Spatial_Transcriptomics_Experiment_Qiu_Dai

Collaborative Work Between Qiu and DAI lab, UA COM-Phoenix

Visium HD first experiment. 8um bin size. Visium HD is released by TXG in April 2024. Clustered cells overlay on tissue image. Photoshop filter for artistic rendering.

For our second Visium HD experiment, tissue layout on A1 chip area

For our second Visium HD experiment, tissue layout on D1 chip area

Unsupervised clustering… Look at the detected spots that are spot on cell soma!! Amazing precision…

unsupervised clustering

This Pvalb+ parvalbumin-expression interneurons, cellular resolution

These are Acan-expressing spots for the same field of view as above image.

Note Acan+ spot colocalize with Pvalb expressing spots!