R Markdown

This is an R Markdown document. Markdown is a simple formatting syntax for authoring HTML, PDF, and MS Word documents. For more details on using R Markdown see http://rmarkdown.rstudio.com.

When you click the Knit button a document will be generated that includes both content as well as the output of any embedded R code chunks within the document. You can embed an R code chunk like this:

subject_name<-c("John Doe","Jane Doe","Steve Graves")
temperature<-c(98.1,98.6,101.4)
flu_status<-c(FALSE,FALSE,TRUE)
temperature[2]
## [1] 98.6
temperature[2:3]
## [1]  98.6 101.4
temperature[-2]
## [1]  98.1 101.4
gender<-factor(c("MALE","FEMALE","MALE"))
gender
## [1] MALE   FEMALE MALE  
## Levels: FEMALE MALE
blood<-factor(c("O","AB-","A"),levels=c("A","B","AB+","O-"))

symptoms<-factor(c("SEVERE", "MILD", "MODERATE"), levels = c("MILD","MODERATE","SEVERE"),ordered = TRUE)
symptoms
## [1] SEVERE   MILD     MODERATE
## Levels: MILD < MODERATE < SEVERE
symptoms > "MODERATE"
## [1]  TRUE FALSE FALSE
pt_data<-data.frame(subject_name,temperature,flu_status,gender,blood,symptoms,stringsAsFactors = FALSE)
pt_data
##   subject_name temperature flu_status gender blood symptoms
## 1     John Doe        98.1      FALSE   MALE  <NA>   SEVERE
## 2     Jane Doe        98.6      FALSE FEMALE  <NA>     MILD
## 3 Steve Graves       101.4       TRUE   MALE     A MODERATE
pt_data[1,2]
## [1] 98.1
pt_data[,]
##   subject_name temperature flu_status gender blood symptoms
## 1     John Doe        98.1      FALSE   MALE  <NA>   SEVERE
## 2     Jane Doe        98.6      FALSE FEMALE  <NA>     MILD
## 3 Steve Graves       101.4       TRUE   MALE     A MODERATE
pt_data[c(1,3),c(2,4)]
##   temperature gender
## 1        98.1   MALE
## 3       101.4   MALE
pt_data[c(1,3),c("temperature","gender")]
##   temperature gender
## 1        98.1   MALE
## 3       101.4   MALE
pt_data$temp_c<-(pt_data$temperature-32)*(5/9)
pt_data
##   subject_name temperature flu_status gender blood symptoms   temp_c
## 1     John Doe        98.1      FALSE   MALE  <NA>   SEVERE 36.72222
## 2     Jane Doe        98.6      FALSE FEMALE  <NA>     MILD 37.00000
## 3 Steve Graves       101.4       TRUE   MALE     A MODERATE 38.55556

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