Monthly Kachemak Bay Report, June 2026

Authors
Affiliations

Martin Renner

RPI, under contract to NOAA/NCCOS Kasitsna Bay Lab

Kris Holderied

NOAA/NCCOS Kasitsna Bay Lab

Paul Cziko

NOAA/NCCOS Kasitsna Bay Lab

Summary

After an unusually cold spring, deep waters continued to be colder than normal, continuing a marine cold spell that began in December 2025. Surface waters, however, had warmed up beyond the seasonal mean, resulting in a temperature difference of over 7 °C between surface and deep waters in the inner bay. Chlorophyll concentrations were still low, but not as low as in May. Unusually low oxygen saturation levels appear to be due to an instrument malfunction.

A complete set of up-to-date graphs can be found on this Google Drive: section plots and time sections (request access from martin.renner@noaa.gov).

Conditions

After a cold spring, temperatures were back to the seasonal mean in the weeks leading up to this June survey (Figure 1). After an unusually wet May, precipitation in June 2026 was close to the long-term mean (which is usually the driest time of the year). None of the SNOTEL stations around Kachemak Bay reported a remaining snowpack since mid-May.

The May 2026 Kasitsna Bay Lab oceanographic survey was conducted by Hans, Kris and Martin in calm conditions.

Figure 1: Recent air temperatures on the Homer Spit, compared to the seasonal mean.

Physical oceanography

Temperature

Water temperatures during the June survey ranged from a minimum of 4.9 °C at station AlongBay-12 (69 m depth), in the inner bay, to a maximum of 12.7 °C at station AlongBay-11 (1 m depth) in the inner bay. Vertical stratification was pronounced in the inner bay, but was also evident in the outer bay, with a thin warm layer of fresher surface water layered over cooler, more saline mid/deep waters (Figure 2 (a), top-left panel). Mid- and deep outer bay waters tended to be warmer than inner bay waters, but no sharp horizontal front was observed.

(a) AlongBay Transect from Kachemak Bay entrance (left) to Bear Cove (right).
(b) T9 Transect, across bay from Homer Spit (left) to China Poot Bay (right).
Figure 2: Along-bay and cross-bay-sections of main parameters from the current cruise (left column) and their respective anomalies (right column), i.e. the difference between measurements on this cruise and the long-term monthly mean (2012-2025) at the respective place and depth.
Figure 3: Sea surface temperature in the Gulf of Alaska, based on satellite remote sensing data
Figure 4: Surface water temperatures (0-20 m) at station T9-6, off the Homer Spit, compared to the seasonal means

June satellite sea surface temperature data showed that as inner Kachemak Bay, upper Cook Inlet was also warmer than the cooler waters of lower Cook Inlet and the Gulf of Alaska (Figure 3). A large pocked of cool water from lower Cook Inlet to east of Kodiak Island was surrounded by warmer waters.

Throughout the bay, deep waters were still cooler than normal (by up to one standard deviation). In contrast, the thin surface layer in the inner bay was not only up to 7 °C warmer than bottom waters, it had also warmed up to a remarkable two standard deviations above the long-term mean for this month (Figure 2 (a), top-right panel). The marine cold spell of early 2026 appeared to have therefore ended for surface waters of Kachemak Bay (Figure 5, Figure 4), but was lingering in deep waters at a reduced scale (Figure 6). Surface waters of the Gulf of Alaska and Bering Sea also remained colder than normal in June 2026, as shown by satellite data, in contrast to warmer than normal conditions across much of the North Pacific (Figure 7).

Figure 5: Water temperature at the Homer Harbor SWMP station, operated by the KBNERR, at approximately 7 m depth (This is the deeper of two sensors, but is still located in the surface layer).
Figure 6: Recent bottom water temperatures in outer Kachemak Bay (station AlongBay-5, 172 m depth) compared to the long-term mean at this location.
Figure 7: Global sea surface temperature anomaly, based on satellite remote sensing.
Figure 8: Long-term temperature and salinity profiles at mid-bay (T9-6).

Salinity

Salinity values during the May survey ranged from 23.6 PSU at station AlongBay-13 (1m depth) in the inner bay to 31.5 PSU at station AlongBay-1 (56m depth) in the outer bay. A sharply demarcated layer of fresher water was present in the top 10-15 m in the inner and mid bay, and to a lesser degree in the outer bay (Figure 2). The layer of fresher water was thicker on the north than on the south side of the bay, indicative of the ant-clockwise current (Figure 2 (b)).Inner bay waters were fresher than outer bay waters at all depth, even though these differences were quite minor at depth (Figure 2 (a)).

Compared to the long-term means, most of Kachemak Bay was less saline than seasonally expected, reaching over 1.5 standard deviation in some places (Figure 2). This deviation was more pronounced in deep waters than in shallow waters, some of which showed slightly positive anomalies (Figure 2). Kachemak Bay has been fresher than normal for most of the past four years now (Figure 8, Figure 9).

Figure 9: Variability of deep-water salinity at station T9-6 off the Homer Spit, compared to the seasonal means.

Turbidity

Inner bay waters were more turbid than outer bay waters. Turbid waters extended from the inner bay into deep waters of the outer bay (Figure 2 (a)). Areas of higher surface turbidity were found in some areas of transient fresher surface water plumes, Compared to the seasonal mean, most waters were slightly less turbid than expected.

Biological conditions

Phytoplankton

Highest chlorophyll concentrations were found in outer bay at about 20 m depth (Figure 2 (a)). A subsurface band of elevated concentrations extended into the inner bay. Concentrations were below the seasonal mean in deep waters, but had areas above the expected mean in the active surface layer (Figure 2). Integrated over the entire water column, chlorophyll concentrations were higher than the extremely low concentrations in May, but remained low compared to the seasonal mean (Figure 10).

Oxygen

Inner bay and deep waters had lower oxygen saturations than outer bay and surface waters (Figure 2 (a)). Overall values were substantially lower than expected. The low values at the surface suggested that the instrument went out of calibration rather than an actual zone of depleted oxygen existing in the bay.

Figure 10: Trends and seasonal anomaly of chlorophyll concentrations at mid-bay station T9-6 (mean from surface to 85 m depth)

Wildlife

No marine mammals, other than sea otters were observed. Common murres and tufted puffins had returned in numbers to Gull Island and surrounding waters.

Mailing list

Please email Martin at martin.renner@noaa.gov if you would like to be added to or removed from this mailing list.

Appendix

Figure 11: Overview of sampling stations in Kachemak Bay