Randomization
#For MACU01 samples, it has two sites (TOR or EBB, identified as “1” or “2” in the clinical metadata file. The 432 samples will be distributed into 6 Olink REVEAL plates, with 80 samples for plate 1 to plate 5, and the rest of 32 samples in plate 6.
## # A tibble: 6 × 6
## pid studysite sex age malaria_rdt_result hiv_rdt_result
## <chr> <dbl> <dbl> <dbl> <dbl> <dbl>
## 1 CL-1-TRO 2 2 21 0 0
## 2 CL-10-TRO 2 2 22 1 0
## 3 CL-100-TRO 2 1 69 0 1
## 4 CL-103-TRO 2 2 35 1 1
## 5 CL-105-TRO 2 1 45 0 1
## 6 CL-107-TRO 2 1 23 0 0## Total samples count: 432## # A tibble: 2 × 2
## studysite N_sample
## <chr> <int>
## 1 1 147
## 2 2 285Vignette #1: 80 samples for plate 1 to plate 5, and the rest of 32 samples in plate 6
Plate layout
Distribution
## # A tibble: 0 × 12
## # ℹ 12 variables: pid <chr>, studysite <chr>, sex <chr>, age <dbl>,
## # malaria_rdt_result <chr>, hiv_rdt_result <chr>, SubjectID <chr>,
## # SampleID <chr>, plate <chr>, column <fct>, row <fct>, well <fct>
## Warning: Using `bins = 30` by default. Pick better value with the argument
## `bins`.