dplyr

dplyr adalah suatu package yang digunakan untuk data wrangling seperti transformasi dataframe, melakukan aggregate, menampilkan statistika deskriptif, menggabungkan dataframe, mengubah kolom dan baris, mengurutkan data, dan lain sebagainya

library(tidyverse)
## Warning: package 'tidyverse' was built under R version 4.5.3
## Warning: package 'ggplot2' was built under R version 4.5.3
## Warning: package 'tidyr' was built under R version 4.5.3
## Warning: package 'readr' was built under R version 4.5.3
## Warning: package 'purrr' was built under R version 4.5.3
## Warning: package 'dplyr' was built under R version 4.5.3
## Warning: package 'stringr' was built under R version 4.5.3
## Warning: package 'forcats' was built under R version 4.5.3
## Warning: package 'lubridate' was built under R version 4.5.3
## ── Attaching core tidyverse packages ──────────────────────── tidyverse 2.0.0 ──
## ✔ dplyr     1.2.1     ✔ readr     2.2.0
## ✔ forcats   1.0.1     ✔ stringr   1.6.0
## ✔ ggplot2   4.0.2     ✔ tibble    3.3.1
## ✔ lubridate 1.9.5     ✔ tidyr     1.3.2
## ✔ purrr     1.2.2     
## ── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
## ✖ dplyr::filter() masks stats::filter()
## ✖ dplyr::lag()    masks stats::lag()
## ℹ Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors

Persiapan File Data

# Menyimpan URL raw data GitHub ke dalam variabel
url <- "https://raw.githubusercontent.com/rfordatascience/tidytuesday/master/data/2020/2020-09-01/key_crop_yields.csv"

# Membaca data read_csv
df_crop <- read_csv(url)
## Rows: 13075 Columns: 14
## ── Column specification ────────────────────────────────────────────────────────
## Delimiter: ","
## chr  (2): Entity, Code
## dbl (12): Year, Wheat (tonnes per hectare), Rice (tonnes per hectare), Maize...
## 
## ℹ Use `spec()` to retrieve the full column specification for this data.
## ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.
# Melihat data
glimpse(df_crop)
## Rows: 13,075
## Columns: 14
## $ Entity                             <chr> "Afghanistan", "Afghanistan", "Afgh…
## $ Code                               <chr> "AFG", "AFG", "AFG", "AFG", "AFG", …
## $ Year                               <dbl> 1961, 1962, 1963, 1964, 1965, 1966,…
## $ `Wheat (tonnes per hectare)`       <dbl> 1.0220, 0.9735, 0.8317, 0.9510, 0.9…
## $ `Rice (tonnes per hectare)`        <dbl> 1.5190, 1.5190, 1.5190, 1.7273, 1.7…
## $ `Maize (tonnes per hectare)`       <dbl> 1.4000, 1.4000, 1.4260, 1.4257, 1.4…
## $ `Soybeans (tonnes per hectare)`    <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Potatoes (tonnes per hectare)`    <dbl> 8.6667, 7.6667, 8.1333, 8.6000, 8.8…
## $ `Beans (tonnes per hectare)`       <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Peas (tonnes per hectare)`        <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Cassava (tonnes per hectare)`     <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Barley (tonnes per hectare)`      <dbl> 1.0800, 1.0800, 1.0800, 1.0857, 1.0…
## $ `Cocoa beans (tonnes per hectare)` <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Bananas (tonnes per hectare)`     <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…

Mengubah semua kolom berkarakter (character) menjadi factor

df_crop$Entity <- as.factor(df_crop$Entity)
df_crop$Code <- as.factor(df_crop$Code)
#Periksa apakah ada perubahan
glimpse(df_crop)
## Rows: 13,075
## Columns: 14
## $ Entity                             <fct> "Afghanistan", "Afghanistan", "Afgh…
## $ Code                               <fct> AFG, AFG, AFG, AFG, AFG, AFG, AFG, …
## $ Year                               <dbl> 1961, 1962, 1963, 1964, 1965, 1966,…
## $ `Wheat (tonnes per hectare)`       <dbl> 1.0220, 0.9735, 0.8317, 0.9510, 0.9…
## $ `Rice (tonnes per hectare)`        <dbl> 1.5190, 1.5190, 1.5190, 1.7273, 1.7…
## $ `Maize (tonnes per hectare)`       <dbl> 1.4000, 1.4000, 1.4260, 1.4257, 1.4…
## $ `Soybeans (tonnes per hectare)`    <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Potatoes (tonnes per hectare)`    <dbl> 8.6667, 7.6667, 8.1333, 8.6000, 8.8…
## $ `Beans (tonnes per hectare)`       <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Peas (tonnes per hectare)`        <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Cassava (tonnes per hectare)`     <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Barley (tonnes per hectare)`      <dbl> 1.0800, 1.0800, 1.0800, 1.0857, 1.0…
## $ `Cocoa beans (tonnes per hectare)` <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…
## $ `Bananas (tonnes per hectare)`     <dbl> NA, NA, NA, NA, NA, NA, NA, NA, NA,…

Select

Select adalah fungsi yang digunakan untuk memilih kolom dari suatu dataframe.

data_select <- select(df_crop, Entity, Year, `Wheat (tonnes per hectare)`)
data_select
## # A tibble: 13,075 × 3
##    Entity       Year `Wheat (tonnes per hectare)`
##    <fct>       <dbl>                        <dbl>
##  1 Afghanistan  1961                        1.02 
##  2 Afghanistan  1962                        0.974
##  3 Afghanistan  1963                        0.832
##  4 Afghanistan  1964                        0.951
##  5 Afghanistan  1965                        0.972
##  6 Afghanistan  1966                        0.867
##  7 Afghanistan  1967                        1.12 
##  8 Afghanistan  1968                        1.16 
##  9 Afghanistan  1969                        1.19 
## 10 Afghanistan  1970                        0.956
## # ℹ 13,065 more rows

Memilih beberapa kolom pertama

select(df_crop, 1:4)
## # A tibble: 13,075 × 4
##    Entity      Code   Year `Wheat (tonnes per hectare)`
##    <fct>       <fct> <dbl>                        <dbl>
##  1 Afghanistan AFG    1961                        1.02 
##  2 Afghanistan AFG    1962                        0.974
##  3 Afghanistan AFG    1963                        0.832
##  4 Afghanistan AFG    1964                        0.951
##  5 Afghanistan AFG    1965                        0.972
##  6 Afghanistan AFG    1966                        0.867
##  7 Afghanistan AFG    1967                        1.12 
##  8 Afghanistan AFG    1968                        1.16 
##  9 Afghanistan AFG    1969                        1.19 
## 10 Afghanistan AFG    1970                        0.956
## # ℹ 13,065 more rows

Mengecualikan kolom

select(df_crop, -c(`Entity`, `Year`))
## # A tibble: 13,075 × 12
##    Code  Wheat (tonnes per hecta…¹ Rice (tonnes per hec…² Maize (tonnes per he…³
##    <fct>                     <dbl>                  <dbl>                  <dbl>
##  1 AFG                       1.02                    1.52                   1.4 
##  2 AFG                       0.974                   1.52                   1.4 
##  3 AFG                       0.832                   1.52                   1.43
##  4 AFG                       0.951                   1.73                   1.43
##  5 AFG                       0.972                   1.73                   1.44
##  6 AFG                       0.867                   1.52                   1.44
##  7 AFG                       1.12                    1.92                   1.41
##  8 AFG                       1.16                    1.95                   1.71
##  9 AFG                       1.19                    1.98                   1.72
## 10 AFG                       0.956                   1.81                   1.48
## # ℹ 13,065 more rows
## # ℹ abbreviated names: ¹​`Wheat (tonnes per hectare)`,
## #   ²​`Rice (tonnes per hectare)`, ³​`Maize (tonnes per hectare)`
## # ℹ 8 more variables: `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>,
## #   `Barley (tonnes per hectare)` <dbl>, …

Memilih kolom yang mengandung teks

select(df_crop, contains("(tonnes per hectare)"))
## # A tibble: 13,075 × 11
##    `Wheat (tonnes per hectare)` Rice (tonnes per hectar…¹ Maize (tonnes per he…²
##                           <dbl>                     <dbl>                  <dbl>
##  1                        1.02                       1.52                   1.4 
##  2                        0.974                      1.52                   1.4 
##  3                        0.832                      1.52                   1.43
##  4                        0.951                      1.73                   1.43
##  5                        0.972                      1.73                   1.44
##  6                        0.867                      1.52                   1.44
##  7                        1.12                       1.92                   1.41
##  8                        1.16                       1.95                   1.71
##  9                        1.19                       1.98                   1.72
## 10                        0.956                      1.81                   1.48
## # ℹ 13,065 more rows
## # ℹ abbreviated names: ¹​`Rice (tonnes per hectare)`,
## #   ²​`Maize (tonnes per hectare)`
## # ℹ 8 more variables: `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>,
## #   `Barley (tonnes per hectare)` <dbl>, …

##Operator Pipe %>% Operator Pipe adalah fitur yang memungkinkan mengalirkan data atau hasil dari satu fungsi secara langsung ke fungsi berikutnya. Pipe secara bahasa sebagai padanan kata “dan kemudian” dalam alur logika kode.

#tidak perlu lagi menyebut nama data di dalam select
#data df_crop dan kemudian dipilih 1-3 kolom pertama dan kemudian dipilih yang bertipe numerik 
df_crop %>% select(1:3) %>% select(where(is.numeric)) 
## # A tibble: 13,075 × 1
##     Year
##    <dbl>
##  1  1961
##  2  1962
##  3  1963
##  4  1964
##  5  1965
##  6  1966
##  7  1967
##  8  1968
##  9  1969
## 10  1970
## # ℹ 13,065 more rows

##Filter filter adalah fungsi yang digunakan untuk memilih baris sesuai dengan kriteria tertentu.

#data_filter berisi data yang telah disaring untuk Entity dari Indonesia
data_filter<-filter(df_crop, Entity=="Indonesia")
data_filter
## # A tibble: 58 × 14
##    Entity    Code   Year `Wheat (tonnes per hectare)` Rice (tonnes per hectare…¹
##    <fct>     <fct> <dbl>                        <dbl>                      <dbl>
##  1 Indonesia IDN    1961                           NA                       1.76
##  2 Indonesia IDN    1962                           NA                       1.79
##  3 Indonesia IDN    1963                           NA                       1.72
##  4 Indonesia IDN    1964                           NA                       1.76
##  5 Indonesia IDN    1965                           NA                       1.77
##  6 Indonesia IDN    1966                           NA                       1.77
##  7 Indonesia IDN    1967                           NA                       1.76
##  8 Indonesia IDN    1968                           NA                       2.14
##  9 Indonesia IDN    1969                           NA                       2.25
## 10 Indonesia IDN    1970                           NA                       2.38
## # ℹ 48 more rows
## # ℹ abbreviated name: ¹​`Rice (tonnes per hectare)`
## # ℹ 9 more variables: `Maize (tonnes per hectare)` <dbl>,
## #   `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>,
## #   `Barley (tonnes per hectare)` <dbl>, …

Menyaring suatu kolom tanpa nilai NA

filter(df_crop, !is.na(`Wheat (tonnes per hectare)`))
## # A tibble: 8,101 × 14
##    Entity      Code   Year `Wheat (tonnes per hectare)` Rice (tonnes per hecta…¹
##    <fct>       <fct> <dbl>                        <dbl>                    <dbl>
##  1 Afghanistan AFG    1961                        1.02                      1.52
##  2 Afghanistan AFG    1962                        0.974                     1.52
##  3 Afghanistan AFG    1963                        0.832                     1.52
##  4 Afghanistan AFG    1964                        0.951                     1.73
##  5 Afghanistan AFG    1965                        0.972                     1.73
##  6 Afghanistan AFG    1966                        0.867                     1.52
##  7 Afghanistan AFG    1967                        1.12                      1.92
##  8 Afghanistan AFG    1968                        1.16                      1.95
##  9 Afghanistan AFG    1969                        1.19                      1.98
## 10 Afghanistan AFG    1970                        0.956                     1.81
## # ℹ 8,091 more rows
## # ℹ abbreviated name: ¹​`Rice (tonnes per hectare)`
## # ℹ 9 more variables: `Maize (tonnes per hectare)` <dbl>,
## #   `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>,
## #   `Barley (tonnes per hectare)` <dbl>, …

Menyaring lebih dari satu kondisi

filter(df_crop,Code=="IDN" , Year > 2000, `Bananas (tonnes per hectare)` <50 )
## # A tibble: 1 × 14
##   Entity    Code   Year `Wheat (tonnes per hectare)` `Rice (tonnes per hectare)`
##   <fct>     <fct> <dbl>                        <dbl>                       <dbl>
## 1 Indonesia IDN    2003                           NA                        4.54
## # ℹ 9 more variables: `Maize (tonnes per hectare)` <dbl>,
## #   `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>,
## #   `Barley (tonnes per hectare)` <dbl>,
## #   `Cocoa beans (tonnes per hectare)` <dbl>,
## #   `Bananas (tonnes per hectare)` <dbl>

##Arrange arrange adalah fungsi yang digunakan untuk mengurutkan data. Gunakan desc untuk mengurutkan secara menurun.

#mengurutkan data berdasarkan Year secara menaik dan annual salary menurun 
arrange(df_crop, Year, desc(`Rice (tonnes per hectare)`))
## # A tibble: 13,075 × 14
##    Entity              Code   Year Wheat (tonnes per he…¹ Rice (tonnes per hec…²
##    <fct>               <fct> <dbl>                  <dbl>                  <dbl>
##  1 Puerto Rico         PRI    1961                 NA                       6.44
##  2 Spain               ESP    1961                  0.884                   6.36
##  3 Australia           AUS    1961                  1.13                    5.9 
##  4 Australia & New Ze… <NA>   1961                  1.16                    5.9 
##  5 Italy               ITA    1961                  1.91                    5.68
##  6 Southern Europe     <NA>   1961                  1.40                    5.42
##  7 Egypt               EGY    1961                  2.47                    5.05
##  8 Northern Africa     <NA>   1961                  0.696                   4.98
##  9 European Union      <NA>   1961                  1.86                    4.95
## 10 Japan               JPN    1961                  2.75                    4.88
## # ℹ 13,065 more rows
## # ℹ abbreviated names: ¹​`Wheat (tonnes per hectare)`,
## #   ²​`Rice (tonnes per hectare)`
## # ℹ 9 more variables: `Maize (tonnes per hectare)` <dbl>,
## #   `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>, …

##Mutate mutate adalah fungsi yang digunakan untuk membuat kolom atau variabel baru.

#Menghasilkan kolom baru bernama Wheat (kg per hectare)
mutate(df_crop, `Wheat (kg per hectare)` = `Wheat (tonnes per hectare)` * 1000)
## # A tibble: 13,075 × 15
##    Entity      Code   Year `Wheat (tonnes per hectare)` Rice (tonnes per hecta…¹
##    <fct>       <fct> <dbl>                        <dbl>                    <dbl>
##  1 Afghanistan AFG    1961                        1.02                      1.52
##  2 Afghanistan AFG    1962                        0.974                     1.52
##  3 Afghanistan AFG    1963                        0.832                     1.52
##  4 Afghanistan AFG    1964                        0.951                     1.73
##  5 Afghanistan AFG    1965                        0.972                     1.73
##  6 Afghanistan AFG    1966                        0.867                     1.52
##  7 Afghanistan AFG    1967                        1.12                      1.92
##  8 Afghanistan AFG    1968                        1.16                      1.95
##  9 Afghanistan AFG    1969                        1.19                      1.98
## 10 Afghanistan AFG    1970                        0.956                     1.81
## # ℹ 13,065 more rows
## # ℹ abbreviated name: ¹​`Rice (tonnes per hectare)`
## # ℹ 10 more variables: `Maize (tonnes per hectare)` <dbl>,
## #   `Soybeans (tonnes per hectare)` <dbl>,
## #   `Potatoes (tonnes per hectare)` <dbl>, `Beans (tonnes per hectare)` <dbl>,
## #   `Peas (tonnes per hectare)` <dbl>, `Cassava (tonnes per hectare)` <dbl>,
## #   `Barley (tonnes per hectare)` <dbl>, …

Kolom baru dengan kondisi

df_crop %>% 
  mutate(Wheat_Status = ifelse(`Wheat (tonnes per hectare)` > 1, "Lebih dari 1", "Kurang dari 1")) %>% select(Code,Year,Wheat_Status)
## # A tibble: 13,075 × 3
##    Code   Year Wheat_Status 
##    <fct> <dbl> <chr>        
##  1 AFG    1961 Lebih dari 1 
##  2 AFG    1962 Kurang dari 1
##  3 AFG    1963 Kurang dari 1
##  4 AFG    1964 Kurang dari 1
##  5 AFG    1965 Kurang dari 1
##  6 AFG    1966 Kurang dari 1
##  7 AFG    1967 Lebih dari 1 
##  8 AFG    1968 Lebih dari 1 
##  9 AFG    1969 Lebih dari 1 
## 10 AFG    1970 Kurang dari 1
## # ℹ 13,065 more rows

##Summarise summarise adalah fungsi yang digunakan untuk melakukan statistika deskriptif.

#ada dua summarise yang ingin dihasilkan
#gunakan na.rm = TRUE untuk meremove atau membuang nilai yang hilang
df_sum <- summarise(df_crop, 
                    `maksimum Wheat` = max(`Wheat (tonnes per hectare)`, na.rm = TRUE), 
                    `maksimum Rice` = max(`Rice (tonnes per hectare)`, na.rm = TRUE))
df_sum
## # A tibble: 1 × 2
##   `maksimum Wheat` `maksimum Rice`
##              <dbl>           <dbl>
## 1             10.7            10.7

##Group by Group by mengelompokan data dan menyimpulkannya. Untuk mengeksplorasi lebih lanjut, dapat ditambahkan fungsi fungsi lain.

#Memilih beberapa kolom awal, Mengelompokkan, kemudian menghitung rata rata, menyaring yang tidak kosong, menambahkan kolom baru, mengurutkan 
df_crop %>% 
  select(1:4) %>%
  group_by(Code) %>% 
  summarise(`Mean Wheat (tonnes per hectare)` = mean(`Wheat (tonnes per hectare)`)) %>%
  filter(!is.na(`Mean Wheat (tonnes per hectare)`))  %>%
  mutate(`Mean Wheat (kg per hectare)` = `Mean Wheat (tonnes per hectare)` * 1000) %>%
  arrange(desc(`Mean Wheat (kg per hectare)`))
## # A tibble: 118 × 3
##    Code  `Mean Wheat (tonnes per hectare)` `Mean Wheat (kg per hectare)`
##    <fct>                             <dbl>                         <dbl>
##  1 BEL                                8.54                         8544.
##  2 NLD                                7.03                         7030.
##  3 IRL                                6.83                         6830.
##  4 GBR                                6.37                         6366.
##  5 DNK                                6.18                         6175.
##  6 LUX                                5.98                         5977.
##  7 DEU                                5.89                         5894.
##  8 FRA                                5.65                         5645.
##  9 NZL                                5.36                         5358.
## 10 SWE                                5.18                         5179.
## # ℹ 108 more rows