source("/Users/mauriciogutierrez/Library/Mobile Documents/com~apple~CloudDocs/estadisticas/general_functions_new.R")
## Loading required package: XLConnectJars
## XLConnect 0.2-12 by Mirai Solutions GmbH [aut],
##   Martin Studer [cre],
##   The Apache Software Foundation [ctb, cph] (Apache POI, Apache Commons
##     Codec),
##   Stephen Colebourne [ctb, cph] (Joda-Time Java library),
##   Graph Builder [ctb, cph] (Curvesapi Java library)
## http://www.mirai-solutions.com ,
## http://miraisolutions.wordpress.com
## Loading required package: reshape2
## Loading required package: stringr
data <- readexcel("/Users/mauriciogutierrez/Library/Mobile Documents/com~apple~CloudDocs/estadisticas/bermudez/datos2.xls","Hoja1")

library(stringr)

labeldicotomico=c("no","yes")

# Datos sobre el total

means(data,data$edad)
## 
##                                           edad
## n                                           63
## Mean                                     51.76
## Median                                      52
## Sd                                       10.94
## Min                                         29
## Max                                         74
## Range                                       45
## Q1                                          43
## Q3                                          58
## Iqr                                         15
## Normality                                0.275
## ICI                                      49.01
## SCI                                      54.52
## Summary   Mean[ICI-ICS] --> 51.76(49.01-54.52)

data$imc=as.numeric(data$IMC)
## Warning: NAs introduced by coercion
means(data,data$imc)
## 
##                                            imc
## n                                           62
## Mean                                     32.37
## Median                                   31.68
## Sd                                        5.81
## Min                                      20.39
## Max                                      46.02
## Range                                    25.63
## Q1                                       28.32
## Q3                                       35.52
## Iqr                                        7.2
## Normality                                0.212
## ICI                                      30.89
## SCI                                      33.84
## Summary   Mean[ICI-ICS] --> 32.37(30.89-33.84)

means(data,data$imc,data$sexo)
## 
##                        sexo = F           sexo = M
## n                            25                 37
## Mean                      30.03              33.95
## Median                    29.37              33.49
## Sd                         5.47               5.56
## Min                       20.39              24.84
## Max                       45.23              46.02
## Range                     24.84              21.18
## Q1                        28.03              29.47
## Q3                        32.04              37.57
## Iqr                        4.01                8.1
## Normal                    0.197              0.354
## IIC                       27.77              32.09
## ICS                       32.28               35.8
## Summary2    30.03 (27.77-32.28) 33.95 (32.09-35.8)
## Summary           Mean[ICI-ICS]                   
## Groups            Homocedastics                   
## Normality                   Yes                   
## Differences                 Yes                   
## p-value                   0.008                   
## Method        t-Student(Pooled)

means(data,data$Cintura,data$sexo)
## 
##                         sexo = F               sexo = M
## n                             25                     38
## Mean                       97.32                 114.82
## Median                        98                    115
## Sd                         12.33                  13.69
## Min                           64                     90
## Max                          120                    145
## Range                         56                     55
## Q1                            92                    105
## Q3                           104                 123.75
## Iqr                           12                  18.75
## Normal                     0.767                  0.529
## IIC                        92.23                 110.31
## ICS                       102.41                 119.32
## Summary2    97.32 (92.23-102.41) 114.82 (110.31-119.32)
## Summary            Mean[ICI-ICS]                       
## Groups             Homocedastics                       
## Normality                    Yes                       
## Differences                  Yes                       
## p-value                   <0.001                       
## Method         t-Student(Pooled)

freq(data,data$sexo,using_na=T)

## 
##       absolute relative cumulative   ici   ics
## F           25    39.68      39.68 27.57  52.8
## M           38    60.32        100  47.2 72.43
## Total       63   100.00
freq(data,data$SM,using_na=T,labeldicotomico)

## 
##       absolute relative cumulative   ici   ics
## no           6     9.52       9.52  3.58 19.59
## yes         57    90.48        100 80.41 96.42
## Total       63   100.00
freq(data,data$HTA,using_na=T,labeldicotomico)

## 
##       absolute relative cumulative   ici   ics
## no          20    31.75      31.75 20.58 44.69
## yes         43    68.25        100 55.31 79.42
## Total       63   100.00
means(data,data$PAS)
## 
##                                      PAS
## n                                     63
## Mean                              125.71
## Median                               120
## Sd                                 16.29
## Min                                  100
## Max                                  170
## Range                                 70
## Q1                                   120
## Q3                                   130
## Iqr                                   10
## Normality                              0
## ICI                               121.61
## SCI                               129.82
## Summary   Median[Q1-Q3]  -->120(120-130)

means(data,data$PAD)
## 
##                                   PAD
## n                                  63
## Mean                            76.43
## Median                             80
## Sd                              11.16
## Min                                50
## Max                               100
## Range                              50
## Q1                                 70
## Q3                                 80
## Iqr                                10
## Normality                       0.003
## ICI                             73.62
## SCI                             79.24
## Summary   Median[Q1-Q3]  -->80(70-80)

means(data,data$PP)
## 
##                                    PP
## n                                  62
## Mean                            49.27
## Median                             50
## Sd                              11.05
## Min                                20
## Max                                80
## Range                              60
## Q1                                 40
## Q3                                 55
## Iqr                                15
## Normality                       0.002
## ICI                             46.47
## SCI                             52.08
## Summary   Median[Q1-Q3]  -->50(40-55)

means(data,data$PAS,data$SM,labeldicotomico)
## 
##                      SM = no      SM = yes
## n                          6            57
## Mean                  115.83        126.75
## Median                   120           125
## Sd                     11.14         16.46
## Min                      100           100
## Max                      130           170
## Range                     30            70
## Q1                    108.75           120
## Q3                       120           130
## Iqr                    11.25            10
## Normal                 0.316         0.001
## IIC                   104.14        122.39
## ICS                   127.53        131.12
## Summary2    120 (108.75-120) 125 (120-130)
## Summary        Median[Q1-Q3]              
## Groups         Homocedastics              
## Normality                 No              
## Differences               No              
## p-value                0.109              
## Method              Wilcoxon

means(data,data$PAD,data$SM,labeldicotomico)
## 
##                   SM = no   SM = yes
## n                       6         57
## Mean                74.17      76.67
## Median                 75         80
## Sd                   9.17      11.39
## Min                    60         50
## Max                    85        100
## Range                  25         50
## Q1                     70         70
## Q3                     80         80
## Iqr                    10         10
## Normal              0.566      0.005
## IIC                 64.54      73.64
## ICS                 83.79      79.69
## Summary2       75 (70-80) 80 (70-80)
## Summary     Median[Q1-Q3]           
## Groups      Homocedastics           
## Normality              No           
## Differences            No           
## p-value             0.654           
## Method           Wilcoxon

means(data,data$PP,data$SM,labeldicotomico)
## 
##                     SM = no   SM = yes
## n                         6         56
## Mean                  41.67      50.09
## Median                   40         50
## Sd                     6.83      11.14
## Min                      35         20
## Max                      50         80
## Range                    15         60
## Q1                    36.25         40
## Q3                     47.5         60
## Iqr                   11.25         20
## Normal                0.093      0.003
## IIC                    34.5      47.11
## ICS                   48.84      53.07
## Summary2    40 (36.25-47.5) 50 (40-60)
## Summary       Median[Q1-Q3]           
## Groups        Homocedastics           
## Normality                No           
## Differences             Yes           
## p-value               0.038           
## Method             Wilcoxon

freq(data,data$Glicemia,using_na=T,c("Normoglucemic","IFG","Diabetes"))

## 
##               absolute relative cumulative   ici   ics
## Normoglucemic       30    47.62      47.62 34.88 60.59
## IFG                 25    39.68       87.3 27.57  52.8
## Diabetes             8     12.7        100  5.65  23.5
## Total               63   100.00
freq(data,data$sedentarismo,using_na=T,labeldicotomico)

## 
##       absolute relative cumulative   ici   ics
## no          25    39.68      39.68 27.57  52.8
## yes         38    60.32        100  47.2 72.43
## Total       63   100.00
freq(data,data$SAOS,using_na=T,labeldicotomico)

## 
##       absolute relative cumulative   ici   ics
## no          56    88.89      88.89 78.44 95.41
## yes          7    11.11        100  4.59 21.56
## Total       63   100.00
freq(data,data$Diabetes,using_na=T,labeldicotomico)

## 
##       absolute relative cumulative   ici   ics
## no          56    88.89      88.89 78.44 95.41
## yes          7    11.11        100  4.59 21.56
## Total       63   100.00
freq(data,data$Estatinas,using_na=T,labeldicotomico)

## 
##       absolute relative cumulative   ici   ics
## no          38    60.32      60.32  47.2 72.43
## yes         25    39.68        100 27.57  52.8
## Total       63   100.00
data$score=as.numeric(str_replace(data$Score,"%",""))
means(data,data$score)
## 
##                                score
## n                                 63
## Mean                            1.53
## Median                             1
## Sd                              1.98
## Min                                0
## Max                               12
## Range                             12
## Q1                               0.5
## Q3                                 2
## Iqr                              1.5
## Normality                          0
## ICI                             1.03
## SCI                             2.03
## Summary   Median[Q1-Q3]  -->1(0.5-2)

data$framminghan=as.numeric(str_replace(data$Framminghan,"%",""))
means(data,data$framminghan)
## 
##                           framminghan
## n                                  63
## Mean                             7.38
## Median                              5
## Sd                               8.51
## Min                               0.5
## Max                                48
## Range                            47.5
## Q1                                1.5
## Q3                                 10
## Iqr                               8.5
## Normality                           0
## ICI                              5.24
## SCI                              9.53
## Summary   Median[Q1-Q3]  -->5(1.5-10)

data$capacidad_aerobica=as.numeric(data$capacidad_aerobica)
means(data,data$capacidad_aerobica)
## 
##                             capacidad_aerobica
## n                                           63
## Mean                                     72.32
## Median                                    71.9
## Sd                                       23.02
## Min                                       17.5
## Max                                     150.41
## Range                                   132.91
## Q1                                       54.12
## Q3                                        91.1
## Iqr                                      36.98
## Normality                                0.102
## ICI                                      66.52
## SCI                                      78.12
## Summary   Mean[ICI-ICS] --> 72.32(66.52-78.12)

data$METS=as.numeric(data$METS)
## Warning: NAs introduced by coercion
means(data,data$METS)
## 
##                                        METS
## n                                        61
## Mean                                   5.24
## Median                                 5.05
## Sd                                     2.07
## Min                                    2.26
## Max                                    16.9
## Range                                 14.64
## Q1                                     3.81
## Q3                                     6.25
## Iqr                                    2.44
## Normality                                 0
## ICI                                    4.71
## SCI                                    5.77
## Summary   Median[Q1-Q3]  -->5.05(3.81-6.25)

means(data,data$HDL,data$sexo)
## 
##                    sexo = F     sexo = M
## n                        24           38
## Mean                  51.12        45.95
## Median                   53         45.5
## Sd                     10.6        10.37
## Min                      31           29
## Max                      71           72
## Range                    40           43
## Q1                     45.5           39
## Q3                    55.75           50
## Iqr                   10.25           11
## Normal                0.396        0.048
## IIC                   46.65        42.54
## ICS                    55.6        49.36
## Summary2    53 (45.5-55.75) 45.5 (39-50)
## Summary       Median[Q1-Q3]             
## Groups        Homocedastics             
## Normality                No             
## Differences             Yes             
## p-value               0.036             
## Method       Kruskal-Wallis

means(data,data$LDL)
## 
##                                               LDL
## n                                              62
## Mean                                       120.35
## Median                                      117.5
## Sd                                          42.48
## Min                                            40
## Max                                           236
## Range                                         196
## Q1                                          93.75
## Q3                                            148
## Iqr                                         54.25
## Normality                                   0.594
## ICI                                        109.57
## SCI                                        131.14
## Summary   Mean[ICI-ICS] --> 120.35(109.57-131.14)

means(data,data$TG)
## 
##                                             TG
## n                                           62
## Mean                                    157.94
## Median                                   137.5
## Sd                                       94.75
## Min                                         33
## Max                                        555
## Range                                      522
## Q1                                       93.75
## Q3                                       188.5
## Iqr                                      94.75
## Normality                                    0
## ICI                                     133.87
## SCI                                        182
## Summary   Median[Q1-Q3]  -->137.5(93.75-188.5)

# Comparaciones entre Normo e Hipertensos

means(data,data$edad,data$HTA,labeldicotomico)
## 
##                            HTA = no      HTA = yes
## n                                20             43
## Mean                           46.3           54.3
## Median                           46             54
## Sd                             7.42          11.45
## Min                              31             29
## Max                              65             74
## Range                            34             45
## Q1                            42.75           45.5
## Q3                            47.75           61.5
## Iqr                               5             16
## Normal                        0.409          0.345
## IIC                           42.83          50.78
## ICS                           49.77          57.83
## Summary2           46 (42.75-47.75) 54 (45.5-61.5)
## Summary               Median[Q1-Q3]               
## Groups              Heteroscedastic               
## Normality                       Yes               
## Differences                     Yes               
## p-value                       0.002               
## Method      t-Student(Satterhwaite)

tables(data,data$HTA,data$sexo,labeldicotomico)
## 
##      sexo
## HTA    F  M Sum
##   no  11  9  20
##   yes 14 29  43
##   Sum 25 38  63
## 
## by Row (%)
##         F     M
## no  55.00 45.00
## yes 32.55 67.44
##     39.68 60.31
## 
## by Col (%)
##      F     M      
## no  44 23.68 31.74
## yes 56 76.31 68.25
## 
## Chi2 Pearson  p = 0.09

means(data,data$imc,data$HTA)
## 
##                         HTA = 0            HTA = 1
## n                            20                 42
## Mean                      30.73              33.15
## Median                    29.29              33.02
## Sd                         6.07               5.59
## Min                       21.63              20.39
## Max                       42.93              46.02
## Range                      21.3              25.63
## Q1                        26.93              29.37
## Q3                        34.51              35.52
## Iqr                        7.58               6.15
## Normal                    0.249              0.174
## IIC                       27.89               31.4
## ICS                       33.57              34.89
## Summary2    30.73 (27.89-33.57) 33.15 (31.4-34.89)
## Summary           Mean[ICI-ICS]                   
## Groups            Homocedastics                   
## Normality                   Yes                   
## Differences                  No                   
## p-value                   0.126                   
## Method        t-Student(Pooled)

tables(data,data$HTA,data$SM,labeldicotomico,labeldicotomico)
## 
##      SM
## HTA   no yes Sum
##   no   3  17  20
##   yes  3  40  43
##   Sum  6  57  63
## 
## by Row (%)
##        no   yes
## no  15.00 85.00
## yes  6.97 93.02
##      9.52 90.47
## 
## by Col (%)
##     no   yes      
## no  50 29.82 31.74
## yes 50 70.17 68.25
## 
## Fischer Test  p = 0.372

tables(data,data$HTA,data$Diabetes,labeldicotomico,labeldicotomico)
## 
##      Diabetes
## HTA   no yes Sum
##   no  19   1  20
##   yes 37   6  43
##   Sum 56   7  63
## 
## by Row (%)
##        no   yes
## no  95.00  5.00
## yes 86.04 13.95
##     88.88 11.11
## 
## by Col (%)
##        no   yes      
## no  33.92 14.28 31.74
## yes 66.07 85.71 68.25
## 
## Fischer Test  p = 0.415

tables(data,data$HTA,data$sedentarismo,labeldicotomico,labeldicotomico)
## 
##      sedentarismo
## HTA   no yes Sum
##   no  11   9  20
##   yes 14  29  43
##   Sum 25  38  63
## 
## by Row (%)
##        no   yes
## no  55.00 45.00
## yes 32.55 67.44
##     39.68 60.31
## 
## by Col (%)
##     no   yes      
## no  44 23.68 31.74
## yes 56 76.31 68.25
## 
## Chi2 Pearson  p = 0.09

tables(data,data$HTA,data$Estatinas,labeldicotomico,labeldicotomico)
## 
##      Estatinas
## HTA   no yes Sum
##   no  14   6  20
##   yes 24  19  43
##   Sum 38  25  63
## 
## by Row (%)
##        no   yes
## no  70.00 30.00
## yes 55.81 44.18
##     60.31 39.68
## 
## by Col (%)
##        no yes      
## no  36.84  24 31.74
## yes 63.15  76 68.25
## 
## Chi2 Pearson  p = 0.284

means(data,data$score,data$HTA,labeldicotomico)
## 
##                    HTA = no HTA = yes
## n                        20        43
## Mean                   0.57      1.98
## Median                  0.5         1
## Sd                     0.44      2.25
## Min                       0       0.5
## Max                       2        12
## Range                     2      11.5
## Q1                      0.5       0.5
## Q3                      0.5         2
## Iqr                       0       1.5
## Normal                    0         0
## IIC                    0.37      1.28
## ICS                    0.78      2.67
## Summary2      0.5 (0.5-0.5) 1 (0.5-2)
## Summary       Median[Q1-Q3]          
## Groups      Heteroscedastic          
## Normality                No          
## Differences              No          
## p-value              <0.001          
## Method       Kruskal-Wallis

means(data,data$VDMF,data$HTA,labeldicotomico)
## 
##                   HTA = no HTA = yes
## n                       20        43
## Mean                 11.55       7.7
## Median                  10         8
## Sd                    4.77      3.97
## Min                      4         0
## Max                     23        16
## Range                   19        16
## Q1                       9         5
## Q3                   13.25        10
## Iqr                   4.25         5
## Normal               0.015     0.572
## IIC                   9.32      6.48
## ICS                  13.78      8.92
## Summary2      10 (9-13.25)  8 (5-10)
## Summary      Median[Q1-Q3]          
## Groups       Homocedastics          
## Normality               No          
## Differences            Yes          
## p-value              0.002          
## Method      Kruskal-Wallis

means(data,data$capacidad_aerobica,data$HTA,labeldicotomico)
## 
##                       HTA = no         HTA = yes
## n                           20                43
## Mean                     76.89              70.2
## Median                    79.7              63.2
## Sd                       16.15             25.49
## Min                       45.6              17.5
## Max                         98            150.41
## Range                     52.4            132.91
## Q1                       71.68              53.6
## Q3                       88.48             91.19
## Iqr                       16.8             37.59
## Normal                   0.037             0.091
## IIC                      69.33             62.35
## ICS                      84.44             78.04
## Summary2    79.7 (71.68-88.48) 63.2 (53.6-91.19)
## Summary          Median[Q1-Q3]                  
## Groups         Heteroscedastic                  
## Normality                   No                  
## Differences                 No                  
## p-value                  0.243                  
## Method          Kruskal-Wallis

means(data,data$LDL,data$HTA,labeldicotomico)
## 
##                           HTA = no              HTA = yes
## n                               19                     43
## Mean                        125.95                 117.88
## Median                         122                    116
## Sd                           48.72                  39.79
## Min                             40                     44
## Max                            236                    221
## Range                          196                    177
## Q1                              89                   94.5
## Q3                           153.5                    146
## Iqr                           64.5                   51.5
## Normal                        0.96                  0.652
## IIC                         102.47                 105.64
## ICS                         149.43                 130.13
## Summary2    125.95 (102.47-149.43) 117.88 (105.64-130.13)
## Summary              Mean[ICI-ICS]                       
## Groups               Homocedastics                       
## Normality                      Yes                       
## Differences                     No                       
## p-value                      0.495                       
## Method           t-Student(Pooled)

means(data,data$HDL,data$HTA,labeldicotomico)
## 
##                       HTA = no           HTA = yes
## n                           19                  43
## Mean                     47.89               47.98
## Median                      53                  46
## Sd                          11               10.66
## Min                         29                  31
## Max                         69                  72
## Range                       40                  41
## Q1                          37                  39
## Q3                        53.5                53.5
## Iqr                       16.5                14.5
## Normal                   0.254               0.061
## IIC                      42.59               44.69
## ICS                       53.2               51.26
## Summary2    47.89 (42.59-53.2) 47.98 (44.69-51.26)
## Summary          Mean[ICI-ICS]                    
## Groups           Homocedastics                    
## Normality                  Yes                    
## Differences                 No                    
## p-value                  0.978                    
## Method       t-Student(Pooled)

means(data,data$TG,data$HTA,labeldicotomico)
## 
##                    HTA = no        HTA = yes
## n                        19               43
## Mean                 140.21           165.77
## Median                  134              138
## Sd                    65.39           104.89
## Min                      33               37
## Max                     284              555
## Range                   251              518
## Q1                       89             98.5
## Q3                      180            197.5
## Iqr                      91               99
## Normal                0.918                0
## IIC                  108.69           133.49
## ICS                  171.73           198.05
## Summary2       134 (89-180) 138 (98.5-197.5)
## Summary       Median[Q1-Q3]                 
## Groups      Heteroscedastic                 
## Normality                No                 
## Differences              No                 
## p-value               0.598                 
## Method       Kruskal-Wallis

# Comparacion de la VDMF segun SM

means(data,data$VDMF,data$SM,labeldicotomico)
## 
##                        SM = no         SM = yes
## n                            6               57
## Mean                     12.67             8.53
## Median                    10.5                8
## Sd                        5.43             4.34
## Min                          8                0
## Max                         23               22
## Range                       15               22
## Q1                          10                6
## Q3                       13.25               10
## Iqr                       3.25                4
## Normal                   0.059            0.263
## IIC                       6.97             7.37
## ICS                      18.36             9.68
## Summary2    12.67 (6.97-18.36) 8.53 (7.37-9.68)
## Summary          Mean[ICI-ICS]                 
## Groups           Homocedastics                 
## Normality                  Yes                 
## Differences                Yes                 
## p-value                  0.034                 
## Method       t-Student(Pooled)

# Comparaciones solo en grupo SM entre HTA y no HTA

soloSM=data[which(data$SM==1),]
means(soloSM,soloSM$edad,soloSM$HTA,labeldicotomico)
## 
##                        HTA = no           HTA = yes
## n                            17                  40
## Mean                      46.53               54.62
## Median                       46                55.5
## Sd                         8.01               11.79
## Min                          31                  29
## Max                          65                  74
## Range                        34                  45
## Q1                           43               43.75
## Q3                           50                  62
## Iqr                           7               18.25
## Normal                    0.803               0.229
## IIC                       42.41               50.86
## ICS                       50.65               58.39
## Summary2    46.53 (42.41-50.65) 54.62 (50.86-58.39)
## Summary           Mean[ICI-ICS]                    
## Groups            Homocedastics                    
## Normality                   Yes                    
## Differences                 Yes                    
## p-value                   0.012                    
## Method        t-Student(Pooled)

tables(soloSM,soloSM$HTA,soloSM$sexo,labeldicotomico)
## 
##      sexo
## HTA    F  M Sum
##   no   8  9  17
##   yes 12 28  40
##   Sum 20 37  57
## 
## by Row (%)
##         F     M
## no  47.05 52.94
## yes 30.00 70.00
##     35.08 64.91
## 
## by Col (%)
##      F     M      
## no  40 24.32 29.82
## yes 60 75.67 70.17
## 
## Chi2 Pearson  p = 0.217

means(soloSM,soloSM$imc,soloSM$HTA)
## 
##                        HTA = 0             HTA = 1
## n                           17                  39
## Mean                      31.7               33.48
## Median                   30.34               33.04
## Sd                        6.01                5.67
## Min                      21.63               20.39
## Max                      42.93               46.02
## Range                     21.3               25.63
## Q1                       28.07               29.59
## Q3                       37.57               35.78
## Iqr                        9.5                6.19
## Normal                   0.521               0.367
## IIC                      28.61               31.64
## ICS                      34.79               35.31
## Summary2    31.7 (28.61-34.79) 33.48 (31.64-35.31)
## Summary          Mean[ICI-ICS]                    
## Groups           Homocedastics                    
## Normality                  Yes                    
## Differences                 No                    
## p-value                  0.294                    
## Method       t-Student(Pooled)

tables(soloSM,soloSM$HTA,soloSM$Diabetes,labeldicotomico,labeldicotomico)
## 
##      Diabetes
## HTA   no yes Sum
##   no  16   1  17
##   yes 34   6  40
##   Sum 50   7  57
## 
## by Row (%)
##        no   yes
## no  94.11  5.88
## yes 85.00 15.00
##     87.71 12.28
## 
## by Col (%)
##     no   yes      
## no  32 14.28 29.82
## yes 68 85.71 70.17
## 
## Fischer Test  p = 0.662

tables(soloSM,soloSM$HTA,soloSM$sedentarismo,labeldicotomico,labeldicotomico)
## 
##      sedentarismo
## HTA   no yes Sum
##   no   8   9  17
##   yes 12  28  40
##   Sum 20  37  57
## 
## by Row (%)
##        no   yes
## no  47.05 52.94
## yes 30.00 70.00
##     35.08 64.91
## 
## by Col (%)
##     no   yes      
## no  40 24.32 29.82
## yes 60 75.67 70.17
## 
## Chi2 Pearson  p = 0.217

tables(soloSM,soloSM$HTA,soloSM$Estatinas,labeldicotomico,labeldicotomico)
## 
##      Estatinas
## HTA   no yes Sum
##   no  11   6  17
##   yes 22  18  40
##   Sum 33  24  57
## 
## by Row (%)
##        no   yes
## no  64.70 35.29
## yes 55.00 45.00
##     57.89 42.10
## 
## by Col (%)
##        no yes      
## no  33.33  25 29.82
## yes 66.66  75 70.17
## 
## Chi2 Pearson  p = 0.497

means(soloSM,soloSM$score,soloSM$HTA,labeldicotomico)
## 
##                    HTA = no    HTA = yes
## n                        17           40
## Mean                   0.59         2.08
## Median                  0.5            1
## Sd                     0.48          2.3
## Min                       0          0.5
## Max                       2           12
## Range                     2         11.5
## Q1                      0.5          0.5
## Q3                      0.5         2.25
## Iqr                       0         1.75
## Normal                0.001            0
## IIC                    0.34         1.34
## ICS                    0.83         2.81
## Summary2      0.5 (0.5-0.5) 1 (0.5-2.25)
## Summary       Median[Q1-Q3]             
## Groups      Heteroscedastic             
## Normality                No             
## Differences             Yes             
## p-value              <0.001             
## Method       Kruskal-Wallis

means(soloSM,soloSM$VDMF,soloSM$HTA,labeldicotomico)
## 
##                   HTA = no    HTA = yes
## n                       17           40
## Mean                 10.82         7.55
## Median                  10          7.5
## Sd                    4.22         4.06
## Min                      4            0
## Max                     22           16
## Range                   18           16
## Q1                       9            5
## Q3                      13         9.25
## Iqr                      4         4.25
## Normal               0.046        0.388
## IIC                   8.66         6.25
## ICS                  12.99         8.85
## Summary2         10 (9-13) 7.5 (5-9.25)
## Summary      Median[Q1-Q3]             
## Groups       Homocedastics             
## Normality               No             
## Differences            Yes             
## p-value              0.006             
## Method      Kruskal-Wallis

means(soloSM,soloSM$capacidad_aerobica,soloSM$HTA,labeldicotomico)
## 
##                            HTA = no           HTA = yes
## n                                17                  40
## Mean                          74.16               69.82
## Median                         78.4               63.05
## Sd                            15.89               25.94
## Min                            45.6                17.5
## Max                              96              150.41
## Range                          50.4              132.91
## Q1                               71               53.58
## Q3                             81.6               90.95
## Iqr                            10.6               37.37
## Normal                        0.062               0.109
## IIC                              66               61.52
## ICS                           82.33               78.11
## Summary2             78.4 (71-81.6) 63.05 (53.58-90.95)
## Summary               Median[Q1-Q3]                    
## Groups              Heteroscedastic                    
## Normality                       Yes                    
## Differences                      No                    
## p-value                       0.443                    
## Method      t-Student(Satterhwaite)

means(soloSM,soloSM$LDL,soloSM$HTA,labeldicotomico)
## 
##                          HTA = no              HTA = yes
## n                              17                     40
## Mean                       127.41                 118.92
## Median                        122                  116.5
## Sd                             50                   40.3
## Min                            40                     44
## Max                           236                    221
## Range                         196                    177
## Q1                             99                   97.5
## Q3                            159                 147.25
## Iqr                            60                  49.75
## Normal                      0.989                  0.598
## IIC                         101.7                 106.04
## ICS                        153.12                 131.81
## Summary2    127.41 (101.7-153.12) 118.92 (106.04-131.81)
## Summary             Mean[ICI-ICS]                       
## Groups              Homocedastics                       
## Normality                     Yes                       
## Differences                    No                       
## p-value                     0.502                       
## Method          t-Student(Pooled)

means(soloSM,soloSM$HDL,soloSM$HTA,labeldicotomico)
## 
##                   HTA = no  HTA = yes
## n                       17         40
## Mean                 45.76      47.35
## Median                  50         46
## Sd                    9.44      10.61
## Min                     29         31
## Max                     58         72
## Range                   29         41
## Q1                      37         39
## Q3                      53         53
## Iqr                     16         14
## Normal               0.025      0.033
## IIC                  40.91      43.96
## ICS                  50.62      50.74
## Summary2        50 (37-53) 46 (39-53)
## Summary      Median[Q1-Q3]           
## Groups       Homocedastics           
## Normality               No           
## Differences             No           
## p-value              0.903           
## Method      Kruskal-Wallis

means(soloSM,soloSM$TG,soloSM$HTA,labeldicotomico)
## 
##                    HTA = no           HTA = yes
## n                        17                  40
## Mean                 147.24              169.55
## Median                  140               141.5
## Sd                    65.67              107.43
## Min                      33                  37
## Max                     284                 555
## Range                   251                 518
## Q1                      116               99.75
## Q3                      180               206.5
## Iqr                      64              106.75
## Normal                0.955                   0
## IIC                  113.47              135.19
## ICS                     181              203.91
## Summary2      140 (116-180) 141.5 (99.75-206.5)
## Summary       Median[Q1-Q3]                    
## Groups      Heteroscedastic                    
## Normality                No                    
## Differences              No                    
## p-value               0.807                    
## Method       Kruskal-Wallis

# Para ver el peso de cada factor sobre la VDMF hacemos una regresion lineal multiple

reg=lm(data$VDMF ~ data$HDL + data$TG + data$HTA + data$Glicemia + data$Cintura + data$sexo + data$edad + data$LDL)
summary(reg)
## 
## Call:
## lm(formula = data$VDMF ~ data$HDL + data$TG + data$HTA + data$Glicemia + 
##     data$Cintura + data$sexo + data$edad + data$LDL)
## 
## Residuals:
##     Min      1Q  Median      3Q     Max 
## -7.0918 -2.1430 -0.3988  2.5138  7.2188 
## 
## Coefficients:
##                Estimate Std. Error t value Pr(>|t|)    
## (Intercept)   25.391661   5.547312   4.577 2.88e-05 ***
## data$HDL       0.012601   0.051935   0.243   0.8092    
## data$TG       -0.007578   0.005813  -1.304   0.1980    
## data$HTA      -3.024003   1.180588  -2.561   0.0133 *  
## data$Glicemia -0.648578   0.740941  -0.875   0.3853    
## data$Cintura  -0.091298   0.038773  -2.355   0.0223 *  
## data$sexoM    -1.567359   1.280170  -1.224   0.2262    
## data$edad      0.002406   0.052030   0.046   0.9633    
## data$LDL      -0.022007   0.012277  -1.793   0.0787 .  
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## Residual standard error: 3.842 on 53 degrees of freedom
##   (1 observation deleted due to missingness)
## Multiple R-squared:  0.3962, Adjusted R-squared:  0.3051 
## F-statistic: 4.347 on 8 and 53 DF,  p-value: 0.0004435
reg=lm(data$VDMF ~ data$PAS + data$PAD + data$PP)
summary(reg)
## 
## Call:
## lm(formula = data$VDMF ~ data$PAS + data$PAD + data$PP)
## 
## Residuals:
##     Min      1Q  Median      3Q     Max 
## -9.7426 -1.7134 -0.1855  1.7646 11.4350 
## 
## Coefficients:
##             Estimate Std. Error t value Pr(>|t|)    
## (Intercept) 24.32165    4.37452   5.560 7.16e-07 ***
## data$PAS     0.07476    0.43411   0.172    0.864    
## data$PAD    -0.18826    0.43391  -0.434    0.666    
## data$PP     -0.21225    0.42592  -0.498    0.620    
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## Residual standard error: 4.188 on 58 degrees of freedom
##   (1 observation deleted due to missingness)
## Multiple R-squared:  0.2052, Adjusted R-squared:  0.1641 
## F-statistic: 4.991 on 3 and 58 DF,  p-value: 0.003791