Mouse Sinoatrial Node, Lung, Intestine Visium HD Analysis

Qiu lab @UA College of Medicine - Phoenix.
Visium HD analysis on collaborative projects
Multiple mouse tissues including sinoatrial nodes, lung, spleen and intestine

Dissected mouse SAN tissue, and cell clusters
Note this is the segmented output from Space Ranger V4.0.1

Cell segmentation is based on H&E staining and nucleus expansion`

Viaium HD analysis of the mouse heart SAN tissue, microdissected for sectioning into 15um thickness. Spatial distribution of selected genes that are heavily expressed in SAN.

Two mouse lung sections, control and KO



mouse lung, FOV_1 clusters are well separated.

mouse lung, FOV_1 beautiful seperation of clusters

Another mouse lung section, different ROI

mouse intestine section

Mouse intestine section