R Markdown

This is an R Markdown document. Markdown is a simple formatting syntax for authoring HTML, PDF, and MS Word documents. For more details on using R Markdown see http://rmarkdown.rstudio.com.

When you click the Knit button a document will be generated that includes both content as well as the output of any embedded R code chunks within the document. You can embed an R code chunk like this:

library(class)
## Warning: package 'class' was built under R version 4.4.3
library(gmodels)
## Warning: package 'gmodels' was built under R version 4.4.3
data(iris)
str(iris)
## 'data.frame':    150 obs. of  5 variables:
##  $ Sepal.Length: num  5.1 4.9 4.7 4.6 5 5.4 4.6 5 4.4 4.9 ...
##  $ Sepal.Width : num  3.5 3 3.2 3.1 3.6 3.9 3.4 3.4 2.9 3.1 ...
##  $ Petal.Length: num  1.4 1.4 1.3 1.5 1.4 1.7 1.4 1.5 1.4 1.5 ...
##  $ Petal.Width : num  0.2 0.2 0.2 0.2 0.2 0.4 0.3 0.2 0.2 0.1 ...
##  $ Species     : Factor w/ 3 levels "setosa","versicolor",..: 1 1 1 1 1 1 1 1 1 1 ...
summary(iris)
##   Sepal.Length    Sepal.Width     Petal.Length    Petal.Width   
##  Min.   :4.300   Min.   :2.000   Min.   :1.000   Min.   :0.100  
##  1st Qu.:5.100   1st Qu.:2.800   1st Qu.:1.600   1st Qu.:0.300  
##  Median :5.800   Median :3.000   Median :4.350   Median :1.300  
##  Mean   :5.843   Mean   :3.057   Mean   :3.758   Mean   :1.199  
##  3rd Qu.:6.400   3rd Qu.:3.300   3rd Qu.:5.100   3rd Qu.:1.800  
##  Max.   :7.900   Max.   :4.400   Max.   :6.900   Max.   :2.500  
##        Species  
##  setosa    :50  
##  versicolor:50  
##  virginica :50  
##                 
##                 
## 
table(iris$Species)
## 
##     setosa versicolor  virginica 
##         50         50         50
set.seed(123)
ind <- sample(2, nrow(iris), replace = TRUE, prob = c(0.7, 0.3))
print(ind)
##   [1] 1 2 1 2 2 1 1 2 1 1 2 1 1 1 1 2 1 1 1 2 2 1 1 2 1 2 1 1 1 1 2 2 1 2 1 1 2
##  [38] 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 2 2 1 1 1 1 1 2 1 2 2 2 1 2 1 2 1
##  [75] 1 1 1 1 1 1 1 1 1 2 1 1 2 2 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 2 2 1 1 1 2
## [112] 1 1 2 2 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 2 1 2 1 1 2 2 2 1 1 1 1 1 2 1 1 1
## [149] 1 2
trainData <- iris[ind == 1, ]
testData <- iris[ind == 2, ]
trainData1 <- trainData[, -5]
testData1 <- testData[, -5]
str(trainData1)
## 'data.frame':    106 obs. of  4 variables:
##  $ Sepal.Length: num  5.1 4.7 5.4 4.6 4.4 4.9 4.8 4.8 4.3 5.8 ...
##  $ Sepal.Width : num  3.5 3.2 3.9 3.4 2.9 3.1 3.4 3 3 4 ...
##  $ Petal.Length: num  1.4 1.3 1.7 1.4 1.4 1.5 1.6 1.4 1.1 1.2 ...
##  $ Petal.Width : num  0.2 0.2 0.4 0.3 0.2 0.1 0.2 0.1 0.1 0.2 ...
str(testData1)
## 'data.frame':    44 obs. of  4 variables:
##  $ Sepal.Length: num  4.9 4.6 5 5 5.4 5.7 5.1 5.4 5.1 5 ...
##  $ Sepal.Width : num  3 3.1 3.6 3.4 3.7 4.4 3.8 3.4 3.3 3 ...
##  $ Petal.Length: num  1.4 1.5 1.4 1.5 1.5 1.5 1.5 1.7 1.7 1.6 ...
##  $ Petal.Width : num  0.2 0.2 0.2 0.2 0.2 0.4 0.3 0.2 0.5 0.2 ...
trainLabels <- trainData$Species
testLabels <- testData$Species
test_pred <- knn(train = trainData1, test = testData1, cl = trainLabels, k = 3)
CrossTable(x = testLabels, y = test_pred, prop.chisq = FALSE)
## 
##  
##    Cell Contents
## |-------------------------|
## |                       N |
## |           N / Row Total |
## |           N / Col Total |
## |         N / Table Total |
## |-------------------------|
## 
##  
## Total Observations in Table:  44 
## 
##  
##              | test_pred 
##   testLabels |     setosa | versicolor |  virginica |  Row Total | 
## -------------|------------|------------|------------|------------|
##       setosa |         15 |          0 |          0 |         15 | 
##              |      1.000 |      0.000 |      0.000 |      0.341 | 
##              |      1.000 |      0.000 |      0.000 |            | 
##              |      0.341 |      0.000 |      0.000 |            | 
## -------------|------------|------------|------------|------------|
##   versicolor |          0 |         12 |          2 |         14 | 
##              |      0.000 |      0.857 |      0.143 |      0.318 | 
##              |      0.000 |      0.923 |      0.125 |            | 
##              |      0.000 |      0.273 |      0.045 |            | 
## -------------|------------|------------|------------|------------|
##    virginica |          0 |          1 |         14 |         15 | 
##              |      0.000 |      0.067 |      0.933 |      0.341 | 
##              |      0.000 |      0.077 |      0.875 |            | 
##              |      0.000 |      0.023 |      0.318 |            | 
## -------------|------------|------------|------------|------------|
## Column Total |         15 |         13 |         16 |         44 | 
##              |      0.341 |      0.295 |      0.364 |            | 
## -------------|------------|------------|------------|------------|
## 
## 
accuracy <- sum(testLabels == test_pred) / length(testLabels)
print(paste("Model Accuracy:", round(accuracy * 100, 2), "%"))
## [1] "Model Accuracy: 93.18 %"

Including Plots

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