library(pubmedR)## Warning: 程辑包'pubmedR'是用R版本4.2.3 来建造的api_key = NULL
# pubmed
query = '("Bioinformatics (Oxford, England)"[Journal]) AND (("1998"[Date - Publication] : "1998"[Date - Publication]))'
res <- pmQueryTotalCount(query = query, api_key = api_key)
D1 <- pmApiRequest(query = query, limit = res$total_count, api_key = NULL)## Documents 131 of 131#D1
query = '("Bioinformatics (Oxford, England)"[Journal]) AND (("1999"[Date - Publication] : "1999"[Date - Publication]))'
res <- pmQueryTotalCount(query = query, api_key = api_key)
D2 <- pmApiRequest(query = query, limit = res$total_count, api_key = NULL)## Documents 145 of 145m1 = pmApi2df(D1)## ================================================================================m2 = pmApi2df(D2)## ================================================================================m = rbind(m1, m2)
#View(m)
df <- m
df = df[df$DT == "JOURNAL ARTICLE", ]
fa = gsub(";.*$", "", df$AF)
sort(table(fa))## fa
## ACKERMANN, F ALLEX, C F AN, J
## 1 1 1
## ANDERSON, I BABENKO, V N BACKOFEN, R
## 1 1 1
## BAILEY, T L BAKER, P G BARILLOT, E
## 1 1 1
## BELLGARD, M I BENTZ, J BERIKOV, V B
## 1 1 1
## BLAKE, R D BOHNE, A BOUTHINON, D
## 1 1 1
## BOYLE, J BRUN-SAMARCQ, L BRUSIC, V
## 1 1 1
## BUCKA-LASSEN, K BURGLIN, TR BUSHNELL, S
## 1 1 1
## CARIASO, M CHAO, K M CHARLESTON, M A
## 1 1 1
## CHAU, F T CHEN, C C CHEUNG, K H
## 1 1 1
## CHOU, A CHUZHANOVA, N A COMERON, J M
## 1 1 1
## CONERY, J CONSALEZ, G G CORPET, F
## 1 1 1
## COUPAYE, T CRAWFORD, O H CUFF, J A
## 1 1 1
## DANDEKAR, T DI FRANCESCO, V DLAKIC, M
## 1 1 1
## DRABL酶S, F ECKMAN, B A EDDY, S R
## 1 1 1
## EISENHABER, F EVERS, D FENY枚, D
## 1 1 1
## FERLANTI, E S FISCHER, D FISCHER, S
## 1 1 1
## FLEISCHMANN, W FORSTER, M FRISHMAN, D
## 1 1 1
## GERSTEIN, M GILBERT, D GIUDICELLI, V
## 1 1 1
## GON莽ALVES, I GOODMAN, N GORODKIN, J
## 1 1 1
## GORYANIN, I GOTO, S GOUET, P
## 1 1 1
## GOUJON, C P GRIGORIEV, A GUERMEUR, Y
## 1 1 1
## GUSEV, V D HAMPE, J HAN, K
## 1 1 1
## HANKE, J HARLEY, E HEIDTKE, K R
## 1 1 1
## HENIKOFF, S HERMJAKOB, H HERN谩NDEZ, A
## 1 1 1
## HERTZ, G Z HERZEL, H HIROKAWA, T
## 1 1 1
## HU, J HUBER, T HUSON, D H
## 1 1 1
## JU, L W JUNGFER, K JUNKER, V L
## 1 1 1
## KALLBERG, Y KARCHIN, R KASPRZAK, W
## 1 1 1
## KEL, A KLEFFE, J KNUDSEN, B
## 1 1 1
## KNUDSEN, S KOCHETOV, A V KOLCHANOV, N A
## 1 1 1
## KRAEMER, E T KRAUSE, A KURTZ, S
## 1 1 1
## KYRPIDES, N C LABESSE, G LADUNGA, I
## 1 1 1
## LANZAVECCHIA, S LASCARIS, R F LAVORGNA, G
## 1 1 1
## LENHOF, H P LESER, U LEVIN, S
## 1 1 1
## LEVITSKY, V G LEVY, S LIN, W J
## 1 1 1
## LINDENBAUM, P LIU, J S LI貌, P
## 1 1 1
## LUKASHIN, A V LYNGS酶, R B MACAULEY, J
## 1 1 1
## MALLIAVIN, T E MALLIOS, R R MALTCHENKO, S Z
## 1 1 1
## MANGAN, M E MCGUIRE, G MCINERNEY, J O
## 1 1 1
## MENDES, P MENDOZA, L MILANESI, L
## 1 1 1
## MIZUGUCHI, K MORGENSTERN, B MUCCHIELLI-GIORGI, M H
## 1 1 1
## MURAKAMI, K MURVAI, J M茅DIGUE, C
## 1 1 1
## NADKARNI, P NAKATA, K NEWELL, W
## 1 1 1
## O'DONOVAN, C OHLER, U OKAYAMA, T
## 1 1 1
## OLIVER, J L PARBHANE, R V PARK, J
## 1 1 1
## PASQUIER, CM PAZOS, F PEGG, S C
## 1 1 1
## PESHKIN, L PFEIFFER, T PICKERT, L
## 1 1 1
## POCOCK, M R PODLICH, D W PONOMAREV, A L
## 1 1 1
## POOK, S POSADA, D PROUTSKI, V
## 1 1 1
## RAMPONE, S RAREY, M REBHAN, M
## 1 1 1
## REDDY, B V REDDY, V S RIGOUTSOS, I
## 1 1 1
## RIIKONEN, P RIMER, M RODRIGUEZ-TOM茅, P
## 1 1 1
## ROGNES, T ROZAS, J SALAMOV, A A
## 1 1 1
## SANKOFF, D SAQI, M A SCH盲FFER, A A
## 1 1 1
## SCORDIS, P SELBIG, J SELUJA, G A
## 1 1 1
## SENGER, M SEROV, V N SHATS, O
## 1 1 1
## SNEATH, P H SOBOLEV, V SODERLUND, C
## 1 1 1
## SOUTHERN, M R SPANG, R SRINIVASARAO, G Y
## 1 1 1
## STOYE, J SZE, S H S谩NCHEZ, R
## 1 1 1
## TABASKA, J E TAMAMES, J TARNAS, C
## 1 1 1
## TATUSOVA, T A TAYLOR, S THIEFFRY, D
## 1 1 1
## THOMAS, G H THOMPSON, J D TH茅BAULT, P
## 1 1 1
## TOMITA, M TRELLES, O TSUNODA, T
## 1 1 1
## ULIEL, S VARR茅, J S WAGNER, A
## 1 1 1
## WANG, H C WEI, T WEISSIG, H
## 1 1 1
## WJST, M WORLEY, K C WRIGHT, W
## 1 1 1
## WU, C H WUJU, L YAN, M
## 1 1 1
## YUAN, J YUAN, Y P ZHANG, C T
## 1 1 1
## ZHANG, Z ZIMMER, R ACHARD, F
## 1 1 2
## ANDRADE, M A BALDI, P BROWN, N P
## 2 2 2
## COWARD, E ELLIS, L B GRACY, J
## 2 2 2
## IAZZETTI, G KOLPAKOV, F A MOTT, R
## 2 2 2
## PONOMARENKO, M P YADA, T ZHU, J
## 2 2 2#View(data.frame(fa))
table(fa)## fa
## ACHARD, F ACKERMANN, F ALLEX, C F
## 2 1 1
## AN, J ANDERSON, I ANDRADE, M A
## 1 1 2
## BABENKO, V N BACKOFEN, R BAILEY, T L
## 1 1 1
## BAKER, P G BALDI, P BARILLOT, E
## 1 2 1
## BELLGARD, M I BENTZ, J BERIKOV, V B
## 1 1 1
## BLAKE, R D BOHNE, A BOUTHINON, D
## 1 1 1
## BOYLE, J BROWN, N P BRUN-SAMARCQ, L
## 1 2 1
## BRUSIC, V BUCKA-LASSEN, K BURGLIN, TR
## 1 1 1
## BUSHNELL, S CARIASO, M CHAO, K M
## 1 1 1
## CHARLESTON, M A CHAU, F T CHEN, C C
## 1 1 1
## CHEUNG, K H CHOU, A CHUZHANOVA, N A
## 1 1 1
## COMERON, J M CONERY, J CONSALEZ, G G
## 1 1 1
## CORPET, F COUPAYE, T COWARD, E
## 1 1 2
## CRAWFORD, O H CUFF, J A DANDEKAR, T
## 1 1 1
## DI FRANCESCO, V DLAKIC, M DRABL酶S, F
## 1 1 1
## ECKMAN, B A EDDY, S R EISENHABER, F
## 1 1 1
## ELLIS, L B EVERS, D FENY枚, D
## 2 1 1
## FERLANTI, E S FISCHER, D FISCHER, S
## 1 1 1
## FLEISCHMANN, W FORSTER, M FRISHMAN, D
## 1 1 1
## GERSTEIN, M GILBERT, D GIUDICELLI, V
## 1 1 1
## GON莽ALVES, I GOODMAN, N GORODKIN, J
## 1 1 1
## GORYANIN, I GOTO, S GOUET, P
## 1 1 1
## GOUJON, C P GRACY, J GRIGORIEV, A
## 1 2 1
## GUERMEUR, Y GUSEV, V D HAMPE, J
## 1 1 1
## HAN, K HANKE, J HARLEY, E
## 1 1 1
## HEIDTKE, K R HENIKOFF, S HERMJAKOB, H
## 1 1 1
## HERN谩NDEZ, A HERTZ, G Z HERZEL, H
## 1 1 1
## HIROKAWA, T HU, J HUBER, T
## 1 1 1
## HUSON, D H IAZZETTI, G JU, L W
## 1 2 1
## JUNGFER, K JUNKER, V L KALLBERG, Y
## 1 1 1
## KARCHIN, R KASPRZAK, W KEL, A
## 1 1 1
## KLEFFE, J KNUDSEN, B KNUDSEN, S
## 1 1 1
## KOCHETOV, A V KOLCHANOV, N A KOLPAKOV, F A
## 1 1 2
## KRAEMER, E T KRAUSE, A KURTZ, S
## 1 1 1
## KYRPIDES, N C LABESSE, G LADUNGA, I
## 1 1 1
## LANZAVECCHIA, S LASCARIS, R F LAVORGNA, G
## 1 1 1
## LENHOF, H P LESER, U LEVIN, S
## 1 1 1
## LEVITSKY, V G LEVY, S LIN, W J
## 1 1 1
## LINDENBAUM, P LIU, J S LI貌, P
## 1 1 1
## LUKASHIN, A V LYNGS酶, R B MACAULEY, J
## 1 1 1
## MALLIAVIN, T E MALLIOS, R R MALTCHENKO, S Z
## 1 1 1
## MANGAN, M E MCGUIRE, G MCINERNEY, J O
## 1 1 1
## MENDES, P MENDOZA, L MILANESI, L
## 1 1 1
## MIZUGUCHI, K MORGENSTERN, B MOTT, R
## 1 1 2
## MUCCHIELLI-GIORGI, M H MURAKAMI, K MURVAI, J
## 1 1 1
## M茅DIGUE, C NADKARNI, P NAKATA, K
## 1 1 1
## NEWELL, W O'DONOVAN, C OHLER, U
## 1 1 1
## OKAYAMA, T OLIVER, J L PARBHANE, R V
## 1 1 1
## PARK, J PASQUIER, CM PAZOS, F
## 1 1 1
## PEGG, S C PESHKIN, L PFEIFFER, T
## 1 1 1
## PICKERT, L POCOCK, M R PODLICH, D W
## 1 1 1
## PONOMARENKO, M P PONOMAREV, A L POOK, S
## 2 1 1
## POSADA, D PROUTSKI, V RAMPONE, S
## 1 1 1
## RAREY, M REBHAN, M REDDY, B V
## 1 1 1
## REDDY, V S RIGOUTSOS, I RIIKONEN, P
## 1 1 1
## RIMER, M RODRIGUEZ-TOM茅, P ROGNES, T
## 1 1 1
## ROZAS, J SALAMOV, A A SANKOFF, D
## 1 1 1
## SAQI, M A SCH盲FFER, A A SCORDIS, P
## 1 1 1
## SELBIG, J SELUJA, G A SENGER, M
## 1 1 1
## SEROV, V N SHATS, O SNEATH, P H
## 1 1 1
## SOBOLEV, V SODERLUND, C SOUTHERN, M R
## 1 1 1
## SPANG, R SRINIVASARAO, G Y STOYE, J
## 1 1 1
## SZE, S H S谩NCHEZ, R TABASKA, J E
## 1 1 1
## TAMAMES, J TARNAS, C TATUSOVA, T A
## 1 1 1
## TAYLOR, S THIEFFRY, D THOMAS, G H
## 1 1 1
## THOMPSON, J D TH茅BAULT, P TOMITA, M
## 1 1 1
## TRELLES, O TSUNODA, T ULIEL, S
## 1 1 1
## VARR茅, J S WAGNER, A WANG, H C
## 1 1 1
## WEI, T WEISSIG, H WJST, M
## 1 1 1
## WORLEY, K C WRIGHT, W WU, C H
## 1 1 1
## WUJU, L YADA, T YAN, M
## 1 2 1
## YUAN, J YUAN, Y P ZHANG, C T
## 1 1 1
## ZHANG, Z ZHU, J ZIMMER, R
## 1 2 1#View(table(fa))