Single cell RNAseq and spatial transcriptomics facility @UA COM_PHX

Qiu lab @UA College of Medicine - Phoenix.
Now Xenium Analyzer has been installed, together with CytAssist, Chromium X

Web Summary for first Xenium run on 10X Genomics training tissue
Note a small probe panel is used for training, this explains the low median transcript number

Xenium run on 10X Genomics training tissue, decoded cells and transcripts

Xenium Analyzer decoding of cerebellum transcriptome with select transcripts


Xenium Analysis of nodose ganglia

Brain stem section, with cell contours and select transcripts

Another brain stem section, different ROI

mouse lung section

Mouse Nodose ganglia section