PROGRAM 2

Author

PRACHETAN MS

Write an R script to create a scatter plot, incorporating categorical analysis through color -coded data points representing different groups using ggplot2.

STEP 1: Load libraries

we load two libraries: - ggplot2 is used to build plots layer by layer (we will use it to create the scatter plot). - dplyr provides functions for exploring and summarizing data. ( we will use it to understand the categories in the dataset).

library(ggplot2)
library(dplyr)

Attaching package: 'dplyr'
The following objects are masked from 'package:stats':

    filter, lag
The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

STEP 2: Load dataset (iris)

we use the built-in dataset iris.

What this dataset contains:

  • Each row is one flower sample (an observation).

  • There are 150 total observations. -The column Species is a categorical variable with 3 groups:

  • setosa

  • versicolor

  • `virginica`
  • The column Sepal.Length and Sepal.Width are numeric measurements that we will plot.

data <- iris

STEP 3:

head(data,10)
   Sepal.Length Sepal.Width Petal.Length Petal.Width Species
1           5.1         3.5          1.4         0.2  setosa
2           4.9         3.0          1.4         0.2  setosa
3           4.7         3.2          1.3         0.2  setosa
4           4.6         3.1          1.5         0.2  setosa
5           5.0         3.6          1.4         0.2  setosa
6           5.4         3.9          1.7         0.4  setosa
7           4.6         3.4          1.4         0.3  setosa
8           5.0         3.4          1.5         0.2  setosa
9           4.4         2.9          1.4         0.2  setosa
10          4.9         3.1          1.5         0.1  setosa
tail(data,10)
    Sepal.Length Sepal.Width Petal.Length Petal.Width   Species
141          6.7         3.1          5.6         2.4 virginica
142          6.9         3.1          5.1         2.3 virginica
143          5.8         2.7          5.1         1.9 virginica
144          6.8         3.2          5.9         2.3 virginica
145          6.7         3.3          5.7         2.5 virginica
146          6.7         3.0          5.2         2.3 virginica
147          6.3         2.5          5.0         1.9 virginica
148          6.5         3.0          5.2         2.0 virginica
149          6.2         3.4          5.4         2.3 virginica
150          5.9         3.0          5.1         1.8 virginica
str(data)
'data.frame':   150 obs. of  5 variables:
 $ Sepal.Length: num  5.1 4.9 4.7 4.6 5 5.4 4.6 5 4.4 4.9 ...
 $ Sepal.Width : num  3.5 3 3.2 3.1 3.6 3.9 3.4 3.4 2.9 3.1 ...
 $ Petal.Length: num  1.4 1.4 1.3 1.5 1.4 1.7 1.4 1.5 1.4 1.5 ...
 $ Petal.Width : num  0.2 0.2 0.2 0.2 0.2 0.4 0.3 0.2 0.2 0.1 ...
 $ Species     : Factor w/ 3 levels "setosa","versicolor",..: 1 1 1 1 1 1 1 1 1 1 ...
summary(data)
  Sepal.Length    Sepal.Width     Petal.Length    Petal.Width   
 Min.   :4.300   Min.   :2.000   Min.   :1.000   Min.   :0.100  
 1st Qu.:5.100   1st Qu.:2.800   1st Qu.:1.600   1st Qu.:0.300  
 Median :5.800   Median :3.000   Median :4.350   Median :1.300  
 Mean   :5.843   Mean   :3.057   Mean   :3.758   Mean   :1.199  
 3rd Qu.:6.400   3rd Qu.:3.300   3rd Qu.:5.100   3rd Qu.:1.800  
 Max.   :7.900   Max.   :4.400   Max.   :6.900   Max.   :2.500  
       Species  
 setosa    :50  
 versicolor:50  
 virginica :50  
                
                
                
names(data)
[1] "Sepal.Length" "Sepal.Width"  "Petal.Length" "Petal.Width"  "Species"     
dim(data)
[1] 150   5
data[1]
    Sepal.Length
1            5.1
2            4.9
3            4.7
4            4.6
5            5.0
6            5.4
7            4.6
8            5.0
9            4.4
10           4.9
11           5.4
12           4.8
13           4.8
14           4.3
15           5.8
16           5.7
17           5.4
18           5.1
19           5.7
20           5.1
21           5.4
22           5.1
23           4.6
24           5.1
25           4.8
26           5.0
27           5.0
28           5.2
29           5.2
30           4.7
31           4.8
32           5.4
33           5.2
34           5.5
35           4.9
36           5.0
37           5.5
38           4.9
39           4.4
40           5.1
41           5.0
42           4.5
43           4.4
44           5.0
45           5.1
46           4.8
47           5.1
48           4.6
49           5.3
50           5.0
51           7.0
52           6.4
53           6.9
54           5.5
55           6.5
56           5.7
57           6.3
58           4.9
59           6.6
60           5.2
61           5.0
62           5.9
63           6.0
64           6.1
65           5.6
66           6.7
67           5.6
68           5.8
69           6.2
70           5.6
71           5.9
72           6.1
73           6.3
74           6.1
75           6.4
76           6.6
77           6.8
78           6.7
79           6.0
80           5.7
81           5.5
82           5.5
83           5.8
84           6.0
85           5.4
86           6.0
87           6.7
88           6.3
89           5.6
90           5.5
91           5.5
92           6.1
93           5.8
94           5.0
95           5.6
96           5.7
97           5.7
98           6.2
99           5.1
100          5.7
101          6.3
102          5.8
103          7.1
104          6.3
105          6.5
106          7.6
107          4.9
108          7.3
109          6.7
110          7.2
111          6.5
112          6.4
113          6.8
114          5.7
115          5.8
116          6.4
117          6.5
118          7.7
119          7.7
120          6.0
121          6.9
122          5.6
123          7.7
124          6.3
125          6.7
126          7.2
127          6.2
128          6.1
129          6.4
130          7.2
131          7.4
132          7.9
133          6.4
134          6.3
135          6.1
136          7.7
137          6.3
138          6.4
139          6.0
140          6.9
141          6.7
142          6.9
143          5.8
144          6.8
145          6.7
146          6.7
147          6.3
148          6.5
149          6.2
150          5.9
data$Sepal.Length
  [1] 5.1 4.9 4.7 4.6 5.0 5.4 4.6 5.0 4.4 4.9 5.4 4.8 4.8 4.3 5.8 5.7 5.4 5.1
 [19] 5.7 5.1 5.4 5.1 4.6 5.1 4.8 5.0 5.0 5.2 5.2 4.7 4.8 5.4 5.2 5.5 4.9 5.0
 [37] 5.5 4.9 4.4 5.1 5.0 4.5 4.4 5.0 5.1 4.8 5.1 4.6 5.3 5.0 7.0 6.4 6.9 5.5
 [55] 6.5 5.7 6.3 4.9 6.6 5.2 5.0 5.9 6.0 6.1 5.6 6.7 5.6 5.8 6.2 5.6 5.9 6.1
 [73] 6.3 6.1 6.4 6.6 6.8 6.7 6.0 5.7 5.5 5.5 5.8 6.0 5.4 6.0 6.7 6.3 5.6 5.5
 [91] 5.5 6.1 5.8 5.0 5.6 5.7 5.7 6.2 5.1 5.7 6.3 5.8 7.1 6.3 6.5 7.6 4.9 7.3
[109] 6.7 7.2 6.5 6.4 6.8 5.7 5.8 6.4 6.5 7.7 7.7 6.0 6.9 5.6 7.7 6.3 6.7 7.2
[127] 6.2 6.1 6.4 7.2 7.4 7.9 6.4 6.3 6.1 7.7 6.3 6.4 6.0 6.9 6.7 6.9 5.8 6.8
[145] 6.7 6.7 6.3 6.5 6.2 5.9
typeof(data$Sepal.Length)
[1] "double"
typeof(data[1])
[1] "list"
data[][1]
    Sepal.Length
1            5.1
2            4.9
3            4.7
4            4.6
5            5.0
6            5.4
7            4.6
8            5.0
9            4.4
10           4.9
11           5.4
12           4.8
13           4.8
14           4.3
15           5.8
16           5.7
17           5.4
18           5.1
19           5.7
20           5.1
21           5.4
22           5.1
23           4.6
24           5.1
25           4.8
26           5.0
27           5.0
28           5.2
29           5.2
30           4.7
31           4.8
32           5.4
33           5.2
34           5.5
35           4.9
36           5.0
37           5.5
38           4.9
39           4.4
40           5.1
41           5.0
42           4.5
43           4.4
44           5.0
45           5.1
46           4.8
47           5.1
48           4.6
49           5.3
50           5.0
51           7.0
52           6.4
53           6.9
54           5.5
55           6.5
56           5.7
57           6.3
58           4.9
59           6.6
60           5.2
61           5.0
62           5.9
63           6.0
64           6.1
65           5.6
66           6.7
67           5.6
68           5.8
69           6.2
70           5.6
71           5.9
72           6.1
73           6.3
74           6.1
75           6.4
76           6.6
77           6.8
78           6.7
79           6.0
80           5.7
81           5.5
82           5.5
83           5.8
84           6.0
85           5.4
86           6.0
87           6.7
88           6.3
89           5.6
90           5.5
91           5.5
92           6.1
93           5.8
94           5.0
95           5.6
96           5.7
97           5.7
98           6.2
99           5.1
100          5.7
101          6.3
102          5.8
103          7.1
104          6.3
105          6.5
106          7.6
107          4.9
108          7.3
109          6.7
110          7.2
111          6.5
112          6.4
113          6.8
114          5.7
115          5.8
116          6.4
117          6.5
118          7.7
119          7.7
120          6.0
121          6.9
122          5.6
123          7.7
124          6.3
125          6.7
126          7.2
127          6.2
128          6.1
129          6.4
130          7.2
131          7.4
132          7.9
133          6.4
134          6.3
135          6.1
136          7.7
137          6.3
138          6.4
139          6.0
140          6.9
141          6.7
142          6.9
143          5.8
144          6.8
145          6.7
146          6.7
147          6.3
148          6.5
149          6.2
150          5.9
data[2][]
    Sepal.Width
1           3.5
2           3.0
3           3.2
4           3.1
5           3.6
6           3.9
7           3.4
8           3.4
9           2.9
10          3.1
11          3.7
12          3.4
13          3.0
14          3.0
15          4.0
16          4.4
17          3.9
18          3.5
19          3.8
20          3.8
21          3.4
22          3.7
23          3.6
24          3.3
25          3.4
26          3.0
27          3.4
28          3.5
29          3.4
30          3.2
31          3.1
32          3.4
33          4.1
34          4.2
35          3.1
36          3.2
37          3.5
38          3.6
39          3.0
40          3.4
41          3.5
42          2.3
43          3.2
44          3.5
45          3.8
46          3.0
47          3.8
48          3.2
49          3.7
50          3.3
51          3.2
52          3.2
53          3.1
54          2.3
55          2.8
56          2.8
57          3.3
58          2.4
59          2.9
60          2.7
61          2.0
62          3.0
63          2.2
64          2.9
65          2.9
66          3.1
67          3.0
68          2.7
69          2.2
70          2.5
71          3.2
72          2.8
73          2.5
74          2.8
75          2.9
76          3.0
77          2.8
78          3.0
79          2.9
80          2.6
81          2.4
82          2.4
83          2.7
84          2.7
85          3.0
86          3.4
87          3.1
88          2.3
89          3.0
90          2.5
91          2.6
92          3.0
93          2.6
94          2.3
95          2.7
96          3.0
97          2.9
98          2.9
99          2.5
100         2.8
101         3.3
102         2.7
103         3.0
104         2.9
105         3.0
106         3.0
107         2.5
108         2.9
109         2.5
110         3.6
111         3.2
112         2.7
113         3.0
114         2.5
115         2.8
116         3.2
117         3.0
118         3.8
119         2.6
120         2.2
121         3.2
122         2.8
123         2.8
124         2.7
125         3.3
126         3.2
127         2.8
128         3.0
129         2.8
130         3.0
131         2.8
132         3.8
133         2.8
134         2.8
135         2.6
136         3.0
137         3.4
138         3.1
139         3.0
140         3.1
141         3.1
142         3.1
143         2.7
144         3.2
145         3.3
146         3.0
147         2.5
148         3.0
149         3.4
150         3.0
data[1:150,1:5]
    Sepal.Length Sepal.Width Petal.Length Petal.Width    Species
1            5.1         3.5          1.4         0.2     setosa
2            4.9         3.0          1.4         0.2     setosa
3            4.7         3.2          1.3         0.2     setosa
4            4.6         3.1          1.5         0.2     setosa
5            5.0         3.6          1.4         0.2     setosa
6            5.4         3.9          1.7         0.4     setosa
7            4.6         3.4          1.4         0.3     setosa
8            5.0         3.4          1.5         0.2     setosa
9            4.4         2.9          1.4         0.2     setosa
10           4.9         3.1          1.5         0.1     setosa
11           5.4         3.7          1.5         0.2     setosa
12           4.8         3.4          1.6         0.2     setosa
13           4.8         3.0          1.4         0.1     setosa
14           4.3         3.0          1.1         0.1     setosa
15           5.8         4.0          1.2         0.2     setosa
16           5.7         4.4          1.5         0.4     setosa
17           5.4         3.9          1.3         0.4     setosa
18           5.1         3.5          1.4         0.3     setosa
19           5.7         3.8          1.7         0.3     setosa
20           5.1         3.8          1.5         0.3     setosa
21           5.4         3.4          1.7         0.2     setosa
22           5.1         3.7          1.5         0.4     setosa
23           4.6         3.6          1.0         0.2     setosa
24           5.1         3.3          1.7         0.5     setosa
25           4.8         3.4          1.9         0.2     setosa
26           5.0         3.0          1.6         0.2     setosa
27           5.0         3.4          1.6         0.4     setosa
28           5.2         3.5          1.5         0.2     setosa
29           5.2         3.4          1.4         0.2     setosa
30           4.7         3.2          1.6         0.2     setosa
31           4.8         3.1          1.6         0.2     setosa
32           5.4         3.4          1.5         0.4     setosa
33           5.2         4.1          1.5         0.1     setosa
34           5.5         4.2          1.4         0.2     setosa
35           4.9         3.1          1.5         0.2     setosa
36           5.0         3.2          1.2         0.2     setosa
37           5.5         3.5          1.3         0.2     setosa
38           4.9         3.6          1.4         0.1     setosa
39           4.4         3.0          1.3         0.2     setosa
40           5.1         3.4          1.5         0.2     setosa
41           5.0         3.5          1.3         0.3     setosa
42           4.5         2.3          1.3         0.3     setosa
43           4.4         3.2          1.3         0.2     setosa
44           5.0         3.5          1.6         0.6     setosa
45           5.1         3.8          1.9         0.4     setosa
46           4.8         3.0          1.4         0.3     setosa
47           5.1         3.8          1.6         0.2     setosa
48           4.6         3.2          1.4         0.2     setosa
49           5.3         3.7          1.5         0.2     setosa
50           5.0         3.3          1.4         0.2     setosa
51           7.0         3.2          4.7         1.4 versicolor
52           6.4         3.2          4.5         1.5 versicolor
53           6.9         3.1          4.9         1.5 versicolor
54           5.5         2.3          4.0         1.3 versicolor
55           6.5         2.8          4.6         1.5 versicolor
56           5.7         2.8          4.5         1.3 versicolor
57           6.3         3.3          4.7         1.6 versicolor
58           4.9         2.4          3.3         1.0 versicolor
59           6.6         2.9          4.6         1.3 versicolor
60           5.2         2.7          3.9         1.4 versicolor
61           5.0         2.0          3.5         1.0 versicolor
62           5.9         3.0          4.2         1.5 versicolor
63           6.0         2.2          4.0         1.0 versicolor
64           6.1         2.9          4.7         1.4 versicolor
65           5.6         2.9          3.6         1.3 versicolor
66           6.7         3.1          4.4         1.4 versicolor
67           5.6         3.0          4.5         1.5 versicolor
68           5.8         2.7          4.1         1.0 versicolor
69           6.2         2.2          4.5         1.5 versicolor
70           5.6         2.5          3.9         1.1 versicolor
71           5.9         3.2          4.8         1.8 versicolor
72           6.1         2.8          4.0         1.3 versicolor
73           6.3         2.5          4.9         1.5 versicolor
74           6.1         2.8          4.7         1.2 versicolor
75           6.4         2.9          4.3         1.3 versicolor
76           6.6         3.0          4.4         1.4 versicolor
77           6.8         2.8          4.8         1.4 versicolor
78           6.7         3.0          5.0         1.7 versicolor
79           6.0         2.9          4.5         1.5 versicolor
80           5.7         2.6          3.5         1.0 versicolor
81           5.5         2.4          3.8         1.1 versicolor
82           5.5         2.4          3.7         1.0 versicolor
83           5.8         2.7          3.9         1.2 versicolor
84           6.0         2.7          5.1         1.6 versicolor
85           5.4         3.0          4.5         1.5 versicolor
86           6.0         3.4          4.5         1.6 versicolor
87           6.7         3.1          4.7         1.5 versicolor
88           6.3         2.3          4.4         1.3 versicolor
89           5.6         3.0          4.1         1.3 versicolor
90           5.5         2.5          4.0         1.3 versicolor
91           5.5         2.6          4.4         1.2 versicolor
92           6.1         3.0          4.6         1.4 versicolor
93           5.8         2.6          4.0         1.2 versicolor
94           5.0         2.3          3.3         1.0 versicolor
95           5.6         2.7          4.2         1.3 versicolor
96           5.7         3.0          4.2         1.2 versicolor
97           5.7         2.9          4.2         1.3 versicolor
98           6.2         2.9          4.3         1.3 versicolor
99           5.1         2.5          3.0         1.1 versicolor
100          5.7         2.8          4.1         1.3 versicolor
101          6.3         3.3          6.0         2.5  virginica
102          5.8         2.7          5.1         1.9  virginica
103          7.1         3.0          5.9         2.1  virginica
104          6.3         2.9          5.6         1.8  virginica
105          6.5         3.0          5.8         2.2  virginica
106          7.6         3.0          6.6         2.1  virginica
107          4.9         2.5          4.5         1.7  virginica
108          7.3         2.9          6.3         1.8  virginica
109          6.7         2.5          5.8         1.8  virginica
110          7.2         3.6          6.1         2.5  virginica
111          6.5         3.2          5.1         2.0  virginica
112          6.4         2.7          5.3         1.9  virginica
113          6.8         3.0          5.5         2.1  virginica
114          5.7         2.5          5.0         2.0  virginica
115          5.8         2.8          5.1         2.4  virginica
116          6.4         3.2          5.3         2.3  virginica
117          6.5         3.0          5.5         1.8  virginica
118          7.7         3.8          6.7         2.2  virginica
119          7.7         2.6          6.9         2.3  virginica
120          6.0         2.2          5.0         1.5  virginica
121          6.9         3.2          5.7         2.3  virginica
122          5.6         2.8          4.9         2.0  virginica
123          7.7         2.8          6.7         2.0  virginica
124          6.3         2.7          4.9         1.8  virginica
125          6.7         3.3          5.7         2.1  virginica
126          7.2         3.2          6.0         1.8  virginica
127          6.2         2.8          4.8         1.8  virginica
128          6.1         3.0          4.9         1.8  virginica
129          6.4         2.8          5.6         2.1  virginica
130          7.2         3.0          5.8         1.6  virginica
131          7.4         2.8          6.1         1.9  virginica
132          7.9         3.8          6.4         2.0  virginica
133          6.4         2.8          5.6         2.2  virginica
134          6.3         2.8          5.1         1.5  virginica
135          6.1         2.6          5.6         1.4  virginica
136          7.7         3.0          6.1         2.3  virginica
137          6.3         3.4          5.6         2.4  virginica
138          6.4         3.1          5.5         1.8  virginica
139          6.0         3.0          4.8         1.8  virginica
140          6.9         3.1          5.4         2.1  virginica
141          6.7         3.1          5.6         2.4  virginica
142          6.9         3.1          5.1         2.3  virginica
143          5.8         2.7          5.1         1.9  virginica
144          6.8         3.2          5.9         2.3  virginica
145          6.7         3.3          5.7         2.5  virginica
146          6.7         3.0          5.2         2.3  virginica
147          6.3         2.5          5.0         1.9  virginica
148          6.5         3.0          5.2         2.0  virginica
149          6.2         3.4          5.4         2.3  virginica
150          5.9         3.0          5.1         1.8  virginica
data$Species
  [1] setosa     setosa     setosa     setosa     setosa     setosa    
  [7] setosa     setosa     setosa     setosa     setosa     setosa    
 [13] setosa     setosa     setosa     setosa     setosa     setosa    
 [19] setosa     setosa     setosa     setosa     setosa     setosa    
 [25] setosa     setosa     setosa     setosa     setosa     setosa    
 [31] setosa     setosa     setosa     setosa     setosa     setosa    
 [37] setosa     setosa     setosa     setosa     setosa     setosa    
 [43] setosa     setosa     setosa     setosa     setosa     setosa    
 [49] setosa     setosa     versicolor versicolor versicolor versicolor
 [55] versicolor versicolor versicolor versicolor versicolor versicolor
 [61] versicolor versicolor versicolor versicolor versicolor versicolor
 [67] versicolor versicolor versicolor versicolor versicolor versicolor
 [73] versicolor versicolor versicolor versicolor versicolor versicolor
 [79] versicolor versicolor versicolor versicolor versicolor versicolor
 [85] versicolor versicolor versicolor versicolor versicolor versicolor
 [91] versicolor versicolor versicolor versicolor versicolor versicolor
 [97] versicolor versicolor versicolor versicolor virginica  virginica 
[103] virginica  virginica  virginica  virginica  virginica  virginica 
[109] virginica  virginica  virginica  virginica  virginica  virginica 
[115] virginica  virginica  virginica  virginica  virginica  virginica 
[121] virginica  virginica  virginica  virginica  virginica  virginica 
[127] virginica  virginica  virginica  virginica  virginica  virginica 
[133] virginica  virginica  virginica  virginica  virginica  virginica 
[139] virginica  virginica  virginica  virginica  virginica  virginica 
[145] virginica  virginica  virginica  virginica  virginica  virginica 
Levels: setosa versicolor virginica
data[1:5,1:3]
  Sepal.Length Sepal.Width Petal.Length
1          5.1         3.5          1.4
2          4.9         3.0          1.4
3          4.7         3.2          1.3
4          4.6         3.1          1.5
5          5.0         3.6          1.4
data
    Sepal.Length Sepal.Width Petal.Length Petal.Width    Species
1            5.1         3.5          1.4         0.2     setosa
2            4.9         3.0          1.4         0.2     setosa
3            4.7         3.2          1.3         0.2     setosa
4            4.6         3.1          1.5         0.2     setosa
5            5.0         3.6          1.4         0.2     setosa
6            5.4         3.9          1.7         0.4     setosa
7            4.6         3.4          1.4         0.3     setosa
8            5.0         3.4          1.5         0.2     setosa
9            4.4         2.9          1.4         0.2     setosa
10           4.9         3.1          1.5         0.1     setosa
11           5.4         3.7          1.5         0.2     setosa
12           4.8         3.4          1.6         0.2     setosa
13           4.8         3.0          1.4         0.1     setosa
14           4.3         3.0          1.1         0.1     setosa
15           5.8         4.0          1.2         0.2     setosa
16           5.7         4.4          1.5         0.4     setosa
17           5.4         3.9          1.3         0.4     setosa
18           5.1         3.5          1.4         0.3     setosa
19           5.7         3.8          1.7         0.3     setosa
20           5.1         3.8          1.5         0.3     setosa
21           5.4         3.4          1.7         0.2     setosa
22           5.1         3.7          1.5         0.4     setosa
23           4.6         3.6          1.0         0.2     setosa
24           5.1         3.3          1.7         0.5     setosa
25           4.8         3.4          1.9         0.2     setosa
26           5.0         3.0          1.6         0.2     setosa
27           5.0         3.4          1.6         0.4     setosa
28           5.2         3.5          1.5         0.2     setosa
29           5.2         3.4          1.4         0.2     setosa
30           4.7         3.2          1.6         0.2     setosa
31           4.8         3.1          1.6         0.2     setosa
32           5.4         3.4          1.5         0.4     setosa
33           5.2         4.1          1.5         0.1     setosa
34           5.5         4.2          1.4         0.2     setosa
35           4.9         3.1          1.5         0.2     setosa
36           5.0         3.2          1.2         0.2     setosa
37           5.5         3.5          1.3         0.2     setosa
38           4.9         3.6          1.4         0.1     setosa
39           4.4         3.0          1.3         0.2     setosa
40           5.1         3.4          1.5         0.2     setosa
41           5.0         3.5          1.3         0.3     setosa
42           4.5         2.3          1.3         0.3     setosa
43           4.4         3.2          1.3         0.2     setosa
44           5.0         3.5          1.6         0.6     setosa
45           5.1         3.8          1.9         0.4     setosa
46           4.8         3.0          1.4         0.3     setosa
47           5.1         3.8          1.6         0.2     setosa
48           4.6         3.2          1.4         0.2     setosa
49           5.3         3.7          1.5         0.2     setosa
50           5.0         3.3          1.4         0.2     setosa
51           7.0         3.2          4.7         1.4 versicolor
52           6.4         3.2          4.5         1.5 versicolor
53           6.9         3.1          4.9         1.5 versicolor
54           5.5         2.3          4.0         1.3 versicolor
55           6.5         2.8          4.6         1.5 versicolor
56           5.7         2.8          4.5         1.3 versicolor
57           6.3         3.3          4.7         1.6 versicolor
58           4.9         2.4          3.3         1.0 versicolor
59           6.6         2.9          4.6         1.3 versicolor
60           5.2         2.7          3.9         1.4 versicolor
61           5.0         2.0          3.5         1.0 versicolor
62           5.9         3.0          4.2         1.5 versicolor
63           6.0         2.2          4.0         1.0 versicolor
64           6.1         2.9          4.7         1.4 versicolor
65           5.6         2.9          3.6         1.3 versicolor
66           6.7         3.1          4.4         1.4 versicolor
67           5.6         3.0          4.5         1.5 versicolor
68           5.8         2.7          4.1         1.0 versicolor
69           6.2         2.2          4.5         1.5 versicolor
70           5.6         2.5          3.9         1.1 versicolor
71           5.9         3.2          4.8         1.8 versicolor
72           6.1         2.8          4.0         1.3 versicolor
73           6.3         2.5          4.9         1.5 versicolor
74           6.1         2.8          4.7         1.2 versicolor
75           6.4         2.9          4.3         1.3 versicolor
76           6.6         3.0          4.4         1.4 versicolor
77           6.8         2.8          4.8         1.4 versicolor
78           6.7         3.0          5.0         1.7 versicolor
79           6.0         2.9          4.5         1.5 versicolor
80           5.7         2.6          3.5         1.0 versicolor
81           5.5         2.4          3.8         1.1 versicolor
82           5.5         2.4          3.7         1.0 versicolor
83           5.8         2.7          3.9         1.2 versicolor
84           6.0         2.7          5.1         1.6 versicolor
85           5.4         3.0          4.5         1.5 versicolor
86           6.0         3.4          4.5         1.6 versicolor
87           6.7         3.1          4.7         1.5 versicolor
88           6.3         2.3          4.4         1.3 versicolor
89           5.6         3.0          4.1         1.3 versicolor
90           5.5         2.5          4.0         1.3 versicolor
91           5.5         2.6          4.4         1.2 versicolor
92           6.1         3.0          4.6         1.4 versicolor
93           5.8         2.6          4.0         1.2 versicolor
94           5.0         2.3          3.3         1.0 versicolor
95           5.6         2.7          4.2         1.3 versicolor
96           5.7         3.0          4.2         1.2 versicolor
97           5.7         2.9          4.2         1.3 versicolor
98           6.2         2.9          4.3         1.3 versicolor
99           5.1         2.5          3.0         1.1 versicolor
100          5.7         2.8          4.1         1.3 versicolor
101          6.3         3.3          6.0         2.5  virginica
102          5.8         2.7          5.1         1.9  virginica
103          7.1         3.0          5.9         2.1  virginica
104          6.3         2.9          5.6         1.8  virginica
105          6.5         3.0          5.8         2.2  virginica
106          7.6         3.0          6.6         2.1  virginica
107          4.9         2.5          4.5         1.7  virginica
108          7.3         2.9          6.3         1.8  virginica
109          6.7         2.5          5.8         1.8  virginica
110          7.2         3.6          6.1         2.5  virginica
111          6.5         3.2          5.1         2.0  virginica
112          6.4         2.7          5.3         1.9  virginica
113          6.8         3.0          5.5         2.1  virginica
114          5.7         2.5          5.0         2.0  virginica
115          5.8         2.8          5.1         2.4  virginica
116          6.4         3.2          5.3         2.3  virginica
117          6.5         3.0          5.5         1.8  virginica
118          7.7         3.8          6.7         2.2  virginica
119          7.7         2.6          6.9         2.3  virginica
120          6.0         2.2          5.0         1.5  virginica
121          6.9         3.2          5.7         2.3  virginica
122          5.6         2.8          4.9         2.0  virginica
123          7.7         2.8          6.7         2.0  virginica
124          6.3         2.7          4.9         1.8  virginica
125          6.7         3.3          5.7         2.1  virginica
126          7.2         3.2          6.0         1.8  virginica
127          6.2         2.8          4.8         1.8  virginica
128          6.1         3.0          4.9         1.8  virginica
129          6.4         2.8          5.6         2.1  virginica
130          7.2         3.0          5.8         1.6  virginica
131          7.4         2.8          6.1         1.9  virginica
132          7.9         3.8          6.4         2.0  virginica
133          6.4         2.8          5.6         2.2  virginica
134          6.3         2.8          5.1         1.5  virginica
135          6.1         2.6          5.6         1.4  virginica
136          7.7         3.0          6.1         2.3  virginica
137          6.3         3.4          5.6         2.4  virginica
138          6.4         3.1          5.5         1.8  virginica
139          6.0         3.0          4.8         1.8  virginica
140          6.9         3.1          5.4         2.1  virginica
141          6.7         3.1          5.6         2.4  virginica
142          6.9         3.1          5.1         2.3  virginica
143          5.8         2.7          5.1         1.9  virginica
144          6.8         3.2          5.9         2.3  virginica
145          6.7         3.3          5.7         2.5  virginica
146          6.7         3.0          5.2         2.3  virginica
147          6.3         2.5          5.0         1.9  virginica
148          6.5         3.0          5.2         2.0  virginica
149          6.2         3.4          5.4         2.3  virginica
150          5.9         3.0          5.1         1.8  virginica

STEP 4:

table(data$Species)

    setosa versicolor  virginica 
        50         50         50 

STEP 5: Create a basic scatter plot (no categories yet)

A scatter plot shows the relationship between two numeric variables.

Here we plot:

  • X-axis: Sepal.Length
  • Y-axis: Sepal.Width

Important point:

  • Each dot represents one flower (one row in the dataset).
ggplot(data,aes(x = Sepal.Length, y = Sepal.Width)) +
  geom_point()

STEP 6: Add a categorical grouping using color = Species

Now we include the categorical variable:

  • color = Species tells ggplot2 to assign a different color to each species.

What changes?

  • The plot now visually seperates the three species based on color.
  • This is the main “categorical analysis”idea: we can see if different groups cluster differently.
ggplot(data,aes(x = Sepal.Length, y = Sepal.Width, color = Species)) +
  geom_point()

STEP 7: Improve point visibility (size and transperancy)

We adjust how points look:

  • size = 3 makes each dot bigger , so it is easier to see.
  • alpha = 0.7 makes dots slightly transparent, which helps when points overlap.

Why transparency helps:

-If many points overlap in the same region, transperency makes dense areas more visible.

ggplot(data,aes(x = Sepal.Length, y = Sepal.Width, color = Species)) +
  geom_point(size = 3, alpha = 0.7)

STEP 8: Add informative labels (title, axes, legend)

Good plots should clearly communicate what the viewer is seeing.

labs() adds:

  • title for the plot heading.
  • x and y labels.
  • color legend title (so the legend has a meaningful name)
ggplot(data,aes(x = Sepal.Length, y = Sepal.Width, color = Species)) +
  geom_point(size = 3, alpha = 0.7) +
  labs(
    title = "Scatter Plot of Sepal Dimensions ",
    x = "Sepal Length",
    y = "Sepal Width",
    color = "Species"
  )

STEP 9: Apply a clean theme and move the legend

Themes control the background, grids, and text styling.

  • theme_minimal() removes heavy backgrounds and gives a clean look.
  • theme(legend.position = "top") moves the lehgend above the plot.

Why move the legend?

  • When the legend is at the top, it is often easier to notice and read, especially in presentations.
ggplot(data,aes(x = Sepal.Length, y = Sepal.Width, color = Species)) +
  geom_point(size = 3, alpha = 0.7) +
  labs(
    title = "Scatter Plot of Sepal Dimensions ",
    x = "Sepal Length",
    y = "Sepal Width",
    color = "Species"
  ) +
  theme_minimal() +
  theme(legend.position = "top")

Discussion Questions

  1. Do you see clusters of points by species?

ANS:Yes, clusters of points are visible by species in the scatter plot.

Setosa forms a clearly distinct cluster, while Versicolor and Virginica form clusters that slightly overlap but can still be differentiated.

  1. Which species appears most separated from the others?

ANS:Setosa appears most separated from the other species.

It forms a distinct cluster with smaller sepal length and larger sepal width, clearly separated from Versicolor and Virginica.

  1. What happens if you plot ‘Petal.length’ vs ‘Petal.width’ instead?

ANS:If you plot Petal.Length vs Petal.Width, the species separation becomes much clearer.

Setosa forms a completely distinct cluster (very clearly separated).

Versicolor and Virginica are also better separated compared to the sepal plot.

Only slight overlap may occur between Versicolor and Virginica.

  1. What changes if you remove ‘alpha’ or increase ‘size’ further?

ANS:If you remove alpha:

Points become fully opaque (no transparency).

Overlapping points will hide each other.

Dense regions become harder to interpret.

If you increase size further:

Points become larger.

Plot may look crowded.

Overlapping increases, making clusters less clear.