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The following beta regressions predict prevalence with random intercepts per participant and per test feature.
# condition
glmmTMB(prevalence ~ condition + (1|participant) + (1|test_feature),
data = data_tidy,
family = beta_family(link = "logit")) %>%
Anova()
## Analysis of Deviance Table (Type II Wald chisquare tests)
##
## Response: prevalence
## Chisq Df Pr(>Chisq)
## condition 21.437 4 0.0002593 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
- Across all conditions, there is a main effect of condition (\(\chi\)(4)=21.44, p<.001) on the inferred prevalence of novel features.
# condition
glmmTMB(prevalence ~ condition + (1|participant) + (1|test_feature),
data = data_tidy %>%
filter(condition != "baseline"),
family = beta_family(link = "logit")) %>%
Anova()
## Analysis of Deviance Table (Type II Wald chisquare tests)
##
## Response: prevalence
## Chisq Df Pr(>Chisq)
## condition 19.573 3 0.0002081 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
- Across the 4/n conditions (excludes baseline), there is a main effect of condition (\(\chi\)(3)=19.57, p<.001) on the inferred prevalence of novel features.
# proportion of generics
glmmTMB(prevalence ~ prop_generics + (1|participant) + (1|test_feature),
data = data_tidy,
family = beta_family(link = "logit")) %>%
summary()
## Family: beta ( logit )
## Formula:
## prevalence ~ prop_generics + (1 | participant) + (1 | test_feature)
## Data: data_tidy
##
## AIC BIC logLik -2*log(L) df.resid
## -3689.8 -3657.0 1849.9 -3699.8 5210
##
## Random effects:
##
## Conditional model:
## Groups Name Variance Std.Dev.
## participant (Intercept) 0.7395 0.8600
## test_feature (Intercept) 0.1829 0.4277
## Number of obs: 5215, groups: participant, 326; test_feature, 16
##
## Dispersion parameter for beta family (): 2.61
##
## Conditional model:
## Estimate Std. Error z value Pr(>|z|)
## (Intercept) -0.7264 0.1480 -4.908 0.000000921 ***
## prop_generics 0.6956 0.1703 4.085 0.000044047 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
- Across all conditions, proportion of generics to specifics (z = 4.09, p < .001) predicted the inferred prevalence of novel features.
# proportion of generics
glmmTMB(prevalence ~ prop_generics + (1|participant) + (1|test_feature),
data = data_tidy %>%
filter(condition != "baseline"),
family = beta_family(link = "logit")) %>%
summary()
## Family: beta ( logit )
## Formula:
## prevalence ~ prop_generics + (1 | participant) + (1 | test_feature)
## Data: data_tidy %>% filter(condition != "baseline")
##
## AIC BIC logLik -2*log(L) df.resid
## -3689.8 -3657.0 1849.9 -3699.8 5210
##
## Random effects:
##
## Conditional model:
## Groups Name Variance Std.Dev.
## participant (Intercept) 0.7395 0.8600
## test_feature (Intercept) 0.1829 0.4277
## Number of obs: 5215, groups: participant, 326; test_feature, 16
##
## Dispersion parameter for beta family (): 2.61
##
## Conditional model:
## Estimate Std. Error z value Pr(>|z|)
## (Intercept) -0.7264 0.1480 -4.908 0.000000921 ***
## prop_generics 0.6956 0.1703 4.085 0.000044047 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
- Across the 4/n conditions (excludes baseline), proportion of generics to specifics (z = 4.09, p < .001) predicted the inferred prevalence of novel features.