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# List of packages
packages <- c("tidyverse", "infer", "fst", "modelsummary", "effects", "survey", "MASS", "aod", "interactions", "kableExtra", "flextable", "scales") # add any you need here

# Install packages if they aren't installed already
new_packages <- packages[!(packages %in% installed.packages()[,"Package"])]
if(length(new_packages)) install.packages(new_packages)

# Load the packages
lapply(packages, library, character.only = TRUE)
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getwd()
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#Task 1 #Use data for Germany and the variable coding for model3 and model4 from the tutorial (i.e., both for the cleaning & recode, as well as the linear model formulas). Do a modelsummary table displaying both model outputs. Interpret the coefficients for the MLR without the interaction (i.e., the first displayed model), and interpret model fit metrics for both models.

germany_data <- read_fst("germany_data.fst")
df <- germany_data
# Setting values greater than 10 to NA
df$trstplt <- ifelse(df$trstplt > 10, NA, df$trstplt)
df$trstprl <- ifelse(df$trstprl > 10, NA, df$trstprl)
df$trstprt <- ifelse(df$trstprt > 10, NA, df$trstprt)

# Creating and rescaling the trust variable
df$trust <- scales::rescale(df$trstplt + df$trstprl + df$trstprt, na.rm = TRUE, to = c(0, 100))

# Here's how you would "flip it" because populist is conceived by N + I as 'anti-trust'
# As Schafer explains there are some issues with that conceptualization, but N + I is also widely applied
df$populist <- scales::rescale(df$trust, na.rm = TRUE, to=c(100,0))
df <- df %>%
  mutate(
    cohort = ifelse(yrbrn < 1930 | yrbrn > 2000, NA, yrbrn),
    # Recoding generational cohorts based on the year of birth (yrbrn).
    # The year of birth is categorized into different generational cohorts.
    # Interwar (1900-1945), Baby Boomers (1946-1964), Gen X (1965-1979), Millennials (1980-1996).
    # The 'TRUE' line is a catch-all that keeps the original year of birth for those not in these ranges.
    gen = case_when(
      yrbrn %in% 1900:1945 ~ "1",
      yrbrn %in% 1946:1964 ~ "2",
      yrbrn %in% 1965:1979 ~ "3",
      yrbrn %in% 1980:1996 ~ "4",
      TRUE ~ as.character(yrbrn)  
    ),
    # After recoding, the gen variable is converted into a factor with labels for clearer interpretation.
    # Factors are used in R to handle categorical variables.
    gen = factor(gen,
                 levels = c("1", "2", "3", "4"),
                 labels = c("Interwar", "Baby Boomers", "Gen X", "Millennials"))
  )
table(df$gen)
## 
##     Interwar Baby Boomers        Gen X  Millennials 
##         6373        11474         7648         6704
# The dataframe is further updated to recode trust and political interest # note: you could have done it one, integrating above, but I broke it down
df <- df %>%
  mutate(
    # Recoding the 'ppltrst' variable, which seems to measure trust on a scale from 0 to 10.
    # Special codes like 77, 88, 99 are probably used for missing data and are set to NA.
    # Trust levels are categorized as 'Low', 'Mid', and 'High'.
    Capital = case_when(
      ppltrst %in% c(77, 88, 99) ~ NA_character_,
      ppltrst >= 0 & ppltrst <= 3 ~ "Low",
      ppltrst >= 4 & ppltrst <= 6 ~ "Mid",
      ppltrst >= 7 & ppltrst <= 10 ~ "High",
      TRUE ~ as.character(ppltrst)
    ),
    # Recoding 'polintr' variable, which seems to measure political interest.
    # Values of 1 and 2 indicate 'Interested', 3 and 4 'Not Interested'.
    # Special codes like 7, 8, 9 (likely missing data) are set to NA.
    Politically = case_when(
      polintr %in% c(1, 2) ~ "Interested",
      polintr %in% c(3, 4) ~ "Not Interested",
      polintr %in% c(7, 8, 9) ~ NA_character_
    )
  )
df <- df %>%
  mutate(behave = ipbhprp,
         secure = impsafe,
         safety = ipstrgv,
         tradition = imptrad,
         rules = ipfrule) %>%
  mutate(across(c("behave", "secure", "safety", "tradition", "rules"),
                ~ na_if(.x, 7) %>% na_if(8) %>% na_if(9))) %>%
  # Apply the reverse coding
  mutate(across(c("behave", "secure", "safety", "tradition", "rules"), ~ 7 - .x ))

# Now you can calculate 'schwartzauth' after the NA recoding
df$auth <- scales::rescale(df$behave + 
                      df$secure + 
                      df$safety + 
                      df$tradition + 
                      df$rules, to=c(0,100), na.rm=TRUE)


df <- df %>% filter(!is.na(auth))
df <- df %>%
  mutate(
    polID = case_when(
      lrscale %in% 0:3 ~ "Left",                    
      lrscale %in% 7:10 ~ "Right",                  
      lrscale %in% 4:6 ~ "Moderate",                
      lrscale %in% c(77, 88, 99) ~ NA_character_      
    ),
   religious = case_when(
      rlgdgr %in% c(77, 88, 99) ~ NA_real_,
      TRUE ~ rlgdgr
    )
  )
model3 <- lm(auth ~ polID + religious, data = df, weights = weight)
model4 <- lm(auth ~ polID + religious + polID*religious, data = df, weights = weight)
modelsummary(
  list(model3, model4),
  fmt = 1,
  estimate  = c( "{estimate} ({std.error}){stars}",
                "{estimate} ({std.error}){stars}"),
  statistic = NULL)
 (1)   (2)
(Intercept) 57.5 (0.7)*** 59.6 (0.9)***
polIDModerate 5.3 (0.7)*** 2.6 (1.1)*
polIDRight 9.3 (1.1)*** 3.4 (1.9)+
religious 0.3 (0.1)** −0.3 (0.2)+
polIDModerate × religious 0.8 (0.2)**
polIDRight × religious 1.5 (0.4)***
Num.Obs. 2855 2855
R2 0.035 0.041
R2 Adj. 0.034 0.039
AIC 24680.0 24665.5
BIC 24709.7 24707.2
Log.Lik. −12334.978 −12325.764
RMSE 17.13 17.13

Interpreting coefficients for MLR without the interaction: polIDModerate (5.3): This coefficient suggests that, comparing individuals with the same religiousness (i.e., what some term “holding constant”), the average outcome for individuals identifying as politically moderate are 5.3 units higher compared to the reference category (in our case, identifying ideologically as on the ‘left’). The “baseline group” refers to the category that is omitted, and is thus interpreted as part of our intercept.

polIDRight (9.3): This coefficient indicates that, comparing individuals with the same religiousness, individuals identifying as politically right are expected to be, on average, 9.3 units higher than the reference category (i.e., identifying ideologically as on the ‘left’) on the authoritarian values scale.

religious (0.3): For the ‘religious’ predictor, a coefficient of 0.6 means that with every one-unit increase in religiousness, there is an associated expected average increase of 0.3 units on the authoritarian values scale, assuming that we are comparing people with the same ideological categorization (i.e., holding ideological self-placement constant).

polIDModerate and polIDRight have *** and religious has *, all indicating a p < 0.001. Meaning: There is less than a 0.1% probability that the observed result is due to chance and we incorrectly reject the null, under frequentist assumptions.

#Task 2 #Now generate the model4 interaction plot that we did in the tutorial, but again using the German data instead of the French. Interpret.

interaction_plot <- effect("polID*religious", model4, na.rm=TRUE)

plot(interaction_plot,
     main="Interaction effect",
     xlab="Religiousness",
     ylab="Authoritarian attitudes scale")

interaction_plot
## 
##  polID*religious effect
##           religious
## polID             0        2        5        8       10
##   Left     59.61010 58.93398 57.91980 56.90562 56.22950
##   Moderate 62.21299 63.14317 64.53843 65.93370 66.86388
##   Right    63.00456 65.26702 68.66072 72.05442 74.31689

Interpreation: pollD = Left: I notice that as people increase in their religiousness, their authoriatian attidues decrease. In contrast pollD = right, the more people increase in their religiousness, the high their authoritatiran attitudes also get. Lastly, pollD = moderate, is similar to pollD = right because it is also an increase except it is less substantial than the right. The slope for moderate is smaller. Lastly, the lines are not parallel, therefore there is an interaction effect. Meaning that all three variables will interact.

#Task 3 #Use data for the Netherlands and the variable coding for model5 and model6 from the tutorial (i.e., both for the cleaning & recode, as well as the linear model formulas). Do a modelsummary table displaying both model outputs. Interpret the coefficients for the MLR without the interaction (i.e., the first displayed model), and interpret model fit metrics for both models.

netherlands_data <- read_fst("netherlands_data.fst")
df <- netherlands_data
# Setting values greater than 10 to NA
df$trstplt <- ifelse(df$trstplt > 10, NA, df$trstplt)
df$trstprl <- ifelse(df$trstprl > 10, NA, df$trstprl)
df$trstprt <- ifelse(df$trstprt > 10, NA, df$trstprt)

# Creating and rescaling the trust variable
df$trust <- scales::rescale(df$trstplt + df$trstprl + df$trstprt, na.rm = TRUE, to = c(0, 100))

# Here's how you would "flip it" because populist is conceived by N + I as 'anti-trust'
# As Schafer explains there are some issues with that conceptualization, but N + I is also widely applied
df$populist <- scales::rescale(df$trust, na.rm = TRUE, to=c(100,0))
df <- df %>%
  mutate(
    cohort = ifelse(yrbrn < 1930 | yrbrn > 2000, NA, yrbrn),
    # Recoding generational cohorts based on the year of birth (yrbrn).
    # The year of birth is categorized into different generational cohorts.
    # Interwar (1900-1945), Baby Boomers (1946-1964), Gen X (1965-1979), Millennials (1980-1996).
    # The 'TRUE' line is a catch-all that keeps the original year of birth for those not in these ranges.
    gen = case_when(
      yrbrn %in% 1900:1945 ~ "1",
      yrbrn %in% 1946:1964 ~ "2",
      yrbrn %in% 1965:1979 ~ "3",
      yrbrn %in% 1980:1996 ~ "4",
      TRUE ~ as.character(yrbrn)  
    ),
    # After recoding, the gen variable is converted into a factor with labels for clearer interpretation.
    # Factors are used in R to handle categorical variables.
    gen = factor(gen,
                 levels = c("1", "2", "3", "4"),
                 labels = c("Interwar", "Baby Boomers", "Gen X", "Millennials"))
  )
table(df$gen)
## 
##     Interwar Baby Boomers        Gen X  Millennials 
##         3967         6359         4684         2803
# The dataframe is further updated to recode trust and political interest # note: you could have done it one, integrating above, but I broke it down
df <- df %>%
  mutate(
    # Recoding the 'ppltrst' variable, which seems to measure trust on a scale from 0 to 10.
    # Special codes like 77, 88, 99 are probably used for missing data and are set to NA.
    # Trust levels are categorized as 'Low', 'Mid', and 'High'.
    Capital = case_when(
      ppltrst %in% c(77, 88, 99) ~ NA_character_,
      ppltrst >= 0 & ppltrst <= 3 ~ "Low",
      ppltrst >= 4 & ppltrst <= 6 ~ "Mid",
      ppltrst >= 7 & ppltrst <= 10 ~ "High",
      TRUE ~ as.character(ppltrst)
    ),
    # Recoding 'polintr' variable, which seems to measure political interest.
    # Values of 1 and 2 indicate 'Interested', 3 and 4 'Not Interested'.
    # Special codes like 7, 8, 9 (likely missing data) are set to NA.
    Politically = case_when(
      polintr %in% c(1, 2) ~ "Interested",
      polintr %in% c(3, 4) ~ "Not Interested",
      polintr %in% c(7, 8, 9) ~ NA_character_
    )
  )
df <- df %>%
  mutate(behave = ipbhprp,
         secure = impsafe,
         safety = ipstrgv,
         tradition = imptrad,
         rules = ipfrule) %>%
  mutate(across(c("behave", "secure", "safety", "tradition", "rules"),
                ~ na_if(.x, 7) %>% na_if(8) %>% na_if(9))) %>%
  # Apply the reverse coding
  mutate(across(c("behave", "secure", "safety", "tradition", "rules"), ~ 7 - .x ))

# Now you can calculate 'schwartzauth' after the NA recoding
df$auth <- scales::rescale(df$behave + 
                      df$secure + 
                      df$safety + 
                      df$tradition + 
                      df$rules, to=c(0,100), na.rm=TRUE)


df <- df %>% filter(!is.na(auth))
df <- df %>%
  mutate(
    polID = case_when(
      lrscale %in% 0:3 ~ "Left",                    
      lrscale %in% 7:10 ~ "Right",                     
      lrscale %in% 4:6 ~ "Moderate",                  
      lrscale %in% c(77, 88, 99) ~ NA_character_      
    ),
   religious = case_when(
      rlgdgr %in% c(77, 88, 99) ~ NA_real_,
      TRUE ~ rlgdgr
    )
  )
df <- df %>%
  mutate(religion = case_when(
    rlgblg == 2 ~ "No",
    rlgblg == 1 ~ "Yes",
    rlgblg %in% c(7, 8, 9) ~ NA_character_,
    TRUE ~ as.character(rlgblg)
  ))

# check
table(df$religion)
## 
##    No   Yes 
## 10913  6750
df <- df %>%
  mutate(ID = case_when(
    lrscale >= 0 & lrscale <= 4 ~ "Left",
    lrscale >= 6 & lrscale <= 10 ~ "Right",
    lrscale > 10 ~ NA_character_,  # Set values above 10 as NA
    TRUE ~ NA_character_  # Ensure value 5 and any other unexpected values are set as NA
  ))
table(df$ID)
## 
##  Left Right 
##  5449  7010
model5 <- lm(auth ~ religion + ID + gen, data = df, weights = weight)
model6 <- lm(auth ~ religion + ID + gen + religion*gen, data = df, weights = weight)
modelsummary(
  list(model5, model6),
  fmt = 1,
  estimate  = c( "{estimate} ({std.error}){stars}",
                "{estimate} ({std.error}){stars}"),
  statistic = NULL,
  coef_omit = "Intercept")
 (1)   (2)
religionYes 8.2 (0.9)*** 7.5 (2.1)***
IDRight 3.4 (0.9)*** 3.4 (0.9)***
genBaby Boomers −5.8 (1.3)*** −6.5 (1.7)***
genGen X −7.3 (1.4)*** −7.6 (1.8)***
genMillennials −8.6 (1.5)*** −8.6 (1.9)***
religionYes × genBaby Boomers 1.6 (2.6)
religionYes × genGen X 0.5 (2.8)
religionYes × genMillennials −0.6 (3.2)
Num.Obs. 1147 1147
R2 0.126 0.127
R2 Adj. 0.123 0.121
AIC 9479.3 9484.5
BIC 9514.7 9535.0
Log.Lik. −4732.669 −4732.251
RMSE 14.94 14.94

Interpreation: religionYes (8.2): This coefficient suggests that, comparing individuals with the same political leaning, the average outcome for individuals with religions are 8.2 units higher compared to the reference category (in this case, identifying ideologically as on the ‘left’ and without religion).

IDRight (3.4): This coefficient indicates that, comparing individuals with the same religiousness, individuals identifying as politically right are expected to be, on average, 3.4 units higher than the reference category on the authoritarian values scale.

genBaby Boomers (-5.8): Compared to the reference category, Baby Boomers present scores that are, on average, 5.8 points lower on the authoritarian values scale (0-100).

genGen X (-7.3): Generation X shows an even more pronounced decrease, with scores 7.3 points lower than the reference category on the authoritarian values scale.

genMillennials (-8.6): Millennials exhibit the largest decrease in authoritarian values, with their scores being 8.6 points lower than the reference category. This marked difference is statistically significant, indicating that Millennials diverge most strongly from those who lean politically left in comparing their authoritarian values.

All the coefficients are significant with ***, indicating a p < 0.001. Meaning: There is less than a 0.1% probability that the observed result is due to chance and we incorrectly reject the null, under the frequentist assumptions.

#Task 4 #Produce the model7 interaction plot from the tutorial, but again using the Netherlands data. Interpret.

model7 <- lm(auth ~ + cohort + polID + cohort*polID, data = df, weights = weight)
interact_plot(model7, pred = cohort, modx = polID, jnplot = TRUE)

Interpretation: I notice that pollD left and right are going in the same direction with almost the same slope however, right is decreasing at a much steeper slope. Also, they start at different authoritarian levels. Left starts at the lowest at around 60, moderate at second at around 68, and right the highest at around 78. They are all decreasing in auth as cohort increases.For pollD left, the coded generations in authoritarian is the smallest while it is the largest for pollD right. Lastly, those who lean politically left are showing the greatest variance in authoritarian attitude scales.

#Task 5 #Produce the model8 interaction plot from the tutorial, but again using the Netherlands data. Interpret.

model8 <- lm(auth ~ religious + ID + religious*ID, data = df, weights = weight)
interact_plot(model8, pred = religious, modx = ID, jnplot = TRUE)

Interpretation: I notice that ID left starts at 55 while IDright starts at 60. They both are increasing auth as they increase in religion. lastly their slopes are also quite similar as they both seem to be going at the same rate however, left is a bit steeper.