0            0  108    61.0        61.0
##                                      1   69    39.0       100.0
##                                                                
##    Gender 177    0    0.0       Female   84    47.5        47.5
##                                   Male   93    52.5       100.0
##                                                                
##      DM01 177   16    9.0            0  107    66.5        66.5
##                                      1   54    33.5       100.0
##                                                                
##        HT 177   12    6.8            0   81    49.1        49.1
##                                      1   84    50.9       100.0
##                                                                
##      CABG 177   11    6.2            0  160    96.4        96.4
##                                      1    5     3.0        99.4
##                                      9    1     0.6       100.0
##                                                                
##       CKD 177   34   19.2            0    3     2.1         2.1
##                                      1   16    11.2        13.3
##                                      2   81    56.6        69.9
##                                      3    2     1.4        71.3
##                                     3a   15    10.5        81.8
##                                     3b   14     9.8        91.6
##                                   3b    2     1.4        93.0
##                                      4    2     1.4        94.4
##                                      5    2     1.4        95.8
##                                    G3a    5     3.5        99.3
##                                     G4    1     0.7       100.0
##                                                                
##       OMI 177   12    6.8            0  151    91.5        91.5
##                                      1   14     8.5       100.0
##                                                                
##       PCI 177   11    6.2            0  143    86.1        86.1
##                                      1   23    13.9       100.0
##                                                                
##    DPC_DL 177    0    0.0            0   95    53.7        53.7
##                                      1   82    46.3       100.0
##                                                                
##    DPC_AP 177    0    0.0            0  140    79.1        79.1
##                                      1   37    20.9       100.0
##                                                                
##    DPC_DM 177    0    0.0            0  121    68.4        68.4
##                                      1   56    31.6       100.0
##                                                                
##    DPC_HD 177    0    0.0            0  160    90.4        90.4
##                                      1   17     9.6       100.0
##                                                                
##    DPC_HT 177    0    0.0            0  108    61.0        61.0
##                                      1   69    39.0       100.0
##