This document was created to analyze NCRMP BMU data

1 Data exploration

1.1 BAR data

1.1.1 Summary

There are a total of 620 bars included in this study. Sites are divided at three levels across 2 basins. The highest level (loc1) includes 8 large regions including:
florida, caribbean, flowerGardenBanks, northwestHawaiianIslands, marianas, middleHawaiianIslands, pacificRemoteIslandArea, samoa

Within these larger regions are 21 sublevels (loc2) that are generally inclusive of an island including:
keys, saintCroix, saintThomas, puertoRico, flowerGardenBanks, dryTortugas, saintJohn, frenchFrigateShoals, guam, hawaii, jarvis, maug, oahu, ofu, pagan, palmyra, pearlHermes, saipan, tau, tutuila, wake

Most islands or loc2 level includes multiple sites (loc3) within it, totaling 64 loc3 levels across both basins

Deployment dates ranged from 2013-06-19 to 2020-03-06 and recovery dates ranged from 2017-03-29 to 2023-01-11. The deployment duration ranged from 906 to 2373 days and was on 1373.4983871 days.

1.1.2 Calculation of stats for bar alteration by loc2

location
deployment
depth
deltaMass
deltaVolume
deltaDensity
macroboring
grazing
accretion
basin loc1 loc2 maxDays minDays n maxDepth minDepth meanDepth meanDeltaMass sdDeltaMass seDeltaMass meanDeltaVolume sdDeltaVolume seDeltaVolume meanDeltaDensity sdDeltaDensity seDeltaDensity meanMacroboring sdMacroboring seMacroboring meanGrazing sdGrazing seGrazing meanAccretion sdAccretion seAccretion
atlantic caribbean puertoRico 1798 1140 22 20.20000 15.00000 18.163636 -27.781200 42.06703 8.968720 -30.234508 25.996844 5.542546 1.7207472 2.2396020 0.4774847 -7.2962130 7.1244948 1.5189474 -22.938295 27.452674 5.8529297 6.637224 5.747459 1.2253625
atlantic caribbean saintCroix 1441 1090 64 15.00000 15.00000 15.000000 -15.386204 37.80394 4.725492 -33.872755 27.935882 3.491985 NA NA NA -5.7147132 9.9637041 1.2454630 -28.158042 27.616090 3.4520112 11.764785 7.506407 0.9383008
atlantic caribbean saintThomas 1142 1142 1 10.00000 10.00000 10.000000 -133.403185 NA NA -108.430237 NA NA NA NA NA -0.8723615 NA NA -107.557875 NA NA 1.594986 NA NA
atlantic florida dryTortugas 1081 1043 10 13.70000 13.10000 13.520000 -27.981126 37.01874 11.706353 -35.875611 29.009031 9.173461 -1.3026215 2.5557500 0.8081991 -4.5588555 5.7996570 1.8340126 -31.316755 26.276540 8.3093716 6.927189 3.586943 1.1342911
atlantic florida keys 2373 956 187 15.00000 3.00000 6.751337 7.257004 44.55259 3.258008 -28.483333 23.525537 1.720358 1.2062018 1.5397075 0.1125946 -3.4655119 5.9426993 0.4345732 -25.017821 22.579370 1.6511670 20.887771 13.599324 0.9944810
atlantic flowerGardenBanks flowerGardenBanks 1463 1220 11 21.00000 20.00000 20.200000 -76.539423 39.53487 11.920210 -69.583220 24.749749 7.462330 1.8846595 2.1678808 0.6536407 -0.7397314 1.1898764 0.3587612 -68.843489 25.330559 7.6374510 5.452492 4.503129 1.3577446
pacific marianas guam 1813 1085 26 54.00000 14.93447 34.609652 8.276507 92.51558 18.143798 -33.855639 33.312927 6.533202 NA NA NA -1.2501417 2.0589327 0.4037899 -32.605498 33.821218 6.6328866 35.274810 64.179450 12.5866257
pacific marianas maug 1840 1133 68 53.00000 14.02012 27.792370 -24.562691 37.38647 4.533776 -38.586917 24.675186 2.992306 NA NA NA -1.1165915 0.8214852 0.0996197 -37.470326 24.653607 2.9896890 8.919800 11.101245 1.3462237
pacific marianas pagan 1879 1136 34 51.00000 13.71533 31.689343 -1.579577 33.83219 5.802173 -24.571898 19.115032 3.278201 NA NA NA -3.2664161 5.8878297 1.0097545 -21.305482 19.149447 3.2841031 16.321109 14.756338 2.5306912
pacific marianas saipan 1800 1127 26 57.00000 12.19141 29.598024 -43.908249 49.70417 9.747791 -51.602703 31.190711 6.117002 NA NA NA -1.5884351 4.1331845 0.8105842 -50.014268 31.837029 6.2437551 10.126926 10.221207 2.0045437
pacific middleHawaiianIslands hawaii 1064 1064 14 14.02080 13.71600 13.824857 -31.336150 35.78882 9.564966 -35.041313 19.323354 5.164383 1.1628690 1.1891907 0.3178246 -9.3654770 11.0797369 2.9611842 -25.675836 19.445531 5.1970367 8.732060 5.853029 1.5642878
pacific middleHawaiianIslands oahu 1078 906 16 15.24000 12.49680 13.411050 -25.141403 38.58704 9.646760 -37.712637 24.273693 6.068423 NA NA NA -7.0670335 11.1485473 2.7871368 -30.645603 25.899608 6.4749021 12.872685 12.649153 3.1622882
pacific northwestHawaiianIslands frenchFrigateShoals 1089 1089 1 12.49680 12.49680 12.496800 -24.345902 NA NA -34.942857 NA NA 1.3862626 NA NA -0.0933757 NA NA -34.849481 NA NA 10.992204 NA NA
pacific northwestHawaiianIslands pearlHermes 1094 1088 11 14.32560 14.32560 14.325600 -6.538328 29.38793 8.860796 -20.892874 16.848333 5.079963 1.2960100 0.3244652 0.0978299 -3.4469897 8.7388671 2.6348676 -17.445884 14.806557 4.4643448 8.845732 12.318381 3.7141317
pacific pacificRemoteIslandArea jarvis 1210 1205 11 49.00000 48.00000 48.636364 -88.718509 49.60970 14.957886 -71.386662 38.372925 11.569872 -1.6565091 3.3014693 0.9954304 -1.7231465 0.8874921 0.2675889 -69.663516 38.978723 11.7525271 4.382957 3.402341 1.0258444
pacific pacificRemoteIslandArea palmyra 1207 1202 13 50.00000 47.00000 47.923077 -28.061296 90.42410 25.079132 -44.699264 34.257956 9.501447 0.4419434 1.0011041 0.2776563 -2.7052087 8.2633792 2.2918490 -41.994056 33.640937 9.3303171 21.412407 33.676433 9.3401619
pacific pacificRemoteIslandArea wake 1099 1063 15 14.62969 13.71533 14.304582 -19.088995 139.16038 35.931055 -56.801885 32.002044 8.262892 NA NA NA -0.7510734 0.9669246 0.2496589 -56.050812 31.892805 8.2346869 41.479117 68.708904 17.7405626
pacific samoa ofu 1214 1199 9 50.00000 45.00000 47.777778 6.111376 43.38518 14.461725 -20.392870 14.353758 4.784586 -0.1079433 2.8486583 0.9495528 -4.6483512 6.4565787 2.1521929 -15.744519 12.406812 4.1356040 22.843019 16.682890 5.5609633
pacific samoa tau 1215 1206 9 50.00000 49.00000 49.555556 53.866506 32.66238 10.887459 -4.098117 4.462343 1.487448 -0.0427049 1.9443070 0.6481023 -2.1981224 3.4949930 1.1649977 -1.899995 2.692464 0.8974882 42.734038 22.791004 7.5970013
pacific samoa tutuila 1223 1216 20 50.00000 47.00000 48.250000 29.776469 81.02769 18.118342 -22.441706 20.001976 4.472578 -0.4338167 1.4480000 0.3237826 -3.2690847 2.9480905 0.6592131 -19.172621 20.751039 4.6400734 34.252167 39.971736 8.9379520

1.1.3 Number and deployment duration by loc3

location
gps
sample size
depth
duration
basin loc1 loc2 loc3 latitude longitude n maxDepth minDepth maxDays minDays
atlantic caribbean puertoRico NA 17.91047 -66.23161 5 19.80000 19.80000 1620 1620
atlantic caribbean puertoRico NA 17.95355 -67.05065 9 15.00000 15.00000 1534 1140
atlantic caribbean puertoRico NA 18.33066 -65.33373 5 18.60000 18.60000 1730 1730
atlantic caribbean puertoRico NA 18.33696 -65.56462 5 19.80000 19.80000 1741 1741
atlantic caribbean puertoRico NA 18.34435 -67.26923 5 20.20000 20.20000 1573 1573
atlantic caribbean puertoRico NA 18.48227 -66.72124 4 19.90000 19.90000 1798 1798
atlantic caribbean saintCroix NA 17.70121 -64.64793 15 15.00000 15.00000 1094 1092
atlantic caribbean saintCroix NA 17.73380 -64.89639 15 15.00000 15.00000 1095 1091
atlantic caribbean saintCroix NA 17.78532 -64.75953 20 15.00000 15.00000 1441 1090
atlantic caribbean saintCroix NA 17.82805 -64.46711 14 15.00000 15.00000 1095 1090
atlantic caribbean saintJohn NA 18.30976 -64.72299 5 15.70000 15.70000 1632 1632
atlantic caribbean saintJohn NA 18.32802 -64.80903 4 14.50000 14.50000 1686 1686
atlantic caribbean saintJohn NA 18.34744 -64.66539 3 15.60000 15.60000 1681 1681
atlantic caribbean saintJohn NA 18.36316 -64.77052 4 15.90000 15.90000 1669 1669
atlantic caribbean saintThomas NA 18.34082 -65.08269 3 16.00000 16.00000 1657 1657
atlantic caribbean saintThomas NA 18.34402 -64.98453 1 10.00000 10.00000 1142 1142
atlantic caribbean saintThomas NA 18.34435 -64.98433 5 10.00000 10.00000 1950 1950
atlantic caribbean saintThomas NA 18.38262 -64.97816 4 15.50000 15.50000 1650 1650
atlantic florida dryTortugas birdKeyReef 24.61123 -82.87045 10 13.70000 13.10000 1081 1043
atlantic florida keys LKI1 24.58590 -81.58272 9 3.00000 3.00000 2373 2373
atlantic florida keys LKI2 24.57899 -81.49734 8 6.50000 6.50000 2373 2373
atlantic florida keys LKO1 24.52202 -81.57709 10 5.00000 5.00000 2373 2373
atlantic florida keys LKO2 24.55326 -81.43753 19 7.00000 7.00000 2373 956
atlantic florida keys MKI1 24.68554 -81.04336 18 3.50000 3.50000 1375 1005
atlantic florida keys MKI2 24.68988 -81.02940 20 5.00000 5.00000 1375 1005
atlantic florida keys MKO1 24.63127 -81.09255 13 6.00000 6.00000 1375 1005
atlantic florida keys MKO2 24.63388 -81.08344 18 5.00000 5.00000 1375 1005
atlantic florida keys UKI2 24.95375 -80.54806 19 5.00000 3.00000 1350 1100
atlantic florida keys UKO1 24.90250 -80.53104 18 15.00000 14.00000 1357 1100
atlantic florida keys UKO3 24.88266 -80.56088 18 15.00000 6.50000 1358 1100
atlantic florida keys cheecaRocks 24.89742 -80.61573 24 5.00000 5.00000 1379 1100
atlantic flowerGardenBanks flowerGardenBanks eastBank 27.90740 -93.59925 13 21.00000 20.00000 1463 1220
pacific marianas guam OCC-GUA-002 13.60334 144.92366 4 49.00000 49.00000 1805 1805
pacific marianas guam OCC-GUA-005 13.47516 144.86485 4 15.84883 15.84883 1142 1125
pacific marianas guam OCC-GUA-005 13.47520 144.86490 4 54.00000 54.00000 1813 1813
pacific marianas guam OCC-GUA-009 13.24126 144.70442 4 14.93447 14.93447 1161 1085
pacific marianas guam OCC-GUA-009 13.24210 144.70448 5 45.00000 45.00000 1808 1808
pacific marianas guam OCC-GUA-015 13.52894 144.80037 3 15.23926 15.23926 1158 1089
pacific marianas guam OCC-GUA-015 13.52896 144.80035 2 47.00000 47.00000 1804 1804
pacific marianas maug OCC-MAU-002 20.03567 145.22470 5 47.00000 47.00000 1840 1840
pacific marianas maug OCC-MAU-002 20.03570 145.22467 5 14.62969 14.62969 1142 1134
pacific marianas maug OCC-MAU-005 20.02033 145.23972 3 14.02012 14.02012 1135 1134
pacific marianas maug OCC-MAU-005 20.02039 145.23978 3 46.00000 46.00000 1836 1836
pacific marianas maug OCC-MAU-008 20.01312 145.20806 5 14.93447 14.93447 1143 1133
pacific marianas maug OCC-MAU-008 20.01315 145.20806 3 53.00000 53.00000 1834 1834
pacific marianas maug OCC-MAU-016 20.02296 145.22996 14 17.00000 17.00000 1834 1834
pacific marianas maug OCC-MAU-018 20.02249 145.22971 15 28.00000 28.00000 1834 1834
pacific marianas maug OCC-MAU-019 20.01398 145.22746 15 34.00000 34.00000 1834 1834
pacific marianas pagan OCC-PAG-002 18.16784 145.79495 5 14.62969 14.62969 1136 1136
pacific marianas pagan OCC-PAG-002 18.16788 145.79494 4 48.00000 48.00000 1877 1877
pacific marianas pagan OCC-PAG-006 18.09609 145.76488 4 51.00000 51.00000 1845 1845
pacific marianas pagan OCC-PAG-006 18.09612 145.76486 2 14.02012 14.02012 1137 1137
pacific marianas pagan OCC-PAG-009 18.04561 145.70621 5 51.00000 51.00000 1874 1874
pacific marianas pagan OCC-PAG-009 18.04564 145.70623 5 14.93447 14.93447 1139 1139
pacific marianas pagan OCC-PAG-013 18.12009 145.75469 5 46.00000 46.00000 1879 1879
pacific marianas pagan OCC-PAG-013 18.12014 145.75466 5 13.71533 13.71533 1150 1150
pacific marianas saipan OCC-SAI-002 15.29062 145.80941 2 13.71533 13.71533 1138 1129
pacific marianas saipan OCC-SAI-005 15.25866 145.81569 4 15.23926 15.23926 1133 1130
pacific marianas saipan OCC-SAI-005 15.25867 145.81567 5 47.00000 47.00000 1800 1800
pacific marianas saipan OCC-SAI-009 15.09785 145.74337 4 15.84883 15.84883 1147 1138
pacific marianas saipan OCC-SAI-009 15.09788 145.74338 2 57.00000 57.00000 1767 1767
pacific marianas saipan OCC-SAI-012 15.15639 145.68976 2 41.00000 41.00000 1800 1800
pacific marianas saipan OCC-SAI-012 15.15645 145.68970 4 12.19141 12.19141 1127 1127
pacific marianas saipan OCC-SAI-016 15.25719 145.76675 3 46.00000 46.00000 1770 1770
pacific middleHawaiianIslands hawaii OCC-HAW-002 20.26824 -155.86038 5 14.02080 14.02080 1064 1064
pacific middleHawaiianIslands hawaii OCC-HAW-010 19.24436 -155.90028 5 13.71600 13.71600 1064 1064
pacific middleHawaiianIslands hawaii OCC-HAW-014 20.24916 -155.89093 4 13.71600 13.71600 1064 1064
pacific middleHawaiianIslands oahu OCC-OAH-002 21.59095 -158.17467 2 15.24000 12.80160 1078 1075
pacific middleHawaiianIslands oahu OCC-OAH-005 21.47971 -157.78301 5 12.49680 12.49680 1076 1076
pacific middleHawaiianIslands oahu OCC-OAH-007 21.45862 -157.79865 2 14.93400 14.93400 906 906
pacific middleHawaiianIslands oahu OCC-OAH-010 21.28838 -157.86536 5 13.71600 13.71600 993 993
pacific middleHawaiianIslands oahu OCC-OAH-012 21.53412 -158.23441 1 12.80160 12.80160 1078 1078
pacific middleHawaiianIslands oahu OCC-OAH-012 21.59095 -158.17467 1 12.80160 12.80160 1078 1078
pacific northwestHawaiianIslands frenchFrigateShoals OCC-FFS-014 23.79247 -166.25372 1 12.49680 12.49680 1089 1089
pacific northwestHawaiianIslands pearlHermes OCC-PHR-002 27.94055 -175.86165 2 14.32560 14.32560 1094 1094
pacific northwestHawaiianIslands pearlHermes OCC-PHR-012 27.78237 -175.88195 5 14.32560 14.32560 1090 1090
pacific northwestHawaiianIslands pearlHermes OCC-PHR-016 27.79316 -175.99722 4 14.32560 14.32560 1088 1088
pacific pacificRemoteIslandArea jarvis OCC-JAR-003 -0.36896 -160.00813 3 49.00000 49.00000 1205 1205
pacific pacificRemoteIslandArea jarvis OCC-JAR-003 -0.36776 -159.97881 3 49.00000 49.00000 1208 1208
pacific pacificRemoteIslandArea jarvis OCC-JAR-008 -0.38234 -160.00305 5 48.00000 48.00000 1210 1210
pacific pacificRemoteIslandArea jarvis OCC-JAR-013 -0.36896 -160.00813 1 49.00000 49.00000 1205 1205
pacific pacificRemoteIslandArea palmyra OCC-PAL-003 5.89733 -162.07817 5 47.00000 47.00000 1207 1207
pacific pacificRemoteIslandArea palmyra OCC-PAL-008 5.86379 -162.03062 5 50.00000 50.00000 1207 1207
pacific pacificRemoteIslandArea palmyra OCC-PAL-017 5.88322 -162.13322 4 47.00000 47.00000 1202 1202
pacific pacificRemoteIslandArea wake OCC-WAK-002 19.31602 166.62721 4 13.71533 13.71533 1099 1096
pacific pacificRemoteIslandArea wake OCC-WAK-005 19.30616 166.65108 4 14.32490 14.32490 1090 1066
pacific pacificRemoteIslandArea wake OCC-WAK-008 19.28065 166.62778 4 14.62969 14.62969 1087 1064
pacific pacificRemoteIslandArea wake OCC-WAK-013 19.31625 166.59824 3 14.62969 14.62969 1070 1063
pacific samoa ofu OCC-OFU-002 -14.15785 -169.67442 4 45.00000 45.00000 1214 1214
pacific samoa ofu OCC-OFU-009 -14.17330 -169.64190 5 50.00000 50.00000 1199 1199
pacific samoa tau OCC-TAU-002 -14.21240 -169.44067 5 49.00000 49.00000 1215 1215
pacific samoa tau OCC-TAU-011 -14.25755 -169.50068 5 50.00000 50.00000 1206 1206
pacific samoa tutuila OCC-TUT-002 -14.24479 -170.65237 5 48.00000 48.00000 1218 1218
pacific samoa tutuila OCC-TUT-007 -14.28521 -170.56401 5 50.00000 50.00000 1223 1223
pacific samoa tutuila OCC-TUT-017 -14.36351 -170.76300 5 48.00000 48.00000 1216 1216
pacific samoa tutuila OCC-TUT-022 -14.29464 -170.81200 5 47.00000 47.00000 1218 1218

1.1.4 Deployment sites with multiple gps coordinates

Note: need to figure out what is going on here. Appears to be particularly prevalent of a problem in the Pacific (point for alliteration)
basin loc1 loc2 loc3 latitude longitude n maxDepth minDepth maxDays minDays
atlantic caribbean puertoRico NA 17.91047 -66.23161 5 19.80000 19.80000 1620 1620
atlantic caribbean puertoRico NA 17.95355 -67.05065 9 15.00000 15.00000 1534 1140
atlantic caribbean puertoRico NA 18.33066 -65.33373 5 18.60000 18.60000 1730 1730
atlantic caribbean puertoRico NA 18.33696 -65.56462 5 19.80000 19.80000 1741 1741
atlantic caribbean puertoRico NA 18.34435 -67.26923 5 20.20000 20.20000 1573 1573
atlantic caribbean puertoRico NA 18.48227 -66.72124 4 19.90000 19.90000 1798 1798
atlantic caribbean saintCroix NA 17.70121 -64.64793 15 15.00000 15.00000 1094 1092
atlantic caribbean saintCroix NA 17.73380 -64.89639 15 15.00000 15.00000 1095 1091
atlantic caribbean saintCroix NA 17.78532 -64.75953 20 15.00000 15.00000 1441 1090
atlantic caribbean saintCroix NA 17.82805 -64.46711 14 15.00000 15.00000 1095 1090
atlantic caribbean saintJohn NA 18.30976 -64.72299 5 15.70000 15.70000 1632 1632
atlantic caribbean saintJohn NA 18.32802 -64.80903 4 14.50000 14.50000 1686 1686
atlantic caribbean saintJohn NA 18.34744 -64.66539 3 15.60000 15.60000 1681 1681
atlantic caribbean saintJohn NA 18.36316 -64.77052 4 15.90000 15.90000 1669 1669
atlantic caribbean saintThomas NA 18.34082 -65.08269 3 16.00000 16.00000 1657 1657
atlantic caribbean saintThomas NA 18.34402 -64.98453 1 10.00000 10.00000 1142 1142
atlantic caribbean saintThomas NA 18.34435 -64.98433 5 10.00000 10.00000 1950 1950
atlantic caribbean saintThomas NA 18.38262 -64.97816 4 15.50000 15.50000 1650 1650
pacific marianas guam OCC-GUA-005 13.47516 144.86485 4 15.84883 15.84883 1142 1125
pacific marianas guam OCC-GUA-005 13.47520 144.86490 4 54.00000 54.00000 1813 1813
pacific marianas guam OCC-GUA-009 13.24126 144.70442 4 14.93447 14.93447 1161 1085
pacific marianas guam OCC-GUA-009 13.24210 144.70448 5 45.00000 45.00000 1808 1808
pacific marianas guam OCC-GUA-015 13.52894 144.80037 3 15.23926 15.23926 1158 1089
pacific marianas guam OCC-GUA-015 13.52896 144.80035 2 47.00000 47.00000 1804 1804
pacific marianas maug OCC-MAU-002 20.03567 145.22470 5 47.00000 47.00000 1840 1840
pacific marianas maug OCC-MAU-002 20.03570 145.22467 5 14.62969 14.62969 1142 1134
pacific marianas maug OCC-MAU-005 20.02033 145.23972 3 14.02012 14.02012 1135 1134
pacific marianas maug OCC-MAU-005 20.02039 145.23978 3 46.00000 46.00000 1836 1836
pacific marianas maug OCC-MAU-008 20.01312 145.20806 5 14.93447 14.93447 1143 1133
pacific marianas maug OCC-MAU-008 20.01315 145.20806 3 53.00000 53.00000 1834 1834
pacific marianas pagan OCC-PAG-002 18.16784 145.79495 5 14.62969 14.62969 1136 1136
pacific marianas pagan OCC-PAG-002 18.16788 145.79494 4 48.00000 48.00000 1877 1877
pacific marianas pagan OCC-PAG-006 18.09609 145.76488 4 51.00000 51.00000 1845 1845
pacific marianas pagan OCC-PAG-006 18.09612 145.76486 2 14.02012 14.02012 1137 1137
pacific marianas pagan OCC-PAG-009 18.04561 145.70621 5 51.00000 51.00000 1874 1874
pacific marianas pagan OCC-PAG-009 18.04564 145.70623 5 14.93447 14.93447 1139 1139
pacific marianas pagan OCC-PAG-013 18.12009 145.75469 5 46.00000 46.00000 1879 1879
pacific marianas pagan OCC-PAG-013 18.12014 145.75466 5 13.71533 13.71533 1150 1150
pacific marianas saipan OCC-SAI-005 15.25866 145.81569 4 15.23926 15.23926 1133 1130
pacific marianas saipan OCC-SAI-005 15.25867 145.81567 5 47.00000 47.00000 1800 1800
pacific marianas saipan OCC-SAI-009 15.09785 145.74337 4 15.84883 15.84883 1147 1138
pacific marianas saipan OCC-SAI-009 15.09788 145.74338 2 57.00000 57.00000 1767 1767
pacific marianas saipan OCC-SAI-012 15.15639 145.68976 2 41.00000 41.00000 1800 1800
pacific marianas saipan OCC-SAI-012 15.15645 145.68970 4 12.19141 12.19141 1127 1127
pacific middleHawaiianIslands oahu OCC-OAH-012 21.53412 -158.23441 1 12.80160 12.80160 1078 1078
pacific middleHawaiianIslands oahu OCC-OAH-012 21.59095 -158.17467 1 12.80160 12.80160 1078 1078
pacific pacificRemoteIslandArea jarvis OCC-JAR-003 -0.36896 -160.00813 3 49.00000 49.00000 1205 1205
pacific pacificRemoteIslandArea jarvis OCC-JAR-003 -0.36776 -159.97881 3 49.00000 49.00000 1208 1208

1.2 Parrot fish community

1.2.1 Summary

There are a total of 1225 parrot surveys included in this study. Sites are divided at three levels across 2 basins. The highest level (loc1) includes 8 large regions including:
florida, flowerGardenBanks, caribbean, marianas, middleHawaiianIslands, northwestHawaiianIslands, pacificRemoteIslandArea, samoa

1.2.2 Calculation of stats for parrot fish density and biomass

location
deployment
density
biomass
basin loc1 loc2 n meanDensity_ind_ha sdDensity_ind_ha seDensity_ind_ha meanBiomass_kg_ha sdBiomass_kg_ha seBiomass_kg_ha
atlantic caribbean puertoRico 87 325.34580 420.5386 45.08647 16.84333 24.91602 2.671277
atlantic caribbean saintCroix 105 465.16008 507.5089 49.52780 35.62523 40.61540 3.963657
atlantic caribbean saintJohn 49 929.32088 741.2058 105.88654 27.67571 29.57631 4.225187
atlantic caribbean saintThomas 38 1141.83765 2605.2740 422.63124 32.97925 44.43734 7.208688
atlantic florida dryTortugas 22 1003.43220 477.4532 101.79337 46.99733 70.25396 14.978194
atlantic florida keys 123 838.32736 857.1151 77.28346 81.55739 148.55909 13.395122
atlantic flowerGardenBanks flowerGardenBanks 41 212.89789 118.0199 18.43161 65.17329 42.91670 6.702463
pacific marianas guam 71 162.19358 161.8297 19.20566 35.17649 48.15764 5.715260
pacific marianas maug 62 205.36122 151.0224 19.17987 104.17208 95.41819 12.118122
pacific marianas pagan 47 211.90559 223.2471 32.56394 140.23714 146.76278 21.407552
pacific marianas saipan 56 219.28014 238.2128 31.83252 39.88110 91.49567 12.226623
pacific middleHawaiianIslands hawaii 59 103.58559 117.3219 15.27401 89.65356 189.93594 24.727553
pacific middleHawaiianIslands oahu 75 68.66062 107.2050 12.37896 23.34395 80.43737 9.288107
pacific northwestHawaiianIslands frenchFrigateShoals 63 258.24082 285.7798 36.00487 82.64512 141.73259 17.856628
pacific northwestHawaiianIslands pearlHermes 54 589.98672 656.2887 89.30958 109.03720 103.97793 14.149604
pacific pacificRemoteIslandArea jarvis 74 252.73614 265.9322 30.91399 187.76332 134.49823 15.635102
pacific pacificRemoteIslandArea palmyra 35 247.37225 142.3575 24.06281 98.90607 113.76370 19.229574
pacific pacificRemoteIslandArea wake 48 209.84874 227.5420 32.84287 81.03254 131.57821 18.991679
pacific samoa ofu 24 404.37145 399.4858 81.54470 226.07912 263.73687 53.835063
pacific samoa tau 27 137.27933 113.3681 21.81771 108.69679 124.77737 24.013417
pacific samoa tutuila 65 255.51850 238.7243 29.61010 88.91541 157.64428 19.553366

1.2.3 Number of parrot fish surveys by loc3

basin loc1 loc2 loc3 n
atlantic caribbean puertoRico culebra 11
atlantic caribbean puertoRico fajardo 29
atlantic caribbean puertoRico jobosBay 12
atlantic caribbean puertoRico laParguera 18
atlantic caribbean puertoRico rincon 17
atlantic caribbean saintCroix langBank 32
atlantic caribbean saintCroix saltRiver 37
atlantic caribbean saintCroix south 20
atlantic caribbean saintCroix spratHole 16
atlantic caribbean saintJohn johnsonsReef 13
atlantic caribbean saintJohn newfound 13
atlantic caribbean saintJohn stevenCay 10
atlantic caribbean saintJohn tektite 13
atlantic caribbean saintThomas brewersBay 12
atlantic caribbean saintThomas innerBrass 14
atlantic caribbean saintThomas sava 12
atlantic florida dryTortugas birdKeyReef 22
atlantic florida keys NA 123
atlantic flowerGardenBanks flowerGardenBanks eastBank 41
pacific marianas guam OCC-GUA-002 14
pacific marianas guam OCC-GUA-005 10
pacific marianas guam OCC-GUA-009 31
pacific marianas guam OCC-GUA-015 16
pacific marianas maug OCC-MAU-002 10
pacific marianas maug OCC-MAU-005 11
pacific marianas maug OCC-MAU-008 10
pacific marianas maug OCC-MAU-016 10
pacific marianas maug OCC-MAU-018 10
pacific marianas maug OCC-MAU-019 11
pacific marianas pagan OCC-PAG-002 14
pacific marianas pagan OCC-PAG-006 11
pacific marianas pagan OCC-PAG-009 12
pacific marianas pagan OCC-PAG-013 10
pacific marianas saipan OCC-SAI-002 11
pacific marianas saipan OCC-SAI-005 11
pacific marianas saipan OCC-SAI-009 10
pacific marianas saipan OCC-SAI-012 13
pacific marianas saipan OCC-SAI-016 11
pacific middleHawaiianIslands hawaii OCC-HAW-002 13
pacific middleHawaiianIslands hawaii OCC-HAW-008 10
pacific middleHawaiianIslands hawaii OCC-HAW-010 13
pacific middleHawaiianIslands hawaii OCC-HAW-014 13
pacific middleHawaiianIslands hawaii OCC-HAW-066 10
pacific middleHawaiianIslands oahu OCC-OAH-002 10
pacific middleHawaiianIslands oahu OCC-OAH-005 10
pacific middleHawaiianIslands oahu OCC-OAH-007 10
pacific middleHawaiianIslands oahu OCC-OAH-008 14
pacific middleHawaiianIslands oahu OCC-OAH-010 11
pacific middleHawaiianIslands oahu OCC-OAH-012 10
pacific middleHawaiianIslands oahu OCC-OAH-014 10
pacific northwestHawaiianIslands frenchFrigateShoals OCC-FFS-002 16
pacific northwestHawaiianIslands frenchFrigateShoals OCC-FFS-004 16
pacific northwestHawaiianIslands frenchFrigateShoals OCC-FFS-007 11
pacific northwestHawaiianIslands frenchFrigateShoals OCC-FFS-010 10
pacific northwestHawaiianIslands frenchFrigateShoals OCC-FFS-014 10
pacific northwestHawaiianIslands pearlHermes OCC-PHR-002 11
pacific northwestHawaiianIslands pearlHermes OCC-PHR-007 11
pacific northwestHawaiianIslands pearlHermes OCC-PHR-012 11
pacific northwestHawaiianIslands pearlHermes OCC-PHR-016 21
pacific pacificRemoteIslandArea jarvis OCC-JAR-003 28
pacific pacificRemoteIslandArea jarvis OCC-JAR-008 20
pacific pacificRemoteIslandArea jarvis OCC-JAR-013 26
pacific pacificRemoteIslandArea palmyra OCC-PAL-003 10
pacific pacificRemoteIslandArea palmyra OCC-PAL-008 10
pacific pacificRemoteIslandArea palmyra OCC-PAL-017 15
pacific pacificRemoteIslandArea wake OCC-WAK-002 13
pacific pacificRemoteIslandArea wake OCC-WAK-005 11
pacific pacificRemoteIslandArea wake OCC-WAK-008 10
pacific pacificRemoteIslandArea wake OCC-WAK-013 14
pacific samoa ofu OCC-OFU-002 11
pacific samoa ofu OCC-OFU-009 13
pacific samoa tau OCC-TAU-002 15
pacific samoa tau OCC-TAU-011 12
pacific samoa tutuila OCC-TUT-002 11
pacific samoa tutuila OCC-TUT-007 25
pacific samoa tutuila OCC-TUT-017 19
pacific samoa tutuila OCC-TUT-022 10

1.2.4 Graph parrot biomass vs. density

Combine bar stats and parrot community stats tables

Mean parrot biomass_kg_ha vs parrot density_ind_ha

1.3 Map of BAR and parrot surveys

1.4 QA/QC of BAR data

1.4.1 deltaMass_mgcm2y

List tags where deltaMass_mgcm2y = “NA”:

## numeric(0)

Historgram of deltaMass_mgcm2y values

1.4.2 deltaVolume_mm3cm2y

List tags where deltaVolume_mm3cm2y = “NA”:

##  [1] 2178 2181 2182 2183 2184 1321 1322 1323 1324 1325 4860 4861 4862 4863 4864
## [16] 4865 4866 4867 4869 4875 4877 4878 4870 4871 4872 4873 4881 4882 4883 4885
## [31] 4886 4887 4888 4889 4890 4891 4892 4893 4894 4896 4897 4898 4899 3229 4723
## [46] 3263 3233

Historgram of deltaVolume_mm3cm2y values

1.4.3 deltaDensity_mgcm3cm2y

List tags where deltaDensity_mgcm3cm2y = “NA”:

##   [1] 4981 4982 4983 4984 4985 4980 1321 1322 1323 1324 1325 4860 4861 4862 4863
##  [16] 4864 4865 4866 4867 4869 4875 4877 4878 4870 4871 4872 4873 4881 4882 4883
##  [31] 4885 4886 4887 4888 4889 4890 4891 4892 4893 4894 4896 4897 4898 4899 1054
##  [46] 1058 1032 1033 1044 1064 1076 1079 1089 1090 1096 3229 1074 1005 1081 1003
##  [61] 1004 1082 1008 1045 1083 1084 1085 1086 1087 3245 3247 1018 1021 1023 1024
##  [76] 1025 1026 1027 1012 1013 1015 1016 1019 1001 1002 1009 1010 1011 4723 3263
##  [91] 1051 1052 1055 1060 1034 1043 1046 1048 1053 1065 1028 1030 1031 1035 3233
## [106] 1080 1088 1091 1233 1094 1097 1231 1066 1067 1068 1069 1078 1093 1099 1232

Historgram of deltaDensity_mgcm3cm2y values

1.4.4 macroboring_mm3cm2y

List tags where macroboring_mm3cm2y = “NA”:

## [1] 4925 4918 4922 6526 6530

Historgram of macroboring_mm3cm2y values

1.4.5 grazing_mm3cm2y

List tags where grazing_mm3cm2y = “NA”:

##  [1] 2178 2181 2182 2183 2184 4925 4918 4922 1321 1322 1323 1324 1325 4860 4861
## [16] 4862 4863 4864 4865 4866 4867 4869 4875 4877 4878 4870 4871 4872 4873 4881
## [31] 4882 4883 4885 4886 4887 4888 4889 4890 4891 4892 4893 4894 4896 4897 4898
## [46] 4899 6526 6530 3229 4723 3263 3233

List tags where grazing_mm3cm2y > 0 and list of those values:

##  [1] 1058 1032 1044 1003 1045 1018 1021 3252 1046 3239 3243 3209
##  [1] 1.9166975 1.9034783 3.1911669 0.6138478 3.2214810 3.7476191 0.8993853
##  [8] 6.9731866 5.9639811 1.1439126 0.6225441 3.9642291

Historgram of grazing_mm3cm2y values Create grazing specific datasets for subsequent analysis by removing St. Thomas and French Frigate Shoals

1.4.6 accretion_mm3cm2y

List tags where accretion_mm3cm2y = “NA”:

## numeric(0)

Historgram of accretion_mm3cm2y values

1.5 Volume vs. Mass

Plot of deltaVolume_mm3cm2y vs. deltaMass_mgcm2y:

1.6 Influence of duration

2 Global spatial analysis

2.1 deltaMass_mgcm2y

deltaMass_mgcm2y boxplots by region and subregion

2.2 deltaVolume_mm3cm2y

deltaVolume_mm3cm2y boxplots by region and subregion

2.3 deltaDensity_mgcm3cm2y

deltaDensity_mgcm3cm2y boxplots by region and subregion

2.4 macroboring_mm3cm2y

Macroboring boxplots by region and subregion

2.5 grazing_mm3cm2y

Grazing boxplots by region and subregion CHECK THIS YO *Note that the initial volumes are missing for some USVI and PR data, thereby removing some of those grazing values.

2.6 accretion_mm3cm2y

Accretion boxplots by region and subregion

3 Florida Keys regional analysis

3.1 Florida Keys summary statistics

Creates Keys-specific data sets for subsequent analysis
location
deployment
depth
deltaMass
deltaVolume
deltaDensity
macroboring
grazing
accretion
keysRegion shelf loc3 maxDays minDays n maxDepth minDepth meanDepth meanDeltaMass sdDeltaMass seDeltaMass meanDeltaVolume sdDeltaVolume seDeltaVolume meanDeltaDensity sdDeltaDensity seDeltaDensity meanMacroboring sdMacroboring seMacroboring meanGrazing sdGrazing seGrazing meanAccretion sdAccretion seAccretion
lower inshore LKI1 2373 2373 9 3.0 3.0 3.000000 10.361135 35.44609 11.815364 -22.80021 11.97020 3.990068 0.5289171 0.2887309 0.0962436 -1.817063 1.321774 0.4405914 -20.98314 11.775653 3.925218 24.930835 15.636689 5.212230
lower inshore LKI2 2373 2373 8 6.5 6.5 6.500000 1.280900 18.79885 6.646398 -17.50157 9.81962 3.471760 0.6417772 0.4532643 0.1602531 -4.716475 1.788821 0.6324438 -12.78509 9.437559 3.336681 11.833579 6.671763 2.358824
lower offshore LKO1 2373 2373 10 5.0 5.0 5.000000 6.135886 36.19829 11.446905 -23.84073 15.32798 4.847133 1.0353468 0.5350617 0.1692014 -2.146591 1.527185 0.4829383 -21.69414 15.499462 4.901360 16.732759 13.202196 4.174901
lower offshore LKO2 2373 956 19 7.0 7.0 7.000000 26.520743 43.36028 9.947531 -19.88798 25.73623 5.904296 0.4797067 3.7171963 0.8527833 -5.260933 11.579947 2.6566221 -14.62704 22.420735 5.143669 26.154190 12.945011 2.969789
middle inshore MKI1 1375 1005 18 3.5 3.5 3.500000 31.244412 41.71779 9.832978 -19.59640 13.81567 3.256385 1.4907591 0.4953560 0.1167565 -5.119792 10.711839 2.5248047 -14.47661 7.830856 1.845750 30.878246 16.969884 3.999840
middle inshore MKI2 1375 1005 20 5.0 5.0 5.000000 -23.028111 56.64800 12.666878 -41.32688 30.02046 6.712780 1.4896983 0.5697631 0.1274029 -4.199189 5.167457 1.1554786 -37.12769 29.395714 6.573081 12.203606 11.034333 2.467352
middle offshore MKO1 1375 1005 13 6.0 6.0 6.000000 35.378293 38.30866 10.624910 -26.89076 24.78167 6.873199 1.7485001 0.5707004 0.1582838 -2.304415 2.949138 0.8179436 -24.58635 24.557364 6.810987 32.337094 9.900724 2.745967
middle offshore MKO2 1375 1005 18 5.0 5.0 5.000000 27.409365 31.45449 7.413893 -24.37483 19.11061 4.504414 1.7735983 0.6059954 0.1428345 -2.592509 2.655999 0.6260249 -21.78232 17.299380 4.077503 26.525859 7.721317 1.819932
upper inshore UKI2 1350 1100 19 5.0 3.0 3.947368 -40.949042 46.04103 10.562536 -49.56048 32.79049 7.522655 1.3968060 0.6932070 0.1590326 -4.277708 6.178880 1.4175324 -45.28277 32.574676 7.473143 7.226374 8.574051 1.967022
upper inshore cheecaRocks 1379 1100 24 5.0 5.0 5.000000 -4.421357 47.51464 9.698885 NA NA NA 0.8816427 1.1941415 0.2437531 NA NA NA NA NA NA 17.727045 14.334786 2.926076
upper offshore UKO1 1357 1100 18 15.0 14.0 14.555556 13.591936 23.36632 5.507494 -32.58831 21.44672 5.055041 1.4816143 0.6639830 0.1565023 -2.378907 2.101430 0.4953118 -30.20940 21.832400 5.145946 23.819134 10.862960 2.560424
upper offshore UKO3 1358 1100 18 15.0 6.5 13.750000 1.851690 26.88180 6.336101 -23.70842 15.32884 3.613043 0.4649988 2.4587397 0.5795305 -3.528022 3.639948 0.8579440 -20.18040 13.843124 3.262856 17.398527 6.310720 1.487451

3.2 Influence of duration

3.3 Keys-wide spatial analysis

4 Exploration of grazing

Note: need to use datasets where all St. Thomas and all French Frigate Shoals data have been removed because of replication These are allBarData_grazingAnalysis, siteBarStats_grazingAnalysis, and grazingParrotStats_grazingAnalysis

4.1 Grazing vs. BAR data

4.1.1 Grazing vs. mass change

grazing_mm3cm2y vs. deltaMass_mgcm2y mean grazing_mm3cm2y vs. mean deltaMass_mgcm2y

4.1.2 Grazing vs. volume change

grazing_mm3cm2y vs. deltaVolume_mm3cm2y mean grazing_mm3cm2y vs. mean deltaVolume_mm3cm2y

4.1.3 Grazing vs. density change

grazing_mm3cm2y vs. deltaDensity_mgcm3cm2y mean grazing_mm3cm2y vs. mean deltaDensity_mgcm3cm2y

4.1.4 Grazing vs. macroboring

grazing_mm3cm2y vs. macroboring_mm3cm2y mean grazing_mm3cm2y vs. mean macroboring_mm3cm2y

4.1.5 Grazing vs. accretion

grazing_mm3cm2y vs. accretion_mm3cm2y mean grazing_mm3cm2y vs. mean accretion_mm3cm2y

4.2 Grazing rates vs parrot community

4.2.1 Grazing vs parrot biomass

Mean grazing vs parrot biomass_kg_ha

4.2.2 Grazing vs parrot density

Mean grazing vs parrot density_ind_ha