library(spatstat)
## Warning: package 'spatstat' was built under R version 3.3.3
## Loading required package: nlme
## Warning: package 'nlme' was built under R version 3.3.3
## Loading required package: rpart
## Warning: package 'rpart' was built under R version 3.3.3
## 
## spatstat 1.51-0       (nickname: 'Poetic Licence') 
## For an introduction to spatstat, type 'beginner'
## 
## Note: R version 3.3.1 (2016-06-21) is more than 9 months old; we strongly recommend upgrading to the latest version
library(ggplot2)
## Warning: package 'ggplot2' was built under R version 3.3.3
library(rpart)
library(nlme)
load(file="anemone_sim.rda")
plot(density(anemone_sim))
points(anemone_sim,pch=20)

env <- envelope(anemone_sim, Kest, nsim = 100)
## Generating 100 simulations of CSR  ...
## 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
## 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,
## 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99,  100.
## 
## Done.
plot(env)

dfadf

load(file="clumped_sim.rda")
plot(density(clumped_sim))
points(clumped_sim,pch=20)

env2<-envelope(clumped_sim,Kest,nsim=100)
## Generating 100 simulations of CSR  ...
## 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
## 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,
## 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99,  100.
## 
## Done.
plot(env2)

dkjfa;ldkjf

load(file="uniform_sim.rda")
plot(density(uniform_sim))
points(uniform_sim,pch=20)

env3<-envelope(uniform_sim,Kest,nsim=100)
## Generating 100 simulations of CSR  ...
## 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
## 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,
## 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99,  100.
## 
## Done.
plot(env3) ##clumped at close distances and uniform at far distances!!!

sdafdsfa

load(file="uniform2_sim.rda")
plot(density(uniform2_sim))
points(uniform2_sim,pch=20)

env4<-envelope(uniform2_sim,Kest,nsim=100)
## Generating 100 simulations of CSR  ...
## 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
## 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,
## 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99,  100.
## 
## Done.
plot(env4)

library(spatstat)
library(rpart)
data(anemones)
plot(anemones)

plot(density(anemones))