http://marceloarayasalas.weebly.com/



mixed models acoustic parameters

## [[1]]
## [[1]][[1]]
## [[1]][[1]]$Species
## [1] "M"
## 
## [[1]][[1]]$best.model
## [1] "meanfun~dist + height + site + note + (1 | selec)"
## 
## [[1]][[1]]$effect.sizes
##                 Estimate   Std..Error         df   t.value     Pr...t..
## (Intercept)  2.030105595 0.0515181152  11.264992 39.405665 1.993961e-13
## dist        -0.005738776 0.0007364755 738.038140 -7.792216 2.242651e-14
## heightB      0.031858835 0.0202753323 738.120409  1.571310 1.165392e-01
## siteLC       0.086875662 0.0202479148 738.115787  4.290598 2.019177e-05
## noteNote 2   0.168713641 0.0669125472   8.017292  2.521405 3.567090e-02
##                   X2.5..      X97.5..
## (Intercept)  1.931403810  2.128785327
## dist        -0.007181650 -0.004296842
## heightB     -0.007882759  0.071536484
## siteLC       0.047256207  0.126568241
## noteNote 2   0.039225258  0.298278821
## 
## 
## [[1]][[2]]
## [[1]][[2]]$Species
## [1] "T"
## 
## [[1]][[2]]$best.model
## [1] "meanfun~dist + site + hour + (1 | selec)"
## 
## [[1]][[2]]$effect.sizes
##                 Estimate  Std..Error        df   t.value     Pr...t..
## (Intercept)  1.256993572 0.053114619  67.80746 23.665680 0.000000e+00
## dist        -0.003442529 0.000775411 195.30715 -4.439618 1.505754e-05
## siteLC       0.074567631 0.021922274 195.51465  3.401455 8.127338e-04
## hour        -0.016664516 0.005059726 196.02909 -3.293561 1.173715e-03
##                   X2.5..      X97.5..
## (Intercept)  1.155061690  1.358296272
## dist        -0.004952207 -0.001921253
## siteLC       0.031953808  0.117645959
## hour        -0.026481516 -0.006706949
## 
## 
## 
## [[2]]
## [[2]][[1]]
## [[2]][[1]]$Species
## [1] "M"
## 
## [[2]][[1]]$best.model
## [1] "meandom~dist + height + site + hour + note + (1 | selec)"
## 
## [[2]][[1]]$effect.sizes
##                Estimate  Std..Error         df    t.value     Pr...t..
## (Intercept)  2.80781229 0.102601990  36.530536  27.366061 0.000000e+00
## dist        -0.02107351 0.001199555 737.060320 -17.567782 0.000000e+00
## heightB     -0.25503192 0.033018333 737.160704  -7.723949 3.685940e-14
## siteLC      -0.31479807 0.032976825 737.158826  -9.546039 0.000000e+00
## hour        -0.01147664 0.007468725 737.265726  -1.536627 1.248137e-01
## noteNote 2   0.15649582 0.099005920   8.036124   1.580671 1.524394e-01
##                  X2.5..      X97.5..
## (Intercept)  2.61289027  3.002732310
## dist        -0.02342216 -0.018726651
## heightB     -0.31970430 -0.190458617
## siteLC      -0.37928989 -0.250206662
## hour        -0.02609262  0.003142236
## noteNote 2  -0.03513638  0.348179559
## 
## 
## [[2]][[2]]
## [[2]][[2]]$Species
## [1] "T"
## 
## [[2]][[2]]$best.model
## [1] "meandom~dist + height + site + (1 | selec)"
## 
## [[2]][[2]]$effect.sizes
##                 Estimate  Std..Error       df   t.value     Pr...t..
## (Intercept)  1.560316832 0.035728868 197.0001 43.671040 0.000000e+00
## dist        -0.008174325 0.001165168 197.0001 -7.015578 3.591527e-11
## heightB     -0.058097468 0.032687668 197.0001 -1.777351 7.705334e-02
## siteLC      -0.211650615 0.032861993 197.0001 -6.440590 8.909082e-10
##                  X2.5..      X97.5..
## (Intercept)  1.49065728  1.629976384
## dist        -0.01044602 -0.005902631
## heightB     -0.12182768  0.005632743
## siteLC      -0.27572070 -0.147580528
## 
## 
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## [[3]]
## [[3]][[1]]
## [[3]][[1]]$Species
## [1] "M"
## 
## [[3]][[1]]$best.model
## [1] "modindx~dist + height + site + (1 | selec)"
## 
## [[3]][[1]]$effect.sizes
##                Estimate   Std..Error       df   t.value     Pr...t..
## (Intercept) 0.048061564 0.0067503009 118.1535  7.119914 9.086643e-11
## dist        0.003593308 0.0002083347 737.9968 17.247766 0.000000e+00
## heightB     0.047470570 0.0057344097 738.6292  8.278197 4.440892e-16
## siteLC      0.029684376 0.0057267699 738.5652  5.183441 2.814353e-07
##                  X2.5..     X97.5..
## (Intercept) 0.034933560 0.061190589
## dist        0.003184836 0.004000936
## heightB     0.036200552 0.058670383
## siteLC      0.018494147 0.040931281
## 
## 
## [[3]][[2]]
## [[3]][[2]]$Species
## [1] "T"
## 
## [[3]][[2]]$best.model
## [1] "modindx~dist + height + (1 | selec)"
## 
## [[3]][[2]]$effect.sizes
##                Estimate   Std..Error       df   t.value     Pr...t..
## (Intercept) 0.022572294 0.0057937371 198.0025  3.895982 1.337389e-04
## dist        0.002515009 0.0002113281 198.0025 11.900968 0.000000e+00
## heightB     0.037468815 0.0059337598 198.0025  6.314515 1.747267e-09
##                  X2.5..     X97.5..
## (Intercept) 0.011247774 0.033896815
## dist        0.002101944 0.002928074
## heightB     0.025870604 0.049067025
## 
## 
## 
## [[4]]
## [[4]][[1]]
## [[4]][[1]]$Species
## [1] "M"
## 
## [[4]][[1]]$best.model
## [1] "peakf~dist + height + site + hour + (1 | selec)"
## 
## [[4]][[1]]$effect.sizes
##                Estimate  Std..Error  df    t.value     Pr...t..
## (Intercept)  2.62002552 0.170384027 746  15.377178 0.000000e+00
## dist        -0.02914723 0.002655214 746 -10.977354 0.000000e+00
## heightB     -0.49883462 0.073065297 746  -6.827244 1.794653e-11
## siteLC      -0.58923397 0.072974846 746  -8.074481 2.664535e-15
## hour         0.03455788 0.016522199 746   2.091603 3.681165e-02
##                   X2.5..     X97.5..
## (Intercept)  2.286766453  2.95328459
## dist        -0.034340640 -0.02395382
## heightB     -0.641745155 -0.35592408
## siteLC      -0.731967593 -0.44650035
## hour         0.002241633  0.06687413
## 
## 
## [[4]][[2]]
## [[4]][[2]]$Species
## [1] "T"
## 
## [[4]][[2]]$best.model
## [1] "peakf~dist + height + site + (1 | selec)"
## 
## [[4]][[2]]$effect.sizes
##                 Estimate  Std..Error        df   t.value     Pr...t..
## (Intercept)  1.473257749 0.056248560  11.63091 26.191920 1.054179e-11
## dist        -0.007398289 0.001576061 195.38828 -4.694165 5.029695e-06
## heightB     -0.102970587 0.044190290 195.13872 -2.330163 2.081972e-02
## siteLC      -0.117437198 0.044489400 195.74281 -2.639667 8.967563e-03
##                  X2.5..      X97.5..
## (Intercept)  1.36488110  1.581294660
## dist        -0.01049355 -0.004332851
## heightB     -0.18957679 -0.016842279
## siteLC      -0.20501641 -0.031100906
## 
## 
## 
## [[5]]
## [[5]][[1]]
## [[5]][[1]]$Species
## [1] "M"
## 
## [[5]][[1]]$best.model
## [1] "sp.ent~dist + height + site + hour + (1 | selec)"
## 
## [[5]][[1]]$effect.sizes
##                Estimate   Std..Error        df   t.value     Pr...t..
## (Intercept) 0.654105610 1.197423e-02  15.45881 54.626116 0.000000e+00
## dist        0.005246736 9.296793e-05 737.02174 56.435977 0.000000e+00
## heightB     0.034787656 2.559064e-03 737.03599 13.593898 0.000000e+00
## siteLC      0.027581740 2.555846e-03 737.03518 10.791628 0.000000e+00
## hour        0.003619247 5.788765e-04 737.05152  6.252192 6.850176e-10
##                  X2.5..     X97.5..
## (Intercept) 0.630176845 0.678032794
## dist        0.005064785 0.005428699
## heightB     0.029779667 0.039796877
## siteLC      0.022578765 0.032583380
## hour        0.002486261 0.004752215
## 
## 
## [[5]][[2]]
## [[5]][[2]]$Species
## [1] "T"
## 
## [[5]][[2]]$best.model
## [1] "sp.ent~dist + height + site + hour + (1 | selec)"
## 
## [[5]][[2]]$effect.sizes
##                Estimate   Std..Error         df   t.value     Pr...t..
## (Intercept) 0.727504996 0.0140010798   7.264884 51.960635 1.308678e-10
## dist        0.004077709 0.0001510200 194.037375 27.001112 0.000000e+00
## heightB     0.035941468 0.0042392432 193.997928  8.478274 5.773160e-15
## siteLC      0.016519265 0.0042709459 194.075407  3.867823 1.498067e-04
## hour        0.002764641 0.0009876556 194.175785  2.799196 5.640083e-03
##                   X2.5..     X97.5..
## (Intercept) 0.7000675293 0.755179967
## dist        0.0037842976 0.004373210
## heightB     0.0276861708 0.044215656
## siteLC      0.0082313596 0.024887873
## hour        0.0008525139 0.004705498
## 
## 
## 
## [[6]]
## [[6]][[1]]
## [[6]][[1]]$Species
## [1] "M"
## 
## [[6]][[1]]$best.model
## [1] "snr~dist + height + site + hour + (1 | selec)"
## 
## [[6]][[1]]$effect.sizes
##                Estimate  Std..Error       df    t.value     Pr...t..
## (Intercept)  7.85351248 0.384933969 552.1473  20.402233 0.000000e+00
## dist        -0.12517322 0.005902216 737.1271 -21.207835 0.000000e+00
## heightB     -1.22041759 0.162436363 737.6661  -7.513204 1.674216e-13
## siteLC      -1.02111270 0.162233890 737.6325  -6.294078 5.303620e-10
## hour        -0.06746517 0.036736796 738.2321  -1.836447 6.669354e-02
##                 X2.5..      X97.5..
## (Intercept)  7.1017805  8.603625262
## dist        -0.1367129 -0.113608247
## heightB     -1.5377709 -0.901854552
## siteLC      -1.3390718 -0.703993262
## hour        -0.1392887  0.004513964
## 
## 
## [[6]][[2]]
## [[6]][[2]]$Species
## [1] "T"
## 
## [[6]][[2]]$best.model
## [1] "snr~dist + height + site + hour + (1 | selec)"
## 
## [[6]][[2]]$effect.sizes
##                Estimate Std..Error        df   t.value     Pr...t..
## (Intercept)  6.51384224 0.72173106  43.93165  9.025304 1.451572e-11
## dist        -0.08195268 0.01006998 194.24422 -8.138320 4.707346e-14
## heightB     -1.17972842 0.28271948 194.08627 -4.172788 4.537191e-05
## siteLC      -0.42219536 0.28473860 194.39174 -1.482747 1.397610e-01
## hour        -0.11268235 0.06581657 194.75739 -1.712067 8.847615e-02
##                 X2.5..     X97.5..
## (Intercept)  5.1402534  7.88738200
## dist        -0.1015678 -0.06231224
## heightB     -1.7310536 -0.62882459
## siteLC      -0.9765649  0.13332419
## hour        -0.2408380  0.01563967

mixed models cross-correlation similarities

## [[1]]
## [[1]]$Species
## [1] M
## Levels: M T
## 
## [[1]]$best.model
## [1] "xc.mean~dist + height + note + (1 | selec)"
## 
## [[1]]$effect.sizes
##                 Estimate   Std..Error         df    t.value     Pr...t..
## (Intercept)  0.673412816 0.0231171373   9.037110  29.130459 3.016019e-10
## dist        -0.007111937 0.0002054332 148.003786 -34.619218 0.000000e+00
## heightB     -0.034796505 0.0045936262 148.003786  -7.574953 3.596234e-12
## noteNote 2   0.076333783 0.0317096180   8.000007   2.407275 4.268928e-02
##                  X2.5..      X97.5..
## (Intercept)  0.62886810  0.717957526
## dist        -0.00751446 -0.006709414
## heightB     -0.04379718 -0.025795824
## noteNote 2   0.01495398  0.137713577
## 
## 
## [[2]]
## [[2]]$Species
## [1] T
## Levels: M T
## 
## [[2]]$best.model
## [1] "xc.mean~dist + height + (1 | selec)"
## 
## [[2]]$effect.sizes
##                 Estimate  Std..Error      df    t.value     Pr...t..
## (Intercept)  0.734490924 0.026742242 42.0002  27.465570 0.000000e+00
## dist        -0.009619146 0.000899443 42.0002 -10.694559 1.456613e-13
## heightB     -0.147855595 0.020286291 42.0002  -7.288449 5.637812e-09
##                  X2.5..      X97.5..
## (Intercept)  0.68275421  0.786227642
## dist        -0.01135925 -0.007879044
## heightB     -0.18710235 -0.108608845

mixed models DTW similarities

## [[1]]
## [[1]]$Species
## [1] M
## Levels: M T
## 
## [[1]]$best.model
## [1] "dtw.similarity~dist + height + site + note + (1 | selec)"
## 
## [[1]]$effect.sizes
##                 Estimate   Std..Error         df   t.value     Pr...t..
## (Intercept)  0.193454664 0.0741676138   9.165005  2.608344 2.794173e-02
## dist        -0.001128149 0.0006433725 147.000394 -1.753493 8.160167e-02
## heightB     -0.063021781 0.0143862475 147.000394 -4.380696 2.236375e-05
## siteLC      -0.042213840 0.0143862475 147.000394 -2.934319 3.879821e-03
## noteNote 2   0.193415712 0.1013769967   8.000011  1.907886 9.283316e-02
##                   X2.5..       X97.5..
## (Intercept)  0.050636663  0.3362726878
## dist        -0.002384497  0.0001281985
## heightB     -0.091114575 -0.0349289870
## siteLC      -0.070306634 -0.0141210462
## noteNote 2  -0.002818088  0.3896495416
## 
## 
## [[2]]
## [[2]]$Species
## [1] T
## Levels: M T
## 
## [[2]]$best.model
## [1] "dtw.similarity~1 + (1 | selec)"
## 
## [[2]]$effect.sizes
##    Estimate Std..Error  t.value ci.3.nrow.ci....
## 1 0.1382913 0.05150162 2.685183       0.02100483
## 2 0.1382913 0.05150162 2.685183       0.25582502