Behavior part 2: Perceived risk

Questions 11, 20. Perceived risk.

## Create survey object.
options(digits = 4)
options(survey.lonely.psu = "adjust")
des <- svydesign(ids = ~1, weights = ~weight, data = df[is.na(df$weight)==F, ])

Q11. How do you rate your risk of getting influenza if you visited each of the following locations?

# subset question data, rename columns, gather into single column
q11_df <- df %>%
  select(CaseID, PPGENDER, PPAGE, ppagecat, PPETHM, PPINCIMP, PPEDUC, PPEDUCAT,
         work, PPWORK, marital, PPMARIT, PPMSACAT, ppreg9, PPSTATEN, PPHOUSE, PPRENT, PPNET,
         Q11_1:Q11_11, weight) %>%
  rename(Work = Q11_1,
         Schools = Q11_2,
         Day_care = Q11_3,
         Stores = Q11_4,
         Restaurants = Q11_5,
         Libraries = Q11_6,
         Hospitals = Q11_7,
         Doctors_office = Q11_8,
         Public_transp = Q11_9,
         Family_friends = Q11_10,
         Other = Q11_11) %>%
  gather(Q11_q, Q11_r, Work:Other, na.rm = T) %>%
  mutate(Q11_q = as.factor(Q11_q))
# survey design
options(digits = 4)
options(survey.lonely.psu = "adjust")
des11 <- svydesign(ids = ~1, weights = ~weight, data = q11_df[is.na(q11_df$weight)==F, ])

Gender, age, ethnicity, income

# weighted data frame
q11 <- data.frame(svytable(~Q11_q + Q11_r + PPGENDER + ppagecat + PPETHM + PPINCIMP, des11, round = T))
# plot templates
title <- ggtitle("How do you rate your risk of getting influenza if you visited each of the following locations?")
## main plot
p <- ggplot(q11, aes(Q11_q, weight = Freq)) + ptext
p + geom_bar(position = 'fill') + aes(fill = Q11_r) + title

# plot2: exclude 'Don_t know' response
p2 <- ggplot(q11[q11$Q11_r != "Don_t Know", ], aes(Q11_q, weight = Freq)) + ptext
p2 + geom_bar(position = "fill") + aes(Q11_q, fill = Q11_r)

p2 + geom_bar() + aes(Q11_r, fill = Q11_r) + facet_wrap(~Q11_q) + ptext2

p2 + geom_bar() + aes(Q11_q, fill = Q11_q) + facet_wrap(~Q11_r) + ptext2

# select 'High Risk' response only?
#px <- ggplot(q11[q11$Q11_r == "High Risk", ], aes(weight = Freq)) + ptext
# by gender
p2 + geom_bar() + aes(PPGENDER, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By gender")

p2 + geom_bar(position = "fill") + aes(PPGENDER, fill = Q11_r) + facet_wrap(~Q11_q)

p2 + geom_bar() + aes(Q11_q, fill = PPGENDER) + facet_wrap(~Q11_r)

p2 + geom_bar(position = 'fill') + aes(Q11_q, fill = PPGENDER) + facet_wrap(~Q11_r) + ggtitle("By gender")

p2 + geom_bar() + aes(PPGENDER, fill = PPGENDER) + facet_grid(Q11_q~Q11_r) + coord_flip() + ptext2

# age boxplot
# need to subset by group
svyboxplot(PPAGE~Q11_q, des11, main = "Age boxplot per response")

# by age group
p2 + geom_bar() + aes(ppagecat, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By age group")

p2 + geom_bar(position = "fill") + aes(ppagecat, fill = Q11_r) + facet_wrap(~Q11_q)

p2 + geom_bar() + aes(Q11_q, fill = ppagecat) + facet_wrap(~Q11_r)

p2 + geom_bar(position = 'fill') + aes(Q11_q, fill = ppagecat) + facet_wrap(~Q11_r) + ggtitle("By age group")

p2 + geom_bar() + aes(ppagecat, fill = ppagecat) + facet_grid(Q11_q~Q11_r) + ptext2

# by ethnic group
p2 + geom_bar() + aes(PPETHM, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By ethnic group")

Error in prettyNum(.Internal(format(x, trim, digits, nsmall, width, 3L,  : 
  first argument must be atomic

p2 + geom_bar(position = "fill") + aes(PPETHM, fill = Q11_r) + facet_wrap(~Q11_q)

p2 + geom_bar() + aes(Q11_q, fill = PPETHM) + facet_wrap(~Q11_r)

p2 + geom_bar(position = 'fill') + aes(Q11_q, fill = PPETHM) + facet_wrap(~Q11_r) + ggtitle("By ethnic group")

p2 + geom_bar() + aes(PPETHM, fill = PPETHM) + facet_grid(Q11_q~Q11_r) + ptext2

p2 + geom_bar() + aes(Q11_r, fill = Q11_r) + facet_grid(Q11_q~PPETHM) + ptext2

# by income
p2 + geom_bar() + aes(PPINCIMP, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By income") + ptext2

p2 + geom_bar(position = "fill") + aes(PPINCIMP, fill = Q11_r) + facet_wrap(~Q11_q) + ptext2

p2 + geom_bar() + aes(Q11_q, fill = PPINCIMP) + facet_wrap(~Q11_r)

p2 + geom_bar(position = 'fill') + aes(Q11_q, fill = PPINCIMP) + facet_wrap(~Q11_r) + ggtitle("By income group")

p2 + geom_bar() + aes(PPINCIMP, fill = PPINCIMP) + facet_grid(Q11_q~Q11_r) + ptext2

Education, work, marital status

# update weighted data frame
q11.2 <- data.frame(svytable(~Q11_q + Q11_r + PPEDUC + PPEDUCAT + work + PPWORK + marital + PPMARIT, des11, round = T))
# restate plots
p3 <- ggplot(q11.2[q11.2$Q11_r != "Don_t Know", ], aes(Q11_q, weight = Freq)) + ptext

# by education
p3 + geom_bar() + aes(PPEDUCAT, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By education")

p3 + geom_bar(position = "fill") + aes(PPEDUCAT, fill = Q11_r) + facet_wrap(~Q11_q)

p3 + geom_bar() + aes(Q11_q, fill = PPEDUCAT) + facet_wrap(~Q11_r)

p3 + geom_bar(position = 'fill') + aes(Q11_q, fill = PPEDUCAT) + facet_wrap(~Q11_r) + ggtitle("By education")

p3 + geom_bar() + aes(PPEDUCAT, fill = PPEDUCAT) + facet_grid(Q11_q~Q11_r) + ptext2

p3 + geom_bar() + aes(Q11_r, fill = Q11_r) + facet_grid(Q11_q~PPEDUCAT) + ptext2

# by work
p3 + geom_bar() + aes(work, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By employment status")

p3 + geom_bar(position = "fill") + aes(work, fill = Q11_r) + facet_wrap(~Q11_q)

# by marital
p3 + geom_bar() + aes(marital, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By marital status")

p3 + geom_bar(position = "fill") + aes(marital, fill = Q11_r) + facet_wrap(~Q11_q)

Metro status, region, state, house type, housing status, internet availability

# update weighted data frame
q11.3 <- data.frame(svytable(~Q11_q + Q11_r + PPMSACAT + ppreg9 + PPSTATEN + PPHOUSE + PPRENT + PPNET, des11, round = T))
# restate plots
p4 <- ggplot(q11.3[q11.3$Q11_r != "Don_t Know", ], aes(Q11_q, weight = Freq)) + ptext

# by metro status
p4 + geom_bar(position = "fill") + aes(Q11_r, fill = PPMSACAT) + facet_wrap(~Q11_q) + ggtitle("By metro status")

p4 + geom_bar(position = "fill") + aes(PPMSACAT, fill = Q11_r) + facet_wrap(~Q11_q)

# by region
p4 + geom_bar(position = "fill") + aes(Q11_r, fill = ppreg9) + facet_wrap(~Q11_q) + ggtitle("By region")

p4 + geom_bar() + aes(ppreg9, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By region")

# by state
p4 + geom_bar() + aes(Q11_r, fill = PPSTATEN) + facet_wrap(~Q11_q) + ggtitle("By state")

p4 + geom_bar() + aes(PPSTATEN, fill = Q11_q) + coord_flip() + ggtitle("By state")

# by house type
p4 + geom_bar(position = "fill") + aes(Q11_r, fill = PPHOUSE) + facet_wrap(~Q11_q)

p4 + geom_bar(position = "fill") + aes(fill = PPHOUSE) + ggtitle("By house type")

# housing status
p4 + geom_bar(position = "fill") + aes(Q11_r, fill = PPHOUSE) + facet_wrap(~Q11_q)

p4 + geom_bar() + aes(PPHOUSE, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By housing")

# by internet availability
p4 + geom_bar(position = "fill") + aes(Q11_r, fill = PPNET) + facet_wrap(~Q11_q)

p4 + geom_bar(position = "fill") + aes(PPNET, fill = Q11_r) + facet_wrap(~Q11_q) + ggtitle("By internet availability")

Q20. How effective do you think the influenza vaccine is in protecting people from becoming sick with influenza?

Gender, age, ethnicity, income, education

# weighted data frame
q20 <- data.frame(svytable(~Q20 + PPGENDER + ppagecat + PPETHM + PPINCIMP + 
                             PPEDUC + PPEDUCAT, des, round = T))
# plot templates
title <- ggtitle("How effective do you think the influenza vaccine is in protecting people from becoming sick with influenza?")
## main plot
p <- ggplot(q20, aes(Q20, weight = Freq)) + ptext
p + geom_bar() + title

## plot2: exclude 'Don_t know' column
p2 <- ggplot(q20[!(q20$Q20)=='Don_t know', ], aes(Q20, weight = Freq)) + ptext
# by gender
p + geom_bar() + aes(PPGENDER, fill = PPGENDER) + facet_wrap(~Q20)+ ggtitle("By gender")

p + geom_bar(position = "fill") + aes(PPGENDER, fill = Q20)

# age boxplot
svyboxplot(PPAGE~Q20, des, main = "Age boxplot per response")

# by age group
p + geom_bar() + aes(ppagecat, fill = ppagecat) + facet_wrap(~Q20) + ggtitle("By age group")

p + geom_bar(position = "fill") + aes(ppagecat, fill = Q20) + ggtitle("By age group")

# by ethnic group
p + geom_bar() + aes(PPETHM, fill = PPETHM) + facet_wrap(~Q20) + ggtitle("By ethnic group")

p + geom_bar(position = "fill") + aes(PPETHM, fill = Q20) + ggtitle("By ethnic group")

p + geom_bar(position = "fill") + aes(fill = PPETHM)

p + geom_bar() + aes(fill = PPETHM) + ggtitle("By ethnic group")

p + geom_bar() + aes(fill = Q20) + facet_wrap(~PPETHM) + ggtitle("By ethnic group")

# by income
p2 + geom_bar() + aes(PPINCIMP, fill = PPINCIMP) + facet_wrap(~Q20) + ptext2 + ggtitle("By income")

p2 + geom_bar(position = "fill") + aes(PPINCIMP, fill = Q20) + ggtitle("By income")

p2 + geom_bar() + aes(fill = Q20) + facet_wrap(~PPINCIMP) + ggtitle("By income")

p2 + geom_bar(position = "fill") + aes(fill = PPINCIMP) + ggtitle("By income")

# by education
p + geom_bar() + aes(PPEDUC, fill = PPEDUC) + facet_wrap(~Q20) + ptext2 + ggtitle("By education")

p + geom_bar(position = "fill") + aes(PPEDUC, fill = Q20) + ggtitle("By education")

p + geom_bar() + aes(fill = Q20) + facet_wrap(~PPEDUC) + ggtitle("By education")

p + geom_bar(position = "dodge") + aes(fill = PPEDUCAT) + ggtitle("By education")

p + geom_bar(position = "fill") + aes(fill = PPEDUCAT) + ggtitle("By education")

Marital status, metro status, region, state of residency, house type, housing status, internet availability

# update weighted data frame
q20.2 <- data.frame(svytable(~Q20 + marital + PPMARIT + PPMSACAT + ppreg9 + 
                            PPSTATEN + PPHOUSE + PPRENT + PPNET, des, round = T))
# restate plots
p3 <- ggplot(q20.2, aes(Q20, weight = Freq)) + ptext
p4 <- ggplot(q20.2[!(q20.2$Q20)=='Don_t know', ], aes(Q20, weight = Freq)) + ptext

# by marital
p3 + geom_bar() + aes(marital, fill = marital) + facet_wrap(~Q20) + ggtitle("By marital status")

p3 + geom_bar(position = "fill") + aes(marital, fill = Q20)

p3 + geom_bar() + aes(PPMARIT, fill = PPMARIT) + facet_wrap(~Q20)

p3 + geom_bar() + aes(PPMARIT, fill = Q20) + ggtitle("By marital status")

p3 + geom_bar(position = "fill") + aes(PPMARIT, fill = Q20) + ggtitle("By marital status")

# by metro
p3 + geom_bar() + aes(fill = PPMSACAT) + ggtitle("By metro status")

p3 + geom_bar(position = "fill") + aes(PPMSACAT, fill = Q20)

# by region
p3 + geom_bar() + aes(ppreg9, fill = ppreg9) + facet_wrap(~Q20)+ ggtitle("By region")

p3 + geom_bar(position = "fill") + aes(ppreg9, fill = Q20) + ggtitle("US regions by response")

p3 + geom_bar(position = "fill") + aes(fill = ppreg9) + ggtitle("Responses by US region")

# by state
p3 + geom_bar() + aes(PPSTATEN, fill = Q20) + coord_flip() + ggtitle("By state")

p3 + geom_bar(position = 'fill') + aes(PPSTATEN, fill = Q20) + coord_flip() + ggtitle("By state")

# by house type
p3 + geom_bar(position = 'fill') + aes(fill = PPHOUSE) + ggtitle("By house type")

p3 + geom_bar() + aes(fill = Q20) + facet_wrap(~PPHOUSE) + ggtitle("By house type")

p3 + geom_bar() + aes(PPHOUSE, fill = Q20) + ggtitle("By house type")

p3 + geom_bar(position = "fill") + aes(PPHOUSE, fill = Q20) + ggtitle("By house type")

# by housing status
p3 + geom_bar() + aes(fill = PPRENT) + ggtitle("By housing status")

p3 + geom_bar(position = 'fill') + aes(fill = PPRENT)

p3 + geom_bar() + aes(PPRENT, fill = Q20) + ggtitle("By housing status")

p3 + geom_bar(position = "fill") + aes(PPRENT, fill = Q20) + ggtitle("By housing status")

# by internet availability
p3 + geom_bar() + aes(fill = PPNET) + ggtitle("Internet status")

p3 + geom_bar(position = "fill") + aes(fill = PPNET) + ggtitle("Internet status")

p3 + geom_bar(position = "dodge") + aes(PPNET, fill = Q20) + ggtitle("Internet status")

p3 + geom_bar(position = "fill") + aes(PPNET, fill = Q20) + ggtitle("Internet status")