Healthy_Control Vs Healthy_Cytokine
aungmyatphyo
2023-05-11
Required Package
library(dplyr)
library(biomaRt)
library(tximport)
library(rhdf5)
library(gplots)
library(org.Hs.eg.db)
library(DESeq2)
library(DT)
library(apeglm)
library(RColorBrewer)
library(IHW)
library(PCAtools)
library(pheatmap)
library(clusterProfiler)
library(EnhancedVolcano)
library(ComplexHeatmap)
library(circlize)
library(ReactomePA)
library(fgsea)
library(tidyverse)
library(ggpubr)
library(vsn)
library(hexbin)
library(ggnewscale)
library(pathview)setwd("~/Downloads")Directory
# path where your extracted the tar.gz folder to.
# strip the trailing '/'
quant_dir <- "/Users/aungphyo/Downloads/Kallisto"
list.files(quant_dir)## [1] "D_CON1" "D_CON2"
## [3] "D_CON3" "D_TREAT1"
## [5] "D_TREAT2" "D_TREAT3"
## [7] "GRCh38.idx" "H_CON1"
## [9] "H_CON2" "H_CON3"
## [11] "H_CYTKN1" "H_CYTKN2"
## [13] "H_CYTKN3" "H_TREAT1"
## [15] "H_TREAT2" "H_TREAT3"
## [17] "Homo_sapiens.GRCh38.cdna.all.fa.gz" "samples.csv"
## [19] "samples.txt"Metadata
samples <- read.csv(paste0(quant_dir, "/samples.csv"), header=T, row.names = "row", stringsAsFactors = T)
samples## X condition replicate
## D_CON1 NA disease_control 1
## D_CON2 NA disease_control 2
## D_CON3 NA disease_control 3
## D_TREAT1 NA disease_treatment 1
## D_TREAT2 NA disease_treatment 2
## D_TREAT3 NA disease_treatment 3
## H_CON1 NA healthy_control 1
## H_CON2 NA healthy_control 2
## H_CON3 NA healthy_control 3
## H_CYTKN1 NA healthy_cytokine 1
## H_CYTKN2 NA healthy_cytokine 2
## H_CYTKN3 NA healthy_cytokine 3
## H_TREAT1 NA healthy_treatment 1
## H_TREAT2 NA healthy_treatment 2
## H_TREAT3 NA healthy_treatment 3Convert numeric to factor
samples$replicate <- factor(samples$replicate)
# check its ok:
sapply(samples, is.factor)## X condition replicate
## FALSE TRUE TRUEStage Kallisto Files
files <- file.path(quant_dir, rownames(samples), "abundance.h5")
names(files) <- paste0(rownames(samples))
files## D_CON1
## "/Users/aungphyo/Downloads/Kallisto/D_CON1/abundance.h5"
## D_CON2
## "/Users/aungphyo/Downloads/Kallisto/D_CON2/abundance.h5"
## D_CON3
## "/Users/aungphyo/Downloads/Kallisto/D_CON3/abundance.h5"
## D_TREAT1
## "/Users/aungphyo/Downloads/Kallisto/D_TREAT1/abundance.h5"
## D_TREAT2
## "/Users/aungphyo/Downloads/Kallisto/D_TREAT2/abundance.h5"
## D_TREAT3
## "/Users/aungphyo/Downloads/Kallisto/D_TREAT3/abundance.h5"
## H_CON1
## "/Users/aungphyo/Downloads/Kallisto/H_CON1/abundance.h5"
## H_CON2
## "/Users/aungphyo/Downloads/Kallisto/H_CON2/abundance.h5"
## H_CON3
## "/Users/aungphyo/Downloads/Kallisto/H_CON3/abundance.h5"
## H_CYTKN1
## "/Users/aungphyo/Downloads/Kallisto/H_CYTKN1/abundance.h5"
## H_CYTKN2
## "/Users/aungphyo/Downloads/Kallisto/H_CYTKN2/abundance.h5"
## H_CYTKN3
## "/Users/aungphyo/Downloads/Kallisto/H_CYTKN3/abundance.h5"
## H_TREAT1
## "/Users/aungphyo/Downloads/Kallisto/H_TREAT1/abundance.h5"
## H_TREAT2
## "/Users/aungphyo/Downloads/Kallisto/H_TREAT2/abundance.h5"
## H_TREAT3
## "/Users/aungphyo/Downloads/Kallisto/H_TREAT3/abundance.h5"BiomaRT Ensembl
mart <- useMart(biomart = "ensembl", dataset = "hsapiens_gene_ensembl")Transcript to gene
## show how to identify attribute type
# $ head /data/github/quant/ctrl_1/abundance.tsv
## show how to query mart
listAttributes(mart)## name
## 1 ensembl_gene_id
## 2 ensembl_gene_id_version
## 3 ensembl_transcript_id
## 4 ensembl_transcript_id_version
## 5 ensembl_peptide_id
## 6 ensembl_peptide_id_version
## 7 ensembl_exon_id
## 8 description
## 9 chromosome_name
## 10 start_position
## 11 end_position
## 12 strand
## 13 band
## 14 transcript_start
## 15 transcript_end
## 16 transcription_start_site
## 17 transcript_length
## 18 transcript_tsl
## 19 transcript_gencode_basic
## 20 transcript_appris
## 21 transcript_is_canonical
## 22 transcript_mane_select
## 23 transcript_mane_plus_clinical
## 24 external_gene_name
## 25 external_gene_source
## 26 external_transcript_name
## 27 external_transcript_source_name
## 28 transcript_count
## 29 percentage_gene_gc_content
## 30 gene_biotype
## 31 transcript_biotype
## 32 source
## 33 transcript_source
## 34 version
## 35 transcript_version
## 36 peptide_version
## 37 external_synonym
## 38 phenotype_description
## 39 source_name
## 40 study_external_id
## 41 strain_name
## 42 strain_gender
## 43 p_value
## 44 go_id
## 45 name_1006
## 46 definition_1006
## 47 go_linkage_type
## 48 namespace_1003
## 49 goslim_goa_accession
## 50 goslim_goa_description
## 51 biogrid
## 52 ccds
## 53 chembl
## 54 dbass3_name
## 55 dbass3_id
## 56 dbass5_name
## 57 dbass5_id
## 58 entrezgene_trans_name
## 59 embl
## 60 arrayexpress
## 61 genecards
## 62 hgnc_id
## 63 hgnc_symbol
## 64 hpa_accession
## 65 hpa_id
## 66 protein_id
## 67 ens_lrg_gene
## 68 ens_lrg_transcript
## 69 merops
## 70 mim_gene_description
## 71 mim_gene_accession
## 72 mim_morbid_description
## 73 mim_morbid_accession
## 74 mirbase_accession
## 75 mirbase_id
## 76 mirbase_trans_name
## 77 entrezgene_description
## 78 entrezgene_accession
## 79 entrezgene_id
## 80 pdb
## 81 reactome
## 82 reactome_gene
## 83 reactome_transcript
## 84 refseq_mrna
## 85 refseq_mrna_predicted
## 86 refseq_ncrna
## 87 refseq_ncrna_predicted
## 88 refseq_peptide
## 89 refseq_peptide_predicted
## 90 rfam
## 91 rfam_trans_name
## 92 rnacentral
## 93 hgnc_trans_name
## 94 ucsc
## 95 uniparc
## 96 uniprot_gn_symbol
## 97 uniprot_gn_id
## 98 uniprot_isoform
## 99 uniprotswissprot
## 100 uniprotsptrembl
## 101 wikigene_description
## 102 wikigene_name
## 103 wikigene_id
## 104 affy_hc_g110
## 105 affy_hg_focus
## 106 affy_hg_u133a_2
## 107 affy_hg_u133b
## 108 affy_hg_u133_plus_2
## 109 affy_hg_u95a
## 110 affy_hg_u95av2
## 111 affy_hg_u95b
## 112 affy_hg_u95c
## 113 affy_hg_u95d
## 114 affy_hg_u95e
## 115 affy_hta_2_0
## 116 affy_ht_hg_u133_plus_pm
## 117 affy_huex_1_0_st_v2
## 118 affy_hugenefl
## 119 affy_hugene_1_0_st_v1
## 120 affy_hugene_2_0_st_v1
## 121 affy_hugene_2_1_st_v1
## 122 affy_primeview
## 123 affy_u133_x3p
## 124 agilent_cgh_44b
## 125 agilent_gpl19072
## 126 agilent_gpl26966
## 127 agilent_gpl6848
## 128 agilent_sureprint_g3_ge_8x60k
## 129 agilent_sureprint_g3_ge_8x60k_v2
## 130 agilent_wholegenome
## 131 agilent_wholegenome_4x44k_v1
## 132 agilent_wholegenome_4x44k_v2
## 133 codelink_codelink
## 134 illumina_humanref_8_v3
## 135 illumina_humanwg_6_v3
## 136 phalanx_onearray
## 137 cdd
## 138 cdd_start
## 139 cdd_end
## 140 gene3d
## 141 gene3d_start
## 142 gene3d_end
## 143 hamap
## 144 hamap_start
## 145 hamap_end
## 146 hmmpanther
## 147 hmmpanther_start
## 148 hmmpanther_end
## 149 pfam
## 150 pfam_start
## 151 pfam_end
## 152 pirsf
## 153 pirsf_start
## 154 pirsf_end
## 155 prints
## 156 prints_start
## 157 prints_end
## 158 scanprosite
## 159 scanprosite_start
## 160 scanprosite_end
## 161 pfscan
## 162 pfscan_start
## 163 pfscan_end
## 164 sfld
## 165 sfld_start
## 166 sfld_end
## 167 smart
## 168 smart_start
## 169 smart_end
## 170 superfamily
## 171 superfamily_start
## 172 superfamily_end
## 173 tigrfam
## 174 tigrfam_start
## 175 tigrfam_end
## 176 interpro
## 177 interpro_short_description
## 178 interpro_description
## 179 interpro_start
## 180 interpro_end
## 181 alphafold_import
## 182 alphafold_import_start
## 183 alphafold_import_end
## 184 mobidblite
## 185 mobidblite_start
## 186 mobidblite_end
## 187 ncoils
## 188 ncoils_start
## 189 ncoils_end
## 190 seg
## 191 seg_start
## 192 seg_end
## 193 sifts_import
## 194 sifts_import_start
## 195 sifts_import_end
## 196 signalp
## 197 signalp_start
## 198 signalp_end
## 199 tmhmm
## 200 tmhmm_start
## 201 tmhmm_end
## 202 ensembl_gene_id
## 203 ensembl_gene_id_version
## 204 version
## 205 ensembl_transcript_id
## 206 ensembl_transcript_id_version
## 207 transcript_version
## 208 ensembl_peptide_id
## 209 ensembl_peptide_id_version
## 210 peptide_version
## 211 chromosome_name
## 212 start_position
## 213 end_position
## 214 transcript_start
## 215 transcript_end
## 216 transcription_start_site
## 217 transcript_length
## 218 strand
## 219 external_gene_name
## 220 external_gene_source
## 221 5_utr_start
## 222 5_utr_end
## 223 3_utr_start
## 224 3_utr_end
## 225 cds_length
## 226 transcript_count
## 227 description
## 228 gene_biotype
## 229 exon_chrom_start
## 230 exon_chrom_end
## 231 is_constitutive
## 232 rank
## 233 phase
## 234 end_phase
## 235 cdna_coding_start
## 236 cdna_coding_end
## 237 genomic_coding_start
## 238 genomic_coding_end
## 239 ensembl_exon_id
## 240 cds_start
## 241 cds_end
## 242 ensembl_gene_id
## 243 ensembl_gene_id_version
## 244 version
## 245 ensembl_transcript_id
## 246 ensembl_transcript_id_version
## 247 transcript_version
## 248 ensembl_peptide_id
## 249 ensembl_peptide_id_version
## 250 peptide_version
## 251 chromosome_name
## 252 start_position
## 253 end_position
## 254 strand
## 255 band
## 256 external_gene_name
## 257 external_gene_source
## 258 transcript_count
## 259 percentage_gene_gc_content
## 260 description
## 261 cabingdonii_homolog_ensembl_gene
## 262 cabingdonii_homolog_associated_gene_name
## 263 cabingdonii_homolog_ensembl_peptide
## 264 cabingdonii_homolog_chromosome
## 265 cabingdonii_homolog_chrom_start
## 266 cabingdonii_homolog_chrom_end
## 267 cabingdonii_homolog_canonical_transcript_protein
## 268 cabingdonii_homolog_subtype
## 269 cabingdonii_homolog_orthology_type
## 270 cabingdonii_homolog_perc_id
## 271 cabingdonii_homolog_perc_id_r1
## 272 cabingdonii_homolog_goc_score
## 273 cabingdonii_homolog_wga_coverage
## 274 cabingdonii_homolog_orthology_confidence
## 275 scaustralis_homolog_ensembl_gene
## 276 scaustralis_homolog_associated_gene_name
## 277 scaustralis_homolog_ensembl_peptide
## 278 scaustralis_homolog_chromosome
## 279 scaustralis_homolog_chrom_start
## 280 scaustralis_homolog_chrom_end
## 281 scaustralis_homolog_canonical_transcript_protein
## 282 scaustralis_homolog_subtype
## 283 scaustralis_homolog_orthology_type
## 284 scaustralis_homolog_perc_id
## 285 scaustralis_homolog_perc_id_r1
## 286 scaustralis_homolog_goc_score
## 287 scaustralis_homolog_wga_coverage
## 288 scaustralis_homolog_orthology_confidence
## 289 mspretus_homolog_ensembl_gene
## 290 mspretus_homolog_associated_gene_name
## 291 mspretus_homolog_ensembl_peptide
## 292 mspretus_homolog_chromosome
## 293 mspretus_homolog_chrom_start
## 294 mspretus_homolog_chrom_end
## 295 mspretus_homolog_canonical_transcript_protein
## 296 mspretus_homolog_subtype
## 297 mspretus_homolog_orthology_type
## 298 mspretus_homolog_perc_id
## 299 mspretus_homolog_perc_id_r1
## 300 mspretus_homolog_goc_score
## 301 mspretus_homolog_wga_coverage
## 302 mspretus_homolog_orthology_confidence
## 303 vpacos_homolog_ensembl_gene
## 304 vpacos_homolog_associated_gene_name
## 305 vpacos_homolog_ensembl_peptide
## 306 vpacos_homolog_chromosome
## 307 vpacos_homolog_chrom_start
## 308 vpacos_homolog_chrom_end
## 309 vpacos_homolog_canonical_transcript_protein
## 310 vpacos_homolog_subtype
## 311 vpacos_homolog_orthology_type
## 312 vpacos_homolog_perc_id
## 313 vpacos_homolog_perc_id_r1
## 314 vpacos_homolog_goc_score
## 315 vpacos_homolog_wga_coverage
## 316 vpacos_homolog_orthology_confidence
## 317 mmmarmota_homolog_ensembl_gene
## 318 mmmarmota_homolog_associated_gene_name
## 319 mmmarmota_homolog_ensembl_peptide
## 320 mmmarmota_homolog_chromosome
## 321 mmmarmota_homolog_chrom_start
## 322 mmmarmota_homolog_chrom_end
## 323 mmmarmota_homolog_canonical_transcript_protein
## 324 mmmarmota_homolog_subtype
## 325 mmmarmota_homolog_orthology_type
## 326 mmmarmota_homolog_perc_id
## 327 mmmarmota_homolog_perc_id_r1
## 328 mmmarmota_homolog_goc_score
## 329 mmmarmota_homolog_wga_coverage
## 330 mmmarmota_homolog_orthology_confidence
## 331 pformosa_homolog_ensembl_gene
## 332 pformosa_homolog_associated_gene_name
## 333 pformosa_homolog_ensembl_peptide
## 334 pformosa_homolog_chromosome
## 335 pformosa_homolog_chrom_start
## 336 pformosa_homolog_chrom_end
## 337 pformosa_homolog_canonical_transcript_protein
## 338 pformosa_homolog_subtype
## 339 pformosa_homolog_orthology_type
## 340 pformosa_homolog_perc_id
## 341 pformosa_homolog_perc_id_r1
## 342 pformosa_homolog_goc_score
## 343 pformosa_homolog_wga_coverage
## 344 pformosa_homolog_orthology_confidence
## 345 bbbison_homolog_ensembl_gene
## 346 bbbison_homolog_associated_gene_name
## 347 bbbison_homolog_ensembl_peptide
## 348 bbbison_homolog_chromosome
## 349 bbbison_homolog_chrom_start
## 350 bbbison_homolog_chrom_end
## 351 bbbison_homolog_canonical_transcript_protein
## 352 bbbison_homolog_subtype
## 353 bbbison_homolog_orthology_type
## 354 bbbison_homolog_perc_id
## 355 bbbison_homolog_perc_id_r1
## 356 bbbison_homolog_goc_score
## 357 bbbison_homolog_wga_coverage
## 358 bbbison_homolog_orthology_confidence
## 359 uamericanus_homolog_ensembl_gene
## 360 uamericanus_homolog_associated_gene_name
## 361 uamericanus_homolog_ensembl_peptide
## 362 uamericanus_homolog_chromosome
## 363 uamericanus_homolog_chrom_start
## 364 uamericanus_homolog_chrom_end
## 365 uamericanus_homolog_canonical_transcript_protein
## 366 uamericanus_homolog_subtype
## 367 uamericanus_homolog_orthology_type
## 368 uamericanus_homolog_perc_id
## 369 uamericanus_homolog_perc_id_r1
## 370 uamericanus_homolog_goc_score
## 371 uamericanus_homolog_wga_coverage
## 372 uamericanus_homolog_orthology_confidence
## 373 nvison_homolog_ensembl_gene
## 374 nvison_homolog_associated_gene_name
## 375 nvison_homolog_ensembl_peptide
## 376 nvison_homolog_chromosome
## 377 nvison_homolog_chrom_start
## 378 nvison_homolog_chrom_end
## 379 nvison_homolog_canonical_transcript_protein
## 380 nvison_homolog_subtype
## 381 nvison_homolog_orthology_type
## 382 nvison_homolog_perc_id
## 383 nvison_homolog_perc_id_r1
## 384 nvison_homolog_goc_score
## 385 nvison_homolog_wga_coverage
## 386 nvison_homolog_orthology_confidence
## 387 cdromedarius_homolog_ensembl_gene
## 388 cdromedarius_homolog_associated_gene_name
## 389 cdromedarius_homolog_ensembl_peptide
## 390 cdromedarius_homolog_chromosome
## 391 cdromedarius_homolog_chrom_start
## 392 cdromedarius_homolog_chrom_end
## 393 cdromedarius_homolog_canonical_transcript_protein
## 394 cdromedarius_homolog_subtype
## 395 cdromedarius_homolog_orthology_type
## 396 cdromedarius_homolog_perc_id
## 397 cdromedarius_homolog_perc_id_r1
## 398 cdromedarius_homolog_goc_score
## 399 cdromedarius_homolog_wga_coverage
## 400 cdromedarius_homolog_orthology_confidence
## 401 uparryii_homolog_ensembl_gene
## 402 uparryii_homolog_associated_gene_name
## 403 uparryii_homolog_ensembl_peptide
## 404 uparryii_homolog_chromosome
## 405 uparryii_homolog_chrom_start
## 406 uparryii_homolog_chrom_end
## 407 uparryii_homolog_canonical_transcript_protein
## 408 uparryii_homolog_subtype
## 409 uparryii_homolog_orthology_type
## 410 uparryii_homolog_perc_id
## 411 uparryii_homolog_perc_id_r1
## 412 uparryii_homolog_goc_score
## 413 uparryii_homolog_wga_coverage
## 414 uparryii_homolog_orthology_confidence
## 415 smerianae_homolog_ensembl_gene
## 416 smerianae_homolog_associated_gene_name
## 417 smerianae_homolog_ensembl_peptide
## 418 smerianae_homolog_chromosome
## 419 smerianae_homolog_chrom_start
## 420 smerianae_homolog_chrom_end
## 421 smerianae_homolog_canonical_transcript_protein
## 422 smerianae_homolog_subtype
## 423 smerianae_homolog_orthology_type
## 424 smerianae_homolog_perc_id
## 425 smerianae_homolog_perc_id_r1
## 426 smerianae_homolog_goc_score
## 427 smerianae_homolog_wga_coverage
## 428 smerianae_homolog_orthology_confidence
## 429 dnovemcinctus_homolog_ensembl_gene
## 430 dnovemcinctus_homolog_associated_gene_name
## 431 dnovemcinctus_homolog_ensembl_peptide
## 432 dnovemcinctus_homolog_chromosome
## 433 dnovemcinctus_homolog_chrom_start
## 434 dnovemcinctus_homolog_chrom_end
## 435 dnovemcinctus_homolog_canonical_transcript_protein
## 436 dnovemcinctus_homolog_subtype
## 437 dnovemcinctus_homolog_orthology_type
## 438 dnovemcinctus_homolog_perc_id
## 439 dnovemcinctus_homolog_perc_id_r1
## 440 dnovemcinctus_homolog_goc_score
## 441 dnovemcinctus_homolog_wga_coverage
## 442 dnovemcinctus_homolog_orthology_confidence
## 443 sformosus_homolog_ensembl_gene
## 444 sformosus_homolog_associated_gene_name
## 445 sformosus_homolog_ensembl_peptide
## 446 sformosus_homolog_chromosome
## 447 sformosus_homolog_chrom_start
## 448 sformosus_homolog_chrom_end
## 449 sformosus_homolog_canonical_transcript_protein
## 450 sformosus_homolog_subtype
## 451 sformosus_homolog_orthology_type
## 452 sformosus_homolog_perc_id
## 453 sformosus_homolog_perc_id_r1
## 454 sformosus_homolog_goc_score
## 455 sformosus_homolog_wga_coverage
## 456 sformosus_homolog_orthology_confidence
## 457 gmorhua_homolog_ensembl_gene
## 458 gmorhua_homolog_associated_gene_name
## 459 gmorhua_homolog_ensembl_peptide
## 460 gmorhua_homolog_chromosome
## 461 gmorhua_homolog_chrom_start
## 462 gmorhua_homolog_chrom_end
## 463 gmorhua_homolog_canonical_transcript_protein
## 464 gmorhua_homolog_subtype
## 465 gmorhua_homolog_orthology_type
## 466 gmorhua_homolog_perc_id
## 467 gmorhua_homolog_perc_id_r1
## 468 gmorhua_homolog_goc_score
## 469 gmorhua_homolog_orthology_confidence
## 470 charengus_homolog_ensembl_gene
## 471 charengus_homolog_associated_gene_name
## 472 charengus_homolog_ensembl_peptide
## 473 charengus_homolog_chromosome
## 474 charengus_homolog_chrom_start
## 475 charengus_homolog_chrom_end
## 476 charengus_homolog_canonical_transcript_protein
## 477 charengus_homolog_subtype
## 478 charengus_homolog_orthology_type
## 479 charengus_homolog_perc_id
## 480 charengus_homolog_perc_id_r1
## 481 charengus_homolog_goc_score
## 482 charengus_homolog_wga_coverage
## 483 charengus_homolog_orthology_confidence
## 484 ssalar_homolog_ensembl_gene
## 485 ssalar_homolog_associated_gene_name
## 486 ssalar_homolog_ensembl_peptide
## 487 ssalar_homolog_chromosome
## 488 ssalar_homolog_chrom_start
## 489 ssalar_homolog_chrom_end
## 490 ssalar_homolog_canonical_transcript_protein
## 491 ssalar_homolog_subtype
## 492 ssalar_homolog_orthology_type
## 493 ssalar_homolog_perc_id
## 494 ssalar_homolog_perc_id_r1
## 495 ssalar_homolog_goc_score
## 496 ssalar_homolog_orthology_confidence
## 497 cporosus_homolog_ensembl_gene
## 498 cporosus_homolog_associated_gene_name
## 499 cporosus_homolog_ensembl_peptide
## 500 cporosus_homolog_chromosome
## 501 cporosus_homolog_chrom_start
## 502 cporosus_homolog_chrom_end
## 503 cporosus_homolog_canonical_transcript_protein
## 504 cporosus_homolog_subtype
## 505 cporosus_homolog_orthology_type
## 506 cporosus_homolog_perc_id
## 507 cporosus_homolog_perc_id_r1
## 508 cporosus_homolog_goc_score
## 509 cporosus_homolog_wga_coverage
## 510 cporosus_homolog_orthology_confidence
## 511 lbergylta_homolog_ensembl_gene
## 512 lbergylta_homolog_associated_gene_name
## 513 lbergylta_homolog_ensembl_peptide
## 514 lbergylta_homolog_chromosome
## 515 lbergylta_homolog_chrom_start
## 516 lbergylta_homolog_chrom_end
## 517 lbergylta_homolog_canonical_transcript_protein
## 518 lbergylta_homolog_subtype
## 519 lbergylta_homolog_orthology_type
## 520 lbergylta_homolog_perc_id
## 521 lbergylta_homolog_perc_id_r1
## 522 lbergylta_homolog_goc_score
## 523 lbergylta_homolog_wga_coverage
## 524 lbergylta_homolog_orthology_confidence
## 525 lcalcarifer_homolog_ensembl_gene
## 526 lcalcarifer_homolog_associated_gene_name
## 527 lcalcarifer_homolog_ensembl_peptide
## 528 lcalcarifer_homolog_chromosome
## 529 lcalcarifer_homolog_chrom_start
## 530 lcalcarifer_homolog_chrom_end
## 531 lcalcarifer_homolog_canonical_transcript_protein
## 532 lcalcarifer_homolog_subtype
## 533 lcalcarifer_homolog_orthology_type
## 534 lcalcarifer_homolog_perc_id
## 535 lcalcarifer_homolog_perc_id_r1
## 536 lcalcarifer_homolog_goc_score
## 537 lcalcarifer_homolog_wga_coverage
## 538 lcalcarifer_homolog_orthology_confidence
## 539 dleucas_homolog_ensembl_gene
## 540 dleucas_homolog_associated_gene_name
## 541 dleucas_homolog_ensembl_peptide
## 542 dleucas_homolog_chromosome
## 543 dleucas_homolog_chrom_start
## 544 dleucas_homolog_chrom_end
## 545 dleucas_homolog_canonical_transcript_protein
## 546 dleucas_homolog_subtype
## 547 dleucas_homolog_orthology_type
## 548 dleucas_homolog_perc_id
## 549 dleucas_homolog_perc_id_r1
## 550 dleucas_homolog_goc_score
## 551 dleucas_homolog_wga_coverage
## 552 dleucas_homolog_orthology_confidence
## 553 spartitus_homolog_ensembl_gene
## 554 spartitus_homolog_associated_gene_name
## 555 spartitus_homolog_ensembl_peptide
## 556 spartitus_homolog_chromosome
## 557 spartitus_homolog_chrom_start
## 558 spartitus_homolog_chrom_end
## 559 spartitus_homolog_canonical_transcript_protein
## 560 spartitus_homolog_subtype
## 561 spartitus_homolog_orthology_type
## 562 spartitus_homolog_perc_id
## 563 spartitus_homolog_perc_id_r1
## 564 spartitus_homolog_goc_score
## 565 spartitus_homolog_wga_coverage
## 566 spartitus_homolog_orthology_confidence
## 567 rbieti_homolog_ensembl_gene
## 568 rbieti_homolog_associated_gene_name
## 569 rbieti_homolog_ensembl_peptide
## 570 rbieti_homolog_chromosome
## 571 rbieti_homolog_chrom_start
## 572 rbieti_homolog_chrom_end
## 573 rbieti_homolog_canonical_transcript_protein
## 574 rbieti_homolog_subtype
## 575 rbieti_homolog_orthology_type
## 576 rbieti_homolog_perc_id
## 577 rbieti_homolog_perc_id_r1
## 578 rbieti_homolog_goc_score
## 579 rbieti_homolog_wga_coverage
## 580 rbieti_homolog_orthology_confidence
## 581 bmusculus_homolog_ensembl_gene
## 582 bmusculus_homolog_associated_gene_name
## 583 bmusculus_homolog_ensembl_peptide
## 584 bmusculus_homolog_chromosome
## 585 bmusculus_homolog_chrom_start
## 586 bmusculus_homolog_chrom_end
## 587 bmusculus_homolog_canonical_transcript_protein
## 588 bmusculus_homolog_subtype
## 589 bmusculus_homolog_orthology_type
## 590 bmusculus_homolog_perc_id
## 591 bmusculus_homolog_perc_id_r1
## 592 bmusculus_homolog_goc_score
## 593 bmusculus_homolog_wga_coverage
## 594 bmusculus_homolog_orthology_confidence
## 595 llaticaudata_homolog_ensembl_gene
## 596 llaticaudata_homolog_associated_gene_name
## 597 llaticaudata_homolog_ensembl_peptide
## 598 llaticaudata_homolog_chromosome
## 599 llaticaudata_homolog_chrom_start
## 600 llaticaudata_homolog_chrom_end
## 601 llaticaudata_homolog_canonical_transcript_protein
## 602 llaticaudata_homolog_subtype
## 603 llaticaudata_homolog_orthology_type
## 604 llaticaudata_homolog_perc_id
## 605 llaticaudata_homolog_perc_id_r1
## 606 llaticaudata_homolog_goc_score
## 607 llaticaudata_homolog_wga_coverage
## 608 llaticaudata_homolog_orthology_confidence
## 609 sbboliviensis_homolog_ensembl_gene
## 610 sbboliviensis_homolog_associated_gene_name
## 611 sbboliviensis_homolog_ensembl_peptide
## 612 sbboliviensis_homolog_chromosome
## 613 sbboliviensis_homolog_chrom_start
## 614 sbboliviensis_homolog_chrom_end
## 615 sbboliviensis_homolog_canonical_transcript_protein
## 616 sbboliviensis_homolog_subtype
## 617 sbboliviensis_homolog_orthology_type
## 618 sbboliviensis_homolog_perc_id
## 619 sbboliviensis_homolog_perc_id_r1
## 620 sbboliviensis_homolog_goc_score
## 621 sbboliviensis_homolog_wga_coverage
## 622 sbboliviensis_homolog_orthology_confidence
## 623 ppaniscus_homolog_ensembl_gene
## 624 ppaniscus_homolog_associated_gene_name
## 625 ppaniscus_homolog_ensembl_peptide
## 626 ppaniscus_homolog_chromosome
## 627 ppaniscus_homolog_chrom_start
## 628 ppaniscus_homolog_chrom_end
## 629 ppaniscus_homolog_canonical_transcript_protein
## 630 ppaniscus_homolog_subtype
## 631 ppaniscus_homolog_orthology_type
## 632 ppaniscus_homolog_perc_id
## 633 ppaniscus_homolog_perc_id_r1
## 634 ppaniscus_homolog_goc_score
## 635 ppaniscus_homolog_wga_coverage
## 636 ppaniscus_homolog_orthology_confidence
## 637 strutta_homolog_ensembl_gene
## 638 strutta_homolog_associated_gene_name
## 639 strutta_homolog_ensembl_peptide
## 640 strutta_homolog_chromosome
## 641 strutta_homolog_chrom_start
## 642 strutta_homolog_chrom_end
## 643 strutta_homolog_canonical_transcript_protein
## 644 strutta_homolog_subtype
## 645 strutta_homolog_orthology_type
## 646 strutta_homolog_perc_id
## 647 strutta_homolog_perc_id_r1
## 648 strutta_homolog_goc_score
## 649 strutta_homolog_wga_coverage
## 650 strutta_homolog_orthology_confidence
## 651 hburtoni_homolog_ensembl_gene
## 652 hburtoni_homolog_associated_gene_name
## 653 hburtoni_homolog_ensembl_peptide
## 654 hburtoni_homolog_chromosome
## 655 hburtoni_homolog_chrom_start
## 656 hburtoni_homolog_chrom_end
## 657 hburtoni_homolog_canonical_transcript_protein
## 658 hburtoni_homolog_subtype
## 659 hburtoni_homolog_orthology_type
## 660 hburtoni_homolog_perc_id
## 661 hburtoni_homolog_perc_id_r1
## 662 hburtoni_homolog_goc_score
## 663 hburtoni_homolog_wga_coverage
## 664 hburtoni_homolog_orthology_confidence
## 665 ogarnettii_homolog_ensembl_gene
## 666 ogarnettii_homolog_associated_gene_name
## 667 ogarnettii_homolog_ensembl_peptide
## 668 ogarnettii_homolog_chromosome
## 669 ogarnettii_homolog_chrom_start
## 670 ogarnettii_homolog_chrom_end
## 671 ogarnettii_homolog_canonical_transcript_protein
## 672 ogarnettii_homolog_subtype
## 673 ogarnettii_homolog_orthology_type
## 674 ogarnettii_homolog_perc_id
## 675 ogarnettii_homolog_perc_id_r1
## 676 ogarnettii_homolog_goc_score
## 677 ogarnettii_homolog_wga_coverage
## 678 ogarnettii_homolog_orthology_confidence
## 679 cintestinalis_homolog_ensembl_gene
## 680 cintestinalis_homolog_associated_gene_name
## 681 cintestinalis_homolog_ensembl_peptide
## 682 cintestinalis_homolog_chromosome
## 683 cintestinalis_homolog_chrom_start
## 684 cintestinalis_homolog_chrom_end
## 685 cintestinalis_homolog_canonical_transcript_protein
## 686 cintestinalis_homolog_subtype
## 687 cintestinalis_homolog_orthology_type
## 688 cintestinalis_homolog_perc_id
## 689 cintestinalis_homolog_perc_id_r1
## 690 cintestinalis_homolog_wga_coverage
## 691 cintestinalis_homolog_orthology_confidence
## 692 csavignyi_homolog_ensembl_gene
## 693 csavignyi_homolog_associated_gene_name
## 694 csavignyi_homolog_ensembl_peptide
## 695 csavignyi_homolog_chromosome
## 696 csavignyi_homolog_chrom_start
## 697 csavignyi_homolog_chrom_end
## 698 csavignyi_homolog_canonical_transcript_protein
## 699 csavignyi_homolog_subtype
## 700 csavignyi_homolog_orthology_type
## 701 csavignyi_homolog_perc_id
## 702 csavignyi_homolog_perc_id_r1
## 703 csavignyi_homolog_wga_coverage
## 704 csavignyi_homolog_orthology_confidence
## 705 celegans_homolog_ensembl_gene
## 706 celegans_homolog_associated_gene_name
## 707 celegans_homolog_ensembl_peptide
## 708 celegans_homolog_chromosome
## 709 celegans_homolog_chrom_start
## 710 celegans_homolog_chrom_end
## 711 celegans_homolog_canonical_transcript_protein
## 712 celegans_homolog_subtype
## 713 celegans_homolog_orthology_type
## 714 celegans_homolog_perc_id
## 715 celegans_homolog_perc_id_r1
## 716 celegans_homolog_orthology_confidence
## 717 fcatus_homolog_ensembl_gene
## 718 fcatus_homolog_associated_gene_name
## 719 fcatus_homolog_ensembl_peptide
## 720 fcatus_homolog_chromosome
## 721 fcatus_homolog_chrom_start
## 722 fcatus_homolog_chrom_end
## 723 fcatus_homolog_canonical_transcript_protein
## 724 fcatus_homolog_subtype
## 725 fcatus_homolog_orthology_type
## 726 fcatus_homolog_perc_id
## 727 fcatus_homolog_perc_id_r1
## 728 fcatus_homolog_goc_score
## 729 fcatus_homolog_wga_coverage
## 730 fcatus_homolog_orthology_confidence
## 731 cwagneri_homolog_ensembl_gene
## 732 cwagneri_homolog_associated_gene_name
## 733 cwagneri_homolog_ensembl_peptide
## 734 cwagneri_homolog_chromosome
## 735 cwagneri_homolog_chrom_start
## 736 cwagneri_homolog_chrom_end
## 737 cwagneri_homolog_canonical_transcript_protein
## 738 cwagneri_homolog_subtype
## 739 cwagneri_homolog_orthology_type
## 740 cwagneri_homolog_perc_id
## 741 cwagneri_homolog_perc_id_r1
## 742 cwagneri_homolog_goc_score
## 743 cwagneri_homolog_wga_coverage
## 744 cwagneri_homolog_orthology_confidence
## 745 cgobio_homolog_ensembl_gene
## 746 cgobio_homolog_associated_gene_name
## 747 cgobio_homolog_ensembl_peptide
## 748 cgobio_homolog_chromosome
## 749 cgobio_homolog_chrom_start
## 750 cgobio_homolog_chrom_end
## 751 cgobio_homolog_canonical_transcript_protein
## 752 cgobio_homolog_subtype
## 753 cgobio_homolog_orthology_type
## 754 cgobio_homolog_perc_id
## 755 cgobio_homolog_perc_id_r1
## 756 cgobio_homolog_goc_score
## 757 cgobio_homolog_wga_coverage
## 758 cgobio_homolog_orthology_confidence
## 759 ipunctatus_homolog_ensembl_gene
## 760 ipunctatus_homolog_associated_gene_name
## 761 ipunctatus_homolog_ensembl_peptide
## 762 ipunctatus_homolog_chromosome
## 763 ipunctatus_homolog_chrom_start
## 764 ipunctatus_homolog_chrom_end
## 765 ipunctatus_homolog_canonical_transcript_protein
## 766 ipunctatus_homolog_subtype
## 767 ipunctatus_homolog_orthology_type
## 768 ipunctatus_homolog_perc_id
## 769 ipunctatus_homolog_perc_id_r1
## 770 ipunctatus_homolog_goc_score
## 771 ipunctatus_homolog_wga_coverage
## 772 ipunctatus_homolog_orthology_confidence
## 773 ggallus_homolog_ensembl_gene
## 774 ggallus_homolog_associated_gene_name
## 775 ggallus_homolog_ensembl_peptide
## 776 ggallus_homolog_chromosome
## 777 ggallus_homolog_chrom_start
## 778 ggallus_homolog_chrom_end
## 779 ggallus_homolog_canonical_transcript_protein
## 780 ggallus_homolog_subtype
## 781 ggallus_homolog_orthology_type
## 782 ggallus_homolog_perc_id
## 783 ggallus_homolog_perc_id_r1
## 784 ggallus_homolog_goc_score
## 785 ggallus_homolog_wga_coverage
## 786 ggallus_homolog_orthology_confidence
## 787 ptroglodytes_homolog_ensembl_gene
## 788 ptroglodytes_homolog_associated_gene_name
## 789 ptroglodytes_homolog_ensembl_peptide
## 790 ptroglodytes_homolog_chromosome
## 791 ptroglodytes_homolog_chrom_start
## 792 ptroglodytes_homolog_chrom_end
## 793 ptroglodytes_homolog_canonical_transcript_protein
## 794 ptroglodytes_homolog_subtype
## 795 ptroglodytes_homolog_orthology_type
## 796 ptroglodytes_homolog_perc_id
## 797 ptroglodytes_homolog_perc_id_r1
## 798 ptroglodytes_homolog_goc_score
## 799 ptroglodytes_homolog_wga_coverage
## 800 ptroglodytes_homolog_orthology_confidence
## 801 cgchok1gshd_homolog_ensembl_gene
## 802 cgchok1gshd_homolog_associated_gene_name
## 803 cgchok1gshd_homolog_ensembl_peptide
## 804 cgchok1gshd_homolog_chromosome
## 805 cgchok1gshd_homolog_chrom_start
## 806 cgchok1gshd_homolog_chrom_end
## 807 cgchok1gshd_homolog_canonical_transcript_protein
## 808 cgchok1gshd_homolog_subtype
## 809 cgchok1gshd_homolog_orthology_type
## 810 cgchok1gshd_homolog_perc_id
## 811 cgchok1gshd_homolog_perc_id_r1
## 812 cgchok1gshd_homolog_goc_score
## 813 cgchok1gshd_homolog_wga_coverage
## 814 cgchok1gshd_homolog_orthology_confidence
## 815 osinensis_homolog_ensembl_gene
## 816 osinensis_homolog_associated_gene_name
## 817 osinensis_homolog_ensembl_peptide
## 818 osinensis_homolog_chromosome
## 819 osinensis_homolog_chrom_start
## 820 osinensis_homolog_chrom_end
## 821 osinensis_homolog_canonical_transcript_protein
## 822 osinensis_homolog_subtype
## 823 osinensis_homolog_orthology_type
## 824 osinensis_homolog_perc_id
## 825 osinensis_homolog_perc_id_r1
## 826 osinensis_homolog_goc_score
## 827 osinensis_homolog_wga_coverage
## 828 osinensis_homolog_orthology_confidence
## 829 psinensis_homolog_ensembl_gene
## 830 psinensis_homolog_associated_gene_name
## 831 psinensis_homolog_ensembl_peptide
## 832 psinensis_homolog_chromosome
## 833 psinensis_homolog_chrom_start
## 834 psinensis_homolog_chrom_end
## 835 psinensis_homolog_canonical_transcript_protein
## 836 psinensis_homolog_subtype
## 837 psinensis_homolog_orthology_type
## 838 psinensis_homolog_perc_id
## 839 psinensis_homolog_perc_id_r1
## 840 psinensis_homolog_goc_score
## 841 psinensis_homolog_wga_coverage
## 842 psinensis_homolog_orthology_confidence
## 843 otshawytscha_homolog_ensembl_gene
## 844 otshawytscha_homolog_associated_gene_name
## 845 otshawytscha_homolog_ensembl_peptide
## 846 otshawytscha_homolog_chromosome
## 847 otshawytscha_homolog_chrom_start
## 848 otshawytscha_homolog_chrom_end
## 849 otshawytscha_homolog_canonical_transcript_protein
## 850 otshawytscha_homolog_subtype
## 851 otshawytscha_homolog_orthology_type
## 852 otshawytscha_homolog_perc_id
## 853 otshawytscha_homolog_perc_id_r1
## 854 otshawytscha_homolog_goc_score
## 855 otshawytscha_homolog_wga_coverage
## 856 otshawytscha_homolog_orthology_confidence
## 857 atestudineus_homolog_ensembl_gene
## 858 atestudineus_homolog_associated_gene_name
## 859 atestudineus_homolog_ensembl_peptide
## 860 atestudineus_homolog_chromosome
## 861 atestudineus_homolog_chrom_start
## 862 atestudineus_homolog_chrom_end
## 863 atestudineus_homolog_canonical_transcript_protein
## 864 atestudineus_homolog_subtype
## 865 atestudineus_homolog_orthology_type
## 866 atestudineus_homolog_perc_id
## 867 atestudineus_homolog_perc_id_r1
## 868 atestudineus_homolog_goc_score
## 869 atestudineus_homolog_orthology_confidence
## 870 aocellaris_homolog_ensembl_gene
## 871 aocellaris_homolog_associated_gene_name
## 872 aocellaris_homolog_ensembl_peptide
## 873 aocellaris_homolog_chromosome
## 874 aocellaris_homolog_chrom_start
## 875 aocellaris_homolog_chrom_end
## 876 aocellaris_homolog_canonical_transcript_protein
## 877 aocellaris_homolog_subtype
## 878 aocellaris_homolog_orthology_type
## 879 aocellaris_homolog_perc_id
## 880 aocellaris_homolog_perc_id_r1
## 881 aocellaris_homolog_goc_score
## 882 aocellaris_homolog_wga_coverage
## 883 aocellaris_homolog_orthology_confidence
## 884 lchalumnae_homolog_ensembl_gene
## 885 lchalumnae_homolog_associated_gene_name
## 886 lchalumnae_homolog_ensembl_peptide
## 887 lchalumnae_homolog_chromosome
## 888 lchalumnae_homolog_chrom_start
## 889 lchalumnae_homolog_chrom_end
## 890 lchalumnae_homolog_canonical_transcript_protein
## 891 lchalumnae_homolog_subtype
## 892 lchalumnae_homolog_orthology_type
## 893 lchalumnae_homolog_perc_id
## 894 lchalumnae_homolog_perc_id_r1
## 895 lchalumnae_homolog_goc_score
## 896 lchalumnae_homolog_wga_coverage
## 897 lchalumnae_homolog_orthology_confidence
## 898 okisutch_homolog_ensembl_gene
## 899 okisutch_homolog_associated_gene_name
## 900 okisutch_homolog_ensembl_peptide
## 901 okisutch_homolog_chromosome
## 902 okisutch_homolog_chrom_start
## 903 okisutch_homolog_chrom_end
## 904 okisutch_homolog_canonical_transcript_protein
## 905 okisutch_homolog_subtype
## 906 okisutch_homolog_orthology_type
## 907 okisutch_homolog_perc_id
## 908 okisutch_homolog_perc_id_r1
## 909 okisutch_homolog_goc_score
## 910 okisutch_homolog_wga_coverage
## 911 okisutch_homolog_orthology_confidence
## 912 falbicollis_homolog_ensembl_gene
## 913 falbicollis_homolog_associated_gene_name
## 914 falbicollis_homolog_ensembl_peptide
## 915 falbicollis_homolog_chromosome
## 916 falbicollis_homolog_chrom_start
## 917 falbicollis_homolog_chrom_end
## 918 falbicollis_homolog_canonical_transcript_protein
## 919 falbicollis_homolog_subtype
## 920 falbicollis_homolog_orthology_type
## 921 falbicollis_homolog_perc_id
## 922 falbicollis_homolog_perc_id_r1
## 923 falbicollis_homolog_goc_score
## 924 falbicollis_homolog_orthology_confidence
## 925 scanaria_homolog_ensembl_gene
## 926 scanaria_homolog_associated_gene_name
## 927 scanaria_homolog_ensembl_peptide
## 928 scanaria_homolog_chromosome
## 929 scanaria_homolog_chrom_start
## 930 scanaria_homolog_chrom_end
## 931 scanaria_homolog_canonical_transcript_protein
## 932 scanaria_homolog_subtype
## 933 scanaria_homolog_orthology_type
## 934 scanaria_homolog_perc_id
## 935 scanaria_homolog_perc_id_r1
## 936 scanaria_homolog_goc_score
## 937 scanaria_homolog_wga_coverage
## 938 scanaria_homolog_orthology_confidence
## 939 cccarpio_homolog_ensembl_gene
## 940 cccarpio_homolog_associated_gene_name
## 941 cccarpio_homolog_ensembl_peptide
## 942 cccarpio_homolog_chromosome
## 943 cccarpio_homolog_chrom_start
## 944 cccarpio_homolog_chrom_end
## 945 cccarpio_homolog_canonical_transcript_protein
## 946 cccarpio_homolog_subtype
## 947 cccarpio_homolog_orthology_type
## 948 cccarpio_homolog_perc_id
## 949 cccarpio_homolog_perc_id_r1
## 950 cccarpio_homolog_goc_score
## 951 cccarpio_homolog_orthology_confidence
## 952 pmuralis_homolog_ensembl_gene
## 953 pmuralis_homolog_associated_gene_name
## 954 pmuralis_homolog_ensembl_peptide
## 955 pmuralis_homolog_chromosome
## 956 pmuralis_homolog_chrom_start
## 957 pmuralis_homolog_chrom_end
## 958 pmuralis_homolog_canonical_transcript_protein
## 959 pmuralis_homolog_subtype
## 960 pmuralis_homolog_orthology_type
## 961 pmuralis_homolog_perc_id
## 962 pmuralis_homolog_perc_id_r1
## 963 pmuralis_homolog_goc_score
## 964 pmuralis_homolog_wga_coverage
## 965 pmuralis_homolog_orthology_confidence
## 966 vursinus_homolog_ensembl_gene
## 967 vursinus_homolog_associated_gene_name
## 968 vursinus_homolog_ensembl_peptide
## 969 vursinus_homolog_chromosome
## 970 vursinus_homolog_chrom_start
## 971 vursinus_homolog_chrom_end
## 972 vursinus_homolog_canonical_transcript_protein
## 973 vursinus_homolog_subtype
## 974 vursinus_homolog_orthology_type
## 975 vursinus_homolog_perc_id
## 976 vursinus_homolog_perc_id_r1
## 977 vursinus_homolog_goc_score
## 978 vursinus_homolog_wga_coverage
## 979 vursinus_homolog_orthology_confidence
## 980 pcoquereli_homolog_ensembl_gene
## 981 pcoquereli_homolog_associated_gene_name
## 982 pcoquereli_homolog_ensembl_peptide
## 983 pcoquereli_homolog_chromosome
## 984 pcoquereli_homolog_chrom_start
## 985 pcoquereli_homolog_chrom_end
## 986 pcoquereli_homolog_canonical_transcript_protein
## 987 pcoquereli_homolog_subtype
## 988 pcoquereli_homolog_orthology_type
## 989 pcoquereli_homolog_perc_id
## 990 pcoquereli_homolog_perc_id_r1
## 991 pcoquereli_homolog_goc_score
## 992 pcoquereli_homolog_wga_coverage
## 993 pcoquereli_homolog_orthology_confidence
## 994 btaurus_homolog_ensembl_gene
## 995 btaurus_homolog_associated_gene_name
## 996 btaurus_homolog_ensembl_peptide
## 997 btaurus_homolog_chromosome
## 998 btaurus_homolog_chrom_start
## 999 btaurus_homolog_chrom_end
## 1000 btaurus_homolog_canonical_transcript_protein
## 1001 btaurus_homolog_subtype
## 1002 btaurus_homolog_orthology_type
## 1003 btaurus_homolog_perc_id
## 1004 btaurus_homolog_perc_id_r1
## 1005 btaurus_homolog_goc_score
## 1006 btaurus_homolog_wga_coverage
## 1007 btaurus_homolog_orthology_confidence
## 1008 mfascicularis_homolog_ensembl_gene
## 1009 mfascicularis_homolog_associated_gene_name
## 1010 mfascicularis_homolog_ensembl_peptide
## 1011 mfascicularis_homolog_chromosome
## 1012 mfascicularis_homolog_chrom_start
## 1013 mfascicularis_homolog_chrom_end
## 1014 mfascicularis_homolog_canonical_transcript_protein
## 1015 mfascicularis_homolog_subtype
## 1016 mfascicularis_homolog_orthology_type
## 1017 mfascicularis_homolog_perc_id
## 1018 mfascicularis_homolog_perc_id_r1
## 1019 mfascicularis_homolog_goc_score
## 1020 mfascicularis_homolog_wga_coverage
## 1021 mfascicularis_homolog_orthology_confidence
## 1022 odegus_homolog_ensembl_gene
## 1023 odegus_homolog_associated_gene_name
## 1024 odegus_homolog_ensembl_peptide
## 1025 odegus_homolog_chromosome
## 1026 odegus_homolog_chrom_start
## 1027 odegus_homolog_chrom_end
## 1028 odegus_homolog_canonical_transcript_protein
## 1029 odegus_homolog_subtype
## 1030 odegus_homolog_orthology_type
## 1031 odegus_homolog_perc_id
## 1032 odegus_homolog_perc_id_r1
## 1033 odegus_homolog_goc_score
## 1034 odegus_homolog_wga_coverage
## 1035 odegus_homolog_orthology_confidence
## 1036 dclupeoides_homolog_ensembl_gene
## 1037 dclupeoides_homolog_associated_gene_name
## 1038 dclupeoides_homolog_ensembl_peptide
## 1039 dclupeoides_homolog_chromosome
## 1040 dclupeoides_homolog_chrom_start
## 1041 dclupeoides_homolog_chrom_end
## 1042 dclupeoides_homolog_canonical_transcript_protein
## 1043 dclupeoides_homolog_subtype
## 1044 dclupeoides_homolog_orthology_type
## 1045 dclupeoides_homolog_perc_id
## 1046 dclupeoides_homolog_perc_id_r1
## 1047 dclupeoides_homolog_goc_score
## 1048 dclupeoides_homolog_wga_coverage
## 1049 dclupeoides_homolog_orthology_confidence
## 1050 cldingo_homolog_ensembl_gene
## 1051 cldingo_homolog_associated_gene_name
## 1052 cldingo_homolog_ensembl_peptide
## 1053 cldingo_homolog_chromosome
## 1054 cldingo_homolog_chrom_start
## 1055 cldingo_homolog_chrom_end
## 1056 cldingo_homolog_canonical_transcript_protein
## 1057 cldingo_homolog_subtype
## 1058 cldingo_homolog_orthology_type
## 1059 cldingo_homolog_perc_id
## 1060 cldingo_homolog_perc_id_r1
## 1061 cldingo_homolog_goc_score
## 1062 cldingo_homolog_wga_coverage
## 1063 cldingo_homolog_orthology_confidence
## 1064 clfamiliaris_homolog_ensembl_gene
## 1065 clfamiliaris_homolog_associated_gene_name
## 1066 clfamiliaris_homolog_ensembl_peptide
## 1067 clfamiliaris_homolog_chromosome
## 1068 clfamiliaris_homolog_chrom_start
## 1069 clfamiliaris_homolog_chrom_end
## 1070 clfamiliaris_homolog_canonical_transcript_protein
## 1071 clfamiliaris_homolog_subtype
## 1072 clfamiliaris_homolog_orthology_type
## 1073 clfamiliaris_homolog_perc_id
## 1074 clfamiliaris_homolog_perc_id_r1
## 1075 clfamiliaris_homolog_goc_score
## 1076 clfamiliaris_homolog_wga_coverage
## 1077 clfamiliaris_homolog_orthology_confidence
## 1078 ttruncatus_homolog_ensembl_gene
## 1079 ttruncatus_homolog_associated_gene_name
## 1080 ttruncatus_homolog_ensembl_peptide
## 1081 ttruncatus_homolog_chromosome
## 1082 ttruncatus_homolog_chrom_start
## 1083 ttruncatus_homolog_chrom_end
## 1084 ttruncatus_homolog_canonical_transcript_protein
## 1085 ttruncatus_homolog_subtype
## 1086 ttruncatus_homolog_orthology_type
## 1087 ttruncatus_homolog_perc_id
## 1088 ttruncatus_homolog_perc_id_r1
## 1089 ttruncatus_homolog_goc_score
## 1090 ttruncatus_homolog_wga_coverage
## 1091 ttruncatus_homolog_orthology_confidence
## 1092 bgrunniens_homolog_ensembl_gene
## 1093 bgrunniens_homolog_associated_gene_name
## 1094 bgrunniens_homolog_ensembl_peptide
## 1095 bgrunniens_homolog_chromosome
## 1096 bgrunniens_homolog_chrom_start
## 1097 bgrunniens_homolog_chrom_end
## 1098 bgrunniens_homolog_canonical_transcript_protein
## 1099 bgrunniens_homolog_subtype
## 1100 bgrunniens_homolog_orthology_type
## 1101 bgrunniens_homolog_perc_id
## 1102 bgrunniens_homolog_perc_id_r1
## 1103 bgrunniens_homolog_goc_score
## 1104 bgrunniens_homolog_wga_coverage
## 1105 bgrunniens_homolog_orthology_confidence
## 1106 easinus_homolog_ensembl_gene
## 1107 easinus_homolog_associated_gene_name
## 1108 easinus_homolog_ensembl_peptide
## 1109 easinus_homolog_chromosome
## 1110 easinus_homolog_chrom_start
## 1111 easinus_homolog_chrom_end
## 1112 easinus_homolog_canonical_transcript_protein
## 1113 easinus_homolog_subtype
## 1114 easinus_homolog_orthology_type
## 1115 easinus_homolog_perc_id
## 1116 easinus_homolog_perc_id_r1
## 1117 easinus_homolog_goc_score
## 1118 easinus_homolog_orthology_confidence
## 1119 mleucophaeus_homolog_ensembl_gene
## 1120 mleucophaeus_homolog_associated_gene_name
## 1121 mleucophaeus_homolog_ensembl_peptide
## 1122 mleucophaeus_homolog_chromosome
## 1123 mleucophaeus_homolog_chrom_start
## 1124 mleucophaeus_homolog_chrom_end
## 1125 mleucophaeus_homolog_canonical_transcript_protein
## 1126 mleucophaeus_homolog_subtype
## 1127 mleucophaeus_homolog_orthology_type
## 1128 mleucophaeus_homolog_perc_id
## 1129 mleucophaeus_homolog_perc_id_r1
## 1130 mleucophaeus_homolog_goc_score
## 1131 mleucophaeus_homolog_wga_coverage
## 1132 mleucophaeus_homolog_orthology_confidence
## 1133 dmelanogaster_homolog_ensembl_gene
## 1134 dmelanogaster_homolog_associated_gene_name
## 1135 dmelanogaster_homolog_ensembl_peptide
## 1136 dmelanogaster_homolog_chromosome
## 1137 dmelanogaster_homolog_chrom_start
## 1138 dmelanogaster_homolog_chrom_end
## 1139 dmelanogaster_homolog_canonical_transcript_protein
## 1140 dmelanogaster_homolog_subtype
## 1141 dmelanogaster_homolog_orthology_type
## 1142 dmelanogaster_homolog_perc_id
## 1143 dmelanogaster_homolog_perc_id_r1
## 1144 dmelanogaster_homolog_orthology_confidence
## 1145 applatyrhynchos_homolog_ensembl_gene
## 1146 applatyrhynchos_homolog_associated_gene_name
## 1147 applatyrhynchos_homolog_ensembl_peptide
## 1148 applatyrhynchos_homolog_chromosome
## 1149 applatyrhynchos_homolog_chrom_start
## 1150 applatyrhynchos_homolog_chrom_end
## 1151 applatyrhynchos_homolog_canonical_transcript_protein
## 1152 applatyrhynchos_homolog_subtype
## 1153 applatyrhynchos_homolog_orthology_type
## 1154 applatyrhynchos_homolog_perc_id
## 1155 applatyrhynchos_homolog_perc_id_r1
## 1156 applatyrhynchos_homolog_goc_score
## 1157 applatyrhynchos_homolog_wga_coverage
## 1158 applatyrhynchos_homolog_orthology_confidence
## 1159 ptextilis_homolog_ensembl_gene
## 1160 ptextilis_homolog_associated_gene_name
## 1161 ptextilis_homolog_ensembl_peptide
## 1162 ptextilis_homolog_chromosome
## 1163 ptextilis_homolog_chrom_start
## 1164 ptextilis_homolog_chrom_end
## 1165 ptextilis_homolog_canonical_transcript_protein
## 1166 ptextilis_homolog_subtype
## 1167 ptextilis_homolog_orthology_type
## 1168 ptextilis_homolog_perc_id
## 1169 ptextilis_homolog_perc_id_r1
## 1170 ptextilis_homolog_goc_score
## 1171 ptextilis_homolog_wga_coverage
## 1172 ptextilis_homolog_orthology_confidence
## 1173 acalliptera_homolog_ensembl_gene
## 1174 acalliptera_homolog_associated_gene_name
## 1175 acalliptera_homolog_ensembl_peptide
## 1176 acalliptera_homolog_chromosome
## 1177 acalliptera_homolog_chrom_start
## 1178 acalliptera_homolog_chrom_end
## 1179 acalliptera_homolog_canonical_transcript_protein
## 1180 acalliptera_homolog_subtype
## 1181 acalliptera_homolog_orthology_type
## 1182 acalliptera_homolog_perc_id
## 1183 acalliptera_homolog_perc_id_r1
## 1184 acalliptera_homolog_goc_score
## 1185 acalliptera_homolog_wga_coverage
## 1186 acalliptera_homolog_orthology_confidence
## 1187 eelectricus_homolog_ensembl_gene
## 1188 eelectricus_homolog_associated_gene_name
## 1189 eelectricus_homolog_ensembl_peptide
## 1190 eelectricus_homolog_chromosome
## 1191 eelectricus_homolog_chrom_start
## 1192 eelectricus_homolog_chrom_end
## 1193 eelectricus_homolog_canonical_transcript_protein
## 1194 eelectricus_homolog_subtype
## 1195 eelectricus_homolog_orthology_type
## 1196 eelectricus_homolog_perc_id
## 1197 eelectricus_homolog_perc_id_r1
## 1198 eelectricus_homolog_goc_score
## 1199 eelectricus_homolog_wga_coverage
## 1200 eelectricus_homolog_orthology_confidence
## 1201 lafricana_homolog_ensembl_gene
## 1202 lafricana_homolog_associated_gene_name
## 1203 lafricana_homolog_ensembl_peptide
## 1204 lafricana_homolog_chromosome
## 1205 lafricana_homolog_chrom_start
## 1206 lafricana_homolog_chrom_end
## 1207 lafricana_homolog_canonical_transcript_protein
## 1208 lafricana_homolog_subtype
## 1209 lafricana_homolog_orthology_type
## 1210 lafricana_homolog_perc_id
## 1211 lafricana_homolog_perc_id_r1
## 1212 lafricana_homolog_goc_score
## 1213 lafricana_homolog_wga_coverage
## 1214 lafricana_homolog_orthology_confidence
## 1215 cmilii_homolog_ensembl_gene
## 1216 cmilii_homolog_associated_gene_name
## 1217 cmilii_homolog_ensembl_peptide
## 1218 cmilii_homolog_chromosome
## 1219 cmilii_homolog_chrom_start
## 1220 cmilii_homolog_chrom_end
## 1221 cmilii_homolog_canonical_transcript_protein
## 1222 cmilii_homolog_subtype
## 1223 cmilii_homolog_orthology_type
## 1224 cmilii_homolog_perc_id
## 1225 cmilii_homolog_perc_id_r1
## 1226 cmilii_homolog_wga_coverage
## 1227 cmilii_homolog_orthology_confidence
## 1228 svulgaris_homolog_ensembl_gene
## 1229 svulgaris_homolog_associated_gene_name
## 1230 svulgaris_homolog_ensembl_peptide
## 1231 svulgaris_homolog_chromosome
## 1232 svulgaris_homolog_chrom_start
## 1233 svulgaris_homolog_chrom_end
## 1234 svulgaris_homolog_canonical_transcript_protein
## 1235 svulgaris_homolog_subtype
## 1236 svulgaris_homolog_orthology_type
## 1237 svulgaris_homolog_perc_id
## 1238 svulgaris_homolog_perc_id_r1
## 1239 svulgaris_homolog_goc_score
## 1240 svulgaris_homolog_wga_coverage
## 1241 svulgaris_homolog_orthology_confidence
## 1242 dlabrax_homolog_ensembl_gene
## 1243 dlabrax_homolog_associated_gene_name
## 1244 dlabrax_homolog_ensembl_peptide
## 1245 dlabrax_homolog_chromosome
## 1246 dlabrax_homolog_chrom_start
## 1247 dlabrax_homolog_chrom_end
## 1248 dlabrax_homolog_canonical_transcript_protein
## 1249 dlabrax_homolog_subtype
## 1250 dlabrax_homolog_orthology_type
## 1251 dlabrax_homolog_perc_id
## 1252 dlabrax_homolog_perc_id_r1
## 1253 dlabrax_homolog_goc_score
## 1254 dlabrax_homolog_orthology_confidence
## 1255 mpfuro_homolog_ensembl_gene
## 1256 mpfuro_homolog_associated_gene_name
## 1257 mpfuro_homolog_ensembl_peptide
## 1258 mpfuro_homolog_chromosome
## 1259 mpfuro_homolog_chrom_start
## 1260 mpfuro_homolog_chrom_end
## 1261 mpfuro_homolog_canonical_transcript_protein
## 1262 mpfuro_homolog_subtype
## 1263 mpfuro_homolog_orthology_type
## 1264 mpfuro_homolog_perc_id
## 1265 mpfuro_homolog_perc_id_r1
## 1266 mpfuro_homolog_goc_score
## 1267 mpfuro_homolog_wga_coverage
## 1268 mpfuro_homolog_orthology_confidence
## 1269 trubripes_homolog_ensembl_gene
## 1270 trubripes_homolog_associated_gene_name
## 1271 trubripes_homolog_ensembl_peptide
## 1272 trubripes_homolog_chromosome
## 1273 trubripes_homolog_chrom_start
## 1274 trubripes_homolog_chrom_end
## 1275 trubripes_homolog_canonical_transcript_protein
## 1276 trubripes_homolog_subtype
## 1277 trubripes_homolog_orthology_type
## 1278 trubripes_homolog_perc_id
## 1279 trubripes_homolog_perc_id_r1
## 1280 trubripes_homolog_goc_score
## 1281 trubripes_homolog_wga_coverage
## 1282 trubripes_homolog_orthology_confidence
## 1283 amelanoleuca_homolog_ensembl_gene
## 1284 amelanoleuca_homolog_associated_gene_name
## 1285 amelanoleuca_homolog_ensembl_peptide
## 1286 amelanoleuca_homolog_chromosome
## 1287 amelanoleuca_homolog_chrom_start
## 1288 amelanoleuca_homolog_chrom_end
## 1289 amelanoleuca_homolog_canonical_transcript_protein
## 1290 amelanoleuca_homolog_subtype
## 1291 amelanoleuca_homolog_orthology_type
## 1292 amelanoleuca_homolog_perc_id
## 1293 amelanoleuca_homolog_perc_id_r1
## 1294 amelanoleuca_homolog_goc_score
## 1295 amelanoleuca_homolog_orthology_confidence
## 1296 nleucogenys_homolog_ensembl_gene
## 1297 nleucogenys_homolog_associated_gene_name
## 1298 nleucogenys_homolog_ensembl_peptide
## 1299 nleucogenys_homolog_chromosome
## 1300 nleucogenys_homolog_chrom_start
## 1301 nleucogenys_homolog_chrom_end
## 1302 nleucogenys_homolog_canonical_transcript_protein
## 1303 nleucogenys_homolog_subtype
## 1304 nleucogenys_homolog_orthology_type
## 1305 nleucogenys_homolog_perc_id
## 1306 nleucogenys_homolog_perc_id_r1
## 1307 nleucogenys_homolog_goc_score
## 1308 nleucogenys_homolog_wga_coverage
## 1309 nleucogenys_homolog_orthology_confidence
## 1310 saurata_homolog_ensembl_gene
## 1311 saurata_homolog_associated_gene_name
## 1312 saurata_homolog_ensembl_peptide
## 1313 saurata_homolog_chromosome
## 1314 saurata_homolog_chrom_start
## 1315 saurata_homolog_chrom_end
## 1316 saurata_homolog_canonical_transcript_protein
## 1317 saurata_homolog_subtype
## 1318 saurata_homolog_orthology_type
## 1319 saurata_homolog_perc_id
## 1320 saurata_homolog_perc_id_r1
## 1321 saurata_homolog_goc_score
## 1322 saurata_homolog_wga_coverage
## 1323 saurata_homolog_orthology_confidence
## 1324 chircus_homolog_ensembl_gene
## 1325 chircus_homolog_associated_gene_name
## 1326 chircus_homolog_ensembl_peptide
## 1327 chircus_homolog_chromosome
## 1328 chircus_homolog_chrom_start
## 1329 chircus_homolog_chrom_end
## 1330 chircus_homolog_canonical_transcript_protein
## 1331 chircus_homolog_subtype
## 1332 chircus_homolog_orthology_type
## 1333 chircus_homolog_perc_id
## 1334 chircus_homolog_perc_id_r1
## 1335 chircus_homolog_goc_score
## 1336 chircus_homolog_wga_coverage
## 1337 chircus_homolog_orthology_confidence
## 1338 mauratus_homolog_ensembl_gene
## 1339 mauratus_homolog_associated_gene_name
## 1340 mauratus_homolog_ensembl_peptide
## 1341 mauratus_homolog_chromosome
## 1342 mauratus_homolog_chrom_start
## 1343 mauratus_homolog_chrom_end
## 1344 mauratus_homolog_canonical_transcript_protein
## 1345 mauratus_homolog_subtype
## 1346 mauratus_homolog_orthology_type
## 1347 mauratus_homolog_perc_id
## 1348 mauratus_homolog_perc_id_r1
## 1349 mauratus_homolog_goc_score
## 1350 mauratus_homolog_wga_coverage
## 1351 mauratus_homolog_orthology_confidence
## 1352 acchrysaetos_homolog_ensembl_gene
## 1353 acchrysaetos_homolog_associated_gene_name
## 1354 acchrysaetos_homolog_ensembl_peptide
## 1355 acchrysaetos_homolog_chromosome
## 1356 acchrysaetos_homolog_chrom_start
## 1357 acchrysaetos_homolog_chrom_end
## 1358 acchrysaetos_homolog_canonical_transcript_protein
## 1359 acchrysaetos_homolog_subtype
## 1360 acchrysaetos_homolog_orthology_type
## 1361 acchrysaetos_homolog_perc_id
## 1362 acchrysaetos_homolog_perc_id_r1
## 1363 acchrysaetos_homolog_goc_score
## 1364 acchrysaetos_homolog_wga_coverage
## 1365 acchrysaetos_homolog_orthology_confidence
## 1366 rroxellana_homolog_ensembl_gene
## 1367 rroxellana_homolog_associated_gene_name
## 1368 rroxellana_homolog_ensembl_peptide
## 1369 rroxellana_homolog_chromosome
## 1370 rroxellana_homolog_chrom_start
## 1371 rroxellana_homolog_chrom_end
## 1372 rroxellana_homolog_canonical_transcript_protein
## 1373 rroxellana_homolog_subtype
## 1374 rroxellana_homolog_orthology_type
## 1375 rroxellana_homolog_perc_id
## 1376 rroxellana_homolog_perc_id_r1
## 1377 rroxellana_homolog_goc_score
## 1378 rroxellana_homolog_wga_coverage
## 1379 rroxellana_homolog_orthology_confidence
## 1380 sgrahami_homolog_ensembl_gene
## 1381 sgrahami_homolog_associated_gene_name
## 1382 sgrahami_homolog_ensembl_peptide
## 1383 sgrahami_homolog_chromosome
## 1384 sgrahami_homolog_chrom_start
## 1385 sgrahami_homolog_chrom_end
## 1386 sgrahami_homolog_canonical_transcript_protein
## 1387 sgrahami_homolog_subtype
## 1388 sgrahami_homolog_orthology_type
## 1389 sgrahami_homolog_perc_id
## 1390 sgrahami_homolog_perc_id_r1
## 1391 sgrahami_homolog_goc_score
## 1392 sgrahami_homolog_wga_coverage
## 1393 sgrahami_homolog_orthology_confidence
## 1394 cauratus_homolog_ensembl_gene
## 1395 cauratus_homolog_associated_gene_name
## 1396 cauratus_homolog_ensembl_peptide
## 1397 cauratus_homolog_chromosome
## 1398 cauratus_homolog_chrom_start
## 1399 cauratus_homolog_chrom_end
## 1400 cauratus_homolog_canonical_transcript_protein
## 1401 cauratus_homolog_subtype
## 1402 cauratus_homolog_orthology_type
## 1403 cauratus_homolog_perc_id
## 1404 cauratus_homolog_perc_id_r1
## 1405 cauratus_homolog_goc_score
## 1406 cauratus_homolog_wga_coverage
## 1407 cauratus_homolog_orthology_confidence
## 1408 gevgoodei_homolog_ensembl_gene
## 1409 gevgoodei_homolog_associated_gene_name
## 1410 gevgoodei_homolog_ensembl_peptide
## 1411 gevgoodei_homolog_chromosome
## 1412 gevgoodei_homolog_chrom_start
## 1413 gevgoodei_homolog_chrom_end
## 1414 gevgoodei_homolog_canonical_transcript_protein
## 1415 gevgoodei_homolog_subtype
## 1416 gevgoodei_homolog_orthology_type
## 1417 gevgoodei_homolog_perc_id
## 1418 gevgoodei_homolog_perc_id_r1
## 1419 gevgoodei_homolog_goc_score
## 1420 gevgoodei_homolog_wga_coverage
## 1421 gevgoodei_homolog_orthology_confidence
## 1422 ggorilla_homolog_ensembl_gene
## 1423 ggorilla_homolog_associated_gene_name
## 1424 ggorilla_homolog_ensembl_peptide
## 1425 ggorilla_homolog_chromosome
## 1426 ggorilla_homolog_chrom_start
## 1427 ggorilla_homolog_chrom_end
## 1428 ggorilla_homolog_canonical_transcript_protein
## 1429 ggorilla_homolog_subtype
## 1430 ggorilla_homolog_orthology_type
## 1431 ggorilla_homolog_perc_id
## 1432 ggorilla_homolog_perc_id_r1
## 1433 ggorilla_homolog_goc_score
## 1434 ggorilla_homolog_wga_coverage
## 1435 ggorilla_homolog_orthology_confidence
## 1436 pmajor_homolog_ensembl_gene
## 1437 pmajor_homolog_associated_gene_name
## 1438 pmajor_homolog_ensembl_peptide
## 1439 pmajor_homolog_chromosome
## 1440 pmajor_homolog_chrom_start
## 1441 pmajor_homolog_chrom_end
## 1442 pmajor_homolog_canonical_transcript_protein
## 1443 pmajor_homolog_subtype
## 1444 pmajor_homolog_orthology_type
## 1445 pmajor_homolog_perc_id
## 1446 pmajor_homolog_perc_id_r1
## 1447 pmajor_homolog_goc_score
## 1448 pmajor_homolog_wga_coverage
## 1449 pmajor_homolog_orthology_confidence
## 1450 sdumerili_homolog_ensembl_gene
## 1451 sdumerili_homolog_associated_gene_name
## 1452 sdumerili_homolog_ensembl_peptide
## 1453 sdumerili_homolog_chromosome
## 1454 sdumerili_homolog_chrom_start
## 1455 sdumerili_homolog_chrom_end
## 1456 sdumerili_homolog_canonical_transcript_protein
## 1457 sdumerili_homolog_subtype
## 1458 sdumerili_homolog_orthology_type
## 1459 sdumerili_homolog_perc_id
## 1460 sdumerili_homolog_perc_id_r1
## 1461 sdumerili_homolog_goc_score
## 1462 sdumerili_homolog_wga_coverage
## 1463 sdumerili_homolog_orthology_confidence
## 1464 psimus_homolog_ensembl_gene
## 1465 psimus_homolog_associated_gene_name
## 1466 psimus_homolog_ensembl_peptide
## 1467 psimus_homolog_chromosome
## 1468 psimus_homolog_chrom_start
## 1469 psimus_homolog_chrom_end
## 1470 psimus_homolog_canonical_transcript_protein
## 1471 psimus_homolog_subtype
## 1472 psimus_homolog_orthology_type
## 1473 psimus_homolog_perc_id
## 1474 psimus_homolog_perc_id_r1
## 1475 psimus_homolog_goc_score
## 1476 psimus_homolog_wga_coverage
## 1477 psimus_homolog_orthology_confidence
## 1478 rferrumequinum_homolog_ensembl_gene
## 1479 rferrumequinum_homolog_associated_gene_name
## 1480 rferrumequinum_homolog_ensembl_peptide
## 1481 rferrumequinum_homolog_chromosome
## 1482 rferrumequinum_homolog_chrom_start
## 1483 rferrumequinum_homolog_chrom_end
## 1484 rferrumequinum_homolog_canonical_transcript_protein
## 1485 rferrumequinum_homolog_subtype
## 1486 rferrumequinum_homolog_orthology_type
## 1487 rferrumequinum_homolog_perc_id
## 1488 rferrumequinum_homolog_perc_id_r1
## 1489 rferrumequinum_homolog_goc_score
## 1490 rferrumequinum_homolog_wga_coverage
## 1491 rferrumequinum_homolog_orthology_confidence
## 1492 acarolinensis_homolog_ensembl_gene
## 1493 acarolinensis_homolog_associated_gene_name
## 1494 acarolinensis_homolog_ensembl_peptide
## 1495 acarolinensis_homolog_chromosome
## 1496 acarolinensis_homolog_chrom_start
## 1497 acarolinensis_homolog_chrom_end
## 1498 acarolinensis_homolog_canonical_transcript_protein
## 1499 acarolinensis_homolog_subtype
## 1500 acarolinensis_homolog_orthology_type
## 1501 acarolinensis_homolog_perc_id
## 1502 acarolinensis_homolog_perc_id_r1
## 1503 acarolinensis_homolog_goc_score
## 1504 acarolinensis_homolog_orthology_confidence
## 1505 cporcellus_homolog_ensembl_gene
## 1506 cporcellus_homolog_associated_gene_name
## 1507 cporcellus_homolog_ensembl_peptide
## 1508 cporcellus_homolog_chromosome
## 1509 cporcellus_homolog_chrom_start
## 1510 cporcellus_homolog_chrom_end
## 1511 cporcellus_homolog_canonical_transcript_protein
## 1512 cporcellus_homolog_subtype
## 1513 cporcellus_homolog_orthology_type
## 1514 cporcellus_homolog_perc_id
## 1515 cporcellus_homolog_perc_id_r1
## 1516 cporcellus_homolog_goc_score
## 1517 cporcellus_homolog_wga_coverage
## 1518 cporcellus_homolog_orthology_confidence
## 1519 preticulata_homolog_ensembl_gene
## 1520 preticulata_homolog_associated_gene_name
## 1521 preticulata_homolog_ensembl_peptide
## 1522 preticulata_homolog_chromosome
## 1523 preticulata_homolog_chrom_start
## 1524 preticulata_homolog_chrom_end
## 1525 preticulata_homolog_canonical_transcript_protein
## 1526 preticulata_homolog_subtype
## 1527 preticulata_homolog_orthology_type
## 1528 preticulata_homolog_perc_id
## 1529 preticulata_homolog_perc_id_r1
## 1530 preticulata_homolog_goc_score
## 1531 preticulata_homolog_wga_coverage
## 1532 preticulata_homolog_orthology_confidence
## 1533 eburgeri_homolog_ensembl_gene
## 1534 eburgeri_homolog_associated_gene_name
## 1535 eburgeri_homolog_ensembl_peptide
## 1536 eburgeri_homolog_chromosome
## 1537 eburgeri_homolog_chrom_start
## 1538 eburgeri_homolog_chrom_end
## 1539 eburgeri_homolog_canonical_transcript_protein
## 1540 eburgeri_homolog_subtype
## 1541 eburgeri_homolog_orthology_type
## 1542 eburgeri_homolog_perc_id
## 1543 eburgeri_homolog_perc_id_r1
## 1544 eburgeri_homolog_wga_coverage
## 1545 eburgeri_homolog_orthology_confidence
## 1546 eeuropaeus_homolog_ensembl_gene
## 1547 eeuropaeus_homolog_associated_gene_name
## 1548 eeuropaeus_homolog_ensembl_peptide
## 1549 eeuropaeus_homolog_chromosome
## 1550 eeuropaeus_homolog_chrom_start
## 1551 eeuropaeus_homolog_chrom_end
## 1552 eeuropaeus_homolog_canonical_transcript_protein
## 1553 eeuropaeus_homolog_subtype
## 1554 eeuropaeus_homolog_orthology_type
## 1555 eeuropaeus_homolog_perc_id
## 1556 eeuropaeus_homolog_perc_id_r1
## 1557 eeuropaeus_homolog_goc_score
## 1558 eeuropaeus_homolog_wga_coverage
## 1559 eeuropaeus_homolog_orthology_confidence
## 1560 ecaballus_homolog_ensembl_gene
## 1561 ecaballus_homolog_associated_gene_name
## 1562 ecaballus_homolog_ensembl_peptide
## 1563 ecaballus_homolog_chromosome
## 1564 ecaballus_homolog_chrom_start
## 1565 ecaballus_homolog_chrom_end
## 1566 ecaballus_homolog_canonical_transcript_protein
## 1567 ecaballus_homolog_subtype
## 1568 ecaballus_homolog_orthology_type
## 1569 ecaballus_homolog_perc_id
## 1570 ecaballus_homolog_perc_id_r1
## 1571 ecaballus_homolog_goc_score
## 1572 ecaballus_homolog_wga_coverage
## 1573 ecaballus_homolog_orthology_confidence
## 1574 hhucho_homolog_ensembl_gene
## 1575 hhucho_homolog_associated_gene_name
## 1576 hhucho_homolog_ensembl_peptide
## 1577 hhucho_homolog_chromosome
## 1578 hhucho_homolog_chrom_start
## 1579 hhucho_homolog_chrom_end
## 1580 hhucho_homolog_canonical_transcript_protein
## 1581 hhucho_homolog_subtype
## 1582 hhucho_homolog_orthology_type
## 1583 hhucho_homolog_perc_id
## 1584 hhucho_homolog_perc_id_r1
## 1585 hhucho_homolog_goc_score
## 1586 hhucho_homolog_wga_coverage
## 1587 hhucho_homolog_orthology_confidence
## 1588 bihybrid_homolog_ensembl_gene
## 1589 bihybrid_homolog_associated_gene_name
## 1590 bihybrid_homolog_ensembl_peptide
## 1591 bihybrid_homolog_chromosome
## 1592 bihybrid_homolog_chrom_start
## 1593 bihybrid_homolog_chrom_end
## 1594 bihybrid_homolog_canonical_transcript_protein
## 1595 bihybrid_homolog_subtype
## 1596 bihybrid_homolog_orthology_type
## 1597 bihybrid_homolog_perc_id
## 1598 bihybrid_homolog_perc_id_r1
## 1599 bihybrid_homolog_goc_score
## 1600 bihybrid_homolog_wga_coverage
## 1601 bihybrid_homolog_orthology_confidence
## 1602 pcapensis_homolog_ensembl_gene
## 1603 pcapensis_homolog_associated_gene_name
## 1604 pcapensis_homolog_ensembl_peptide
## 1605 pcapensis_homolog_chromosome
## 1606 pcapensis_homolog_chrom_start
## 1607 pcapensis_homolog_chrom_end
## 1608 pcapensis_homolog_canonical_transcript_protein
## 1609 pcapensis_homolog_subtype
## 1610 pcapensis_homolog_orthology_type
## 1611 pcapensis_homolog_perc_id
## 1612 pcapensis_homolog_perc_id_r1
## 1613 pcapensis_homolog_goc_score
## 1614 pcapensis_homolog_wga_coverage
## 1615 pcapensis_homolog_orthology_confidence
## 1616 nnaja_homolog_ensembl_gene
## 1617 nnaja_homolog_associated_gene_name
## 1618 nnaja_homolog_ensembl_peptide
## 1619 nnaja_homolog_chromosome
## 1620 nnaja_homolog_chrom_start
## 1621 nnaja_homolog_chrom_end
## 1622 nnaja_homolog_canonical_transcript_protein
## 1623 nnaja_homolog_subtype
## 1624 nnaja_homolog_orthology_type
## 1625 nnaja_homolog_perc_id
## 1626 nnaja_homolog_perc_id_r1
## 1627 nnaja_homolog_goc_score
## 1628 nnaja_homolog_wga_coverage
## 1629 nnaja_homolog_orthology_confidence
## 1630 omelastigma_homolog_ensembl_gene
## 1631 omelastigma_homolog_associated_gene_name
## 1632 omelastigma_homolog_ensembl_peptide
## 1633 omelastigma_homolog_chromosome
## 1634 omelastigma_homolog_chrom_start
## 1635 omelastigma_homolog_chrom_end
## 1636 omelastigma_homolog_canonical_transcript_protein
## 1637 omelastigma_homolog_subtype
## 1638 omelastigma_homolog_orthology_type
## 1639 omelastigma_homolog_perc_id
## 1640 omelastigma_homolog_perc_id_r1
## 1641 omelastigma_homolog_goc_score
## 1642 omelastigma_homolog_wga_coverage
## 1643 omelastigma_homolog_orthology_confidence
## 1644 olatipes_homolog_ensembl_gene
## 1645 olatipes_homolog_associated_gene_name
## 1646 olatipes_homolog_ensembl_peptide
## 1647 olatipes_homolog_chromosome
## 1648 olatipes_homolog_chrom_start
## 1649 olatipes_homolog_chrom_end
## 1650 olatipes_homolog_canonical_transcript_protein
## 1651 olatipes_homolog_subtype
## 1652 olatipes_homolog_orthology_type
## 1653 olatipes_homolog_perc_id
## 1654 olatipes_homolog_perc_id_r1
## 1655 olatipes_homolog_goc_score
## 1656 olatipes_homolog_wga_coverage
## 1657 olatipes_homolog_orthology_confidence
## 1658 cjaponica_homolog_ensembl_gene
## 1659 cjaponica_homolog_associated_gene_name
## 1660 cjaponica_homolog_ensembl_peptide
## 1661 cjaponica_homolog_chromosome
## 1662 cjaponica_homolog_chrom_start
## 1663 cjaponica_homolog_chrom_end
## 1664 cjaponica_homolog_canonical_transcript_protein
## 1665 cjaponica_homolog_subtype
## 1666 cjaponica_homolog_orthology_type
## 1667 cjaponica_homolog_perc_id
## 1668 cjaponica_homolog_perc_id_r1
## 1669 cjaponica_homolog_goc_score
## 1670 cjaponica_homolog_wga_coverage
## 1671 cjaponica_homolog_orthology_confidence
## 1672 ojavanicus_homolog_ensembl_gene
## 1673 ojavanicus_homolog_associated_gene_name
## 1674 ojavanicus_homolog_ensembl_peptide
## 1675 ojavanicus_homolog_chromosome
## 1676 ojavanicus_homolog_chrom_start
## 1677 ojavanicus_homolog_chrom_end
## 1678 ojavanicus_homolog_canonical_transcript_protein
## 1679 ojavanicus_homolog_subtype
## 1680 ojavanicus_homolog_orthology_type
## 1681 ojavanicus_homolog_perc_id
## 1682 ojavanicus_homolog_perc_id_r1
## 1683 ojavanicus_homolog_goc_score
## 1684 ojavanicus_homolog_wga_coverage
## 1685 ojavanicus_homolog_orthology_confidence
## 1686 shabroptila_homolog_ensembl_gene
## 1687 shabroptila_homolog_associated_gene_name
## 1688 shabroptila_homolog_ensembl_peptide
## 1689 shabroptila_homolog_chromosome
## 1690 shabroptila_homolog_chrom_start
## 1691 shabroptila_homolog_chrom_end
## 1692 shabroptila_homolog_canonical_transcript_protein
## 1693 shabroptila_homolog_subtype
## 1694 shabroptila_homolog_orthology_type
## 1695 shabroptila_homolog_perc_id
## 1696 shabroptila_homolog_perc_id_r1
## 1697 shabroptila_homolog_goc_score
## 1698 shabroptila_homolog_wga_coverage
## 1699 shabroptila_homolog_orthology_confidence
## 1700 dordii_homolog_ensembl_gene
## 1701 dordii_homolog_associated_gene_name
## 1702 dordii_homolog_ensembl_peptide
## 1703 dordii_homolog_chromosome
## 1704 dordii_homolog_chrom_start
## 1705 dordii_homolog_chrom_end
## 1706 dordii_homolog_canonical_transcript_protein
## 1707 dordii_homolog_subtype
## 1708 dordii_homolog_orthology_type
## 1709 dordii_homolog_perc_id
## 1710 dordii_homolog_perc_id_r1
## 1711 dordii_homolog_goc_score
## 1712 dordii_homolog_wga_coverage
## 1713 dordii_homolog_orthology_confidence
## 1714 pcinereus_homolog_ensembl_gene
## 1715 pcinereus_homolog_associated_gene_name
## 1716 pcinereus_homolog_ensembl_peptide
## 1717 pcinereus_homolog_chromosome
## 1718 pcinereus_homolog_chrom_start
## 1719 pcinereus_homolog_chrom_end
## 1720 pcinereus_homolog_canonical_transcript_protein
## 1721 pcinereus_homolog_subtype
## 1722 pcinereus_homolog_orthology_type
## 1723 pcinereus_homolog_perc_id
## 1724 pcinereus_homolog_perc_id_r1
## 1725 pcinereus_homolog_goc_score
## 1726 pcinereus_homolog_wga_coverage
## 1727 pcinereus_homolog_orthology_confidence
## 1728 pmarinus_homolog_ensembl_gene
## 1729 pmarinus_homolog_associated_gene_name
## 1730 pmarinus_homolog_ensembl_peptide
## 1731 pmarinus_homolog_chromosome
## 1732 pmarinus_homolog_chrom_start
## 1733 pmarinus_homolog_chrom_end
## 1734 pmarinus_homolog_canonical_transcript_protein
## 1735 pmarinus_homolog_subtype
## 1736 pmarinus_homolog_orthology_type
## 1737 pmarinus_homolog_perc_id
## 1738 pmarinus_homolog_perc_id_r1
## 1739 pmarinus_homolog_wga_coverage
## 1740 pmarinus_homolog_orthology_confidence
## 1741 lcrocea_homolog_ensembl_gene
## 1742 lcrocea_homolog_associated_gene_name
## 1743 lcrocea_homolog_ensembl_peptide
## 1744 lcrocea_homolog_chromosome
## 1745 lcrocea_homolog_chrom_start
## 1746 lcrocea_homolog_chrom_end
## 1747 lcrocea_homolog_canonical_transcript_protein
## 1748 lcrocea_homolog_subtype
## 1749 lcrocea_homolog_orthology_type
## 1750 lcrocea_homolog_perc_id
## 1751 lcrocea_homolog_perc_id_r1
## 1752 lcrocea_homolog_goc_score
## 1753 lcrocea_homolog_wga_coverage
## 1754 lcrocea_homolog_orthology_confidence
## 1755 lleishanense_homolog_ensembl_gene
## 1756 lleishanense_homolog_associated_gene_name
## 1757 lleishanense_homolog_ensembl_peptide
## 1758 lleishanense_homolog_chromosome
## 1759 lleishanense_homolog_chrom_start
## 1760 lleishanense_homolog_chrom_end
## 1761 lleishanense_homolog_canonical_transcript_protein
## 1762 lleishanense_homolog_subtype
## 1763 lleishanense_homolog_orthology_type
## 1764 lleishanense_homolog_perc_id
## 1765 lleishanense_homolog_perc_id_r1
## 1766 lleishanense_homolog_goc_score
## 1767 lleishanense_homolog_wga_coverage
## 1768 lleishanense_homolog_orthology_confidence
## 1769 ppardus_homolog_ensembl_gene
## 1770 ppardus_homolog_associated_gene_name
## 1771 ppardus_homolog_ensembl_peptide
## 1772 ppardus_homolog_chromosome
## 1773 ppardus_homolog_chrom_start
## 1774 ppardus_homolog_chrom_end
## 1775 ppardus_homolog_canonical_transcript_protein
## 1776 ppardus_homolog_subtype
## 1777 ppardus_homolog_orthology_type
## 1778 ppardus_homolog_perc_id
## 1779 ppardus_homolog_perc_id_r1
## 1780 ppardus_homolog_goc_score
## 1781 ppardus_homolog_wga_coverage
## 1782 ppardus_homolog_orthology_confidence
## 1783 jjaculus_homolog_ensembl_gene
## 1784 jjaculus_homolog_associated_gene_name
## 1785 jjaculus_homolog_ensembl_peptide
## 1786 jjaculus_homolog_chromosome
## 1787 jjaculus_homolog_chrom_start
## 1788 jjaculus_homolog_chrom_end
## 1789 jjaculus_homolog_canonical_transcript_protein
## 1790 jjaculus_homolog_subtype
## 1791 jjaculus_homolog_orthology_type
## 1792 jjaculus_homolog_perc_id
## 1793 jjaculus_homolog_perc_id_r1
## 1794 jjaculus_homolog_goc_score
## 1795 jjaculus_homolog_wga_coverage
## 1796 jjaculus_homolog_orthology_confidence
## 1797 etelfairi_homolog_ensembl_gene
## 1798 etelfairi_homolog_associated_gene_name
## 1799 etelfairi_homolog_ensembl_peptide
## 1800 etelfairi_homolog_chromosome
## 1801 etelfairi_homolog_chrom_start
## 1802 etelfairi_homolog_chrom_end
## 1803 etelfairi_homolog_canonical_transcript_protein
## 1804 etelfairi_homolog_subtype
## 1805 etelfairi_homolog_orthology_type
## 1806 etelfairi_homolog_perc_id
## 1807 etelfairi_homolog_perc_id_r1
## 1808 etelfairi_homolog_goc_score
## 1809 etelfairi_homolog_wga_coverage
## 1810 etelfairi_homolog_orthology_confidence
## 1811 pleo_homolog_ensembl_gene
## 1812 pleo_homolog_associated_gene_name
## 1813 pleo_homolog_ensembl_peptide
## 1814 pleo_homolog_chromosome
## 1815 pleo_homolog_chrom_start
## 1816 pleo_homolog_chrom_end
## 1817 pleo_homolog_canonical_transcript_protein
## 1818 pleo_homolog_subtype
## 1819 pleo_homolog_orthology_type
## 1820 pleo_homolog_perc_id
## 1821 pleo_homolog_perc_id_r1
## 1822 pleo_homolog_goc_score
## 1823 pleo_homolog_wga_coverage
## 1824 pleo_homolog_orthology_confidence
## 1825 clanigera_homolog_ensembl_gene
## 1826 clanigera_homolog_associated_gene_name
## 1827 clanigera_homolog_ensembl_peptide
## 1828 clanigera_homolog_chromosome
## 1829 clanigera_homolog_chrom_start
## 1830 clanigera_homolog_chrom_end
## 1831 clanigera_homolog_canonical_transcript_protein
## 1832 clanigera_homolog_subtype
## 1833 clanigera_homolog_orthology_type
## 1834 clanigera_homolog_perc_id
## 1835 clanigera_homolog_perc_id_r1
## 1836 clanigera_homolog_goc_score
## 1837 clanigera_homolog_wga_coverage
## 1838 clanigera_homolog_orthology_confidence
## 1839 clumpus_homolog_ensembl_gene
## 1840 clumpus_homolog_associated_gene_name
## 1841 clumpus_homolog_ensembl_peptide
## 1842 clumpus_homolog_chromosome
## 1843 clumpus_homolog_chrom_start
## 1844 clumpus_homolog_chrom_end
## 1845 clumpus_homolog_canonical_transcript_protein
## 1846 clumpus_homolog_subtype
## 1847 clumpus_homolog_orthology_type
## 1848 clumpus_homolog_perc_id
## 1849 clumpus_homolog_perc_id_r1
## 1850 clumpus_homolog_goc_score
## 1851 clumpus_homolog_wga_coverage
## 1852 clumpus_homolog_orthology_confidence
## 1853 nbrichardi_homolog_ensembl_gene
## 1854 nbrichardi_homolog_associated_gene_name
## 1855 nbrichardi_homolog_ensembl_peptide
## 1856 nbrichardi_homolog_chromosome
## 1857 nbrichardi_homolog_chrom_start
## 1858 nbrichardi_homolog_chrom_end
## 1859 nbrichardi_homolog_canonical_transcript_protein
## 1860 nbrichardi_homolog_subtype
## 1861 nbrichardi_homolog_orthology_type
## 1862 nbrichardi_homolog_perc_id
## 1863 nbrichardi_homolog_perc_id_r1
## 1864 nbrichardi_homolog_goc_score
## 1865 nbrichardi_homolog_wga_coverage
## 1866 nbrichardi_homolog_orthology_confidence
## 1867 anancymaae_homolog_ensembl_gene
## 1868 anancymaae_homolog_associated_gene_name
## 1869 anancymaae_homolog_ensembl_peptide
## 1870 anancymaae_homolog_chromosome
## 1871 anancymaae_homolog_chrom_start
## 1872 anancymaae_homolog_chrom_end
## 1873 anancymaae_homolog_canonical_transcript_protein
## 1874 anancymaae_homolog_subtype
## 1875 anancymaae_homolog_orthology_type
## 1876 anancymaae_homolog_perc_id
## 1877 anancymaae_homolog_perc_id_r1
## 1878 anancymaae_homolog_goc_score
## 1879 anancymaae_homolog_wga_coverage
## 1880 anancymaae_homolog_orthology_confidence
## 1881 mmulatta_homolog_ensembl_gene
## 1882 mmulatta_homolog_associated_gene_name
## 1883 mmulatta_homolog_ensembl_peptide
## 1884 mmulatta_homolog_chromosome
## 1885 mmulatta_homolog_chrom_start
## 1886 mmulatta_homolog_chrom_end
## 1887 mmulatta_homolog_canonical_transcript_protein
## 1888 mmulatta_homolog_subtype
## 1889 mmulatta_homolog_orthology_type
## 1890 mmulatta_homolog_perc_id
## 1891 mmulatta_homolog_perc_id_r1
## 1892 mmulatta_homolog_goc_score
## 1893 mmulatta_homolog_wga_coverage
## 1894 mmulatta_homolog_orthology_confidence
## 1895 nscutatus_homolog_ensembl_gene
## 1896 nscutatus_homolog_associated_gene_name
## 1897 nscutatus_homolog_ensembl_peptide
## 1898 nscutatus_homolog_chromosome
## 1899 nscutatus_homolog_chrom_start
## 1900 nscutatus_homolog_chrom_end
## 1901 nscutatus_homolog_canonical_transcript_protein
## 1902 nscutatus_homolog_subtype
## 1903 nscutatus_homolog_orthology_type
## 1904 nscutatus_homolog_perc_id
## 1905 nscutatus_homolog_perc_id_r1
## 1906 nscutatus_homolog_goc_score
## 1907 nscutatus_homolog_wga_coverage
## 1908 nscutatus_homolog_orthology_confidence
## 1909 pnyererei_homolog_ensembl_gene
## 1910 pnyererei_homolog_associated_gene_name
## 1911 pnyererei_homolog_ensembl_peptide
## 1912 pnyererei_homolog_chromosome
## 1913 pnyererei_homolog_chrom_start
## 1914 pnyererei_homolog_chrom_end
## 1915 pnyererei_homolog_canonical_transcript_protein
## 1916 pnyererei_homolog_subtype
## 1917 pnyererei_homolog_orthology_type
## 1918 pnyererei_homolog_perc_id
## 1919 pnyererei_homolog_perc_id_r1
## 1920 pnyererei_homolog_goc_score
## 1921 pnyererei_homolog_wga_coverage
## 1922 pnyererei_homolog_orthology_confidence
## 1923 kmarmoratus_homolog_ensembl_gene
## 1924 kmarmoratus_homolog_associated_gene_name
## 1925 kmarmoratus_homolog_ensembl_peptide
## 1926 kmarmoratus_homolog_chromosome
## 1927 kmarmoratus_homolog_chrom_start
## 1928 kmarmoratus_homolog_chrom_end
## 1929 kmarmoratus_homolog_canonical_transcript_protein
## 1930 kmarmoratus_homolog_subtype
## 1931 kmarmoratus_homolog_orthology_type
## 1932 kmarmoratus_homolog_perc_id
## 1933 kmarmoratus_homolog_perc_id_r1
## 1934 kmarmoratus_homolog_goc_score
## 1935 kmarmoratus_homolog_wga_coverage
## 1936 kmarmoratus_homolog_orthology_confidence
## 1937 gfortis_homolog_ensembl_gene
## 1938 gfortis_homolog_associated_gene_name
## 1939 gfortis_homolog_ensembl_peptide
## 1940 gfortis_homolog_chromosome
## 1941 gfortis_homolog_chrom_start
## 1942 gfortis_homolog_chrom_end
## 1943 gfortis_homolog_canonical_transcript_protein
## 1944 gfortis_homolog_subtype
## 1945 gfortis_homolog_orthology_type
## 1946 gfortis_homolog_perc_id
## 1947 gfortis_homolog_perc_id_r1
## 1948 gfortis_homolog_goc_score
## 1949 gfortis_homolog_wga_coverage
## 1950 gfortis_homolog_orthology_confidence
## 1951 pvampyrus_homolog_ensembl_gene
## 1952 pvampyrus_homolog_associated_gene_name
## 1953 pvampyrus_homolog_ensembl_peptide
## 1954 pvampyrus_homolog_chromosome
## 1955 pvampyrus_homolog_chrom_start
## 1956 pvampyrus_homolog_chrom_end
## 1957 pvampyrus_homolog_canonical_transcript_protein
## 1958 pvampyrus_homolog_subtype
## 1959 pvampyrus_homolog_orthology_type
## 1960 pvampyrus_homolog_perc_id
## 1961 pvampyrus_homolog_perc_id_r1
## 1962 pvampyrus_homolog_goc_score
## 1963 pvampyrus_homolog_wga_coverage
## 1964 pvampyrus_homolog_orthology_confidence
## 1965 amexicanus_homolog_ensembl_gene
## 1966 amexicanus_homolog_associated_gene_name
## 1967 amexicanus_homolog_ensembl_peptide
## 1968 amexicanus_homolog_chromosome
## 1969 amexicanus_homolog_chrom_start
## 1970 amexicanus_homolog_chrom_end
## 1971 amexicanus_homolog_canonical_transcript_protein
## 1972 amexicanus_homolog_subtype
## 1973 amexicanus_homolog_orthology_type
## 1974 amexicanus_homolog_perc_id
## 1975 amexicanus_homolog_perc_id_r1
## 1976 amexicanus_homolog_goc_score
## 1977 amexicanus_homolog_wga_coverage
## 1978 amexicanus_homolog_orthology_confidence
## 1979 mlucifugus_homolog_ensembl_gene
## 1980 mlucifugus_homolog_associated_gene_name
## 1981 mlucifugus_homolog_ensembl_peptide
## 1982 mlucifugus_homolog_chromosome
## 1983 mlucifugus_homolog_chrom_start
## 1984 mlucifugus_homolog_chrom_end
## 1985 mlucifugus_homolog_canonical_transcript_protein
## 1986 mlucifugus_homolog_subtype
## 1987 mlucifugus_homolog_orthology_type
## 1988 mlucifugus_homolog_perc_id
## 1989 mlucifugus_homolog_perc_id_r1
## 1990 mlucifugus_homolog_goc_score
## 1991 mlucifugus_homolog_wga_coverage
## 1992 mlucifugus_homolog_orthology_confidence
## 1993 acitrinellus_homolog_ensembl_gene
## 1994 acitrinellus_homolog_associated_gene_name
## 1995 acitrinellus_homolog_ensembl_peptide
## 1996 acitrinellus_homolog_chromosome
## 1997 acitrinellus_homolog_chrom_start
## 1998 acitrinellus_homolog_chrom_end
## 1999 acitrinellus_homolog_canonical_transcript_protein
## 2000 acitrinellus_homolog_subtype
## 2001 acitrinellus_homolog_orthology_type
## 2002 acitrinellus_homolog_perc_id
## 2003 acitrinellus_homolog_perc_id_r1
## 2004 acitrinellus_homolog_goc_score
## 2005 acitrinellus_homolog_wga_coverage
## 2006 acitrinellus_homolog_orthology_confidence
## 2007 mmusculus_homolog_ensembl_gene
## 2008 mmusculus_homolog_associated_gene_name
## 2009 mmusculus_homolog_ensembl_peptide
## 2010 mmusculus_homolog_chromosome
## 2011 mmusculus_homolog_chrom_start
## 2012 mmusculus_homolog_chrom_end
## 2013 mmusculus_homolog_canonical_transcript_protein
## 2014 mmusculus_homolog_subtype
## 2015 mmusculus_homolog_orthology_type
## 2016 mmusculus_homolog_perc_id
## 2017 mmusculus_homolog_perc_id_r1
## 2018 mmusculus_homolog_goc_score
## 2019 mmusculus_homolog_wga_coverage
## 2020 mmusculus_homolog_orthology_confidence
## 2021 mmurinus_homolog_ensembl_gene
## 2022 mmurinus_homolog_associated_gene_name
## 2023 mmurinus_homolog_ensembl_peptide
## 2024 mmurinus_homolog_chromosome
## 2025 mmurinus_homolog_chrom_start
## 2026 mmurinus_homolog_chrom_end
## 2027 mmurinus_homolog_canonical_transcript_protein
## 2028 mmurinus_homolog_subtype
## 2029 mmurinus_homolog_orthology_type
## 2030 mmurinus_homolog_perc_id
## 2031 mmurinus_homolog_perc_id_r1
## 2032 mmurinus_homolog_goc_score
## 2033 mmurinus_homolog_wga_coverage
## 2034 mmurinus_homolog_orthology_confidence
## 2035 fheteroclitus_homolog_ensembl_gene
## 2036 fheteroclitus_homolog_associated_gene_name
## 2037 fheteroclitus_homolog_ensembl_peptide
## 2038 fheteroclitus_homolog_chromosome
## 2039 fheteroclitus_homolog_chrom_start
## 2040 fheteroclitus_homolog_chrom_end
## 2041 fheteroclitus_homolog_canonical_transcript_protein
## 2042 fheteroclitus_homolog_subtype
## 2043 fheteroclitus_homolog_orthology_type
## 2044 fheteroclitus_homolog_perc_id
## 2045 fheteroclitus_homolog_perc_id_r1
## 2046 fheteroclitus_homolog_goc_score
## 2047 fheteroclitus_homolog_wga_coverage
## 2048 fheteroclitus_homolog_orthology_confidence
## 2049 hgfemale_homolog_ensembl_gene
## 2050 hgfemale_homolog_associated_gene_name
## 2051 hgfemale_homolog_ensembl_peptide
## 2052 hgfemale_homolog_chromosome
## 2053 hgfemale_homolog_chrom_start
## 2054 hgfemale_homolog_chrom_end
## 2055 hgfemale_homolog_canonical_transcript_protein
## 2056 hgfemale_homolog_subtype
## 2057 hgfemale_homolog_orthology_type
## 2058 hgfemale_homolog_perc_id
## 2059 hgfemale_homolog_perc_id_r1
## 2060 hgfemale_homolog_goc_score
## 2061 hgfemale_homolog_wga_coverage
## 2062 hgfemale_homolog_orthology_confidence
## 2063 mmonoceros_homolog_ensembl_gene
## 2064 mmonoceros_homolog_associated_gene_name
## 2065 mmonoceros_homolog_ensembl_peptide
## 2066 mmonoceros_homolog_chromosome
## 2067 mmonoceros_homolog_chrom_start
## 2068 mmonoceros_homolog_chrom_end
## 2069 mmonoceros_homolog_canonical_transcript_protein
## 2070 mmonoceros_homolog_subtype
## 2071 mmonoceros_homolog_orthology_type
## 2072 mmonoceros_homolog_perc_id
## 2073 mmonoceros_homolog_perc_id_r1
## 2074 mmonoceros_homolog_goc_score
## 2075 mmonoceros_homolog_wga_coverage
## 2076 mmonoceros_homolog_orthology_confidence
## 2077 oniloticus_homolog_ensembl_gene
## 2078 oniloticus_homolog_associated_gene_name
## 2079 oniloticus_homolog_ensembl_peptide
## 2080 oniloticus_homolog_chromosome
## 2081 oniloticus_homolog_chrom_start
## 2082 oniloticus_homolog_chrom_end
## 2083 oniloticus_homolog_canonical_transcript_protein
## 2084 oniloticus_homolog_subtype
## 2085 oniloticus_homolog_orthology_type
## 2086 oniloticus_homolog_perc_id
## 2087 oniloticus_homolog_perc_id_r1
## 2088 oniloticus_homolog_goc_score
## 2089 oniloticus_homolog_wga_coverage
## 2090 oniloticus_homolog_orthology_confidence
## 2091 pmbairdii_homolog_ensembl_gene
## 2092 pmbairdii_homolog_associated_gene_name
## 2093 pmbairdii_homolog_ensembl_peptide
## 2094 pmbairdii_homolog_chromosome
## 2095 pmbairdii_homolog_chrom_start
## 2096 pmbairdii_homolog_chrom_end
## 2097 pmbairdii_homolog_canonical_transcript_protein
## 2098 pmbairdii_homolog_subtype
## 2099 pmbairdii_homolog_orthology_type
## 2100 pmbairdii_homolog_perc_id
## 2101 pmbairdii_homolog_perc_id_r1
## 2102 pmbairdii_homolog_goc_score
## 2103 pmbairdii_homolog_wga_coverage
## 2104 pmbairdii_homolog_orthology_confidence
## 2105 elucius_homolog_ensembl_gene
## 2106 elucius_homolog_associated_gene_name
## 2107 elucius_homolog_ensembl_peptide
## 2108 elucius_homolog_chromosome
## 2109 elucius_homolog_chrom_start
## 2110 elucius_homolog_chrom_end
## 2111 elucius_homolog_canonical_transcript_protein
## 2112 elucius_homolog_subtype
## 2113 elucius_homolog_orthology_type
## 2114 elucius_homolog_perc_id
## 2115 elucius_homolog_perc_id_r1
## 2116 elucius_homolog_goc_score
## 2117 elucius_homolog_wga_coverage
## 2118 elucius_homolog_orthology_confidence
## 2119 panubis_homolog_ensembl_gene
## 2120 panubis_homolog_associated_gene_name
## 2121 panubis_homolog_ensembl_peptide
## 2122 panubis_homolog_chromosome
## 2123 panubis_homolog_chrom_start
## 2124 panubis_homolog_chrom_end
## 2125 panubis_homolog_canonical_transcript_protein
## 2126 panubis_homolog_subtype
## 2127 panubis_homolog_orthology_type
## 2128 panubis_homolog_perc_id
## 2129 panubis_homolog_perc_id_r1
## 2130 panubis_homolog_goc_score
## 2131 panubis_homolog_wga_coverage
## 2132 panubis_homolog_orthology_confidence
## 2133 mdomestica_homolog_ensembl_gene
## 2134 mdomestica_homolog_associated_gene_name
## 2135 mdomestica_homolog_ensembl_peptide
## 2136 mdomestica_homolog_chromosome
## 2137 mdomestica_homolog_chrom_start
## 2138 mdomestica_homolog_chrom_end
## 2139 mdomestica_homolog_canonical_transcript_protein
## 2140 mdomestica_homolog_subtype
## 2141 mdomestica_homolog_orthology_type
## 2142 mdomestica_homolog_perc_id
## 2143 mdomestica_homolog_perc_id_r1
## 2144 mdomestica_homolog_goc_score
## 2145 mdomestica_homolog_wga_coverage
## 2146 mdomestica_homolog_orthology_confidence
## 2147 apercula_homolog_ensembl_gene
## 2148 apercula_homolog_associated_gene_name
## 2149 apercula_homolog_ensembl_peptide
## 2150 apercula_homolog_chromosome
## 2151 apercula_homolog_chrom_start
## 2152 apercula_homolog_chrom_end
## 2153 apercula_homolog_canonical_transcript_protein
## 2154 apercula_homolog_subtype
## 2155 apercula_homolog_orthology_type
## 2156 apercula_homolog_perc_id
## 2157 apercula_homolog_perc_id_r1
## 2158 apercula_homolog_goc_score
## 2159 apercula_homolog_wga_coverage
## 2160 apercula_homolog_orthology_confidence
## 2161 cpbellii_homolog_ensembl_gene
## 2162 cpbellii_homolog_associated_gene_name
## 2163 cpbellii_homolog_ensembl_peptide
## 2164 cpbellii_homolog_chromosome
## 2165 cpbellii_homolog_chrom_start
## 2166 cpbellii_homolog_chrom_end
## 2167 cpbellii_homolog_canonical_transcript_protein
## 2168 cpbellii_homolog_subtype
## 2169 cpbellii_homolog_orthology_type
## 2170 cpbellii_homolog_perc_id
## 2171 cpbellii_homolog_perc_id_r1
## 2172 cpbellii_homolog_goc_score
## 2173 cpbellii_homolog_wga_coverage
## 2174 cpbellii_homolog_orthology_confidence
## 2175 pkingsleyae_homolog_ensembl_gene
## 2176 pkingsleyae_homolog_associated_gene_name
## 2177 pkingsleyae_homolog_ensembl_peptide
## 2178 pkingsleyae_homolog_chromosome
## 2179 pkingsleyae_homolog_chrom_start
## 2180 pkingsleyae_homolog_chrom_end
## 2181 pkingsleyae_homolog_canonical_transcript_protein
## 2182 pkingsleyae_homolog_subtype
## 2183 pkingsleyae_homolog_orthology_type
## 2184 pkingsleyae_homolog_perc_id
## 2185 pkingsleyae_homolog_perc_id_r1
## 2186 pkingsleyae_homolog_goc_score
## 2187 pkingsleyae_homolog_wga_coverage
## 2188 pkingsleyae_homolog_orthology_confidence
## 2189 sscrofa_homolog_ensembl_gene
## 2190 sscrofa_homolog_associated_gene_name
## 2191 sscrofa_homolog_ensembl_peptide
## 2192 sscrofa_homolog_chromosome
## 2193 sscrofa_homolog_chrom_start
## 2194 sscrofa_homolog_chrom_end
## 2195 sscrofa_homolog_canonical_transcript_protein
## 2196 sscrofa_homolog_subtype
## 2197 sscrofa_homolog_orthology_type
## 2198 sscrofa_homolog_perc_id
## 2199 sscrofa_homolog_perc_id_r1
## 2200 sscrofa_homolog_goc_score
## 2201 sscrofa_homolog_wga_coverage
## 2202 sscrofa_homolog_orthology_confidence
## 2203 mnemestrina_homolog_ensembl_gene
## 2204 mnemestrina_homolog_associated_gene_name
## 2205 mnemestrina_homolog_ensembl_peptide
## 2206 mnemestrina_homolog_chromosome
## 2207 mnemestrina_homolog_chrom_start
## 2208 mnemestrina_homolog_chrom_end
## 2209 mnemestrina_homolog_canonical_transcript_protein
## 2210 mnemestrina_homolog_subtype
## 2211 mnemestrina_homolog_orthology_type
## 2212 mnemestrina_homolog_perc_id
## 2213 mnemestrina_homolog_perc_id_r1
## 2214 mnemestrina_homolog_goc_score
## 2215 mnemestrina_homolog_wga_coverage
## 2216 mnemestrina_homolog_orthology_confidence
## 2217 oprinceps_homolog_ensembl_gene
## 2218 oprinceps_homolog_associated_gene_name
## 2219 oprinceps_homolog_ensembl_peptide
## 2220 oprinceps_homolog_chromosome
## 2221 oprinceps_homolog_chrom_start
## 2222 oprinceps_homolog_chrom_end
## 2223 oprinceps_homolog_canonical_transcript_protein
## 2224 oprinceps_homolog_subtype
## 2225 oprinceps_homolog_orthology_type
## 2226 oprinceps_homolog_perc_id
## 2227 oprinceps_homolog_perc_id_r1
## 2228 oprinceps_homolog_goc_score
## 2229 oprinceps_homolog_wga_coverage
## 2230 oprinceps_homolog_orthology_confidence
## 2231 slucioperca_homolog_ensembl_gene
## 2232 slucioperca_homolog_associated_gene_name
## 2233 slucioperca_homolog_ensembl_peptide
## 2234 slucioperca_homolog_chromosome
## 2235 slucioperca_homolog_chrom_start
## 2236 slucioperca_homolog_chrom_end
## 2237 slucioperca_homolog_canonical_transcript_protein
## 2238 slucioperca_homolog_subtype
## 2239 slucioperca_homolog_orthology_type
## 2240 slucioperca_homolog_perc_id
## 2241 slucioperca_homolog_perc_id_r1
## 2242 slucioperca_homolog_goc_score
## 2243 slucioperca_homolog_wga_coverage
## 2244 slucioperca_homolog_orthology_confidence
## 2245 mmurdjan_homolog_ensembl_gene
## 2246 mmurdjan_homolog_associated_gene_name
## 2247 mmurdjan_homolog_ensembl_peptide
## 2248 mmurdjan_homolog_chromosome
## 2249 mmurdjan_homolog_chrom_start
## 2250 mmurdjan_homolog_chrom_end
## 2251 mmurdjan_homolog_canonical_transcript_protein
## 2252 mmurdjan_homolog_subtype
## 2253 mmurdjan_homolog_orthology_type
## 2254 mmurdjan_homolog_perc_id
## 2255 mmurdjan_homolog_perc_id_r1
## 2256 mmurdjan_homolog_goc_score
## 2257 mmurdjan_homolog_wga_coverage
## 2258 mmurdjan_homolog_orthology_confidence
## 2259 abrachyrhynchus_homolog_ensembl_gene
## 2260 abrachyrhynchus_homolog_associated_gene_name
## 2261 abrachyrhynchus_homolog_ensembl_peptide
## 2262 abrachyrhynchus_homolog_chromosome
## 2263 abrachyrhynchus_homolog_chrom_start
## 2264 abrachyrhynchus_homolog_chrom_end
## 2265 abrachyrhynchus_homolog_canonical_transcript_protein
## 2266 abrachyrhynchus_homolog_subtype
## 2267 abrachyrhynchus_homolog_orthology_type
## 2268 abrachyrhynchus_homolog_perc_id
## 2269 abrachyrhynchus_homolog_perc_id_r1
## 2270 abrachyrhynchus_homolog_goc_score
## 2271 abrachyrhynchus_homolog_wga_coverage
## 2272 abrachyrhynchus_homolog_orthology_confidence
## 2273 xmaculatus_homolog_ensembl_gene
## 2274 xmaculatus_homolog_associated_gene_name
## 2275 xmaculatus_homolog_ensembl_peptide
## 2276 xmaculatus_homolog_chromosome
## 2277 xmaculatus_homolog_chrom_start
## 2278 xmaculatus_homolog_chrom_end
## 2279 xmaculatus_homolog_canonical_transcript_protein
## 2280 xmaculatus_homolog_subtype
## 2281 xmaculatus_homolog_orthology_type
## 2282 xmaculatus_homolog_perc_id
## 2283 xmaculatus_homolog_perc_id_r1
## 2284 xmaculatus_homolog_goc_score
## 2285 xmaculatus_homolog_wga_coverage
## 2286 xmaculatus_homolog_orthology_confidence
## 2287 oanatinus_homolog_ensembl_gene
## 2288 oanatinus_homolog_associated_gene_name
## 2289 oanatinus_homolog_ensembl_peptide
## 2290 oanatinus_homolog_chromosome
## 2291 oanatinus_homolog_chrom_start
## 2292 oanatinus_homolog_chrom_end
## 2293 oanatinus_homolog_canonical_transcript_protein
## 2294 oanatinus_homolog_subtype
## 2295 oanatinus_homolog_orthology_type
## 2296 oanatinus_homolog_perc_id
## 2297 oanatinus_homolog_perc_id_r1
## 2298 oanatinus_homolog_goc_score
## 2299 oanatinus_homolog_wga_coverage
## 2300 oanatinus_homolog_orthology_confidence
## 2301 umaritimus_homolog_ensembl_gene
## 2302 umaritimus_homolog_associated_gene_name
## 2303 umaritimus_homolog_ensembl_peptide
## 2304 umaritimus_homolog_chromosome
## 2305 umaritimus_homolog_chrom_start
## 2306 umaritimus_homolog_chrom_end
## 2307 umaritimus_homolog_canonical_transcript_protein
## 2308 umaritimus_homolog_subtype
## 2309 umaritimus_homolog_orthology_type
## 2310 umaritimus_homolog_perc_id
## 2311 umaritimus_homolog_perc_id_r1
## 2312 umaritimus_homolog_goc_score
## 2313 umaritimus_homolog_wga_coverage
## 2314 umaritimus_homolog_orthology_confidence
## 2315 mochrogaster_homolog_ensembl_gene
## 2316 mochrogaster_homolog_associated_gene_name
## 2317 mochrogaster_homolog_ensembl_peptide
## 2318 mochrogaster_homolog_chromosome
## 2319 mochrogaster_homolog_chrom_start
## 2320 mochrogaster_homolog_chrom_end
## 2321 mochrogaster_homolog_canonical_transcript_protein
## 2322 mochrogaster_homolog_subtype
## 2323 mochrogaster_homolog_orthology_type
## 2324 mochrogaster_homolog_perc_id
## 2325 mochrogaster_homolog_perc_id_r1
## 2326 mochrogaster_homolog_goc_score
## 2327 mochrogaster_homolog_wga_coverage
## 2328 mochrogaster_homolog_orthology_confidence
## 2329 ocuniculus_homolog_ensembl_gene
## 2330 ocuniculus_homolog_associated_gene_name
## 2331 ocuniculus_homolog_ensembl_peptide
## 2332 ocuniculus_homolog_chromosome
## 2333 ocuniculus_homolog_chrom_start
## 2334 ocuniculus_homolog_chrom_end
## 2335 ocuniculus_homolog_canonical_transcript_protein
## 2336 ocuniculus_homolog_subtype
## 2337 ocuniculus_homolog_orthology_type
## 2338 ocuniculus_homolog_perc_id
## 2339 ocuniculus_homolog_perc_id_r1
## 2340 ocuniculus_homolog_goc_score
## 2341 ocuniculus_homolog_wga_coverage
## 2342 ocuniculus_homolog_orthology_confidence
## 2343 omykiss_homolog_ensembl_gene
## 2344 omykiss_homolog_associated_gene_name
## 2345 omykiss_homolog_ensembl_peptide
## 2346 omykiss_homolog_chromosome
## 2347 omykiss_homolog_chrom_start
## 2348 omykiss_homolog_chrom_end
## 2349 omykiss_homolog_canonical_transcript_protein
## 2350 omykiss_homolog_subtype
## 2351 omykiss_homolog_orthology_type
## 2352 omykiss_homolog_perc_id
## 2353 omykiss_homolog_perc_id_r1
## 2354 omykiss_homolog_goc_score
## 2355 omykiss_homolog_orthology_confidence
## 2356 rnorvegicus_homolog_ensembl_gene
## 2357 rnorvegicus_homolog_associated_gene_name
## 2358 rnorvegicus_homolog_ensembl_peptide
## 2359 rnorvegicus_homolog_chromosome
## 2360 rnorvegicus_homolog_chrom_start
## 2361 rnorvegicus_homolog_chrom_end
## 2362 rnorvegicus_homolog_canonical_transcript_protein
## 2363 rnorvegicus_homolog_subtype
## 2364 rnorvegicus_homolog_orthology_type
## 2365 rnorvegicus_homolog_perc_id
## 2366 rnorvegicus_homolog_perc_id_r1
## 2367 rnorvegicus_homolog_goc_score
## 2368 rnorvegicus_homolog_wga_coverage
## 2369 rnorvegicus_homolog_orthology_confidence
## 2370 vvulpes_homolog_ensembl_gene
## 2371 vvulpes_homolog_associated_gene_name
## 2372 vvulpes_homolog_ensembl_peptide
## 2373 vvulpes_homolog_chromosome
## 2374 vvulpes_homolog_chrom_start
## 2375 vvulpes_homolog_chrom_end
## 2376 vvulpes_homolog_canonical_transcript_protein
## 2377 vvulpes_homolog_subtype
## 2378 vvulpes_homolog_orthology_type
## 2379 vvulpes_homolog_perc_id
## 2380 vvulpes_homolog_perc_id_r1
## 2381 vvulpes_homolog_goc_score
## 2382 vvulpes_homolog_wga_coverage
## 2383 vvulpes_homolog_orthology_confidence
## 2384 pnattereri_homolog_ensembl_gene
## 2385 pnattereri_homolog_associated_gene_name
## 2386 pnattereri_homolog_ensembl_peptide
## 2387 pnattereri_homolog_chromosome
## 2388 pnattereri_homolog_chrom_start
## 2389 pnattereri_homolog_chrom_end
## 2390 pnattereri_homolog_canonical_transcript_protein
## 2391 pnattereri_homolog_subtype
## 2392 pnattereri_homolog_orthology_type
## 2393 pnattereri_homolog_perc_id
## 2394 pnattereri_homolog_perc_id_r1
## 2395 pnattereri_homolog_goc_score
## 2396 pnattereri_homolog_wga_coverage
## 2397 pnattereri_homolog_orthology_confidence
## 2398 ecalabaricus_homolog_ensembl_gene
## 2399 ecalabaricus_homolog_associated_gene_name
## 2400 ecalabaricus_homolog_ensembl_peptide
## 2401 ecalabaricus_homolog_chromosome
## 2402 ecalabaricus_homolog_chrom_start
## 2403 ecalabaricus_homolog_chrom_end
## 2404 ecalabaricus_homolog_canonical_transcript_protein
## 2405 ecalabaricus_homolog_subtype
## 2406 ecalabaricus_homolog_orthology_type
## 2407 ecalabaricus_homolog_perc_id
## 2408 ecalabaricus_homolog_perc_id_r1
## 2409 ecalabaricus_homolog_goc_score
## 2410 ecalabaricus_homolog_wga_coverage
## 2411 ecalabaricus_homolog_orthology_confidence
## 2412 mcaroli_homolog_ensembl_gene
## 2413 mcaroli_homolog_associated_gene_name
## 2414 mcaroli_homolog_ensembl_peptide
## 2415 mcaroli_homolog_chromosome
## 2416 mcaroli_homolog_chrom_start
## 2417 mcaroli_homolog_chrom_end
## 2418 mcaroli_homolog_canonical_transcript_protein
## 2419 mcaroli_homolog_subtype
## 2420 mcaroli_homolog_orthology_type
## 2421 mcaroli_homolog_perc_id
## 2422 mcaroli_homolog_perc_id_r1
## 2423 mcaroli_homolog_goc_score
## 2424 mcaroli_homolog_wga_coverage
## 2425 mcaroli_homolog_orthology_confidence
## 2426 scerevisiae_homolog_ensembl_gene
## 2427 scerevisiae_homolog_associated_gene_name
## 2428 scerevisiae_homolog_ensembl_peptide
## 2429 scerevisiae_homolog_chromosome
## 2430 scerevisiae_homolog_chrom_start
## 2431 scerevisiae_homolog_chrom_end
## 2432 scerevisiae_homolog_canonical_transcript_protein
## 2433 scerevisiae_homolog_subtype
## 2434 scerevisiae_homolog_orthology_type
## 2435 scerevisiae_homolog_perc_id
## 2436 scerevisiae_homolog_perc_id_r1
## 2437 scerevisiae_homolog_orthology_confidence
## 2438 platipinna_homolog_ensembl_gene
## 2439 platipinna_homolog_associated_gene_name
## 2440 platipinna_homolog_ensembl_peptide
## 2441 platipinna_homolog_chromosome
## 2442 platipinna_homolog_chrom_start
## 2443 platipinna_homolog_chrom_end
## 2444 platipinna_homolog_canonical_transcript_protein
## 2445 platipinna_homolog_subtype
## 2446 platipinna_homolog_orthology_type
## 2447 platipinna_homolog_perc_id
## 2448 platipinna_homolog_perc_id_r1
## 2449 platipinna_homolog_goc_score
## 2450 platipinna_homolog_wga_coverage
## 2451 platipinna_homolog_orthology_confidence
## 2452 oarambouillet_homolog_ensembl_gene
## 2453 oarambouillet_homolog_associated_gene_name
## 2454 oarambouillet_homolog_ensembl_peptide
## 2455 oarambouillet_homolog_chromosome
## 2456 oarambouillet_homolog_chrom_start
## 2457 oarambouillet_homolog_chrom_end
## 2458 oarambouillet_homolog_canonical_transcript_protein
## 2459 oarambouillet_homolog_subtype
## 2460 oarambouillet_homolog_orthology_type
## 2461 oarambouillet_homolog_perc_id
## 2462 oarambouillet_homolog_perc_id_r1
## 2463 oarambouillet_homolog_goc_score
## 2464 oarambouillet_homolog_wga_coverage
## 2465 oarambouillet_homolog_orthology_confidence
## 2466 cvariegatus_homolog_ensembl_gene
## 2467 cvariegatus_homolog_associated_gene_name
## 2468 cvariegatus_homolog_ensembl_peptide
## 2469 cvariegatus_homolog_chromosome
## 2470 cvariegatus_homolog_chrom_start
## 2471 cvariegatus_homolog_chrom_end
## 2472 cvariegatus_homolog_canonical_transcript_protein
## 2473 cvariegatus_homolog_subtype
## 2474 cvariegatus_homolog_orthology_type
## 2475 cvariegatus_homolog_perc_id
## 2476 cvariegatus_homolog_perc_id_r1
## 2477 cvariegatus_homolog_goc_score
## 2478 cvariegatus_homolog_wga_coverage
## 2479 cvariegatus_homolog_orthology_confidence
## 2480 saraneus_homolog_ensembl_gene
## 2481 saraneus_homolog_associated_gene_name
## 2482 saraneus_homolog_ensembl_peptide
## 2483 saraneus_homolog_chromosome
## 2484 saraneus_homolog_chrom_start
## 2485 saraneus_homolog_chrom_end
## 2486 saraneus_homolog_canonical_transcript_protein
## 2487 saraneus_homolog_subtype
## 2488 saraneus_homolog_orthology_type
## 2489 saraneus_homolog_perc_id
## 2490 saraneus_homolog_perc_id_r1
## 2491 saraneus_homolog_goc_score
## 2492 saraneus_homolog_wga_coverage
## 2493 saraneus_homolog_orthology_confidence
## 2494 mpahari_homolog_ensembl_gene
## 2495 mpahari_homolog_associated_gene_name
## 2496 mpahari_homolog_ensembl_peptide
## 2497 mpahari_homolog_chromosome
## 2498 mpahari_homolog_chrom_start
## 2499 mpahari_homolog_chrom_end
## 2500 mpahari_homolog_canonical_transcript_protein
## 2501 mpahari_homolog_subtype
## 2502 mpahari_homolog_orthology_type
## 2503 mpahari_homolog_perc_id
## 2504 mpahari_homolog_perc_id_r1
## 2505 mpahari_homolog_goc_score
## 2506 mpahari_homolog_wga_coverage
## 2507 mpahari_homolog_orthology_confidence
## 2508 bsplendens_homolog_ensembl_gene
## 2509 bsplendens_homolog_associated_gene_name
## 2510 bsplendens_homolog_ensembl_peptide
## 2511 bsplendens_homolog_chromosome
## 2512 bsplendens_homolog_chrom_start
## 2513 bsplendens_homolog_chrom_end
## 2514 bsplendens_homolog_canonical_transcript_protein
## 2515 bsplendens_homolog_subtype
## 2516 bsplendens_homolog_orthology_type
## 2517 bsplendens_homolog_perc_id
## 2518 bsplendens_homolog_perc_id_r1
## 2519 bsplendens_homolog_goc_score
## 2520 bsplendens_homolog_wga_coverage
## 2521 bsplendens_homolog_orthology_confidence
## 2522 mmoschiferus_homolog_ensembl_gene
## 2523 mmoschiferus_homolog_associated_gene_name
## 2524 mmoschiferus_homolog_ensembl_peptide
## 2525 mmoschiferus_homolog_chromosome
## 2526 mmoschiferus_homolog_chrom_start
## 2527 mmoschiferus_homolog_chrom_end
## 2528 mmoschiferus_homolog_canonical_transcript_protein
## 2529 mmoschiferus_homolog_subtype
## 2530 mmoschiferus_homolog_orthology_type
## 2531 mmoschiferus_homolog_perc_id
## 2532 mmoschiferus_homolog_perc_id_r1
## 2533 mmoschiferus_homolog_goc_score
## 2534 mmoschiferus_homolog_wga_coverage
## 2535 mmoschiferus_homolog_orthology_confidence
## 2536 choffmanni_homolog_ensembl_gene
## 2537 choffmanni_homolog_associated_gene_name
## 2538 choffmanni_homolog_ensembl_peptide
## 2539 choffmanni_homolog_chromosome
## 2540 choffmanni_homolog_chrom_start
## 2541 choffmanni_homolog_chrom_end
## 2542 choffmanni_homolog_canonical_transcript_protein
## 2543 choffmanni_homolog_subtype
## 2544 choffmanni_homolog_orthology_type
## 2545 choffmanni_homolog_perc_id
## 2546 choffmanni_homolog_perc_id_r1
## 2547 choffmanni_homolog_goc_score
## 2548 choffmanni_homolog_wga_coverage
## 2549 choffmanni_homolog_orthology_confidence
## 2550 catys_homolog_ensembl_gene
## 2551 catys_homolog_associated_gene_name
## 2552 catys_homolog_ensembl_peptide
## 2553 catys_homolog_chromosome
## 2554 catys_homolog_chrom_start
## 2555 catys_homolog_chrom_end
## 2556 catys_homolog_canonical_transcript_protein
## 2557 catys_homolog_subtype
## 2558 catys_homolog_orthology_type
## 2559 catys_homolog_perc_id
## 2560 catys_homolog_perc_id_r1
## 2561 catys_homolog_goc_score
## 2562 catys_homolog_wga_coverage
## 2563 catys_homolog_orthology_confidence
## 2564 pcatodon_homolog_ensembl_gene
## 2565 pcatodon_homolog_associated_gene_name
## 2566 pcatodon_homolog_ensembl_peptide
## 2567 pcatodon_homolog_chromosome
## 2568 pcatodon_homolog_chrom_start
## 2569 pcatodon_homolog_chrom_end
## 2570 pcatodon_homolog_canonical_transcript_protein
## 2571 pcatodon_homolog_subtype
## 2572 pcatodon_homolog_orthology_type
## 2573 pcatodon_homolog_perc_id
## 2574 pcatodon_homolog_perc_id_r1
## 2575 pcatodon_homolog_goc_score
## 2576 pcatodon_homolog_wga_coverage
## 2577 pcatodon_homolog_orthology_confidence
## 2578 apolyacanthus_homolog_ensembl_gene
## 2579 apolyacanthus_homolog_associated_gene_name
## 2580 apolyacanthus_homolog_ensembl_peptide
## 2581 apolyacanthus_homolog_chromosome
## 2582 apolyacanthus_homolog_chrom_start
## 2583 apolyacanthus_homolog_chrom_end
## 2584 apolyacanthus_homolog_canonical_transcript_protein
## 2585 apolyacanthus_homolog_subtype
## 2586 apolyacanthus_homolog_orthology_type
## 2587 apolyacanthus_homolog_perc_id
## 2588 apolyacanthus_homolog_perc_id_r1
## 2589 apolyacanthus_homolog_goc_score
## 2590 apolyacanthus_homolog_wga_coverage
## 2591 apolyacanthus_homolog_orthology_confidence
## 2592 loculatus_homolog_ensembl_gene
## 2593 loculatus_homolog_associated_gene_name
## 2594 loculatus_homolog_ensembl_peptide
## 2595 loculatus_homolog_chromosome
## 2596 loculatus_homolog_chrom_start
## 2597 loculatus_homolog_chrom_end
## 2598 loculatus_homolog_canonical_transcript_protein
## 2599 loculatus_homolog_subtype
## 2600 loculatus_homolog_orthology_type
## 2601 loculatus_homolog_perc_id
## 2602 loculatus_homolog_perc_id_r1
## 2603 loculatus_homolog_goc_score
## 2604 loculatus_homolog_wga_coverage
## 2605 loculatus_homolog_orthology_confidence
## 2606 itridecemlineatus_homolog_ensembl_gene
## 2607 itridecemlineatus_homolog_associated_gene_name
## 2608 itridecemlineatus_homolog_ensembl_peptide
## 2609 itridecemlineatus_homolog_chromosome
## 2610 itridecemlineatus_homolog_chrom_start
## 2611 itridecemlineatus_homolog_chrom_end
## 2612 itridecemlineatus_homolog_canonical_transcript_protein
## 2613 itridecemlineatus_homolog_subtype
## 2614 itridecemlineatus_homolog_orthology_type
## 2615 itridecemlineatus_homolog_perc_id
## 2616 itridecemlineatus_homolog_perc_id_r1
## 2617 itridecemlineatus_homolog_goc_score
## 2618 itridecemlineatus_homolog_wga_coverage
## 2619 itridecemlineatus_homolog_orthology_confidence
## 2620 mspicilegus_homolog_ensembl_gene
## 2621 mspicilegus_homolog_associated_gene_name
## 2622 mspicilegus_homolog_ensembl_peptide
## 2623 mspicilegus_homolog_chromosome
## 2624 mspicilegus_homolog_chrom_start
## 2625 mspicilegus_homolog_chrom_end
## 2626 mspicilegus_homolog_canonical_transcript_protein
## 2627 mspicilegus_homolog_subtype
## 2628 mspicilegus_homolog_orthology_type
## 2629 mspicilegus_homolog_perc_id
## 2630 mspicilegus_homolog_perc_id_r1
## 2631 mspicilegus_homolog_goc_score
## 2632 mspicilegus_homolog_wga_coverage
## 2633 mspicilegus_homolog_orthology_confidence
## 2634 gaculeatus_homolog_ensembl_gene
## 2635 gaculeatus_homolog_associated_gene_name
## 2636 gaculeatus_homolog_ensembl_peptide
## 2637 gaculeatus_homolog_chromosome
## 2638 gaculeatus_homolog_chrom_start
## 2639 gaculeatus_homolog_chrom_end
## 2640 gaculeatus_homolog_canonical_transcript_protein
## 2641 gaculeatus_homolog_subtype
## 2642 gaculeatus_homolog_orthology_type
## 2643 gaculeatus_homolog_perc_id
## 2644 gaculeatus_homolog_perc_id_r1
## 2645 gaculeatus_homolog_goc_score
## 2646 gaculeatus_homolog_wga_coverage
## 2647 gaculeatus_homolog_orthology_confidence
## 2648 pabelii_homolog_ensembl_gene
## 2649 pabelii_homolog_associated_gene_name
## 2650 pabelii_homolog_ensembl_peptide
## 2651 pabelii_homolog_chromosome
## 2652 pabelii_homolog_chrom_start
## 2653 pabelii_homolog_chrom_end
## 2654 pabelii_homolog_canonical_transcript_protein
## 2655 pabelii_homolog_subtype
## 2656 pabelii_homolog_orthology_type
## 2657 pabelii_homolog_perc_id
## 2658 pabelii_homolog_perc_id_r1
## 2659 pabelii_homolog_goc_score
## 2660 pabelii_homolog_wga_coverage
## 2661 pabelii_homolog_orthology_confidence
## 2662 csyrichta_homolog_ensembl_gene
## 2663 csyrichta_homolog_associated_gene_name
## 2664 csyrichta_homolog_ensembl_peptide
## 2665 csyrichta_homolog_chromosome
## 2666 csyrichta_homolog_chrom_start
## 2667 csyrichta_homolog_chrom_end
## 2668 csyrichta_homolog_canonical_transcript_protein
## 2669 csyrichta_homolog_subtype
## 2670 csyrichta_homolog_orthology_type
## 2671 csyrichta_homolog_perc_id
## 2672 csyrichta_homolog_perc_id_r1
## 2673 csyrichta_homolog_goc_score
## 2674 csyrichta_homolog_wga_coverage
## 2675 csyrichta_homolog_orthology_confidence
## 2676 sharrisii_homolog_ensembl_gene
## 2677 sharrisii_homolog_associated_gene_name
## 2678 sharrisii_homolog_ensembl_peptide
## 2679 sharrisii_homolog_chromosome
## 2680 sharrisii_homolog_chrom_start
## 2681 sharrisii_homolog_chrom_end
## 2682 sharrisii_homolog_canonical_transcript_protein
## 2683 sharrisii_homolog_subtype
## 2684 sharrisii_homolog_orthology_type
## 2685 sharrisii_homolog_perc_id
## 2686 sharrisii_homolog_perc_id_r1
## 2687 sharrisii_homolog_goc_score
## 2688 sharrisii_homolog_orthology_confidence
## 2689 tnigroviridis_homolog_ensembl_gene
## 2690 tnigroviridis_homolog_associated_gene_name
## 2691 tnigroviridis_homolog_ensembl_peptide
## 2692 tnigroviridis_homolog_chromosome
## 2693 tnigroviridis_homolog_chrom_start
## 2694 tnigroviridis_homolog_chrom_end
## 2695 tnigroviridis_homolog_canonical_transcript_protein
## 2696 tnigroviridis_homolog_subtype
## 2697 tnigroviridis_homolog_orthology_type
## 2698 tnigroviridis_homolog_perc_id
## 2699 tnigroviridis_homolog_perc_id_r1
## 2700 tnigroviridis_homolog_goc_score
## 2701 tnigroviridis_homolog_wga_coverage
## 2702 tnigroviridis_homolog_orthology_confidence
## 2703 tctriunguis_homolog_ensembl_gene
## 2704 tctriunguis_homolog_associated_gene_name
## 2705 tctriunguis_homolog_ensembl_peptide
## 2706 tctriunguis_homolog_chromosome
## 2707 tctriunguis_homolog_chrom_start
## 2708 tctriunguis_homolog_chrom_end
## 2709 tctriunguis_homolog_canonical_transcript_protein
## 2710 tctriunguis_homolog_subtype
## 2711 tctriunguis_homolog_orthology_type
## 2712 tctriunguis_homolog_perc_id
## 2713 tctriunguis_homolog_perc_id_r1
## 2714 tctriunguis_homolog_goc_score
## 2715 tctriunguis_homolog_wga_coverage
## 2716 tctriunguis_homolog_orthology_confidence
## 2717 ptaltaica_homolog_ensembl_gene
## 2718 ptaltaica_homolog_associated_gene_name
## 2719 ptaltaica_homolog_ensembl_peptide
## 2720 ptaltaica_homolog_chromosome
## 2721 ptaltaica_homolog_chrom_start
## 2722 ptaltaica_homolog_chrom_end
## 2723 ptaltaica_homolog_canonical_transcript_protein
## 2724 ptaltaica_homolog_subtype
## 2725 ptaltaica_homolog_orthology_type
## 2726 ptaltaica_homolog_perc_id
## 2727 ptaltaica_homolog_perc_id_r1
## 2728 ptaltaica_homolog_goc_score
## 2729 ptaltaica_homolog_wga_coverage
## 2730 ptaltaica_homolog_orthology_confidence
## 2731 hcomes_homolog_ensembl_gene
## 2732 hcomes_homolog_associated_gene_name
## 2733 hcomes_homolog_ensembl_peptide
## 2734 hcomes_homolog_chromosome
## 2735 hcomes_homolog_chrom_start
## 2736 hcomes_homolog_chrom_end
## 2737 hcomes_homolog_canonical_transcript_protein
## 2738 hcomes_homolog_subtype
## 2739 hcomes_homolog_orthology_type
## 2740 hcomes_homolog_perc_id
## 2741 hcomes_homolog_perc_id_r1
## 2742 hcomes_homolog_goc_score
## 2743 hcomes_homolog_wga_coverage
## 2744 hcomes_homolog_orthology_confidence
## 2745 csemilaevis_homolog_ensembl_gene
## 2746 csemilaevis_homolog_associated_gene_name
## 2747 csemilaevis_homolog_ensembl_peptide
## 2748 csemilaevis_homolog_chromosome
## 2749 csemilaevis_homolog_chrom_start
## 2750 csemilaevis_homolog_chrom_end
## 2751 csemilaevis_homolog_canonical_transcript_protein
## 2752 csemilaevis_homolog_subtype
## 2753 csemilaevis_homolog_orthology_type
## 2754 csemilaevis_homolog_perc_id
## 2755 csemilaevis_homolog_perc_id_r1
## 2756 csemilaevis_homolog_goc_score
## 2757 csemilaevis_homolog_wga_coverage
## 2758 csemilaevis_homolog_orthology_confidence
## 2759 tbelangeri_homolog_ensembl_gene
## 2760 tbelangeri_homolog_associated_gene_name
## 2761 tbelangeri_homolog_ensembl_peptide
## 2762 tbelangeri_homolog_chromosome
## 2763 tbelangeri_homolog_chrom_start
## 2764 tbelangeri_homolog_chrom_end
## 2765 tbelangeri_homolog_canonical_transcript_protein
## 2766 tbelangeri_homolog_subtype
## 2767 tbelangeri_homolog_orthology_type
## 2768 tbelangeri_homolog_perc_id
## 2769 tbelangeri_homolog_perc_id_r1
## 2770 tbelangeri_homolog_goc_score
## 2771 tbelangeri_homolog_wga_coverage
## 2772 tbelangeri_homolog_orthology_confidence
## 2773 xtropicalis_homolog_ensembl_gene
## 2774 xtropicalis_homolog_associated_gene_name
## 2775 xtropicalis_homolog_ensembl_peptide
## 2776 xtropicalis_homolog_chromosome
## 2777 xtropicalis_homolog_chrom_start
## 2778 xtropicalis_homolog_chrom_end
## 2779 xtropicalis_homolog_canonical_transcript_protein
## 2780 xtropicalis_homolog_subtype
## 2781 xtropicalis_homolog_orthology_type
## 2782 xtropicalis_homolog_perc_id
## 2783 xtropicalis_homolog_perc_id_r1
## 2784 xtropicalis_homolog_goc_score
## 2785 xtropicalis_homolog_orthology_confidence
## 2786 spunctatus_homolog_ensembl_gene
## 2787 spunctatus_homolog_associated_gene_name
## 2788 spunctatus_homolog_ensembl_peptide
## 2789 spunctatus_homolog_chromosome
## 2790 spunctatus_homolog_chrom_start
## 2791 spunctatus_homolog_chrom_end
## 2792 spunctatus_homolog_canonical_transcript_protein
## 2793 spunctatus_homolog_subtype
## 2794 spunctatus_homolog_orthology_type
## 2795 spunctatus_homolog_perc_id
## 2796 spunctatus_homolog_perc_id_r1
## 2797 spunctatus_homolog_goc_score
## 2798 spunctatus_homolog_wga_coverage
## 2799 spunctatus_homolog_orthology_confidence
## 2800 smaximus_homolog_ensembl_gene
## 2801 smaximus_homolog_associated_gene_name
## 2802 smaximus_homolog_ensembl_peptide
## 2803 smaximus_homolog_chromosome
## 2804 smaximus_homolog_chrom_start
## 2805 smaximus_homolog_chrom_end
## 2806 smaximus_homolog_canonical_transcript_protein
## 2807 smaximus_homolog_subtype
## 2808 smaximus_homolog_orthology_type
## 2809 smaximus_homolog_perc_id
## 2810 smaximus_homolog_perc_id_r1
## 2811 smaximus_homolog_goc_score
## 2812 smaximus_homolog_orthology_confidence
## 2813 mgallopavo_homolog_ensembl_gene
## 2814 mgallopavo_homolog_associated_gene_name
## 2815 mgallopavo_homolog_ensembl_peptide
## 2816 mgallopavo_homolog_chromosome
## 2817 mgallopavo_homolog_chrom_start
## 2818 mgallopavo_homolog_chrom_end
## 2819 mgallopavo_homolog_canonical_transcript_protein
## 2820 mgallopavo_homolog_subtype
## 2821 mgallopavo_homolog_orthology_type
## 2822 mgallopavo_homolog_perc_id
## 2823 mgallopavo_homolog_perc_id_r1
## 2824 mgallopavo_homolog_goc_score
## 2825 mgallopavo_homolog_orthology_confidence
## 2826 nfurzeri_homolog_ensembl_gene
## 2827 nfurzeri_homolog_associated_gene_name
## 2828 nfurzeri_homolog_ensembl_peptide
## 2829 nfurzeri_homolog_chromosome
## 2830 nfurzeri_homolog_chrom_start
## 2831 nfurzeri_homolog_chrom_end
## 2832 nfurzeri_homolog_canonical_transcript_protein
## 2833 nfurzeri_homolog_subtype
## 2834 nfurzeri_homolog_orthology_type
## 2835 nfurzeri_homolog_perc_id
## 2836 nfurzeri_homolog_perc_id_r1
## 2837 nfurzeri_homolog_goc_score
## 2838 nfurzeri_homolog_wga_coverage
## 2839 nfurzeri_homolog_orthology_confidence
## 2840 ngalili_homolog_ensembl_gene
## 2841 ngalili_homolog_associated_gene_name
## 2842 ngalili_homolog_ensembl_peptide
## 2843 ngalili_homolog_chromosome
## 2844 ngalili_homolog_chrom_start
## 2845 ngalili_homolog_chrom_end
## 2846 ngalili_homolog_canonical_transcript_protein
## 2847 ngalili_homolog_subtype
## 2848 ngalili_homolog_orthology_type
## 2849 ngalili_homolog_perc_id
## 2850 ngalili_homolog_perc_id_r1
## 2851 ngalili_homolog_goc_score
## 2852 ngalili_homolog_wga_coverage
## 2853 ngalili_homolog_orthology_confidence
## 2854 psinus_homolog_ensembl_gene
## 2855 psinus_homolog_associated_gene_name
## 2856 psinus_homolog_ensembl_peptide
## 2857 psinus_homolog_chromosome
## 2858 psinus_homolog_chrom_start
## 2859 psinus_homolog_chrom_end
## 2860 psinus_homolog_canonical_transcript_protein
## 2861 psinus_homolog_subtype
## 2862 psinus_homolog_orthology_type
## 2863 psinus_homolog_perc_id
## 2864 psinus_homolog_perc_id_r1
## 2865 psinus_homolog_goc_score
## 2866 psinus_homolog_wga_coverage
## 2867 psinus_homolog_orthology_confidence
## 2868 csabaeus_homolog_ensembl_gene
## 2869 csabaeus_homolog_associated_gene_name
## 2870 csabaeus_homolog_ensembl_peptide
## 2871 csabaeus_homolog_chromosome
## 2872 csabaeus_homolog_chrom_start
## 2873 csabaeus_homolog_chrom_end
## 2874 csabaeus_homolog_canonical_transcript_protein
## 2875 csabaeus_homolog_subtype
## 2876 csabaeus_homolog_orthology_type
## 2877 csabaeus_homolog_perc_id
## 2878 csabaeus_homolog_perc_id_r1
## 2879 csabaeus_homolog_goc_score
## 2880 csabaeus_homolog_wga_coverage
## 2881 csabaeus_homolog_orthology_confidence
## 2882 neugenii_homolog_ensembl_gene
## 2883 neugenii_homolog_associated_gene_name
## 2884 neugenii_homolog_ensembl_peptide
## 2885 neugenii_homolog_chromosome
## 2886 neugenii_homolog_chrom_start
## 2887 neugenii_homolog_chrom_end
## 2888 neugenii_homolog_canonical_transcript_protein
## 2889 neugenii_homolog_subtype
## 2890 neugenii_homolog_orthology_type
## 2891 neugenii_homolog_perc_id
## 2892 neugenii_homolog_perc_id_r1
## 2893 neugenii_homolog_goc_score
## 2894 neugenii_homolog_wga_coverage
## 2895 neugenii_homolog_orthology_confidence
## 2896 cjacchus_homolog_ensembl_gene
## 2897 cjacchus_homolog_associated_gene_name
## 2898 cjacchus_homolog_ensembl_peptide
## 2899 cjacchus_homolog_chromosome
## 2900 cjacchus_homolog_chrom_start
## 2901 cjacchus_homolog_chrom_end
## 2902 cjacchus_homolog_canonical_transcript_protein
## 2903 cjacchus_homolog_subtype
## 2904 cjacchus_homolog_orthology_type
## 2905 cjacchus_homolog_perc_id
## 2906 cjacchus_homolog_perc_id_r1
## 2907 cjacchus_homolog_goc_score
## 2908 cjacchus_homolog_wga_coverage
## 2909 cjacchus_homolog_orthology_confidence
## 2910 bmutus_homolog_ensembl_gene
## 2911 bmutus_homolog_associated_gene_name
## 2912 bmutus_homolog_ensembl_peptide
## 2913 bmutus_homolog_chromosome
## 2914 bmutus_homolog_chrom_start
## 2915 bmutus_homolog_chrom_end
## 2916 bmutus_homolog_canonical_transcript_protein
## 2917 bmutus_homolog_subtype
## 2918 bmutus_homolog_orthology_type
## 2919 bmutus_homolog_perc_id
## 2920 bmutus_homolog_perc_id_r1
## 2921 bmutus_homolog_goc_score
## 2922 bmutus_homolog_wga_coverage
## 2923 bmutus_homolog_orthology_confidence
## 2924 chyarkandensis_homolog_ensembl_gene
## 2925 chyarkandensis_homolog_associated_gene_name
## 2926 chyarkandensis_homolog_ensembl_peptide
## 2927 chyarkandensis_homolog_chromosome
## 2928 chyarkandensis_homolog_chrom_start
## 2929 chyarkandensis_homolog_chrom_end
## 2930 chyarkandensis_homolog_canonical_transcript_protein
## 2931 chyarkandensis_homolog_subtype
## 2932 chyarkandensis_homolog_orthology_type
## 2933 chyarkandensis_homolog_perc_id
## 2934 chyarkandensis_homolog_perc_id_r1
## 2935 chyarkandensis_homolog_goc_score
## 2936 chyarkandensis_homolog_wga_coverage
## 2937 chyarkandensis_homolog_orthology_confidence
## 2938 sldorsalis_homolog_ensembl_gene
## 2939 sldorsalis_homolog_associated_gene_name
## 2940 sldorsalis_homolog_ensembl_peptide
## 2941 sldorsalis_homolog_chromosome
## 2942 sldorsalis_homolog_chrom_start
## 2943 sldorsalis_homolog_chrom_end
## 2944 sldorsalis_homolog_canonical_transcript_protein
## 2945 sldorsalis_homolog_subtype
## 2946 sldorsalis_homolog_orthology_type
## 2947 sldorsalis_homolog_perc_id
## 2948 sldorsalis_homolog_perc_id_r1
## 2949 sldorsalis_homolog_goc_score
## 2950 sldorsalis_homolog_wga_coverage
## 2951 sldorsalis_homolog_orthology_confidence
## 2952 tguttata_homolog_ensembl_gene
## 2953 tguttata_homolog_associated_gene_name
## 2954 tguttata_homolog_ensembl_peptide
## 2955 tguttata_homolog_chromosome
## 2956 tguttata_homolog_chrom_start
## 2957 tguttata_homolog_chrom_end
## 2958 tguttata_homolog_canonical_transcript_protein
## 2959 tguttata_homolog_subtype
## 2960 tguttata_homolog_orthology_type
## 2961 tguttata_homolog_perc_id
## 2962 tguttata_homolog_perc_id_r1
## 2963 tguttata_homolog_goc_score
## 2964 tguttata_homolog_wga_coverage
## 2965 tguttata_homolog_orthology_confidence
## 2966 mzebra_homolog_ensembl_gene
## 2967 mzebra_homolog_associated_gene_name
## 2968 mzebra_homolog_ensembl_peptide
## 2969 mzebra_homolog_chromosome
## 2970 mzebra_homolog_chrom_start
## 2971 mzebra_homolog_chrom_end
## 2972 mzebra_homolog_canonical_transcript_protein
## 2973 mzebra_homolog_subtype
## 2974 mzebra_homolog_orthology_type
## 2975 mzebra_homolog_perc_id
## 2976 mzebra_homolog_perc_id_r1
## 2977 mzebra_homolog_goc_score
## 2978 mzebra_homolog_wga_coverage
## 2979 mzebra_homolog_orthology_confidence
## 2980 drerio_homolog_ensembl_gene
## 2981 drerio_homolog_associated_gene_name
## 2982 drerio_homolog_ensembl_peptide
## 2983 drerio_homolog_chromosome
## 2984 drerio_homolog_chrom_start
## 2985 drerio_homolog_chrom_end
## 2986 drerio_homolog_canonical_transcript_protein
## 2987 drerio_homolog_subtype
## 2988 drerio_homolog_orthology_type
## 2989 drerio_homolog_perc_id
## 2990 drerio_homolog_perc_id_r1
## 2991 drerio_homolog_goc_score
## 2992 drerio_homolog_wga_coverage
## 2993 drerio_homolog_orthology_confidence
## 2994 marmatus_homolog_ensembl_gene
## 2995 marmatus_homolog_associated_gene_name
## 2996 marmatus_homolog_ensembl_peptide
## 2997 marmatus_homolog_chromosome
## 2998 marmatus_homolog_chrom_start
## 2999 marmatus_homolog_chrom_end
## 3000 marmatus_homolog_canonical_transcript_protein
## 3001 marmatus_homolog_subtype
## 3002 marmatus_homolog_orthology_type
## 3003 marmatus_homolog_perc_id
## 3004 marmatus_homolog_perc_id_r1
## 3005 marmatus_homolog_goc_score
## 3006 marmatus_homolog_orthology_confidence
## 3007 hsapiens_paralog_ensembl_gene
## 3008 hsapiens_paralog_associated_gene_name
## 3009 hsapiens_paralog_ensembl_peptide
## 3010 hsapiens_paralog_chromosome
## 3011 hsapiens_paralog_chrom_start
## 3012 hsapiens_paralog_chrom_end
## 3013 hsapiens_paralog_canonical_transcript_protein
## 3014 hsapiens_paralog_subtype
## 3015 hsapiens_paralog_orthology_type
## 3016 hsapiens_paralog_perc_id
## 3017 hsapiens_paralog_perc_id_r1
## 3018 ensembl_gene_id
## 3019 ensembl_gene_id_version
## 3020 version
## 3021 ensembl_transcript_id
## 3022 ensembl_transcript_id_version
## 3023 transcript_version
## 3024 ensembl_peptide_id
## 3025 ensembl_peptide_id_version
## 3026 peptide_version
## 3027 chromosome_name
## 3028 start_position
## 3029 end_position
## 3030 strand
## 3031 band
## 3032 external_gene_name
## 3033 external_gene_source
## 3034 transcript_count
## 3035 percentage_gene_gc_content
## 3036 description
## 3037 variation_name
## 3038 germ_line_variation_source
## 3039 source_description
## 3040 allele
## 3041 validated
## 3042 mapweight
## 3043 minor_allele
## 3044 minor_allele_freq
## 3045 minor_allele_count
## 3046 clinical_significance
## 3047 transcript_location
## 3048 snp_chromosome_strand
## 3049 peptide_location
## 3050 chromosome_start
## 3051 chromosome_end
## 3052 polyphen_prediction_2076
## 3053 polyphen_score_2076
## 3054 sift_prediction_2076
## 3055 sift_score_2076
## 3056 distance_to_transcript_2076
## 3057 cds_start_2076
## 3058 cds_end_2076
## 3059 peptide_shift
## 3060 synonymous_status
## 3061 allele_string_2076
## 3062 ensembl_gene_id
## 3063 ensembl_gene_id_version
## 3064 version
## 3065 ensembl_transcript_id
## 3066 ensembl_transcript_id_version
## 3067 transcript_version
## 3068 ensembl_peptide_id
## 3069 ensembl_peptide_id_version
## 3070 peptide_version
## 3071 chromosome_name
## 3072 start_position
## 3073 end_position
## 3074 strand
## 3075 band
## 3076 external_gene_name
## 3077 external_gene_source
## 3078 transcript_count
## 3079 percentage_gene_gc_content
## 3080 description
## 3081 somatic_variation_name
## 3082 somatic_source_name
## 3083 somatic_source_description
## 3084 somatic_allele
## 3085 somatic_validated
## 3086 somatic_mapweight
## 3087 somatic_transcript_location
## 3088 somatic_snp_chromosome_strand
## 3089 somatic_peptide_location
## 3090 somatic_chromosome_start
## 3091 somatic_chromosome_end
## 3092 mart_transcript_variation_som__dm_distance_to_transcript_2076
## 3093 somatic_cds_start_2076
## 3094 somatic_cds_end_2076
## 3095 somatic_synonymous_status
## 3096 mart_transcript_variation_som__dm_allele_string_2076
## 3097 transcript_exon_intron
## 3098 gene_exon_intron
## 3099 transcript_flank
## 3100 gene_flank
## 3101 coding_transcript_flank
## 3102 coding_gene_flank
## 3103 5utr
## 3104 3utr
## 3105 gene_exon
## 3106 cdna
## 3107 coding
## 3108 peptide
## 3109 upstream_flank
## 3110 downstream_flank
## 3111 ensembl_gene_id
## 3112 ensembl_gene_id_version
## 3113 description
## 3114 external_gene_name
## 3115 external_gene_source
## 3116 chromosome_name
## 3117 start_position
## 3118 end_position
## 3119 gene_biotype
## 3120 version
## 3121 uniparc
## 3122 uniprotswissprot
## 3123 uniprotsptrembl
## 3124 cdna_coding_start
## 3125 cdna_coding_end
## 3126 5_utr_start
## 3127 5_utr_end
## 3128 3_utr_start
## 3129 3_utr_end
## 3130 ensembl_transcript_id
## 3131 ensembl_transcript_id_version
## 3132 ensembl_peptide_id
## 3133 ensembl_peptide_id_version
## 3134 transcript_biotype
## 3135 transcript_version
## 3136 peptide_version
## 3137 strand
## 3138 transcript_start
## 3139 transcript_end
## 3140 transcription_start_site
## 3141 transcript_length
## 3142 cds_length
## 3143 cds_start
## 3144 cds_end
## 3145 ensembl_exon_id
## 3146 exon_chrom_start
## 3147 exon_chrom_end
## 3148 strand
## 3149 rank
## 3150 phase
## 3151 end_phase
## 3152 cdna_coding_start
## 3153 cdna_coding_end
## 3154 genomic_coding_start
## 3155 genomic_coding_end
## 3156 is_constitutive
## description
## 1 Gene stable ID
## 2 Gene stable ID version
## 3 Transcript stable ID
## 4 Transcript stable ID version
## 5 Protein stable ID
## 6 Protein stable ID version
## 7 Exon stable ID
## 8 Gene description
## 9 Chromosome/scaffold name
## 10 Gene start (bp)
## 11 Gene end (bp)
## 12 Strand
## 13 Karyotype band
## 14 Transcript start (bp)
## 15 Transcript end (bp)
## 16 Transcription start site (TSS)
## 17 Transcript length (including UTRs and CDS)
## 18 Transcript support level (TSL)
## 19 GENCODE basic annotation
## 20 APPRIS annotation
## 21 Ensembl Canonical
## 22 RefSeq match transcript (MANE Select)
## 23 RefSeq match transcript (MANE Plus Clinical)
## 24 Gene name
## 25 Source of gene name
## 26 Transcript name
## 27 Source of transcript name
## 28 Transcript count
## 29 Gene % GC content
## 30 Gene type
## 31 Transcript type
## 32 Source (gene)
## 33 Source (transcript)
## 34 Version (gene)
## 35 Version (transcript)
## 36 Version (protein)
## 37 Gene Synonym
## 38 Phenotype description
## 39 Source name
## 40 Study external reference
## 41 Strain name
## 42 Strain gender
## 43 P value
## 44 GO term accession
## 45 GO term name
## 46 GO term definition
## 47 GO term evidence code
## 48 GO domain
## 49 GOSlim GOA Accession(s)
## 50 GOSlim GOA Description
## 51 BioGRID Interaction data, The General Repository for Interaction Datasets ID
## 52 CCDS ID
## 53 ChEMBL ID
## 54 DataBase of Aberrant 3' Splice Sites name
## 55 DataBase of Aberrant 3' Splice Sites ID
## 56 DataBase of Aberrant 5' Splice Sites name
## 57 DataBase of Aberrant 5' Splice Sites ID
## 58 EntrezGene transcript name ID
## 59 European Nucleotide Archive ID
## 60 Expression Atlas ID
## 61 GeneCards ID
## 62 HGNC ID
## 63 HGNC symbol
## 64 Human Protein Atlas accession
## 65 Human Protein Atlas ID
## 66 INSDC protein ID
## 67 LRG display in Ensembl gene ID
## 68 LRG display in Ensembl transcript ID
## 69 MEROPS - the Peptidase Database ID
## 70 MIM gene description
## 71 MIM gene accession
## 72 MIM morbid description
## 73 MIM morbid accession
## 74 miRBase accession
## 75 miRBase ID
## 76 miRBase transcript name ID
## 77 NCBI gene (formerly Entrezgene) description
## 78 NCBI gene (formerly Entrezgene) accession
## 79 NCBI gene (formerly Entrezgene) ID
## 80 PDB ID
## 81 Reactome ID
## 82 Reactome gene ID
## 83 Reactome transcript ID
## 84 RefSeq mRNA ID
## 85 RefSeq mRNA predicted ID
## 86 RefSeq ncRNA ID
## 87 RefSeq ncRNA predicted ID
## 88 RefSeq peptide ID
## 89 RefSeq peptide predicted ID
## 90 RFAM ID
## 91 RFAM transcript name ID
## 92 RNAcentral ID
## 93 Transcript name ID
## 94 UCSC Stable ID
## 95 UniParc ID
## 96 UniProtKB Gene Name symbol
## 97 UniProtKB Gene Name ID
## 98 UniProtKB isoform ID
## 99 UniProtKB/Swiss-Prot ID
## 100 UniProtKB/TrEMBL ID
## 101 WikiGene description
## 102 WikiGene name
## 103 WikiGene ID
## 104 AFFY HC G110 probe
## 105 AFFY HG Focus probe
## 106 AFFY HG U133A 2 probe
## 107 AFFY HG U133B probe
## 108 AFFY HG U133 Plus 2 probe
## 109 AFFY HG U95A probe
## 110 AFFY HG U95Av2 probe
## 111 AFFY HG U95B probe
## 112 AFFY HG U95C probe
## 113 AFFY HG U95D probe
## 114 AFFY HG U95E probe
## 115 AFFY HTA 2 0 probe
## 116 AFFY HT HG U133 Plus PM probe
## 117 AFFY HuEx 1 0 st v2 probe
## 118 AFFY HuGeneFL probe
## 119 AFFY HuGene 1 0 st v1 probe
## 120 AFFY HuGene 2 0 st v1 probe
## 121 AFFY HuGene 2 1 st v1 probe
## 122 AFFY PrimeView probe
## 123 AFFY U133 X3P probe
## 124 AGILENT CGH 44b probe
## 125 AGILENT GPL19072 probe
## 126 AGILENT GPL26966 probe
## 127 AGILENT GPL6848 probe
## 128 AGILENT SurePrint G3 GE 8x60k probe
## 129 AGILENT SurePrint G3 GE 8x60k v2 probe
## 130 AGILENT WholeGenome probe
## 131 AGILENT WholeGenome 4x44k v1 probe
## 132 AGILENT WholeGenome 4x44k v2 probe
## 133 CODELINK CODELINK probe
## 134 ILLUMINA HumanRef 8 V3 probe
## 135 ILLUMINA HumanWG 6 V3 probe
## 136 PHALANX OneArray probe
## 137 CDD ID
## 138 CDD start
## 139 CDD end
## 140 Gene3D ID
## 141 Gene3D start
## 142 Gene3D end
## 143 HAMAP ID
## 144 HAMAP start
## 145 HAMAP end
## 146 PANTHER ID
## 147 PANTHER start
## 148 PANTHER end
## 149 Pfam ID
## 150 Pfam start
## 151 Pfam end
## 152 PIRSF ID
## 153 PIRSF start
## 154 PIRSF end
## 155 Prints ID
## 156 Prints start
## 157 Prints end
## 158 PROSITE patterns ID
## 159 PROSITE patterns start
## 160 PROSITE patterns end
## 161 PROSITE profiles ID
## 162 PROSITE profiles start
## 163 PROSITE profiles end
## 164 SFLD ID
## 165 SFLD start
## 166 SFLD end
## 167 SMART ID
## 168 SMART start
## 169 SMART end
## 170 Superfamily ID
## 171 Superfamily start
## 172 Superfamily end
## 173 TIGRFAM ID
## 174 TIGRFAM start
## 175 TIGRFAM end
## 176 Interpro ID
## 177 Interpro Short Description
## 178 Interpro Description
## 179 Interpro start
## 180 Interpro end
## 181 AFDB-ENSP mappings
## 182 AFDB-ENSP mappings start
## 183 AFDB-ENSP mappings end
## 184 MobiDB lite
## 185 MobiDB lite start
## 186 MobiDB lite end
## 187 Coiled-coils (Ncoils)
## 188 Coiled-coils (Ncoils) start
## 189 Coiled-coils (Ncoils) end
## 190 Low complexity (Seg)
## 191 Low complexity (Seg) start
## 192 Low complexity (Seg) end
## 193 PDB-ENSP mappings
## 194 PDB-ENSP mappings start
## 195 PDB-ENSP mappings end
## 196 Cleavage site (Signalp)
## 197 Cleavage site (Signalp) start
## 198 Cleavage site (Signalp) end
## 199 Transmembrane helices
## 200 Transmembrane helices start
## 201 Transmembrane helices end
## 202 Gene stable ID
## 203 Gene stable ID version
## 204 Version (gene)
## 205 Transcript stable ID
## 206 Transcript stable ID version
## 207 Version (transcript)
## 208 Protein stable ID
## 209 Protein stable ID version
## 210 Version (protein)
## 211 Chromosome/scaffold name
## 212 Gene start (bp)
## 213 Gene end (bp)
## 214 Transcript start (bp)
## 215 Transcript end (bp)
## 216 Transcription start site (TSS)
## 217 Transcript length (including UTRs and CDS)
## 218 Strand
## 219 Gene name
## 220 Source of gene name
## 221 5' UTR start
## 222 5' UTR end
## 223 3' UTR start
## 224 3' UTR end
## 225 CDS Length
## 226 Transcript count
## 227 Gene description
## 228 Gene type
## 229 Exon region start (bp)
## 230 Exon region end (bp)
## 231 Constitutive exon
## 232 Exon rank in transcript
## 233 Start phase
## 234 End phase
## 235 cDNA coding start
## 236 cDNA coding end
## 237 Genomic coding start
## 238 Genomic coding end
## 239 Exon stable ID
## 240 CDS start
## 241 CDS end
## 242 Gene stable ID
## 243 Gene stable ID version
## 244 Version (gene)
## 245 Transcript stable ID
## 246 Transcript stable ID version
## 247 Version (transcript)
## 248 Protein stable ID
## 249 Protein stable ID version
## 250 Version (protein)
## 251 Chromosome/scaffold name
## 252 Gene start (bp)
## 253 Gene end (bp)
## 254 Strand
## 255 Karyotype band
## 256 Gene name
## 257 Source of gene name
## 258 Transcript count
## 259 Gene % GC content
## 260 Gene description
## 261 Abingdon island giant tortoise gene stable ID
## 262 Abingdon island giant tortoise gene name
## 263 Abingdon island giant tortoise protein or transcript stable ID
## 264 Abingdon island giant tortoise chromosome/scaffold name
## 265 Abingdon island giant tortoise chromosome/scaffold start (bp)
## 266 Abingdon island giant tortoise chromosome/scaffold end (bp)
## 267 Query protein or transcript ID
## 268 Last common ancestor with Abingdon island giant tortoise
## 269 Abingdon island giant tortoise homology type
## 270 %id. target Abingdon island giant tortoise gene identical to query gene
## 271 %id. query gene identical to target Abingdon island giant tortoise gene
## 272 Abingdon island giant tortoise Gene-order conservation score
## 273 Abingdon island giant tortoise Whole-genome alignment coverage
## 274 Abingdon island giant tortoise orthology confidence [0 low, 1 high]
## 275 African ostrich gene stable ID
## 276 African ostrich gene name
## 277 African ostrich protein or transcript stable ID
## 278 African ostrich chromosome/scaffold name
## 279 African ostrich chromosome/scaffold start (bp)
## 280 African ostrich chromosome/scaffold end (bp)
## 281 Query protein or transcript ID
## 282 Last common ancestor with African ostrich
## 283 African ostrich homology type
## 284 %id. target African ostrich gene identical to query gene
## 285 %id. query gene identical to target African ostrich gene
## 286 African ostrich Gene-order conservation score
## 287 African ostrich Whole-genome alignment coverage
## 288 African ostrich orthology confidence [0 low, 1 high]
## 289 Algerian mouse gene stable ID
## 290 Algerian mouse gene name
## 291 Algerian mouse protein or transcript stable ID
## 292 Algerian mouse chromosome/scaffold name
## 293 Algerian mouse chromosome/scaffold start (bp)
## 294 Algerian mouse chromosome/scaffold end (bp)
## 295 Query protein or transcript ID
## 296 Last common ancestor with Algerian mouse
## 297 Algerian mouse homology type
## 298 %id. target Algerian mouse gene identical to query gene
## 299 %id. query gene identical to target Algerian mouse gene
## 300 Algerian mouse Gene-order conservation score
## 301 Algerian mouse Whole-genome alignment coverage
## 302 Algerian mouse orthology confidence [0 low, 1 high]
## 303 Alpaca gene stable ID
## 304 Alpaca gene name
## 305 Alpaca protein or transcript stable ID
## 306 Alpaca chromosome/scaffold name
## 307 Alpaca chromosome/scaffold start (bp)
## 308 Alpaca chromosome/scaffold end (bp)
## 309 Query protein or transcript ID
## 310 Last common ancestor with Alpaca
## 311 Alpaca homology type
## 312 %id. target Alpaca gene identical to query gene
## 313 %id. query gene identical to target Alpaca gene
## 314 Alpaca Gene-order conservation score
## 315 Alpaca Whole-genome alignment coverage
## 316 Alpaca orthology confidence [0 low, 1 high]
## 317 Alpine marmot gene stable ID
## 318 Alpine marmot gene name
## 319 Alpine marmot protein or transcript stable ID
## 320 Alpine marmot chromosome/scaffold name
## 321 Alpine marmot chromosome/scaffold start (bp)
## 322 Alpine marmot chromosome/scaffold end (bp)
## 323 Query protein or transcript ID
## 324 Last common ancestor with Alpine marmot
## 325 Alpine marmot homology type
## 326 %id. target Alpine marmot gene identical to query gene
## 327 %id. query gene identical to target Alpine marmot gene
## 328 Alpine marmot Gene-order conservation score
## 329 Alpine marmot Whole-genome alignment coverage
## 330 Alpine marmot orthology confidence [0 low, 1 high]
## 331 Amazon molly gene stable ID
## 332 Amazon molly gene name
## 333 Amazon molly protein or transcript stable ID
## 334 Amazon molly chromosome/scaffold name
## 335 Amazon molly chromosome/scaffold start (bp)
## 336 Amazon molly chromosome/scaffold end (bp)
## 337 Query protein or transcript ID
## 338 Last common ancestor with Amazon molly
## 339 Amazon molly homology type
## 340 %id. target Amazon molly gene identical to query gene
## 341 %id. query gene identical to target Amazon molly gene
## 342 Amazon molly Gene-order conservation score
## 343 Amazon molly Whole-genome alignment coverage
## 344 Amazon molly orthology confidence [0 low, 1 high]
## 345 American bison gene stable ID
## 346 American bison gene name
## 347 American bison protein or transcript stable ID
## 348 American bison chromosome/scaffold name
## 349 American bison chromosome/scaffold start (bp)
## 350 American bison chromosome/scaffold end (bp)
## 351 Query protein or transcript ID
## 352 Last common ancestor with American bison
## 353 American bison homology type
## 354 %id. target American bison gene identical to query gene
## 355 %id. query gene identical to target American bison gene
## 356 American bison Gene-order conservation score
## 357 American bison Whole-genome alignment coverage
## 358 American bison orthology confidence [0 low, 1 high]
## 359 American black bear gene stable ID
## 360 American black bear gene name
## 361 American black bear protein or transcript stable ID
## 362 American black bear chromosome/scaffold name
## 363 American black bear chromosome/scaffold start (bp)
## 364 American black bear chromosome/scaffold end (bp)
## 365 Query protein or transcript ID
## 366 Last common ancestor with American black bear
## 367 American black bear homology type
## 368 %id. target American black bear gene identical to query gene
## 369 %id. query gene identical to target American black bear gene
## 370 American black bear Gene-order conservation score
## 371 American black bear Whole-genome alignment coverage
## 372 American black bear orthology confidence [0 low, 1 high]
## 373 American mink gene stable ID
## 374 American mink gene name
## 375 American mink protein or transcript stable ID
## 376 American mink chromosome/scaffold name
## 377 American mink chromosome/scaffold start (bp)
## 378 American mink chromosome/scaffold end (bp)
## 379 Query protein or transcript ID
## 380 Last common ancestor with American mink
## 381 American mink homology type
## 382 %id. target American mink gene identical to query gene
## 383 %id. query gene identical to target American mink gene
## 384 American mink Gene-order conservation score
## 385 American mink Whole-genome alignment coverage
## 386 American mink orthology confidence [0 low, 1 high]
## 387 Arabian camel gene stable ID
## 388 Arabian camel gene name
## 389 Arabian camel protein or transcript stable ID
## 390 Arabian camel chromosome/scaffold name
## 391 Arabian camel chromosome/scaffold start (bp)
## 392 Arabian camel chromosome/scaffold end (bp)
## 393 Query protein or transcript ID
## 394 Last common ancestor with Arabian camel
## 395 Arabian camel homology type
## 396 %id. target Arabian camel gene identical to query gene
## 397 %id. query gene identical to target Arabian camel gene
## 398 Arabian camel Gene-order conservation score
## 399 Arabian camel Whole-genome alignment coverage
## 400 Arabian camel orthology confidence [0 low, 1 high]
## 401 Arctic ground squirrel gene stable ID
## 402 Arctic ground squirrel gene name
## 403 Arctic ground squirrel protein or transcript stable ID
## 404 Arctic ground squirrel chromosome/scaffold name
## 405 Arctic ground squirrel chromosome/scaffold start (bp)
## 406 Arctic ground squirrel chromosome/scaffold end (bp)
## 407 Query protein or transcript ID
## 408 Last common ancestor with Arctic ground squirrel
## 409 Arctic ground squirrel homology type
## 410 %id. target Arctic ground squirrel gene identical to query gene
## 411 %id. query gene identical to target Arctic ground squirrel gene
## 412 Arctic ground squirrel Gene-order conservation score
## 413 Arctic ground squirrel Whole-genome alignment coverage
## 414 Arctic ground squirrel orthology confidence [0 low, 1 high]
## 415 Argentine black and white tegu gene stable ID
## 416 Argentine black and white tegu gene name
## 417 Argentine black and white tegu protein or transcript stable ID
## 418 Argentine black and white tegu chromosome/scaffold name
## 419 Argentine black and white tegu chromosome/scaffold start (bp)
## 420 Argentine black and white tegu chromosome/scaffold end (bp)
## 421 Query protein or transcript ID
## 422 Last common ancestor with Argentine black and white tegu
## 423 Argentine black and white tegu homology type
## 424 %id. target Argentine black and white tegu gene identical to query gene
## 425 %id. query gene identical to target Argentine black and white tegu gene
## 426 Argentine black and white tegu Gene-order conservation score
## 427 Argentine black and white tegu Whole-genome alignment coverage
## 428 Argentine black and white tegu orthology confidence [0 low, 1 high]
## 429 Armadillo gene stable ID
## 430 Armadillo gene name
## 431 Armadillo protein or transcript stable ID
## 432 Armadillo chromosome/scaffold name
## 433 Armadillo chromosome/scaffold start (bp)
## 434 Armadillo chromosome/scaffold end (bp)
## 435 Query protein or transcript ID
## 436 Last common ancestor with Armadillo
## 437 Armadillo homology type
## 438 %id. target Armadillo gene identical to query gene
## 439 %id. query gene identical to target Armadillo gene
## 440 Armadillo Gene-order conservation score
## 441 Armadillo Whole-genome alignment coverage
## 442 Armadillo orthology confidence [0 low, 1 high]
## 443 Asian bonytongue gene stable ID
## 444 Asian bonytongue gene name
## 445 Asian bonytongue protein or transcript stable ID
## 446 Asian bonytongue chromosome/scaffold name
## 447 Asian bonytongue chromosome/scaffold start (bp)
## 448 Asian bonytongue chromosome/scaffold end (bp)
## 449 Query protein or transcript ID
## 450 Last common ancestor with Asian bonytongue
## 451 Asian bonytongue homology type
## 452 %id. target Asian bonytongue gene identical to query gene
## 453 %id. query gene identical to target Asian bonytongue gene
## 454 Asian bonytongue Gene-order conservation score
## 455 Asian bonytongue Whole-genome alignment coverage
## 456 Asian bonytongue orthology confidence [0 low, 1 high]
## 457 Atlantic cod gene stable ID
## 458 Atlantic cod gene name
## 459 Atlantic cod protein or transcript stable ID
## 460 Atlantic cod chromosome/scaffold name
## 461 Atlantic cod chromosome/scaffold start (bp)
## 462 Atlantic cod chromosome/scaffold end (bp)
## 463 Query protein or transcript ID
## 464 Last common ancestor with Atlantic cod
## 465 Atlantic cod homology type
## 466 %id. target Atlantic cod gene identical to query gene
## 467 %id. query gene identical to target Atlantic cod gene
## 468 Atlantic cod Gene-order conservation score
## 469 Atlantic cod orthology confidence [0 low, 1 high]
## 470 Atlantic herring gene stable ID
## 471 Atlantic herring gene name
## 472 Atlantic herring protein or transcript stable ID
## 473 Atlantic herring chromosome/scaffold name
## 474 Atlantic herring chromosome/scaffold start (bp)
## 475 Atlantic herring chromosome/scaffold end (bp)
## 476 Query protein or transcript ID
## 477 Last common ancestor with Atlantic herring
## 478 Atlantic herring homology type
## 479 %id. target Atlantic herring gene identical to query gene
## 480 %id. query gene identical to target Atlantic herring gene
## 481 Atlantic herring Gene-order conservation score
## 482 Atlantic herring Whole-genome alignment coverage
## 483 Atlantic herring orthology confidence [0 low, 1 high]
## 484 Atlantic salmon gene stable ID
## 485 Atlantic salmon gene name
## 486 Atlantic salmon protein or transcript stable ID
## 487 Atlantic salmon chromosome/scaffold name
## 488 Atlantic salmon chromosome/scaffold start (bp)
## 489 Atlantic salmon chromosome/scaffold end (bp)
## 490 Query protein or transcript ID
## 491 Last common ancestor with Atlantic salmon
## 492 Atlantic salmon homology type
## 493 %id. target Atlantic salmon gene identical to query gene
## 494 %id. query gene identical to target Atlantic salmon gene
## 495 Atlantic salmon Gene-order conservation score
## 496 Atlantic salmon orthology confidence [0 low, 1 high]
## 497 Australian saltwater crocodile gene stable ID
## 498 Australian saltwater crocodile gene name
## 499 Australian saltwater crocodile protein or transcript stable ID
## 500 Australian saltwater crocodile chromosome/scaffold name
## 501 Australian saltwater crocodile chromosome/scaffold start (bp)
## 502 Australian saltwater crocodile chromosome/scaffold end (bp)
## 503 Query protein or transcript ID
## 504 Last common ancestor with Australian saltwater crocodile
## 505 Australian saltwater crocodile homology type
## 506 %id. target Australian saltwater crocodile gene identical to query gene
## 507 %id. query gene identical to target Australian saltwater crocodile gene
## 508 Australian saltwater crocodile Gene-order conservation score
## 509 Australian saltwater crocodile Whole-genome alignment coverage
## 510 Australian saltwater crocodile orthology confidence [0 low, 1 high]
## 511 Ballan wrasse gene stable ID
## 512 Ballan wrasse gene name
## 513 Ballan wrasse protein or transcript stable ID
## 514 Ballan wrasse chromosome/scaffold name
## 515 Ballan wrasse chromosome/scaffold start (bp)
## 516 Ballan wrasse chromosome/scaffold end (bp)
## 517 Query protein or transcript ID
## 518 Last common ancestor with Ballan wrasse
## 519 Ballan wrasse homology type
## 520 %id. target Ballan wrasse gene identical to query gene
## 521 %id. query gene identical to target Ballan wrasse gene
## 522 Ballan wrasse Gene-order conservation score
## 523 Ballan wrasse Whole-genome alignment coverage
## 524 Ballan wrasse orthology confidence [0 low, 1 high]
## 525 Barramundi perch gene stable ID
## 526 Barramundi perch gene name
## 527 Barramundi perch protein or transcript stable ID
## 528 Barramundi perch chromosome/scaffold name
## 529 Barramundi perch chromosome/scaffold start (bp)
## 530 Barramundi perch chromosome/scaffold end (bp)
## 531 Query protein or transcript ID
## 532 Last common ancestor with Barramundi perch
## 533 Barramundi perch homology type
## 534 %id. target Barramundi perch gene identical to query gene
## 535 %id. query gene identical to target Barramundi perch gene
## 536 Barramundi perch Gene-order conservation score
## 537 Barramundi perch Whole-genome alignment coverage
## 538 Barramundi perch orthology confidence [0 low, 1 high]
## 539 Beluga whale gene stable ID
## 540 Beluga whale gene name
## 541 Beluga whale protein or transcript stable ID
## 542 Beluga whale chromosome/scaffold name
## 543 Beluga whale chromosome/scaffold start (bp)
## 544 Beluga whale chromosome/scaffold end (bp)
## 545 Query protein or transcript ID
## 546 Last common ancestor with Beluga whale
## 547 Beluga whale homology type
## 548 %id. target Beluga whale gene identical to query gene
## 549 %id. query gene identical to target Beluga whale gene
## 550 Beluga whale Gene-order conservation score
## 551 Beluga whale Whole-genome alignment coverage
## 552 Beluga whale orthology confidence [0 low, 1 high]
## 553 Bicolor damselfish gene stable ID
## 554 Bicolor damselfish gene name
## 555 Bicolor damselfish protein or transcript stable ID
## 556 Bicolor damselfish chromosome/scaffold name
## 557 Bicolor damselfish chromosome/scaffold start (bp)
## 558 Bicolor damselfish chromosome/scaffold end (bp)
## 559 Query protein or transcript ID
## 560 Last common ancestor with Bicolor damselfish
## 561 Bicolor damselfish homology type
## 562 %id. target Bicolor damselfish gene identical to query gene
## 563 %id. query gene identical to target Bicolor damselfish gene
## 564 Bicolor damselfish Gene-order conservation score
## 565 Bicolor damselfish Whole-genome alignment coverage
## 566 Bicolor damselfish orthology confidence [0 low, 1 high]
## 567 Black snub-nosed monkey gene stable ID
## 568 Black snub-nosed monkey gene name
## 569 Black snub-nosed monkey protein or transcript stable ID
## 570 Black snub-nosed monkey chromosome/scaffold name
## 571 Black snub-nosed monkey chromosome/scaffold start (bp)
## 572 Black snub-nosed monkey chromosome/scaffold end (bp)
## 573 Query protein or transcript ID
## 574 Last common ancestor with Black snub-nosed monkey
## 575 Black snub-nosed monkey homology type
## 576 %id. target Black snub-nosed monkey gene identical to query gene
## 577 %id. query gene identical to target Black snub-nosed monkey gene
## 578 Black snub-nosed monkey Gene-order conservation score
## 579 Black snub-nosed monkey Whole-genome alignment coverage
## 580 Black snub-nosed monkey orthology confidence [0 low, 1 high]
## 581 Blue whale gene stable ID
## 582 Blue whale gene name
## 583 Blue whale protein or transcript stable ID
## 584 Blue whale chromosome/scaffold name
## 585 Blue whale chromosome/scaffold start (bp)
## 586 Blue whale chromosome/scaffold end (bp)
## 587 Query protein or transcript ID
## 588 Last common ancestor with Blue whale
## 589 Blue whale homology type
## 590 %id. target Blue whale gene identical to query gene
## 591 %id. query gene identical to target Blue whale gene
## 592 Blue whale Gene-order conservation score
## 593 Blue whale Whole-genome alignment coverage
## 594 Blue whale orthology confidence [0 low, 1 high]
## 595 Blue-ringed sea krait gene stable ID
## 596 Blue-ringed sea krait gene name
## 597 Blue-ringed sea krait protein or transcript stable ID
## 598 Blue-ringed sea krait chromosome/scaffold name
## 599 Blue-ringed sea krait chromosome/scaffold start (bp)
## 600 Blue-ringed sea krait chromosome/scaffold end (bp)
## 601 Query protein or transcript ID
## 602 Last common ancestor with Blue-ringed sea krait
## 603 Blue-ringed sea krait homology type
## 604 %id. target Blue-ringed sea krait gene identical to query gene
## 605 %id. query gene identical to target Blue-ringed sea krait gene
## 606 Blue-ringed sea krait Gene-order conservation score
## 607 Blue-ringed sea krait Whole-genome alignment coverage
## 608 Blue-ringed sea krait orthology confidence [0 low, 1 high]
## 609 Bolivian squirrel monkey gene stable ID
## 610 Bolivian squirrel monkey gene name
## 611 Bolivian squirrel monkey protein or transcript stable ID
## 612 Bolivian squirrel monkey chromosome/scaffold name
## 613 Bolivian squirrel monkey chromosome/scaffold start (bp)
## 614 Bolivian squirrel monkey chromosome/scaffold end (bp)
## 615 Query protein or transcript ID
## 616 Last common ancestor with Bolivian squirrel monkey
## 617 Bolivian squirrel monkey homology type
## 618 %id. target Bolivian squirrel monkey gene identical to query gene
## 619 %id. query gene identical to target Bolivian squirrel monkey gene
## 620 Bolivian squirrel monkey Gene-order conservation score
## 621 Bolivian squirrel monkey Whole-genome alignment coverage
## 622 Bolivian squirrel monkey orthology confidence [0 low, 1 high]
## 623 Bonobo gene stable ID
## 624 Bonobo gene name
## 625 Bonobo protein or transcript stable ID
## 626 Bonobo chromosome/scaffold name
## 627 Bonobo chromosome/scaffold start (bp)
## 628 Bonobo chromosome/scaffold end (bp)
## 629 Query protein or transcript ID
## 630 Last common ancestor with Bonobo
## 631 Bonobo homology type
## 632 %id. target Bonobo gene identical to query gene
## 633 %id. query gene identical to target Bonobo gene
## 634 Bonobo Gene-order conservation score
## 635 Bonobo Whole-genome alignment coverage
## 636 Bonobo orthology confidence [0 low, 1 high]
## 637 Brown trout gene stable ID
## 638 Brown trout gene name
## 639 Brown trout protein or transcript stable ID
## 640 Brown trout chromosome/scaffold name
## 641 Brown trout chromosome/scaffold start (bp)
## 642 Brown trout chromosome/scaffold end (bp)
## 643 Query protein or transcript ID
## 644 Last common ancestor with Brown trout
## 645 Brown trout homology type
## 646 %id. target Brown trout gene identical to query gene
## 647 %id. query gene identical to target Brown trout gene
## 648 Brown trout Gene-order conservation score
## 649 Brown trout Whole-genome alignment coverage
## 650 Brown trout orthology confidence [0 low, 1 high]
## 651 Burton's mouthbrooder gene stable ID
## 652 Burton's mouthbrooder gene name
## 653 Burton's mouthbrooder protein or transcript stable ID
## 654 Burton's mouthbrooder chromosome/scaffold name
## 655 Burton's mouthbrooder chromosome/scaffold start (bp)
## 656 Burton's mouthbrooder chromosome/scaffold end (bp)
## 657 Query protein or transcript ID
## 658 Last common ancestor with Burton's mouthbrooder
## 659 Burton's mouthbrooder homology type
## 660 %id. target Burton's mouthbrooder gene identical to query gene
## 661 %id. query gene identical to target Burton's mouthbrooder gene
## 662 Burton's mouthbrooder Gene-order conservation score
## 663 Burton's mouthbrooder Whole-genome alignment coverage
## 664 Burton's mouthbrooder orthology confidence [0 low, 1 high]
## 665 Bushbaby gene stable ID
## 666 Bushbaby gene name
## 667 Bushbaby protein or transcript stable ID
## 668 Bushbaby chromosome/scaffold name
## 669 Bushbaby chromosome/scaffold start (bp)
## 670 Bushbaby chromosome/scaffold end (bp)
## 671 Query protein or transcript ID
## 672 Last common ancestor with Bushbaby
## 673 Bushbaby homology type
## 674 %id. target Bushbaby gene identical to query gene
## 675 %id. query gene identical to target Bushbaby gene
## 676 Bushbaby Gene-order conservation score
## 677 Bushbaby Whole-genome alignment coverage
## 678 Bushbaby orthology confidence [0 low, 1 high]
## 679 C.intestinalis gene stable ID
## 680 C.intestinalis gene name
## 681 C.intestinalis protein or transcript stable ID
## 682 C.intestinalis chromosome/scaffold name
## 683 C.intestinalis chromosome/scaffold start (bp)
## 684 C.intestinalis chromosome/scaffold end (bp)
## 685 Query protein or transcript ID
## 686 Last common ancestor with C.intestinalis
## 687 C.intestinalis homology type
## 688 %id. target C.intestinalis gene identical to query gene
## 689 %id. query gene identical to target C.intestinalis gene
## 690 C.intestinalis Whole-genome alignment coverage
## 691 C.intestinalis orthology confidence [0 low, 1 high]
## 692 C.savignyi gene stable ID
## 693 C.savignyi gene name
## 694 C.savignyi protein or transcript stable ID
## 695 C.savignyi chromosome/scaffold name
## 696 C.savignyi chromosome/scaffold start (bp)
## 697 C.savignyi chromosome/scaffold end (bp)
## 698 Query protein or transcript ID
## 699 Last common ancestor with C.savignyi
## 700 C.savignyi homology type
## 701 %id. target C.savignyi gene identical to query gene
## 702 %id. query gene identical to target C.savignyi gene
## 703 C.savignyi Whole-genome alignment coverage
## 704 C.savignyi orthology confidence [0 low, 1 high]
## 705 Caenorhabditis elegans (PRJNA13758) gene stable ID
## 706 Caenorhabditis elegans (PRJNA13758) gene name
## 707 Caenorhabditis elegans (PRJNA13758) protein or transcript stable ID
## 708 Caenorhabditis elegans (PRJNA13758) chromosome/scaffold name
## 709 Caenorhabditis elegans (PRJNA13758) chromosome/scaffold start (bp)
## 710 Caenorhabditis elegans (PRJNA13758) chromosome/scaffold end (bp)
## 711 Query protein or transcript ID
## 712 Last common ancestor with Caenorhabditis elegans (PRJNA13758)
## 713 Caenorhabditis elegans (PRJNA13758) homology type
## 714 %id. target Caenorhabditis elegans (PRJNA13758) gene identical to query gene
## 715 %id. query gene identical to target Caenorhabditis elegans (PRJNA13758) gene
## 716 Caenorhabditis elegans (PRJNA13758) orthology confidence [0 low, 1 high]
## 717 Cat gene stable ID
## 718 Cat gene name
## 719 Cat protein or transcript stable ID
## 720 Cat chromosome/scaffold name
## 721 Cat chromosome/scaffold start (bp)
## 722 Cat chromosome/scaffold end (bp)
## 723 Query protein or transcript ID
## 724 Last common ancestor with Cat
## 725 Cat homology type
## 726 %id. target Cat gene identical to query gene
## 727 %id. query gene identical to target Cat gene
## 728 Cat Gene-order conservation score
## 729 Cat Whole-genome alignment coverage
## 730 Cat orthology confidence [0 low, 1 high]
## 731 Chacoan peccary gene stable ID
## 732 Chacoan peccary gene name
## 733 Chacoan peccary protein or transcript stable ID
## 734 Chacoan peccary chromosome/scaffold name
## 735 Chacoan peccary chromosome/scaffold start (bp)
## 736 Chacoan peccary chromosome/scaffold end (bp)
## 737 Query protein or transcript ID
## 738 Last common ancestor with Chacoan peccary
## 739 Chacoan peccary homology type
## 740 %id. target Chacoan peccary gene identical to query gene
## 741 %id. query gene identical to target Chacoan peccary gene
## 742 Chacoan peccary Gene-order conservation score
## 743 Chacoan peccary Whole-genome alignment coverage
## 744 Chacoan peccary orthology confidence [0 low, 1 high]
## 745 Channel bull blenny gene stable ID
## 746 Channel bull blenny gene name
## 747 Channel bull blenny protein or transcript stable ID
## 748 Channel bull blenny chromosome/scaffold name
## 749 Channel bull blenny chromosome/scaffold start (bp)
## 750 Channel bull blenny chromosome/scaffold end (bp)
## 751 Query protein or transcript ID
## 752 Last common ancestor with Channel bull blenny
## 753 Channel bull blenny homology type
## 754 %id. target Channel bull blenny gene identical to query gene
## 755 %id. query gene identical to target Channel bull blenny gene
## 756 Channel bull blenny Gene-order conservation score
## 757 Channel bull blenny Whole-genome alignment coverage
## 758 Channel bull blenny orthology confidence [0 low, 1 high]
## 759 Channel catfish gene stable ID
## 760 Channel catfish gene name
## 761 Channel catfish protein or transcript stable ID
## 762 Channel catfish chromosome/scaffold name
## 763 Channel catfish chromosome/scaffold start (bp)
## 764 Channel catfish chromosome/scaffold end (bp)
## 765 Query protein or transcript ID
## 766 Last common ancestor with Channel catfish
## 767 Channel catfish homology type
## 768 %id. target Channel catfish gene identical to query gene
## 769 %id. query gene identical to target Channel catfish gene
## 770 Channel catfish Gene-order conservation score
## 771 Channel catfish Whole-genome alignment coverage
## 772 Channel catfish orthology confidence [0 low, 1 high]
## 773 Chicken gene stable ID
## 774 Chicken gene name
## 775 Chicken protein or transcript stable ID
## 776 Chicken chromosome/scaffold name
## 777 Chicken chromosome/scaffold start (bp)
## 778 Chicken chromosome/scaffold end (bp)
## 779 Query protein or transcript ID
## 780 Last common ancestor with Chicken
## 781 Chicken homology type
## 782 %id. target Chicken gene identical to query gene
## 783 %id. query gene identical to target Chicken gene
## 784 Chicken Gene-order conservation score
## 785 Chicken Whole-genome alignment coverage
## 786 Chicken orthology confidence [0 low, 1 high]
## 787 Chimpanzee gene stable ID
## 788 Chimpanzee gene name
## 789 Chimpanzee protein or transcript stable ID
## 790 Chimpanzee chromosome/scaffold name
## 791 Chimpanzee chromosome/scaffold start (bp)
## 792 Chimpanzee chromosome/scaffold end (bp)
## 793 Query protein or transcript ID
## 794 Last common ancestor with Chimpanzee
## 795 Chimpanzee homology type
## 796 %id. target Chimpanzee gene identical to query gene
## 797 %id. query gene identical to target Chimpanzee gene
## 798 Chimpanzee Gene-order conservation score
## 799 Chimpanzee Whole-genome alignment coverage
## 800 Chimpanzee orthology confidence [0 low, 1 high]
## 801 Chinese hamster CHOK1GS gene stable ID
## 802 Chinese hamster CHOK1GS gene name
## 803 Chinese hamster CHOK1GS protein or transcript stable ID
## 804 Chinese hamster CHOK1GS chromosome/scaffold name
## 805 Chinese hamster CHOK1GS chromosome/scaffold start (bp)
## 806 Chinese hamster CHOK1GS chromosome/scaffold end (bp)
## 807 Query protein or transcript ID
## 808 Last common ancestor with Chinese hamster CHOK1GS
## 809 Chinese hamster CHOK1GS homology type
## 810 %id. target Chinese hamster CHOK1GS gene identical to query gene
## 811 %id. query gene identical to target Chinese hamster CHOK1GS gene
## 812 Chinese hamster CHOK1GS Gene-order conservation score
## 813 Chinese hamster CHOK1GS Whole-genome alignment coverage
## 814 Chinese hamster CHOK1GS orthology confidence [0 low, 1 high]
## 815 Chinese medaka gene stable ID
## 816 Chinese medaka gene name
## 817 Chinese medaka protein or transcript stable ID
## 818 Chinese medaka chromosome/scaffold name
## 819 Chinese medaka chromosome/scaffold start (bp)
## 820 Chinese medaka chromosome/scaffold end (bp)
## 821 Query protein or transcript ID
## 822 Last common ancestor with Chinese medaka
## 823 Chinese medaka homology type
## 824 %id. target Chinese medaka gene identical to query gene
## 825 %id. query gene identical to target Chinese medaka gene
## 826 Chinese medaka Gene-order conservation score
## 827 Chinese medaka Whole-genome alignment coverage
## 828 Chinese medaka orthology confidence [0 low, 1 high]
## 829 Chinese softshell turtle gene stable ID
## 830 Chinese softshell turtle gene name
## 831 Chinese softshell turtle protein or transcript stable ID
## 832 Chinese softshell turtle chromosome/scaffold name
## 833 Chinese softshell turtle chromosome/scaffold start (bp)
## 834 Chinese softshell turtle chromosome/scaffold end (bp)
## 835 Query protein or transcript ID
## 836 Last common ancestor with Chinese softshell turtle
## 837 Chinese softshell turtle homology type
## 838 %id. target Chinese softshell turtle gene identical to query gene
## 839 %id. query gene identical to target Chinese softshell turtle gene
## 840 Chinese softshell turtle Gene-order conservation score
## 841 Chinese softshell turtle Whole-genome alignment coverage
## 842 Chinese softshell turtle orthology confidence [0 low, 1 high]
## 843 Chinook salmon gene stable ID
## 844 Chinook salmon gene name
## 845 Chinook salmon protein or transcript stable ID
## 846 Chinook salmon chromosome/scaffold name
## 847 Chinook salmon chromosome/scaffold start (bp)
## 848 Chinook salmon chromosome/scaffold end (bp)
## 849 Query protein or transcript ID
## 850 Last common ancestor with Chinook salmon
## 851 Chinook salmon homology type
## 852 %id. target Chinook salmon gene identical to query gene
## 853 %id. query gene identical to target Chinook salmon gene
## 854 Chinook salmon Gene-order conservation score
## 855 Chinook salmon Whole-genome alignment coverage
## 856 Chinook salmon orthology confidence [0 low, 1 high]
## 857 Climbing perch gene stable ID
## 858 Climbing perch gene name
## 859 Climbing perch protein or transcript stable ID
## 860 Climbing perch chromosome/scaffold name
## 861 Climbing perch chromosome/scaffold start (bp)
## 862 Climbing perch chromosome/scaffold end (bp)
## 863 Query protein or transcript ID
## 864 Last common ancestor with Climbing perch
## 865 Climbing perch homology type
## 866 %id. target Climbing perch gene identical to query gene
## 867 %id. query gene identical to target Climbing perch gene
## 868 Climbing perch Gene-order conservation score
## 869 Climbing perch orthology confidence [0 low, 1 high]
## 870 Clown anemonefish gene stable ID
## 871 Clown anemonefish gene name
## 872 Clown anemonefish protein or transcript stable ID
## 873 Clown anemonefish chromosome/scaffold name
## 874 Clown anemonefish chromosome/scaffold start (bp)
## 875 Clown anemonefish chromosome/scaffold end (bp)
## 876 Query protein or transcript ID
## 877 Last common ancestor with Clown anemonefish
## 878 Clown anemonefish homology type
## 879 %id. target Clown anemonefish gene identical to query gene
## 880 %id. query gene identical to target Clown anemonefish gene
## 881 Clown anemonefish Gene-order conservation score
## 882 Clown anemonefish Whole-genome alignment coverage
## 883 Clown anemonefish orthology confidence [0 low, 1 high]
## 884 Coelacanth gene stable ID
## 885 Coelacanth gene name
## 886 Coelacanth protein or transcript stable ID
## 887 Coelacanth chromosome/scaffold name
## 888 Coelacanth chromosome/scaffold start (bp)
## 889 Coelacanth chromosome/scaffold end (bp)
## 890 Query protein or transcript ID
## 891 Last common ancestor with Coelacanth
## 892 Coelacanth homology type
## 893 %id. target Coelacanth gene identical to query gene
## 894 %id. query gene identical to target Coelacanth gene
## 895 Coelacanth Gene-order conservation score
## 896 Coelacanth Whole-genome alignment coverage
## 897 Coelacanth orthology confidence [0 low, 1 high]
## 898 Coho salmon gene stable ID
## 899 Coho salmon gene name
## 900 Coho salmon protein or transcript stable ID
## 901 Coho salmon chromosome/scaffold name
## 902 Coho salmon chromosome/scaffold start (bp)
## 903 Coho salmon chromosome/scaffold end (bp)
## 904 Query protein or transcript ID
## 905 Last common ancestor with Coho salmon
## 906 Coho salmon homology type
## 907 %id. target Coho salmon gene identical to query gene
## 908 %id. query gene identical to target Coho salmon gene
## 909 Coho salmon Gene-order conservation score
## 910 Coho salmon Whole-genome alignment coverage
## 911 Coho salmon orthology confidence [0 low, 1 high]
## 912 Collared flycatcher gene stable ID
## 913 Collared flycatcher gene name
## 914 Collared flycatcher protein or transcript stable ID
## 915 Collared flycatcher chromosome/scaffold name
## 916 Collared flycatcher chromosome/scaffold start (bp)
## 917 Collared flycatcher chromosome/scaffold end (bp)
## 918 Query protein or transcript ID
## 919 Last common ancestor with Collared flycatcher
## 920 Collared flycatcher homology type
## 921 %id. target Collared flycatcher gene identical to query gene
## 922 %id. query gene identical to target Collared flycatcher gene
## 923 Collared flycatcher Gene-order conservation score
## 924 Collared flycatcher orthology confidence [0 low, 1 high]
## 925 Common canary gene stable ID
## 926 Common canary gene name
## 927 Common canary protein or transcript stable ID
## 928 Common canary chromosome/scaffold name
## 929 Common canary chromosome/scaffold start (bp)
## 930 Common canary chromosome/scaffold end (bp)
## 931 Query protein or transcript ID
## 932 Last common ancestor with Common canary
## 933 Common canary homology type
## 934 %id. target Common canary gene identical to query gene
## 935 %id. query gene identical to target Common canary gene
## 936 Common canary Gene-order conservation score
## 937 Common canary Whole-genome alignment coverage
## 938 Common canary orthology confidence [0 low, 1 high]
## 939 Common carp gene stable ID
## 940 Common carp gene name
## 941 Common carp protein or transcript stable ID
## 942 Common carp chromosome/scaffold name
## 943 Common carp chromosome/scaffold start (bp)
## 944 Common carp chromosome/scaffold end (bp)
## 945 Query protein or transcript ID
## 946 Last common ancestor with Common carp
## 947 Common carp homology type
## 948 %id. target Common carp gene identical to query gene
## 949 %id. query gene identical to target Common carp gene
## 950 Common carp Gene-order conservation score
## 951 Common carp orthology confidence [0 low, 1 high]
## 952 Common wall lizard gene stable ID
## 953 Common wall lizard gene name
## 954 Common wall lizard protein or transcript stable ID
## 955 Common wall lizard chromosome/scaffold name
## 956 Common wall lizard chromosome/scaffold start (bp)
## 957 Common wall lizard chromosome/scaffold end (bp)
## 958 Query protein or transcript ID
## 959 Last common ancestor with Common wall lizard
## 960 Common wall lizard homology type
## 961 %id. target Common wall lizard gene identical to query gene
## 962 %id. query gene identical to target Common wall lizard gene
## 963 Common wall lizard Gene-order conservation score
## 964 Common wall lizard Whole-genome alignment coverage
## 965 Common wall lizard orthology confidence [0 low, 1 high]
## 966 Common wombat gene stable ID
## 967 Common wombat gene name
## 968 Common wombat protein or transcript stable ID
## 969 Common wombat chromosome/scaffold name
## 970 Common wombat chromosome/scaffold start (bp)
## 971 Common wombat chromosome/scaffold end (bp)
## 972 Query protein or transcript ID
## 973 Last common ancestor with Common wombat
## 974 Common wombat homology type
## 975 %id. target Common wombat gene identical to query gene
## 976 %id. query gene identical to target Common wombat gene
## 977 Common wombat Gene-order conservation score
## 978 Common wombat Whole-genome alignment coverage
## 979 Common wombat orthology confidence [0 low, 1 high]
## 980 Coquerel's sifaka gene stable ID
## 981 Coquerel's sifaka gene name
## 982 Coquerel's sifaka protein or transcript stable ID
## 983 Coquerel's sifaka chromosome/scaffold name
## 984 Coquerel's sifaka chromosome/scaffold start (bp)
## 985 Coquerel's sifaka chromosome/scaffold end (bp)
## 986 Query protein or transcript ID
## 987 Last common ancestor with Coquerel's sifaka
## 988 Coquerel's sifaka homology type
## 989 %id. target Coquerel's sifaka gene identical to query gene
## 990 %id. query gene identical to target Coquerel's sifaka gene
## 991 Coquerel's sifaka Gene-order conservation score
## 992 Coquerel's sifaka Whole-genome alignment coverage
## 993 Coquerel's sifaka orthology confidence [0 low, 1 high]
## 994 Cow gene stable ID
## 995 Cow gene name
## 996 Cow protein or transcript stable ID
## 997 Cow chromosome/scaffold name
## 998 Cow chromosome/scaffold start (bp)
## 999 Cow chromosome/scaffold end (bp)
## 1000 Query protein or transcript ID
## 1001 Last common ancestor with Cow
## 1002 Cow homology type
## 1003 %id. target Cow gene identical to query gene
## 1004 %id. query gene identical to target Cow gene
## 1005 Cow Gene-order conservation score
## 1006 Cow Whole-genome alignment coverage
## 1007 Cow orthology confidence [0 low, 1 high]
## 1008 Crab-eating macaque gene stable ID
## 1009 Crab-eating macaque gene name
## 1010 Crab-eating macaque protein or transcript stable ID
## 1011 Crab-eating macaque chromosome/scaffold name
## 1012 Crab-eating macaque chromosome/scaffold start (bp)
## 1013 Crab-eating macaque chromosome/scaffold end (bp)
## 1014 Query protein or transcript ID
## 1015 Last common ancestor with Crab-eating macaque
## 1016 Crab-eating macaque homology type
## 1017 %id. target Crab-eating macaque gene identical to query gene
## 1018 %id. query gene identical to target Crab-eating macaque gene
## 1019 Crab-eating macaque Gene-order conservation score
## 1020 Crab-eating macaque Whole-genome alignment coverage
## 1021 Crab-eating macaque orthology confidence [0 low, 1 high]
## 1022 Degu gene stable ID
## 1023 Degu gene name
## 1024 Degu protein or transcript stable ID
## 1025 Degu chromosome/scaffold name
## 1026 Degu chromosome/scaffold start (bp)
## 1027 Degu chromosome/scaffold end (bp)
## 1028 Query protein or transcript ID
## 1029 Last common ancestor with Degu
## 1030 Degu homology type
## 1031 %id. target Degu gene identical to query gene
## 1032 %id. query gene identical to target Degu gene
## 1033 Degu Gene-order conservation score
## 1034 Degu Whole-genome alignment coverage
## 1035 Degu orthology confidence [0 low, 1 high]
## 1036 Denticle herring gene stable ID
## 1037 Denticle herring gene name
## 1038 Denticle herring protein or transcript stable ID
## 1039 Denticle herring chromosome/scaffold name
## 1040 Denticle herring chromosome/scaffold start (bp)
## 1041 Denticle herring chromosome/scaffold end (bp)
## 1042 Query protein or transcript ID
## 1043 Last common ancestor with Denticle herring
## 1044 Denticle herring homology type
## 1045 %id. target Denticle herring gene identical to query gene
## 1046 %id. query gene identical to target Denticle herring gene
## 1047 Denticle herring Gene-order conservation score
## 1048 Denticle herring Whole-genome alignment coverage
## 1049 Denticle herring orthology confidence [0 low, 1 high]
## 1050 Dingo gene stable ID
## 1051 Dingo gene name
## 1052 Dingo protein or transcript stable ID
## 1053 Dingo chromosome/scaffold name
## 1054 Dingo chromosome/scaffold start (bp)
## 1055 Dingo chromosome/scaffold end (bp)
## 1056 Query protein or transcript ID
## 1057 Last common ancestor with Dingo
## 1058 Dingo homology type
## 1059 %id. target Dingo gene identical to query gene
## 1060 %id. query gene identical to target Dingo gene
## 1061 Dingo Gene-order conservation score
## 1062 Dingo Whole-genome alignment coverage
## 1063 Dingo orthology confidence [0 low, 1 high]
## 1064 Dog gene stable ID
## 1065 Dog gene name
## 1066 Dog protein or transcript stable ID
## 1067 Dog chromosome/scaffold name
## 1068 Dog chromosome/scaffold start (bp)
## 1069 Dog chromosome/scaffold end (bp)
## 1070 Query protein or transcript ID
## 1071 Last common ancestor with Dog
## 1072 Dog homology type
## 1073 %id. target Dog gene identical to query gene
## 1074 %id. query gene identical to target Dog gene
## 1075 Dog Gene-order conservation score
## 1076 Dog Whole-genome alignment coverage
## 1077 Dog orthology confidence [0 low, 1 high]
## 1078 Dolphin gene stable ID
## 1079 Dolphin gene name
## 1080 Dolphin protein or transcript stable ID
## 1081 Dolphin chromosome/scaffold name
## 1082 Dolphin chromosome/scaffold start (bp)
## 1083 Dolphin chromosome/scaffold end (bp)
## 1084 Query protein or transcript ID
## 1085 Last common ancestor with Dolphin
## 1086 Dolphin homology type
## 1087 %id. target Dolphin gene identical to query gene
## 1088 %id. query gene identical to target Dolphin gene
## 1089 Dolphin Gene-order conservation score
## 1090 Dolphin Whole-genome alignment coverage
## 1091 Dolphin orthology confidence [0 low, 1 high]
## 1092 Domestic yak gene stable ID
## 1093 Domestic yak gene name
## 1094 Domestic yak protein or transcript stable ID
## 1095 Domestic yak chromosome/scaffold name
## 1096 Domestic yak chromosome/scaffold start (bp)
## 1097 Domestic yak chromosome/scaffold end (bp)
## 1098 Query protein or transcript ID
## 1099 Last common ancestor with Domestic yak
## 1100 Domestic yak homology type
## 1101 %id. target Domestic yak gene identical to query gene
## 1102 %id. query gene identical to target Domestic yak gene
## 1103 Domestic yak Gene-order conservation score
## 1104 Domestic yak Whole-genome alignment coverage
## 1105 Domestic yak orthology confidence [0 low, 1 high]
## 1106 Donkey gene stable ID
## 1107 Donkey gene name
## 1108 Donkey protein or transcript stable ID
## 1109 Donkey chromosome/scaffold name
## 1110 Donkey chromosome/scaffold start (bp)
## 1111 Donkey chromosome/scaffold end (bp)
## 1112 Query protein or transcript ID
## 1113 Last common ancestor with Donkey
## 1114 Donkey homology type
## 1115 %id. target Donkey gene identical to query gene
## 1116 %id. query gene identical to target Donkey gene
## 1117 Donkey Gene-order conservation score
## 1118 Donkey orthology confidence [0 low, 1 high]
## 1119 Drill gene stable ID
## 1120 Drill gene name
## 1121 Drill protein or transcript stable ID
## 1122 Drill chromosome/scaffold name
## 1123 Drill chromosome/scaffold start (bp)
## 1124 Drill chromosome/scaffold end (bp)
## 1125 Query protein or transcript ID
## 1126 Last common ancestor with Drill
## 1127 Drill homology type
## 1128 %id. target Drill gene identical to query gene
## 1129 %id. query gene identical to target Drill gene
## 1130 Drill Gene-order conservation score
## 1131 Drill Whole-genome alignment coverage
## 1132 Drill orthology confidence [0 low, 1 high]
## 1133 Drosophila melanogaster gene stable ID
## 1134 Drosophila melanogaster gene name
## 1135 Drosophila melanogaster protein or transcript stable ID
## 1136 Drosophila melanogaster chromosome/scaffold name
## 1137 Drosophila melanogaster chromosome/scaffold start (bp)
## 1138 Drosophila melanogaster chromosome/scaffold end (bp)
## 1139 Query protein or transcript ID
## 1140 Last common ancestor with Drosophila melanogaster
## 1141 Drosophila melanogaster homology type
## 1142 %id. target Drosophila melanogaster gene identical to query gene
## 1143 %id. query gene identical to target Drosophila melanogaster gene
## 1144 Drosophila melanogaster orthology confidence [0 low, 1 high]
## 1145 Duck gene stable ID
## 1146 Duck gene name
## 1147 Duck protein or transcript stable ID
## 1148 Duck chromosome/scaffold name
## 1149 Duck chromosome/scaffold start (bp)
## 1150 Duck chromosome/scaffold end (bp)
## 1151 Query protein or transcript ID
## 1152 Last common ancestor with Duck
## 1153 Duck homology type
## 1154 %id. target Duck gene identical to query gene
## 1155 %id. query gene identical to target Duck gene
## 1156 Duck Gene-order conservation score
## 1157 Duck Whole-genome alignment coverage
## 1158 Duck orthology confidence [0 low, 1 high]
## 1159 Eastern brown snake gene stable ID
## 1160 Eastern brown snake gene name
## 1161 Eastern brown snake protein or transcript stable ID
## 1162 Eastern brown snake chromosome/scaffold name
## 1163 Eastern brown snake chromosome/scaffold start (bp)
## 1164 Eastern brown snake chromosome/scaffold end (bp)
## 1165 Query protein or transcript ID
## 1166 Last common ancestor with Eastern brown snake
## 1167 Eastern brown snake homology type
## 1168 %id. target Eastern brown snake gene identical to query gene
## 1169 %id. query gene identical to target Eastern brown snake gene
## 1170 Eastern brown snake Gene-order conservation score
## 1171 Eastern brown snake Whole-genome alignment coverage
## 1172 Eastern brown snake orthology confidence [0 low, 1 high]
## 1173 Eastern happy gene stable ID
## 1174 Eastern happy gene name
## 1175 Eastern happy protein or transcript stable ID
## 1176 Eastern happy chromosome/scaffold name
## 1177 Eastern happy chromosome/scaffold start (bp)
## 1178 Eastern happy chromosome/scaffold end (bp)
## 1179 Query protein or transcript ID
## 1180 Last common ancestor with Eastern happy
## 1181 Eastern happy homology type
## 1182 %id. target Eastern happy gene identical to query gene
## 1183 %id. query gene identical to target Eastern happy gene
## 1184 Eastern happy Gene-order conservation score
## 1185 Eastern happy Whole-genome alignment coverage
## 1186 Eastern happy orthology confidence [0 low, 1 high]
## 1187 Electric eel gene stable ID
## 1188 Electric eel gene name
## 1189 Electric eel protein or transcript stable ID
## 1190 Electric eel chromosome/scaffold name
## 1191 Electric eel chromosome/scaffold start (bp)
## 1192 Electric eel chromosome/scaffold end (bp)
## 1193 Query protein or transcript ID
## 1194 Last common ancestor with Electric eel
## 1195 Electric eel homology type
## 1196 %id. target Electric eel gene identical to query gene
## 1197 %id. query gene identical to target Electric eel gene
## 1198 Electric eel Gene-order conservation score
## 1199 Electric eel Whole-genome alignment coverage
## 1200 Electric eel orthology confidence [0 low, 1 high]
## 1201 Elephant gene stable ID
## 1202 Elephant gene name
## 1203 Elephant protein or transcript stable ID
## 1204 Elephant chromosome/scaffold name
## 1205 Elephant chromosome/scaffold start (bp)
## 1206 Elephant chromosome/scaffold end (bp)
## 1207 Query protein or transcript ID
## 1208 Last common ancestor with Elephant
## 1209 Elephant homology type
## 1210 %id. target Elephant gene identical to query gene
## 1211 %id. query gene identical to target Elephant gene
## 1212 Elephant Gene-order conservation score
## 1213 Elephant Whole-genome alignment coverage
## 1214 Elephant orthology confidence [0 low, 1 high]
## 1215 Elephant shark gene stable ID
## 1216 Elephant shark gene name
## 1217 Elephant shark protein or transcript stable ID
## 1218 Elephant shark chromosome/scaffold name
## 1219 Elephant shark chromosome/scaffold start (bp)
## 1220 Elephant shark chromosome/scaffold end (bp)
## 1221 Query protein or transcript ID
## 1222 Last common ancestor with Elephant shark
## 1223 Elephant shark homology type
## 1224 %id. target Elephant shark gene identical to query gene
## 1225 %id. query gene identical to target Elephant shark gene
## 1226 Elephant shark Whole-genome alignment coverage
## 1227 Elephant shark orthology confidence [0 low, 1 high]
## 1228 Eurasian red squirrel gene stable ID
## 1229 Eurasian red squirrel gene name
## 1230 Eurasian red squirrel protein or transcript stable ID
## 1231 Eurasian red squirrel chromosome/scaffold name
## 1232 Eurasian red squirrel chromosome/scaffold start (bp)
## 1233 Eurasian red squirrel chromosome/scaffold end (bp)
## 1234 Query protein or transcript ID
## 1235 Last common ancestor with Eurasian red squirrel
## 1236 Eurasian red squirrel homology type
## 1237 %id. target Eurasian red squirrel gene identical to query gene
## 1238 %id. query gene identical to target Eurasian red squirrel gene
## 1239 Eurasian red squirrel Gene-order conservation score
## 1240 Eurasian red squirrel Whole-genome alignment coverage
## 1241 Eurasian red squirrel orthology confidence [0 low, 1 high]
## 1242 European seabass gene stable ID
## 1243 European seabass gene name
## 1244 European seabass protein or transcript stable ID
## 1245 European seabass chromosome/scaffold name
## 1246 European seabass chromosome/scaffold start (bp)
## 1247 European seabass chromosome/scaffold end (bp)
## 1248 Query protein or transcript ID
## 1249 Last common ancestor with European seabass
## 1250 European seabass homology type
## 1251 %id. target European seabass gene identical to query gene
## 1252 %id. query gene identical to target European seabass gene
## 1253 European seabass Gene-order conservation score
## 1254 European seabass orthology confidence [0 low, 1 high]
## 1255 Ferret gene stable ID
## 1256 Ferret gene name
## 1257 Ferret protein or transcript stable ID
## 1258 Ferret chromosome/scaffold name
## 1259 Ferret chromosome/scaffold start (bp)
## 1260 Ferret chromosome/scaffold end (bp)
## 1261 Query protein or transcript ID
## 1262 Last common ancestor with Ferret
## 1263 Ferret homology type
## 1264 %id. target Ferret gene identical to query gene
## 1265 %id. query gene identical to target Ferret gene
## 1266 Ferret Gene-order conservation score
## 1267 Ferret Whole-genome alignment coverage
## 1268 Ferret orthology confidence [0 low, 1 high]
## 1269 Fugu gene stable ID
## 1270 Fugu gene name
## 1271 Fugu protein or transcript stable ID
## 1272 Fugu chromosome/scaffold name
## 1273 Fugu chromosome/scaffold start (bp)
## 1274 Fugu chromosome/scaffold end (bp)
## 1275 Query protein or transcript ID
## 1276 Last common ancestor with Fugu
## 1277 Fugu homology type
## 1278 %id. target Fugu gene identical to query gene
## 1279 %id. query gene identical to target Fugu gene
## 1280 Fugu Gene-order conservation score
## 1281 Fugu Whole-genome alignment coverage
## 1282 Fugu orthology confidence [0 low, 1 high]
## 1283 Giant panda gene stable ID
## 1284 Giant panda gene name
## 1285 Giant panda protein or transcript stable ID
## 1286 Giant panda chromosome/scaffold name
## 1287 Giant panda chromosome/scaffold start (bp)
## 1288 Giant panda chromosome/scaffold end (bp)
## 1289 Query protein or transcript ID
## 1290 Last common ancestor with Giant panda
## 1291 Giant panda homology type
## 1292 %id. target Giant panda gene identical to query gene
## 1293 %id. query gene identical to target Giant panda gene
## 1294 Giant panda Gene-order conservation score
## 1295 Giant panda orthology confidence [0 low, 1 high]
## 1296 Gibbon gene stable ID
## 1297 Gibbon gene name
## 1298 Gibbon protein or transcript stable ID
## 1299 Gibbon chromosome/scaffold name
## 1300 Gibbon chromosome/scaffold start (bp)
## 1301 Gibbon chromosome/scaffold end (bp)
## 1302 Query protein or transcript ID
## 1303 Last common ancestor with Gibbon
## 1304 Gibbon homology type
## 1305 %id. target Gibbon gene identical to query gene
## 1306 %id. query gene identical to target Gibbon gene
## 1307 Gibbon Gene-order conservation score
## 1308 Gibbon Whole-genome alignment coverage
## 1309 Gibbon orthology confidence [0 low, 1 high]
## 1310 Gilthead seabream gene stable ID
## 1311 Gilthead seabream gene name
## 1312 Gilthead seabream protein or transcript stable ID
## 1313 Gilthead seabream chromosome/scaffold name
## 1314 Gilthead seabream chromosome/scaffold start (bp)
## 1315 Gilthead seabream chromosome/scaffold end (bp)
## 1316 Query protein or transcript ID
## 1317 Last common ancestor with Gilthead seabream
## 1318 Gilthead seabream homology type
## 1319 %id. target Gilthead seabream gene identical to query gene
## 1320 %id. query gene identical to target Gilthead seabream gene
## 1321 Gilthead seabream Gene-order conservation score
## 1322 Gilthead seabream Whole-genome alignment coverage
## 1323 Gilthead seabream orthology confidence [0 low, 1 high]
## 1324 Goat gene stable ID
## 1325 Goat gene name
## 1326 Goat protein or transcript stable ID
## 1327 Goat chromosome/scaffold name
## 1328 Goat chromosome/scaffold start (bp)
## 1329 Goat chromosome/scaffold end (bp)
## 1330 Query protein or transcript ID
## 1331 Last common ancestor with Goat
## 1332 Goat homology type
## 1333 %id. target Goat gene identical to query gene
## 1334 %id. query gene identical to target Goat gene
## 1335 Goat Gene-order conservation score
## 1336 Goat Whole-genome alignment coverage
## 1337 Goat orthology confidence [0 low, 1 high]
## 1338 Golden Hamster gene stable ID
## 1339 Golden Hamster gene name
## 1340 Golden Hamster protein or transcript stable ID
## 1341 Golden Hamster chromosome/scaffold name
## 1342 Golden Hamster chromosome/scaffold start (bp)
## 1343 Golden Hamster chromosome/scaffold end (bp)
## 1344 Query protein or transcript ID
## 1345 Last common ancestor with Golden Hamster
## 1346 Golden Hamster homology type
## 1347 %id. target Golden Hamster gene identical to query gene
## 1348 %id. query gene identical to target Golden Hamster gene
## 1349 Golden Hamster Gene-order conservation score
## 1350 Golden Hamster Whole-genome alignment coverage
## 1351 Golden Hamster orthology confidence [0 low, 1 high]
## 1352 Golden eagle gene stable ID
## 1353 Golden eagle gene name
## 1354 Golden eagle protein or transcript stable ID
## 1355 Golden eagle chromosome/scaffold name
## 1356 Golden eagle chromosome/scaffold start (bp)
## 1357 Golden eagle chromosome/scaffold end (bp)
## 1358 Query protein or transcript ID
## 1359 Last common ancestor with Golden eagle
## 1360 Golden eagle homology type
## 1361 %id. target Golden eagle gene identical to query gene
## 1362 %id. query gene identical to target Golden eagle gene
## 1363 Golden eagle Gene-order conservation score
## 1364 Golden eagle Whole-genome alignment coverage
## 1365 Golden eagle orthology confidence [0 low, 1 high]
## 1366 Golden snub-nosed monkey gene stable ID
## 1367 Golden snub-nosed monkey gene name
## 1368 Golden snub-nosed monkey protein or transcript stable ID
## 1369 Golden snub-nosed monkey chromosome/scaffold name
## 1370 Golden snub-nosed monkey chromosome/scaffold start (bp)
## 1371 Golden snub-nosed monkey chromosome/scaffold end (bp)
## 1372 Query protein or transcript ID
## 1373 Last common ancestor with Golden snub-nosed monkey
## 1374 Golden snub-nosed monkey homology type
## 1375 %id. target Golden snub-nosed monkey gene identical to query gene
## 1376 %id. query gene identical to target Golden snub-nosed monkey gene
## 1377 Golden snub-nosed monkey Gene-order conservation score
## 1378 Golden snub-nosed monkey Whole-genome alignment coverage
## 1379 Golden snub-nosed monkey orthology confidence [0 low, 1 high]
## 1380 Golden-line barbel gene stable ID
## 1381 Golden-line barbel gene name
## 1382 Golden-line barbel protein or transcript stable ID
## 1383 Golden-line barbel chromosome/scaffold name
## 1384 Golden-line barbel chromosome/scaffold start (bp)
## 1385 Golden-line barbel chromosome/scaffold end (bp)
## 1386 Query protein or transcript ID
## 1387 Last common ancestor with Golden-line barbel
## 1388 Golden-line barbel homology type
## 1389 %id. target Golden-line barbel gene identical to query gene
## 1390 %id. query gene identical to target Golden-line barbel gene
## 1391 Golden-line barbel Gene-order conservation score
## 1392 Golden-line barbel Whole-genome alignment coverage
## 1393 Golden-line barbel orthology confidence [0 low, 1 high]
## 1394 Goldfish gene stable ID
## 1395 Goldfish gene name
## 1396 Goldfish protein or transcript stable ID
## 1397 Goldfish chromosome/scaffold name
## 1398 Goldfish chromosome/scaffold start (bp)
## 1399 Goldfish chromosome/scaffold end (bp)
## 1400 Query protein or transcript ID
## 1401 Last common ancestor with Goldfish
## 1402 Goldfish homology type
## 1403 %id. target Goldfish gene identical to query gene
## 1404 %id. query gene identical to target Goldfish gene
## 1405 Goldfish Gene-order conservation score
## 1406 Goldfish Whole-genome alignment coverage
## 1407 Goldfish orthology confidence [0 low, 1 high]
## 1408 Goodes thornscrub tortoise gene stable ID
## 1409 Goodes thornscrub tortoise gene name
## 1410 Goodes thornscrub tortoise protein or transcript stable ID
## 1411 Goodes thornscrub tortoise chromosome/scaffold name
## 1412 Goodes thornscrub tortoise chromosome/scaffold start (bp)
## 1413 Goodes thornscrub tortoise chromosome/scaffold end (bp)
## 1414 Query protein or transcript ID
## 1415 Last common ancestor with Goodes thornscrub tortoise
## 1416 Goodes thornscrub tortoise homology type
## 1417 %id. target Goodes thornscrub tortoise gene identical to query gene
## 1418 %id. query gene identical to target Goodes thornscrub tortoise gene
## 1419 Goodes thornscrub tortoise Gene-order conservation score
## 1420 Goodes thornscrub tortoise Whole-genome alignment coverage
## 1421 Goodes thornscrub tortoise orthology confidence [0 low, 1 high]
## 1422 Gorilla gene stable ID
## 1423 Gorilla gene name
## 1424 Gorilla protein or transcript stable ID
## 1425 Gorilla chromosome/scaffold name
## 1426 Gorilla chromosome/scaffold start (bp)
## 1427 Gorilla chromosome/scaffold end (bp)
## 1428 Query protein or transcript ID
## 1429 Last common ancestor with Gorilla
## 1430 Gorilla homology type
## 1431 %id. target Gorilla gene identical to query gene
## 1432 %id. query gene identical to target Gorilla gene
## 1433 Gorilla Gene-order conservation score
## 1434 Gorilla Whole-genome alignment coverage
## 1435 Gorilla orthology confidence [0 low, 1 high]
## 1436 Great Tit gene stable ID
## 1437 Great Tit gene name
## 1438 Great Tit protein or transcript stable ID
## 1439 Great Tit chromosome/scaffold name
## 1440 Great Tit chromosome/scaffold start (bp)
## 1441 Great Tit chromosome/scaffold end (bp)
## 1442 Query protein or transcript ID
## 1443 Last common ancestor with Great Tit
## 1444 Great Tit homology type
## 1445 %id. target Great Tit gene identical to query gene
## 1446 %id. query gene identical to target Great Tit gene
## 1447 Great Tit Gene-order conservation score
## 1448 Great Tit Whole-genome alignment coverage
## 1449 Great Tit orthology confidence [0 low, 1 high]
## 1450 Greater amberjack gene stable ID
## 1451 Greater amberjack gene name
## 1452 Greater amberjack protein or transcript stable ID
## 1453 Greater amberjack chromosome/scaffold name
## 1454 Greater amberjack chromosome/scaffold start (bp)
## 1455 Greater amberjack chromosome/scaffold end (bp)
## 1456 Query protein or transcript ID
## 1457 Last common ancestor with Greater amberjack
## 1458 Greater amberjack homology type
## 1459 %id. target Greater amberjack gene identical to query gene
## 1460 %id. query gene identical to target Greater amberjack gene
## 1461 Greater amberjack Gene-order conservation score
## 1462 Greater amberjack Whole-genome alignment coverage
## 1463 Greater amberjack orthology confidence [0 low, 1 high]
## 1464 Greater bamboo lemur gene stable ID
## 1465 Greater bamboo lemur gene name
## 1466 Greater bamboo lemur protein or transcript stable ID
## 1467 Greater bamboo lemur chromosome/scaffold name
## 1468 Greater bamboo lemur chromosome/scaffold start (bp)
## 1469 Greater bamboo lemur chromosome/scaffold end (bp)
## 1470 Query protein or transcript ID
## 1471 Last common ancestor with Greater bamboo lemur
## 1472 Greater bamboo lemur homology type
## 1473 %id. target Greater bamboo lemur gene identical to query gene
## 1474 %id. query gene identical to target Greater bamboo lemur gene
## 1475 Greater bamboo lemur Gene-order conservation score
## 1476 Greater bamboo lemur Whole-genome alignment coverage
## 1477 Greater bamboo lemur orthology confidence [0 low, 1 high]
## 1478 Greater horseshoe bat gene stable ID
## 1479 Greater horseshoe bat gene name
## 1480 Greater horseshoe bat protein or transcript stable ID
## 1481 Greater horseshoe bat chromosome/scaffold name
## 1482 Greater horseshoe bat chromosome/scaffold start (bp)
## 1483 Greater horseshoe bat chromosome/scaffold end (bp)
## 1484 Query protein or transcript ID
## 1485 Last common ancestor with Greater horseshoe bat
## 1486 Greater horseshoe bat homology type
## 1487 %id. target Greater horseshoe bat gene identical to query gene
## 1488 %id. query gene identical to target Greater horseshoe bat gene
## 1489 Greater horseshoe bat Gene-order conservation score
## 1490 Greater horseshoe bat Whole-genome alignment coverage
## 1491 Greater horseshoe bat orthology confidence [0 low, 1 high]
## 1492 Green anole gene stable ID
## 1493 Green anole gene name
## 1494 Green anole protein or transcript stable ID
## 1495 Green anole chromosome/scaffold name
## 1496 Green anole chromosome/scaffold start (bp)
## 1497 Green anole chromosome/scaffold end (bp)
## 1498 Query protein or transcript ID
## 1499 Last common ancestor with Green anole
## 1500 Green anole homology type
## 1501 %id. target Green anole gene identical to query gene
## 1502 %id. query gene identical to target Green anole gene
## 1503 Green anole Gene-order conservation score
## 1504 Green anole orthology confidence [0 low, 1 high]
## 1505 Guinea Pig gene stable ID
## 1506 Guinea Pig gene name
## 1507 Guinea Pig protein or transcript stable ID
## 1508 Guinea Pig chromosome/scaffold name
## 1509 Guinea Pig chromosome/scaffold start (bp)
## 1510 Guinea Pig chromosome/scaffold end (bp)
## 1511 Query protein or transcript ID
## 1512 Last common ancestor with Guinea Pig
## 1513 Guinea Pig homology type
## 1514 %id. target Guinea Pig gene identical to query gene
## 1515 %id. query gene identical to target Guinea Pig gene
## 1516 Guinea Pig Gene-order conservation score
## 1517 Guinea Pig Whole-genome alignment coverage
## 1518 Guinea Pig orthology confidence [0 low, 1 high]
## 1519 Guppy gene stable ID
## 1520 Guppy gene name
## 1521 Guppy protein or transcript stable ID
## 1522 Guppy chromosome/scaffold name
## 1523 Guppy chromosome/scaffold start (bp)
## 1524 Guppy chromosome/scaffold end (bp)
## 1525 Query protein or transcript ID
## 1526 Last common ancestor with Guppy
## 1527 Guppy homology type
## 1528 %id. target Guppy gene identical to query gene
## 1529 %id. query gene identical to target Guppy gene
## 1530 Guppy Gene-order conservation score
## 1531 Guppy Whole-genome alignment coverage
## 1532 Guppy orthology confidence [0 low, 1 high]
## 1533 Hagfish gene stable ID
## 1534 Hagfish gene name
## 1535 Hagfish protein or transcript stable ID
## 1536 Hagfish chromosome/scaffold name
## 1537 Hagfish chromosome/scaffold start (bp)
## 1538 Hagfish chromosome/scaffold end (bp)
## 1539 Query protein or transcript ID
## 1540 Last common ancestor with Hagfish
## 1541 Hagfish homology type
## 1542 %id. target Hagfish gene identical to query gene
## 1543 %id. query gene identical to target Hagfish gene
## 1544 Hagfish Whole-genome alignment coverage
## 1545 Hagfish orthology confidence [0 low, 1 high]
## 1546 Hedgehog gene stable ID
## 1547 Hedgehog gene name
## 1548 Hedgehog protein or transcript stable ID
## 1549 Hedgehog chromosome/scaffold name
## 1550 Hedgehog chromosome/scaffold start (bp)
## 1551 Hedgehog chromosome/scaffold end (bp)
## 1552 Query protein or transcript ID
## 1553 Last common ancestor with Hedgehog
## 1554 Hedgehog homology type
## 1555 %id. target Hedgehog gene identical to query gene
## 1556 %id. query gene identical to target Hedgehog gene
## 1557 Hedgehog Gene-order conservation score
## 1558 Hedgehog Whole-genome alignment coverage
## 1559 Hedgehog orthology confidence [0 low, 1 high]
## 1560 Horse gene stable ID
## 1561 Horse gene name
## 1562 Horse protein or transcript stable ID
## 1563 Horse chromosome/scaffold name
## 1564 Horse chromosome/scaffold start (bp)
## 1565 Horse chromosome/scaffold end (bp)
## 1566 Query protein or transcript ID
## 1567 Last common ancestor with Horse
## 1568 Horse homology type
## 1569 %id. target Horse gene identical to query gene
## 1570 %id. query gene identical to target Horse gene
## 1571 Horse Gene-order conservation score
## 1572 Horse Whole-genome alignment coverage
## 1573 Horse orthology confidence [0 low, 1 high]
## 1574 Huchen gene stable ID
## 1575 Huchen gene name
## 1576 Huchen protein or transcript stable ID
## 1577 Huchen chromosome/scaffold name
## 1578 Huchen chromosome/scaffold start (bp)
## 1579 Huchen chromosome/scaffold end (bp)
## 1580 Query protein or transcript ID
## 1581 Last common ancestor with Huchen
## 1582 Huchen homology type
## 1583 %id. target Huchen gene identical to query gene
## 1584 %id. query gene identical to target Huchen gene
## 1585 Huchen Gene-order conservation score
## 1586 Huchen Whole-genome alignment coverage
## 1587 Huchen orthology confidence [0 low, 1 high]
## 1588 Hybrid - Bos Indicus gene stable ID
## 1589 Hybrid - Bos Indicus gene name
## 1590 Hybrid - Bos Indicus protein or transcript stable ID
## 1591 Hybrid - Bos Indicus chromosome/scaffold name
## 1592 Hybrid - Bos Indicus chromosome/scaffold start (bp)
## 1593 Hybrid - Bos Indicus chromosome/scaffold end (bp)
## 1594 Query protein or transcript ID
## 1595 Last common ancestor with Hybrid - Bos Indicus
## 1596 Hybrid - Bos Indicus homology type
## 1597 %id. target Hybrid - Bos Indicus gene identical to query gene
## 1598 %id. query gene identical to target Hybrid - Bos Indicus gene
## 1599 Hybrid - Bos Indicus Gene-order conservation score
## 1600 Hybrid - Bos Indicus Whole-genome alignment coverage
## 1601 Hybrid - Bos Indicus orthology confidence [0 low, 1 high]
## 1602 Hyrax gene stable ID
## 1603 Hyrax gene name
## 1604 Hyrax protein or transcript stable ID
## 1605 Hyrax chromosome/scaffold name
## 1606 Hyrax chromosome/scaffold start (bp)
## 1607 Hyrax chromosome/scaffold end (bp)
## 1608 Query protein or transcript ID
## 1609 Last common ancestor with Hyrax
## 1610 Hyrax homology type
## 1611 %id. target Hyrax gene identical to query gene
## 1612 %id. query gene identical to target Hyrax gene
## 1613 Hyrax Gene-order conservation score
## 1614 Hyrax Whole-genome alignment coverage
## 1615 Hyrax orthology confidence [0 low, 1 high]
## 1616 Indian cobra gene stable ID
## 1617 Indian cobra gene name
## 1618 Indian cobra protein or transcript stable ID
## 1619 Indian cobra chromosome/scaffold name
## 1620 Indian cobra chromosome/scaffold start (bp)
## 1621 Indian cobra chromosome/scaffold end (bp)
## 1622 Query protein or transcript ID
## 1623 Last common ancestor with Indian cobra
## 1624 Indian cobra homology type
## 1625 %id. target Indian cobra gene identical to query gene
## 1626 %id. query gene identical to target Indian cobra gene
## 1627 Indian cobra Gene-order conservation score
## 1628 Indian cobra Whole-genome alignment coverage
## 1629 Indian cobra orthology confidence [0 low, 1 high]
## 1630 Indian medaka gene stable ID
## 1631 Indian medaka gene name
## 1632 Indian medaka protein or transcript stable ID
## 1633 Indian medaka chromosome/scaffold name
## 1634 Indian medaka chromosome/scaffold start (bp)
## 1635 Indian medaka chromosome/scaffold end (bp)
## 1636 Query protein or transcript ID
## 1637 Last common ancestor with Indian medaka
## 1638 Indian medaka homology type
## 1639 %id. target Indian medaka gene identical to query gene
## 1640 %id. query gene identical to target Indian medaka gene
## 1641 Indian medaka Gene-order conservation score
## 1642 Indian medaka Whole-genome alignment coverage
## 1643 Indian medaka orthology confidence [0 low, 1 high]
## 1644 Japanese medaka HdrR gene stable ID
## 1645 Japanese medaka HdrR gene name
## 1646 Japanese medaka HdrR protein or transcript stable ID
## 1647 Japanese medaka HdrR chromosome/scaffold name
## 1648 Japanese medaka HdrR chromosome/scaffold start (bp)
## 1649 Japanese medaka HdrR chromosome/scaffold end (bp)
## 1650 Query protein or transcript ID
## 1651 Last common ancestor with Japanese medaka HdrR
## 1652 Japanese medaka HdrR homology type
## 1653 %id. target Japanese medaka HdrR gene identical to query gene
## 1654 %id. query gene identical to target Japanese medaka HdrR gene
## 1655 Japanese medaka HdrR Gene-order conservation score
## 1656 Japanese medaka HdrR Whole-genome alignment coverage
## 1657 Japanese medaka HdrR orthology confidence [0 low, 1 high]
## 1658 Japanese quail gene stable ID
## 1659 Japanese quail gene name
## 1660 Japanese quail protein or transcript stable ID
## 1661 Japanese quail chromosome/scaffold name
## 1662 Japanese quail chromosome/scaffold start (bp)
## 1663 Japanese quail chromosome/scaffold end (bp)
## 1664 Query protein or transcript ID
## 1665 Last common ancestor with Japanese quail
## 1666 Japanese quail homology type
## 1667 %id. target Japanese quail gene identical to query gene
## 1668 %id. query gene identical to target Japanese quail gene
## 1669 Japanese quail Gene-order conservation score
## 1670 Japanese quail Whole-genome alignment coverage
## 1671 Japanese quail orthology confidence [0 low, 1 high]
## 1672 Javanese ricefish gene stable ID
## 1673 Javanese ricefish gene name
## 1674 Javanese ricefish protein or transcript stable ID
## 1675 Javanese ricefish chromosome/scaffold name
## 1676 Javanese ricefish chromosome/scaffold start (bp)
## 1677 Javanese ricefish chromosome/scaffold end (bp)
## 1678 Query protein or transcript ID
## 1679 Last common ancestor with Javanese ricefish
## 1680 Javanese ricefish homology type
## 1681 %id. target Javanese ricefish gene identical to query gene
## 1682 %id. query gene identical to target Javanese ricefish gene
## 1683 Javanese ricefish Gene-order conservation score
## 1684 Javanese ricefish Whole-genome alignment coverage
## 1685 Javanese ricefish orthology confidence [0 low, 1 high]
## 1686 Kakapo gene stable ID
## 1687 Kakapo gene name
## 1688 Kakapo protein or transcript stable ID
## 1689 Kakapo chromosome/scaffold name
## 1690 Kakapo chromosome/scaffold start (bp)
## 1691 Kakapo chromosome/scaffold end (bp)
## 1692 Query protein or transcript ID
## 1693 Last common ancestor with Kakapo
## 1694 Kakapo homology type
## 1695 %id. target Kakapo gene identical to query gene
## 1696 %id. query gene identical to target Kakapo gene
## 1697 Kakapo Gene-order conservation score
## 1698 Kakapo Whole-genome alignment coverage
## 1699 Kakapo orthology confidence [0 low, 1 high]
## 1700 Kangaroo rat gene stable ID
## 1701 Kangaroo rat gene name
## 1702 Kangaroo rat protein or transcript stable ID
## 1703 Kangaroo rat chromosome/scaffold name
## 1704 Kangaroo rat chromosome/scaffold start (bp)
## 1705 Kangaroo rat chromosome/scaffold end (bp)
## 1706 Query protein or transcript ID
## 1707 Last common ancestor with Kangaroo rat
## 1708 Kangaroo rat homology type
## 1709 %id. target Kangaroo rat gene identical to query gene
## 1710 %id. query gene identical to target Kangaroo rat gene
## 1711 Kangaroo rat Gene-order conservation score
## 1712 Kangaroo rat Whole-genome alignment coverage
## 1713 Kangaroo rat orthology confidence [0 low, 1 high]
## 1714 Koala gene stable ID
## 1715 Koala gene name
## 1716 Koala protein or transcript stable ID
## 1717 Koala chromosome/scaffold name
## 1718 Koala chromosome/scaffold start (bp)
## 1719 Koala chromosome/scaffold end (bp)
## 1720 Query protein or transcript ID
## 1721 Last common ancestor with Koala
## 1722 Koala homology type
## 1723 %id. target Koala gene identical to query gene
## 1724 %id. query gene identical to target Koala gene
## 1725 Koala Gene-order conservation score
## 1726 Koala Whole-genome alignment coverage
## 1727 Koala orthology confidence [0 low, 1 high]
## 1728 Lamprey gene stable ID
## 1729 Lamprey gene name
## 1730 Lamprey protein or transcript stable ID
## 1731 Lamprey chromosome/scaffold name
## 1732 Lamprey chromosome/scaffold start (bp)
## 1733 Lamprey chromosome/scaffold end (bp)
## 1734 Query protein or transcript ID
## 1735 Last common ancestor with Lamprey
## 1736 Lamprey homology type
## 1737 %id. target Lamprey gene identical to query gene
## 1738 %id. query gene identical to target Lamprey gene
## 1739 Lamprey Whole-genome alignment coverage
## 1740 Lamprey orthology confidence [0 low, 1 high]
## 1741 Large yellow croaker gene stable ID
## 1742 Large yellow croaker gene name
## 1743 Large yellow croaker protein or transcript stable ID
## 1744 Large yellow croaker chromosome/scaffold name
## 1745 Large yellow croaker chromosome/scaffold start (bp)
## 1746 Large yellow croaker chromosome/scaffold end (bp)
## 1747 Query protein or transcript ID
## 1748 Last common ancestor with Large yellow croaker
## 1749 Large yellow croaker homology type
## 1750 %id. target Large yellow croaker gene identical to query gene
## 1751 %id. query gene identical to target Large yellow croaker gene
## 1752 Large yellow croaker Gene-order conservation score
## 1753 Large yellow croaker Whole-genome alignment coverage
## 1754 Large yellow croaker orthology confidence [0 low, 1 high]
## 1755 Leishan spiny toad gene stable ID
## 1756 Leishan spiny toad gene name
## 1757 Leishan spiny toad protein or transcript stable ID
## 1758 Leishan spiny toad chromosome/scaffold name
## 1759 Leishan spiny toad chromosome/scaffold start (bp)
## 1760 Leishan spiny toad chromosome/scaffold end (bp)
## 1761 Query protein or transcript ID
## 1762 Last common ancestor with Leishan spiny toad
## 1763 Leishan spiny toad homology type
## 1764 %id. target Leishan spiny toad gene identical to query gene
## 1765 %id. query gene identical to target Leishan spiny toad gene
## 1766 Leishan spiny toad Gene-order conservation score
## 1767 Leishan spiny toad Whole-genome alignment coverage
## 1768 Leishan spiny toad orthology confidence [0 low, 1 high]
## 1769 Leopard gene stable ID
## 1770 Leopard gene name
## 1771 Leopard protein or transcript stable ID
## 1772 Leopard chromosome/scaffold name
## 1773 Leopard chromosome/scaffold start (bp)
## 1774 Leopard chromosome/scaffold end (bp)
## 1775 Query protein or transcript ID
## 1776 Last common ancestor with Leopard
## 1777 Leopard homology type
## 1778 %id. target Leopard gene identical to query gene
## 1779 %id. query gene identical to target Leopard gene
## 1780 Leopard Gene-order conservation score
## 1781 Leopard Whole-genome alignment coverage
## 1782 Leopard orthology confidence [0 low, 1 high]
## 1783 Lesser Egyptian jerboa gene stable ID
## 1784 Lesser Egyptian jerboa gene name
## 1785 Lesser Egyptian jerboa protein or transcript stable ID
## 1786 Lesser Egyptian jerboa chromosome/scaffold name
## 1787 Lesser Egyptian jerboa chromosome/scaffold start (bp)
## 1788 Lesser Egyptian jerboa chromosome/scaffold end (bp)
## 1789 Query protein or transcript ID
## 1790 Last common ancestor with Lesser Egyptian jerboa
## 1791 Lesser Egyptian jerboa homology type
## 1792 %id. target Lesser Egyptian jerboa gene identical to query gene
## 1793 %id. query gene identical to target Lesser Egyptian jerboa gene
## 1794 Lesser Egyptian jerboa Gene-order conservation score
## 1795 Lesser Egyptian jerboa Whole-genome alignment coverage
## 1796 Lesser Egyptian jerboa orthology confidence [0 low, 1 high]
## 1797 Lesser hedgehog tenrec gene stable ID
## 1798 Lesser hedgehog tenrec gene name
## 1799 Lesser hedgehog tenrec protein or transcript stable ID
## 1800 Lesser hedgehog tenrec chromosome/scaffold name
## 1801 Lesser hedgehog tenrec chromosome/scaffold start (bp)
## 1802 Lesser hedgehog tenrec chromosome/scaffold end (bp)
## 1803 Query protein or transcript ID
## 1804 Last common ancestor with Lesser hedgehog tenrec
## 1805 Lesser hedgehog tenrec homology type
## 1806 %id. target Lesser hedgehog tenrec gene identical to query gene
## 1807 %id. query gene identical to target Lesser hedgehog tenrec gene
## 1808 Lesser hedgehog tenrec Gene-order conservation score
## 1809 Lesser hedgehog tenrec Whole-genome alignment coverage
## 1810 Lesser hedgehog tenrec orthology confidence [0 low, 1 high]
## 1811 Lion gene stable ID
## 1812 Lion gene name
## 1813 Lion protein or transcript stable ID
## 1814 Lion chromosome/scaffold name
## 1815 Lion chromosome/scaffold start (bp)
## 1816 Lion chromosome/scaffold end (bp)
## 1817 Query protein or transcript ID
## 1818 Last common ancestor with Lion
## 1819 Lion homology type
## 1820 %id. target Lion gene identical to query gene
## 1821 %id. query gene identical to target Lion gene
## 1822 Lion Gene-order conservation score
## 1823 Lion Whole-genome alignment coverage
## 1824 Lion orthology confidence [0 low, 1 high]
## 1825 Long-tailed chinchilla gene stable ID
## 1826 Long-tailed chinchilla gene name
## 1827 Long-tailed chinchilla protein or transcript stable ID
## 1828 Long-tailed chinchilla chromosome/scaffold name
## 1829 Long-tailed chinchilla chromosome/scaffold start (bp)
## 1830 Long-tailed chinchilla chromosome/scaffold end (bp)
## 1831 Query protein or transcript ID
## 1832 Last common ancestor with Long-tailed chinchilla
## 1833 Long-tailed chinchilla homology type
## 1834 %id. target Long-tailed chinchilla gene identical to query gene
## 1835 %id. query gene identical to target Long-tailed chinchilla gene
## 1836 Long-tailed chinchilla Gene-order conservation score
## 1837 Long-tailed chinchilla Whole-genome alignment coverage
## 1838 Long-tailed chinchilla orthology confidence [0 low, 1 high]
## 1839 Lumpfish gene stable ID
## 1840 Lumpfish gene name
## 1841 Lumpfish protein or transcript stable ID
## 1842 Lumpfish chromosome/scaffold name
## 1843 Lumpfish chromosome/scaffold start (bp)
## 1844 Lumpfish chromosome/scaffold end (bp)
## 1845 Query protein or transcript ID
## 1846 Last common ancestor with Lumpfish
## 1847 Lumpfish homology type
## 1848 %id. target Lumpfish gene identical to query gene
## 1849 %id. query gene identical to target Lumpfish gene
## 1850 Lumpfish Gene-order conservation score
## 1851 Lumpfish Whole-genome alignment coverage
## 1852 Lumpfish orthology confidence [0 low, 1 high]
## 1853 Lyretail cichlid gene stable ID
## 1854 Lyretail cichlid gene name
## 1855 Lyretail cichlid protein or transcript stable ID
## 1856 Lyretail cichlid chromosome/scaffold name
## 1857 Lyretail cichlid chromosome/scaffold start (bp)
## 1858 Lyretail cichlid chromosome/scaffold end (bp)
## 1859 Query protein or transcript ID
## 1860 Last common ancestor with Lyretail cichlid
## 1861 Lyretail cichlid homology type
## 1862 %id. target Lyretail cichlid gene identical to query gene
## 1863 %id. query gene identical to target Lyretail cichlid gene
## 1864 Lyretail cichlid Gene-order conservation score
## 1865 Lyretail cichlid Whole-genome alignment coverage
## 1866 Lyretail cichlid orthology confidence [0 low, 1 high]
## 1867 Ma's night monkey gene stable ID
## 1868 Ma's night monkey gene name
## 1869 Ma's night monkey protein or transcript stable ID
## 1870 Ma's night monkey chromosome/scaffold name
## 1871 Ma's night monkey chromosome/scaffold start (bp)
## 1872 Ma's night monkey chromosome/scaffold end (bp)
## 1873 Query protein or transcript ID
## 1874 Last common ancestor with Ma's night monkey
## 1875 Ma's night monkey homology type
## 1876 %id. target Ma's night monkey gene identical to query gene
## 1877 %id. query gene identical to target Ma's night monkey gene
## 1878 Ma's night monkey Gene-order conservation score
## 1879 Ma's night monkey Whole-genome alignment coverage
## 1880 Ma's night monkey orthology confidence [0 low, 1 high]
## 1881 Macaque gene stable ID
## 1882 Macaque gene name
## 1883 Macaque protein or transcript stable ID
## 1884 Macaque chromosome/scaffold name
## 1885 Macaque chromosome/scaffold start (bp)
## 1886 Macaque chromosome/scaffold end (bp)
## 1887 Query protein or transcript ID
## 1888 Last common ancestor with Macaque
## 1889 Macaque homology type
## 1890 %id. target Macaque gene identical to query gene
## 1891 %id. query gene identical to target Macaque gene
## 1892 Macaque Gene-order conservation score
## 1893 Macaque Whole-genome alignment coverage
## 1894 Macaque orthology confidence [0 low, 1 high]
## 1895 Mainland tiger snake gene stable ID
## 1896 Mainland tiger snake gene name
## 1897 Mainland tiger snake protein or transcript stable ID
## 1898 Mainland tiger snake chromosome/scaffold name
## 1899 Mainland tiger snake chromosome/scaffold start (bp)
## 1900 Mainland tiger snake chromosome/scaffold end (bp)
## 1901 Query protein or transcript ID
## 1902 Last common ancestor with Mainland tiger snake
## 1903 Mainland tiger snake homology type
## 1904 %id. target Mainland tiger snake gene identical to query gene
## 1905 %id. query gene identical to target Mainland tiger snake gene
## 1906 Mainland tiger snake Gene-order conservation score
## 1907 Mainland tiger snake Whole-genome alignment coverage
## 1908 Mainland tiger snake orthology confidence [0 low, 1 high]
## 1909 Makobe Island cichlid gene stable ID
## 1910 Makobe Island cichlid gene name
## 1911 Makobe Island cichlid protein or transcript stable ID
## 1912 Makobe Island cichlid chromosome/scaffold name
## 1913 Makobe Island cichlid chromosome/scaffold start (bp)
## 1914 Makobe Island cichlid chromosome/scaffold end (bp)
## 1915 Query protein or transcript ID
## 1916 Last common ancestor with Makobe Island cichlid
## 1917 Makobe Island cichlid homology type
## 1918 %id. target Makobe Island cichlid gene identical to query gene
## 1919 %id. query gene identical to target Makobe Island cichlid gene
## 1920 Makobe Island cichlid Gene-order conservation score
## 1921 Makobe Island cichlid Whole-genome alignment coverage
## 1922 Makobe Island cichlid orthology confidence [0 low, 1 high]
## 1923 Mangrove rivulus gene stable ID
## 1924 Mangrove rivulus gene name
## 1925 Mangrove rivulus protein or transcript stable ID
## 1926 Mangrove rivulus chromosome/scaffold name
## 1927 Mangrove rivulus chromosome/scaffold start (bp)
## 1928 Mangrove rivulus chromosome/scaffold end (bp)
## 1929 Query protein or transcript ID
## 1930 Last common ancestor with Mangrove rivulus
## 1931 Mangrove rivulus homology type
## 1932 %id. target Mangrove rivulus gene identical to query gene
## 1933 %id. query gene identical to target Mangrove rivulus gene
## 1934 Mangrove rivulus Gene-order conservation score
## 1935 Mangrove rivulus Whole-genome alignment coverage
## 1936 Mangrove rivulus orthology confidence [0 low, 1 high]
## 1937 Medium ground-finch gene stable ID
## 1938 Medium ground-finch gene name
## 1939 Medium ground-finch protein or transcript stable ID
## 1940 Medium ground-finch chromosome/scaffold name
## 1941 Medium ground-finch chromosome/scaffold start (bp)
## 1942 Medium ground-finch chromosome/scaffold end (bp)
## 1943 Query protein or transcript ID
## 1944 Last common ancestor with Medium ground-finch
## 1945 Medium ground-finch homology type
## 1946 %id. target Medium ground-finch gene identical to query gene
## 1947 %id. query gene identical to target Medium ground-finch gene
## 1948 Medium ground-finch Gene-order conservation score
## 1949 Medium ground-finch Whole-genome alignment coverage
## 1950 Medium ground-finch orthology confidence [0 low, 1 high]
## 1951 Megabat gene stable ID
## 1952 Megabat gene name
## 1953 Megabat protein or transcript stable ID
## 1954 Megabat chromosome/scaffold name
## 1955 Megabat chromosome/scaffold start (bp)
## 1956 Megabat chromosome/scaffold end (bp)
## 1957 Query protein or transcript ID
## 1958 Last common ancestor with Megabat
## 1959 Megabat homology type
## 1960 %id. target Megabat gene identical to query gene
## 1961 %id. query gene identical to target Megabat gene
## 1962 Megabat Gene-order conservation score
## 1963 Megabat Whole-genome alignment coverage
## 1964 Megabat orthology confidence [0 low, 1 high]
## 1965 Mexican tetra gene stable ID
## 1966 Mexican tetra gene name
## 1967 Mexican tetra protein or transcript stable ID
## 1968 Mexican tetra chromosome/scaffold name
## 1969 Mexican tetra chromosome/scaffold start (bp)
## 1970 Mexican tetra chromosome/scaffold end (bp)
## 1971 Query protein or transcript ID
## 1972 Last common ancestor with Mexican tetra
## 1973 Mexican tetra homology type
## 1974 %id. target Mexican tetra gene identical to query gene
## 1975 %id. query gene identical to target Mexican tetra gene
## 1976 Mexican tetra Gene-order conservation score
## 1977 Mexican tetra Whole-genome alignment coverage
## 1978 Mexican tetra orthology confidence [0 low, 1 high]
## 1979 Microbat gene stable ID
## 1980 Microbat gene name
## 1981 Microbat protein or transcript stable ID
## 1982 Microbat chromosome/scaffold name
## 1983 Microbat chromosome/scaffold start (bp)
## 1984 Microbat chromosome/scaffold end (bp)
## 1985 Query protein or transcript ID
## 1986 Last common ancestor with Microbat
## 1987 Microbat homology type
## 1988 %id. target Microbat gene identical to query gene
## 1989 %id. query gene identical to target Microbat gene
## 1990 Microbat Gene-order conservation score
## 1991 Microbat Whole-genome alignment coverage
## 1992 Microbat orthology confidence [0 low, 1 high]
## 1993 Midas cichlid gene stable ID
## 1994 Midas cichlid gene name
## 1995 Midas cichlid protein or transcript stable ID
## 1996 Midas cichlid chromosome/scaffold name
## 1997 Midas cichlid chromosome/scaffold start (bp)
## 1998 Midas cichlid chromosome/scaffold end (bp)
## 1999 Query protein or transcript ID
## 2000 Last common ancestor with Midas cichlid
## 2001 Midas cichlid homology type
## 2002 %id. target Midas cichlid gene identical to query gene
## 2003 %id. query gene identical to target Midas cichlid gene
## 2004 Midas cichlid Gene-order conservation score
## 2005 Midas cichlid Whole-genome alignment coverage
## 2006 Midas cichlid orthology confidence [0 low, 1 high]
## 2007 Mouse gene stable ID
## 2008 Mouse gene name
## 2009 Mouse protein or transcript stable ID
## 2010 Mouse chromosome/scaffold name
## 2011 Mouse chromosome/scaffold start (bp)
## 2012 Mouse chromosome/scaffold end (bp)
## 2013 Query protein or transcript ID
## 2014 Last common ancestor with Mouse
## 2015 Mouse homology type
## 2016 %id. target Mouse gene identical to query gene
## 2017 %id. query gene identical to target Mouse gene
## 2018 Mouse Gene-order conservation score
## 2019 Mouse Whole-genome alignment coverage
## 2020 Mouse orthology confidence [0 low, 1 high]
## 2021 Mouse Lemur gene stable ID
## 2022 Mouse Lemur gene name
## 2023 Mouse Lemur protein or transcript stable ID
## 2024 Mouse Lemur chromosome/scaffold name
## 2025 Mouse Lemur chromosome/scaffold start (bp)
## 2026 Mouse Lemur chromosome/scaffold end (bp)
## 2027 Query protein or transcript ID
## 2028 Last common ancestor with Mouse Lemur
## 2029 Mouse Lemur homology type
## 2030 %id. target Mouse Lemur gene identical to query gene
## 2031 %id. query gene identical to target Mouse Lemur gene
## 2032 Mouse Lemur Gene-order conservation score
## 2033 Mouse Lemur Whole-genome alignment coverage
## 2034 Mouse Lemur orthology confidence [0 low, 1 high]
## 2035 Mummichog gene stable ID
## 2036 Mummichog gene name
## 2037 Mummichog protein or transcript stable ID
## 2038 Mummichog chromosome/scaffold name
## 2039 Mummichog chromosome/scaffold start (bp)
## 2040 Mummichog chromosome/scaffold end (bp)
## 2041 Query protein or transcript ID
## 2042 Last common ancestor with Mummichog
## 2043 Mummichog homology type
## 2044 %id. target Mummichog gene identical to query gene
## 2045 %id. query gene identical to target Mummichog gene
## 2046 Mummichog Gene-order conservation score
## 2047 Mummichog Whole-genome alignment coverage
## 2048 Mummichog orthology confidence [0 low, 1 high]
## 2049 Naked mole-rat female gene stable ID
## 2050 Naked mole-rat female gene name
## 2051 Naked mole-rat female protein or transcript stable ID
## 2052 Naked mole-rat female chromosome/scaffold name
## 2053 Naked mole-rat female chromosome/scaffold start (bp)
## 2054 Naked mole-rat female chromosome/scaffold end (bp)
## 2055 Query protein or transcript ID
## 2056 Last common ancestor with Naked mole-rat female
## 2057 Naked mole-rat female homology type
## 2058 %id. target Naked mole-rat female gene identical to query gene
## 2059 %id. query gene identical to target Naked mole-rat female gene
## 2060 Naked mole-rat female Gene-order conservation score
## 2061 Naked mole-rat female Whole-genome alignment coverage
## 2062 Naked mole-rat female orthology confidence [0 low, 1 high]
## 2063 Narwhal gene stable ID
## 2064 Narwhal gene name
## 2065 Narwhal protein or transcript stable ID
## 2066 Narwhal chromosome/scaffold name
## 2067 Narwhal chromosome/scaffold start (bp)
## 2068 Narwhal chromosome/scaffold end (bp)
## 2069 Query protein or transcript ID
## 2070 Last common ancestor with Narwhal
## 2071 Narwhal homology type
## 2072 %id. target Narwhal gene identical to query gene
## 2073 %id. query gene identical to target Narwhal gene
## 2074 Narwhal Gene-order conservation score
## 2075 Narwhal Whole-genome alignment coverage
## 2076 Narwhal orthology confidence [0 low, 1 high]
## 2077 Nile tilapia gene stable ID
## 2078 Nile tilapia gene name
## 2079 Nile tilapia protein or transcript stable ID
## 2080 Nile tilapia chromosome/scaffold name
## 2081 Nile tilapia chromosome/scaffold start (bp)
## 2082 Nile tilapia chromosome/scaffold end (bp)
## 2083 Query protein or transcript ID
## 2084 Last common ancestor with Nile tilapia
## 2085 Nile tilapia homology type
## 2086 %id. target Nile tilapia gene identical to query gene
## 2087 %id. query gene identical to target Nile tilapia gene
## 2088 Nile tilapia Gene-order conservation score
## 2089 Nile tilapia Whole-genome alignment coverage
## 2090 Nile tilapia orthology confidence [0 low, 1 high]
## 2091 Northern American deer mouse gene stable ID
## 2092 Northern American deer mouse gene name
## 2093 Northern American deer mouse protein or transcript stable ID
## 2094 Northern American deer mouse chromosome/scaffold name
## 2095 Northern American deer mouse chromosome/scaffold start (bp)
## 2096 Northern American deer mouse chromosome/scaffold end (bp)
## 2097 Query protein or transcript ID
## 2098 Last common ancestor with Northern American deer mouse
## 2099 Northern American deer mouse homology type
## 2100 %id. target Northern American deer mouse gene identical to query gene
## 2101 %id. query gene identical to target Northern American deer mouse gene
## 2102 Northern American deer mouse Gene-order conservation score
## 2103 Northern American deer mouse Whole-genome alignment coverage
## 2104 Northern American deer mouse orthology confidence [0 low, 1 high]
## 2105 Northern pike gene stable ID
## 2106 Northern pike gene name
## 2107 Northern pike protein or transcript stable ID
## 2108 Northern pike chromosome/scaffold name
## 2109 Northern pike chromosome/scaffold start (bp)
## 2110 Northern pike chromosome/scaffold end (bp)
## 2111 Query protein or transcript ID
## 2112 Last common ancestor with Northern pike
## 2113 Northern pike homology type
## 2114 %id. target Northern pike gene identical to query gene
## 2115 %id. query gene identical to target Northern pike gene
## 2116 Northern pike Gene-order conservation score
## 2117 Northern pike Whole-genome alignment coverage
## 2118 Northern pike orthology confidence [0 low, 1 high]
## 2119 Olive baboon gene stable ID
## 2120 Olive baboon gene name
## 2121 Olive baboon protein or transcript stable ID
## 2122 Olive baboon chromosome/scaffold name
## 2123 Olive baboon chromosome/scaffold start (bp)
## 2124 Olive baboon chromosome/scaffold end (bp)
## 2125 Query protein or transcript ID
## 2126 Last common ancestor with Olive baboon
## 2127 Olive baboon homology type
## 2128 %id. target Olive baboon gene identical to query gene
## 2129 %id. query gene identical to target Olive baboon gene
## 2130 Olive baboon Gene-order conservation score
## 2131 Olive baboon Whole-genome alignment coverage
## 2132 Olive baboon orthology confidence [0 low, 1 high]
## 2133 Opossum gene stable ID
## 2134 Opossum gene name
## 2135 Opossum protein or transcript stable ID
## 2136 Opossum chromosome/scaffold name
## 2137 Opossum chromosome/scaffold start (bp)
## 2138 Opossum chromosome/scaffold end (bp)
## 2139 Query protein or transcript ID
## 2140 Last common ancestor with Opossum
## 2141 Opossum homology type
## 2142 %id. target Opossum gene identical to query gene
## 2143 %id. query gene identical to target Opossum gene
## 2144 Opossum Gene-order conservation score
## 2145 Opossum Whole-genome alignment coverage
## 2146 Opossum orthology confidence [0 low, 1 high]
## 2147 Orange clownfish gene stable ID
## 2148 Orange clownfish gene name
## 2149 Orange clownfish protein or transcript stable ID
## 2150 Orange clownfish chromosome/scaffold name
## 2151 Orange clownfish chromosome/scaffold start (bp)
## 2152 Orange clownfish chromosome/scaffold end (bp)
## 2153 Query protein or transcript ID
## 2154 Last common ancestor with Orange clownfish
## 2155 Orange clownfish homology type
## 2156 %id. target Orange clownfish gene identical to query gene
## 2157 %id. query gene identical to target Orange clownfish gene
## 2158 Orange clownfish Gene-order conservation score
## 2159 Orange clownfish Whole-genome alignment coverage
## 2160 Orange clownfish orthology confidence [0 low, 1 high]
## 2161 Painted turtle gene stable ID
## 2162 Painted turtle gene name
## 2163 Painted turtle protein or transcript stable ID
## 2164 Painted turtle chromosome/scaffold name
## 2165 Painted turtle chromosome/scaffold start (bp)
## 2166 Painted turtle chromosome/scaffold end (bp)
## 2167 Query protein or transcript ID
## 2168 Last common ancestor with Painted turtle
## 2169 Painted turtle homology type
## 2170 %id. target Painted turtle gene identical to query gene
## 2171 %id. query gene identical to target Painted turtle gene
## 2172 Painted turtle Gene-order conservation score
## 2173 Painted turtle Whole-genome alignment coverage
## 2174 Painted turtle orthology confidence [0 low, 1 high]
## 2175 Paramormyrops kingsleyae gene stable ID
## 2176 Paramormyrops kingsleyae gene name
## 2177 Paramormyrops kingsleyae protein or transcript stable ID
## 2178 Paramormyrops kingsleyae chromosome/scaffold name
## 2179 Paramormyrops kingsleyae chromosome/scaffold start (bp)
## 2180 Paramormyrops kingsleyae chromosome/scaffold end (bp)
## 2181 Query protein or transcript ID
## 2182 Last common ancestor with Paramormyrops kingsleyae
## 2183 Paramormyrops kingsleyae homology type
## 2184 %id. target Paramormyrops kingsleyae gene identical to query gene
## 2185 %id. query gene identical to target Paramormyrops kingsleyae gene
## 2186 Paramormyrops kingsleyae Gene-order conservation score
## 2187 Paramormyrops kingsleyae Whole-genome alignment coverage
## 2188 Paramormyrops kingsleyae orthology confidence [0 low, 1 high]
## 2189 Pig gene stable ID
## 2190 Pig gene name
## 2191 Pig protein or transcript stable ID
## 2192 Pig chromosome/scaffold name
## 2193 Pig chromosome/scaffold start (bp)
## 2194 Pig chromosome/scaffold end (bp)
## 2195 Query protein or transcript ID
## 2196 Last common ancestor with Pig
## 2197 Pig homology type
## 2198 %id. target Pig gene identical to query gene
## 2199 %id. query gene identical to target Pig gene
## 2200 Pig Gene-order conservation score
## 2201 Pig Whole-genome alignment coverage
## 2202 Pig orthology confidence [0 low, 1 high]
## 2203 Pig-tailed macaque gene stable ID
## 2204 Pig-tailed macaque gene name
## 2205 Pig-tailed macaque protein or transcript stable ID
## 2206 Pig-tailed macaque chromosome/scaffold name
## 2207 Pig-tailed macaque chromosome/scaffold start (bp)
## 2208 Pig-tailed macaque chromosome/scaffold end (bp)
## 2209 Query protein or transcript ID
## 2210 Last common ancestor with Pig-tailed macaque
## 2211 Pig-tailed macaque homology type
## 2212 %id. target Pig-tailed macaque gene identical to query gene
## 2213 %id. query gene identical to target Pig-tailed macaque gene
## 2214 Pig-tailed macaque Gene-order conservation score
## 2215 Pig-tailed macaque Whole-genome alignment coverage
## 2216 Pig-tailed macaque orthology confidence [0 low, 1 high]
## 2217 Pika gene stable ID
## 2218 Pika gene name
## 2219 Pika protein or transcript stable ID
## 2220 Pika chromosome/scaffold name
## 2221 Pika chromosome/scaffold start (bp)
## 2222 Pika chromosome/scaffold end (bp)
## 2223 Query protein or transcript ID
## 2224 Last common ancestor with Pika
## 2225 Pika homology type
## 2226 %id. target Pika gene identical to query gene
## 2227 %id. query gene identical to target Pika gene
## 2228 Pika Gene-order conservation score
## 2229 Pika Whole-genome alignment coverage
## 2230 Pika orthology confidence [0 low, 1 high]
## 2231 Pike-perch gene stable ID
## 2232 Pike-perch gene name
## 2233 Pike-perch protein or transcript stable ID
## 2234 Pike-perch chromosome/scaffold name
## 2235 Pike-perch chromosome/scaffold start (bp)
## 2236 Pike-perch chromosome/scaffold end (bp)
## 2237 Query protein or transcript ID
## 2238 Last common ancestor with Pike-perch
## 2239 Pike-perch homology type
## 2240 %id. target Pike-perch gene identical to query gene
## 2241 %id. query gene identical to target Pike-perch gene
## 2242 Pike-perch Gene-order conservation score
## 2243 Pike-perch Whole-genome alignment coverage
## 2244 Pike-perch orthology confidence [0 low, 1 high]
## 2245 Pinecone soldierfish gene stable ID
## 2246 Pinecone soldierfish gene name
## 2247 Pinecone soldierfish protein or transcript stable ID
## 2248 Pinecone soldierfish chromosome/scaffold name
## 2249 Pinecone soldierfish chromosome/scaffold start (bp)
## 2250 Pinecone soldierfish chromosome/scaffold end (bp)
## 2251 Query protein or transcript ID
## 2252 Last common ancestor with Pinecone soldierfish
## 2253 Pinecone soldierfish homology type
## 2254 %id. target Pinecone soldierfish gene identical to query gene
## 2255 %id. query gene identical to target Pinecone soldierfish gene
## 2256 Pinecone soldierfish Gene-order conservation score
## 2257 Pinecone soldierfish Whole-genome alignment coverage
## 2258 Pinecone soldierfish orthology confidence [0 low, 1 high]
## 2259 Pink-footed goose gene stable ID
## 2260 Pink-footed goose gene name
## 2261 Pink-footed goose protein or transcript stable ID
## 2262 Pink-footed goose chromosome/scaffold name
## 2263 Pink-footed goose chromosome/scaffold start (bp)
## 2264 Pink-footed goose chromosome/scaffold end (bp)
## 2265 Query protein or transcript ID
## 2266 Last common ancestor with Pink-footed goose
## 2267 Pink-footed goose homology type
## 2268 %id. target Pink-footed goose gene identical to query gene
## 2269 %id. query gene identical to target Pink-footed goose gene
## 2270 Pink-footed goose Gene-order conservation score
## 2271 Pink-footed goose Whole-genome alignment coverage
## 2272 Pink-footed goose orthology confidence [0 low, 1 high]
## 2273 Platyfish gene stable ID
## 2274 Platyfish gene name
## 2275 Platyfish protein or transcript stable ID
## 2276 Platyfish chromosome/scaffold name
## 2277 Platyfish chromosome/scaffold start (bp)
## 2278 Platyfish chromosome/scaffold end (bp)
## 2279 Query protein or transcript ID
## 2280 Last common ancestor with Platyfish
## 2281 Platyfish homology type
## 2282 %id. target Platyfish gene identical to query gene
## 2283 %id. query gene identical to target Platyfish gene
## 2284 Platyfish Gene-order conservation score
## 2285 Platyfish Whole-genome alignment coverage
## 2286 Platyfish orthology confidence [0 low, 1 high]
## 2287 Platypus gene stable ID
## 2288 Platypus gene name
## 2289 Platypus protein or transcript stable ID
## 2290 Platypus chromosome/scaffold name
## 2291 Platypus chromosome/scaffold start (bp)
## 2292 Platypus chromosome/scaffold end (bp)
## 2293 Query protein or transcript ID
## 2294 Last common ancestor with Platypus
## 2295 Platypus homology type
## 2296 %id. target Platypus gene identical to query gene
## 2297 %id. query gene identical to target Platypus gene
## 2298 Platypus Gene-order conservation score
## 2299 Platypus Whole-genome alignment coverage
## 2300 Platypus orthology confidence [0 low, 1 high]
## 2301 Polar bear gene stable ID
## 2302 Polar bear gene name
## 2303 Polar bear protein or transcript stable ID
## 2304 Polar bear chromosome/scaffold name
## 2305 Polar bear chromosome/scaffold start (bp)
## 2306 Polar bear chromosome/scaffold end (bp)
## 2307 Query protein or transcript ID
## 2308 Last common ancestor with Polar bear
## 2309 Polar bear homology type
## 2310 %id. target Polar bear gene identical to query gene
## 2311 %id. query gene identical to target Polar bear gene
## 2312 Polar bear Gene-order conservation score
## 2313 Polar bear Whole-genome alignment coverage
## 2314 Polar bear orthology confidence [0 low, 1 high]
## 2315 Prairie vole gene stable ID
## 2316 Prairie vole gene name
## 2317 Prairie vole protein or transcript stable ID
## 2318 Prairie vole chromosome/scaffold name
## 2319 Prairie vole chromosome/scaffold start (bp)
## 2320 Prairie vole chromosome/scaffold end (bp)
## 2321 Query protein or transcript ID
## 2322 Last common ancestor with Prairie vole
## 2323 Prairie vole homology type
## 2324 %id. target Prairie vole gene identical to query gene
## 2325 %id. query gene identical to target Prairie vole gene
## 2326 Prairie vole Gene-order conservation score
## 2327 Prairie vole Whole-genome alignment coverage
## 2328 Prairie vole orthology confidence [0 low, 1 high]
## 2329 Rabbit gene stable ID
## 2330 Rabbit gene name
## 2331 Rabbit protein or transcript stable ID
## 2332 Rabbit chromosome/scaffold name
## 2333 Rabbit chromosome/scaffold start (bp)
## 2334 Rabbit chromosome/scaffold end (bp)
## 2335 Query protein or transcript ID
## 2336 Last common ancestor with Rabbit
## 2337 Rabbit homology type
## 2338 %id. target Rabbit gene identical to query gene
## 2339 %id. query gene identical to target Rabbit gene
## 2340 Rabbit Gene-order conservation score
## 2341 Rabbit Whole-genome alignment coverage
## 2342 Rabbit orthology confidence [0 low, 1 high]
## 2343 Rainbow trout gene stable ID
## 2344 Rainbow trout gene name
## 2345 Rainbow trout protein or transcript stable ID
## 2346 Rainbow trout chromosome/scaffold name
## 2347 Rainbow trout chromosome/scaffold start (bp)
## 2348 Rainbow trout chromosome/scaffold end (bp)
## 2349 Query protein or transcript ID
## 2350 Last common ancestor with Rainbow trout
## 2351 Rainbow trout homology type
## 2352 %id. target Rainbow trout gene identical to query gene
## 2353 %id. query gene identical to target Rainbow trout gene
## 2354 Rainbow trout Gene-order conservation score
## 2355 Rainbow trout orthology confidence [0 low, 1 high]
## 2356 Rat gene stable ID
## 2357 Rat gene name
## 2358 Rat protein or transcript stable ID
## 2359 Rat chromosome/scaffold name
## 2360 Rat chromosome/scaffold start (bp)
## 2361 Rat chromosome/scaffold end (bp)
## 2362 Query protein or transcript ID
## 2363 Last common ancestor with Rat
## 2364 Rat homology type
## 2365 %id. target Rat gene identical to query gene
## 2366 %id. query gene identical to target Rat gene
## 2367 Rat Gene-order conservation score
## 2368 Rat Whole-genome alignment coverage
## 2369 Rat orthology confidence [0 low, 1 high]
## 2370 Red fox gene stable ID
## 2371 Red fox gene name
## 2372 Red fox protein or transcript stable ID
## 2373 Red fox chromosome/scaffold name
## 2374 Red fox chromosome/scaffold start (bp)
## 2375 Red fox chromosome/scaffold end (bp)
## 2376 Query protein or transcript ID
## 2377 Last common ancestor with Red fox
## 2378 Red fox homology type
## 2379 %id. target Red fox gene identical to query gene
## 2380 %id. query gene identical to target Red fox gene
## 2381 Red fox Gene-order conservation score
## 2382 Red fox Whole-genome alignment coverage
## 2383 Red fox orthology confidence [0 low, 1 high]
## 2384 Red-bellied piranha gene stable ID
## 2385 Red-bellied piranha gene name
## 2386 Red-bellied piranha protein or transcript stable ID
## 2387 Red-bellied piranha chromosome/scaffold name
## 2388 Red-bellied piranha chromosome/scaffold start (bp)
## 2389 Red-bellied piranha chromosome/scaffold end (bp)
## 2390 Query protein or transcript ID
## 2391 Last common ancestor with Red-bellied piranha
## 2392 Red-bellied piranha homology type
## 2393 %id. target Red-bellied piranha gene identical to query gene
## 2394 %id. query gene identical to target Red-bellied piranha gene
## 2395 Red-bellied piranha Gene-order conservation score
## 2396 Red-bellied piranha Whole-genome alignment coverage
## 2397 Red-bellied piranha orthology confidence [0 low, 1 high]
## 2398 Reedfish gene stable ID
## 2399 Reedfish gene name
## 2400 Reedfish protein or transcript stable ID
## 2401 Reedfish chromosome/scaffold name
## 2402 Reedfish chromosome/scaffold start (bp)
## 2403 Reedfish chromosome/scaffold end (bp)
## 2404 Query protein or transcript ID
## 2405 Last common ancestor with Reedfish
## 2406 Reedfish homology type
## 2407 %id. target Reedfish gene identical to query gene
## 2408 %id. query gene identical to target Reedfish gene
## 2409 Reedfish Gene-order conservation score
## 2410 Reedfish Whole-genome alignment coverage
## 2411 Reedfish orthology confidence [0 low, 1 high]
## 2412 Ryukyu mouse gene stable ID
## 2413 Ryukyu mouse gene name
## 2414 Ryukyu mouse protein or transcript stable ID
## 2415 Ryukyu mouse chromosome/scaffold name
## 2416 Ryukyu mouse chromosome/scaffold start (bp)
## 2417 Ryukyu mouse chromosome/scaffold end (bp)
## 2418 Query protein or transcript ID
## 2419 Last common ancestor with Ryukyu mouse
## 2420 Ryukyu mouse homology type
## 2421 %id. target Ryukyu mouse gene identical to query gene
## 2422 %id. query gene identical to target Ryukyu mouse gene
## 2423 Ryukyu mouse Gene-order conservation score
## 2424 Ryukyu mouse Whole-genome alignment coverage
## 2425 Ryukyu mouse orthology confidence [0 low, 1 high]
## 2426 Saccharomyces cerevisiae gene stable ID
## 2427 Saccharomyces cerevisiae gene name
## 2428 Saccharomyces cerevisiae protein or transcript stable ID
## 2429 Saccharomyces cerevisiae chromosome/scaffold name
## 2430 Saccharomyces cerevisiae chromosome/scaffold start (bp)
## 2431 Saccharomyces cerevisiae chromosome/scaffold end (bp)
## 2432 Query protein or transcript ID
## 2433 Last common ancestor with Saccharomyces cerevisiae
## 2434 Saccharomyces cerevisiae homology type
## 2435 %id. target Saccharomyces cerevisiae gene identical to query gene
## 2436 %id. query gene identical to target Saccharomyces cerevisiae gene
## 2437 Saccharomyces cerevisiae orthology confidence [0 low, 1 high]
## 2438 Sailfin molly gene stable ID
## 2439 Sailfin molly gene name
## 2440 Sailfin molly protein or transcript stable ID
## 2441 Sailfin molly chromosome/scaffold name
## 2442 Sailfin molly chromosome/scaffold start (bp)
## 2443 Sailfin molly chromosome/scaffold end (bp)
## 2444 Query protein or transcript ID
## 2445 Last common ancestor with Sailfin molly
## 2446 Sailfin molly homology type
## 2447 %id. target Sailfin molly gene identical to query gene
## 2448 %id. query gene identical to target Sailfin molly gene
## 2449 Sailfin molly Gene-order conservation score
## 2450 Sailfin molly Whole-genome alignment coverage
## 2451 Sailfin molly orthology confidence [0 low, 1 high]
## 2452 Sheep gene stable ID
## 2453 Sheep gene name
## 2454 Sheep protein or transcript stable ID
## 2455 Sheep chromosome/scaffold name
## 2456 Sheep chromosome/scaffold start (bp)
## 2457 Sheep chromosome/scaffold end (bp)
## 2458 Query protein or transcript ID
## 2459 Last common ancestor with Sheep
## 2460 Sheep homology type
## 2461 %id. target Sheep gene identical to query gene
## 2462 %id. query gene identical to target Sheep gene
## 2463 Sheep Gene-order conservation score
## 2464 Sheep Whole-genome alignment coverage
## 2465 Sheep orthology confidence [0 low, 1 high]
## 2466 Sheepshead minnow gene stable ID
## 2467 Sheepshead minnow gene name
## 2468 Sheepshead minnow protein or transcript stable ID
## 2469 Sheepshead minnow chromosome/scaffold name
## 2470 Sheepshead minnow chromosome/scaffold start (bp)
## 2471 Sheepshead minnow chromosome/scaffold end (bp)
## 2472 Query protein or transcript ID
## 2473 Last common ancestor with Sheepshead minnow
## 2474 Sheepshead minnow homology type
## 2475 %id. target Sheepshead minnow gene identical to query gene
## 2476 %id. query gene identical to target Sheepshead minnow gene
## 2477 Sheepshead minnow Gene-order conservation score
## 2478 Sheepshead minnow Whole-genome alignment coverage
## 2479 Sheepshead minnow orthology confidence [0 low, 1 high]
## 2480 Shrew gene stable ID
## 2481 Shrew gene name
## 2482 Shrew protein or transcript stable ID
## 2483 Shrew chromosome/scaffold name
## 2484 Shrew chromosome/scaffold start (bp)
## 2485 Shrew chromosome/scaffold end (bp)
## 2486 Query protein or transcript ID
## 2487 Last common ancestor with Shrew
## 2488 Shrew homology type
## 2489 %id. target Shrew gene identical to query gene
## 2490 %id. query gene identical to target Shrew gene
## 2491 Shrew Gene-order conservation score
## 2492 Shrew Whole-genome alignment coverage
## 2493 Shrew orthology confidence [0 low, 1 high]
## 2494 Shrew mouse gene stable ID
## 2495 Shrew mouse gene name
## 2496 Shrew mouse protein or transcript stable ID
## 2497 Shrew mouse chromosome/scaffold name
## 2498 Shrew mouse chromosome/scaffold start (bp)
## 2499 Shrew mouse chromosome/scaffold end (bp)
## 2500 Query protein or transcript ID
## 2501 Last common ancestor with Shrew mouse
## 2502 Shrew mouse homology type
## 2503 %id. target Shrew mouse gene identical to query gene
## 2504 %id. query gene identical to target Shrew mouse gene
## 2505 Shrew mouse Gene-order conservation score
## 2506 Shrew mouse Whole-genome alignment coverage
## 2507 Shrew mouse orthology confidence [0 low, 1 high]
## 2508 Siamese fighting fish gene stable ID
## 2509 Siamese fighting fish gene name
## 2510 Siamese fighting fish protein or transcript stable ID
## 2511 Siamese fighting fish chromosome/scaffold name
## 2512 Siamese fighting fish chromosome/scaffold start (bp)
## 2513 Siamese fighting fish chromosome/scaffold end (bp)
## 2514 Query protein or transcript ID
## 2515 Last common ancestor with Siamese fighting fish
## 2516 Siamese fighting fish homology type
## 2517 %id. target Siamese fighting fish gene identical to query gene
## 2518 %id. query gene identical to target Siamese fighting fish gene
## 2519 Siamese fighting fish Gene-order conservation score
## 2520 Siamese fighting fish Whole-genome alignment coverage
## 2521 Siamese fighting fish orthology confidence [0 low, 1 high]
## 2522 Siberian musk deer gene stable ID
## 2523 Siberian musk deer gene name
## 2524 Siberian musk deer protein or transcript stable ID
## 2525 Siberian musk deer chromosome/scaffold name
## 2526 Siberian musk deer chromosome/scaffold start (bp)
## 2527 Siberian musk deer chromosome/scaffold end (bp)
## 2528 Query protein or transcript ID
## 2529 Last common ancestor with Siberian musk deer
## 2530 Siberian musk deer homology type
## 2531 %id. target Siberian musk deer gene identical to query gene
## 2532 %id. query gene identical to target Siberian musk deer gene
## 2533 Siberian musk deer Gene-order conservation score
## 2534 Siberian musk deer Whole-genome alignment coverage
## 2535 Siberian musk deer orthology confidence [0 low, 1 high]
## 2536 Sloth gene stable ID
## 2537 Sloth gene name
## 2538 Sloth protein or transcript stable ID
## 2539 Sloth chromosome/scaffold name
## 2540 Sloth chromosome/scaffold start (bp)
## 2541 Sloth chromosome/scaffold end (bp)
## 2542 Query protein or transcript ID
## 2543 Last common ancestor with Sloth
## 2544 Sloth homology type
## 2545 %id. target Sloth gene identical to query gene
## 2546 %id. query gene identical to target Sloth gene
## 2547 Sloth Gene-order conservation score
## 2548 Sloth Whole-genome alignment coverage
## 2549 Sloth orthology confidence [0 low, 1 high]
## 2550 Sooty mangabey gene stable ID
## 2551 Sooty mangabey gene name
## 2552 Sooty mangabey protein or transcript stable ID
## 2553 Sooty mangabey chromosome/scaffold name
## 2554 Sooty mangabey chromosome/scaffold start (bp)
## 2555 Sooty mangabey chromosome/scaffold end (bp)
## 2556 Query protein or transcript ID
## 2557 Last common ancestor with Sooty mangabey
## 2558 Sooty mangabey homology type
## 2559 %id. target Sooty mangabey gene identical to query gene
## 2560 %id. query gene identical to target Sooty mangabey gene
## 2561 Sooty mangabey Gene-order conservation score
## 2562 Sooty mangabey Whole-genome alignment coverage
## 2563 Sooty mangabey orthology confidence [0 low, 1 high]
## 2564 Sperm whale gene stable ID
## 2565 Sperm whale gene name
## 2566 Sperm whale protein or transcript stable ID
## 2567 Sperm whale chromosome/scaffold name
## 2568 Sperm whale chromosome/scaffold start (bp)
## 2569 Sperm whale chromosome/scaffold end (bp)
## 2570 Query protein or transcript ID
## 2571 Last common ancestor with Sperm whale
## 2572 Sperm whale homology type
## 2573 %id. target Sperm whale gene identical to query gene
## 2574 %id. query gene identical to target Sperm whale gene
## 2575 Sperm whale Gene-order conservation score
## 2576 Sperm whale Whole-genome alignment coverage
## 2577 Sperm whale orthology confidence [0 low, 1 high]
## 2578 Spiny chromis gene stable ID
## 2579 Spiny chromis gene name
## 2580 Spiny chromis protein or transcript stable ID
## 2581 Spiny chromis chromosome/scaffold name
## 2582 Spiny chromis chromosome/scaffold start (bp)
## 2583 Spiny chromis chromosome/scaffold end (bp)
## 2584 Query protein or transcript ID
## 2585 Last common ancestor with Spiny chromis
## 2586 Spiny chromis homology type
## 2587 %id. target Spiny chromis gene identical to query gene
## 2588 %id. query gene identical to target Spiny chromis gene
## 2589 Spiny chromis Gene-order conservation score
## 2590 Spiny chromis Whole-genome alignment coverage
## 2591 Spiny chromis orthology confidence [0 low, 1 high]
## 2592 Spotted gar gene stable ID
## 2593 Spotted gar gene name
## 2594 Spotted gar protein or transcript stable ID
## 2595 Spotted gar chromosome/scaffold name
## 2596 Spotted gar chromosome/scaffold start (bp)
## 2597 Spotted gar chromosome/scaffold end (bp)
## 2598 Query protein or transcript ID
## 2599 Last common ancestor with Spotted gar
## 2600 Spotted gar homology type
## 2601 %id. target Spotted gar gene identical to query gene
## 2602 %id. query gene identical to target Spotted gar gene
## 2603 Spotted gar Gene-order conservation score
## 2604 Spotted gar Whole-genome alignment coverage
## 2605 Spotted gar orthology confidence [0 low, 1 high]
## 2606 Squirrel gene stable ID
## 2607 Squirrel gene name
## 2608 Squirrel protein or transcript stable ID
## 2609 Squirrel chromosome/scaffold name
## 2610 Squirrel chromosome/scaffold start (bp)
## 2611 Squirrel chromosome/scaffold end (bp)
## 2612 Query protein or transcript ID
## 2613 Last common ancestor with Squirrel
## 2614 Squirrel homology type
## 2615 %id. target Squirrel gene identical to query gene
## 2616 %id. query gene identical to target Squirrel gene
## 2617 Squirrel Gene-order conservation score
## 2618 Squirrel Whole-genome alignment coverage
## 2619 Squirrel orthology confidence [0 low, 1 high]
## 2620 Steppe mouse gene stable ID
## 2621 Steppe mouse gene name
## 2622 Steppe mouse protein or transcript stable ID
## 2623 Steppe mouse chromosome/scaffold name
## 2624 Steppe mouse chromosome/scaffold start (bp)
## 2625 Steppe mouse chromosome/scaffold end (bp)
## 2626 Query protein or transcript ID
## 2627 Last common ancestor with Steppe mouse
## 2628 Steppe mouse homology type
## 2629 %id. target Steppe mouse gene identical to query gene
## 2630 %id. query gene identical to target Steppe mouse gene
## 2631 Steppe mouse Gene-order conservation score
## 2632 Steppe mouse Whole-genome alignment coverage
## 2633 Steppe mouse orthology confidence [0 low, 1 high]
## 2634 Stickleback gene stable ID
## 2635 Stickleback gene name
## 2636 Stickleback protein or transcript stable ID
## 2637 Stickleback chromosome/scaffold name
## 2638 Stickleback chromosome/scaffold start (bp)
## 2639 Stickleback chromosome/scaffold end (bp)
## 2640 Query protein or transcript ID
## 2641 Last common ancestor with Stickleback
## 2642 Stickleback homology type
## 2643 %id. target Stickleback gene identical to query gene
## 2644 %id. query gene identical to target Stickleback gene
## 2645 Stickleback Gene-order conservation score
## 2646 Stickleback Whole-genome alignment coverage
## 2647 Stickleback orthology confidence [0 low, 1 high]
## 2648 Sumatran orangutan gene stable ID
## 2649 Sumatran orangutan gene name
## 2650 Sumatran orangutan protein or transcript stable ID
## 2651 Sumatran orangutan chromosome/scaffold name
## 2652 Sumatran orangutan chromosome/scaffold start (bp)
## 2653 Sumatran orangutan chromosome/scaffold end (bp)
## 2654 Query protein or transcript ID
## 2655 Last common ancestor with Sumatran orangutan
## 2656 Sumatran orangutan homology type
## 2657 %id. target Sumatran orangutan gene identical to query gene
## 2658 %id. query gene identical to target Sumatran orangutan gene
## 2659 Sumatran orangutan Gene-order conservation score
## 2660 Sumatran orangutan Whole-genome alignment coverage
## 2661 Sumatran orangutan orthology confidence [0 low, 1 high]
## 2662 Tarsier gene stable ID
## 2663 Tarsier gene name
## 2664 Tarsier protein or transcript stable ID
## 2665 Tarsier chromosome/scaffold name
## 2666 Tarsier chromosome/scaffold start (bp)
## 2667 Tarsier chromosome/scaffold end (bp)
## 2668 Query protein or transcript ID
## 2669 Last common ancestor with Tarsier
## 2670 Tarsier homology type
## 2671 %id. target Tarsier gene identical to query gene
## 2672 %id. query gene identical to target Tarsier gene
## 2673 Tarsier Gene-order conservation score
## 2674 Tarsier Whole-genome alignment coverage
## 2675 Tarsier orthology confidence [0 low, 1 high]
## 2676 Tasmanian devil gene stable ID
## 2677 Tasmanian devil gene name
## 2678 Tasmanian devil protein or transcript stable ID
## 2679 Tasmanian devil chromosome/scaffold name
## 2680 Tasmanian devil chromosome/scaffold start (bp)
## 2681 Tasmanian devil chromosome/scaffold end (bp)
## 2682 Query protein or transcript ID
## 2683 Last common ancestor with Tasmanian devil
## 2684 Tasmanian devil homology type
## 2685 %id. target Tasmanian devil gene identical to query gene
## 2686 %id. query gene identical to target Tasmanian devil gene
## 2687 Tasmanian devil Gene-order conservation score
## 2688 Tasmanian devil orthology confidence [0 low, 1 high]
## 2689 Tetraodon gene stable ID
## 2690 Tetraodon gene name
## 2691 Tetraodon protein or transcript stable ID
## 2692 Tetraodon chromosome/scaffold name
## 2693 Tetraodon chromosome/scaffold start (bp)
## 2694 Tetraodon chromosome/scaffold end (bp)
## 2695 Query protein or transcript ID
## 2696 Last common ancestor with Tetraodon
## 2697 Tetraodon homology type
## 2698 %id. target Tetraodon gene identical to query gene
## 2699 %id. query gene identical to target Tetraodon gene
## 2700 Tetraodon Gene-order conservation score
## 2701 Tetraodon Whole-genome alignment coverage
## 2702 Tetraodon orthology confidence [0 low, 1 high]
## 2703 Three-toed box turtle gene stable ID
## 2704 Three-toed box turtle gene name
## 2705 Three-toed box turtle protein or transcript stable ID
## 2706 Three-toed box turtle chromosome/scaffold name
## 2707 Three-toed box turtle chromosome/scaffold start (bp)
## 2708 Three-toed box turtle chromosome/scaffold end (bp)
## 2709 Query protein or transcript ID
## 2710 Last common ancestor with Three-toed box turtle
## 2711 Three-toed box turtle homology type
## 2712 %id. target Three-toed box turtle gene identical to query gene
## 2713 %id. query gene identical to target Three-toed box turtle gene
## 2714 Three-toed box turtle Gene-order conservation score
## 2715 Three-toed box turtle Whole-genome alignment coverage
## 2716 Three-toed box turtle orthology confidence [0 low, 1 high]
## 2717 Tiger gene stable ID
## 2718 Tiger gene name
## 2719 Tiger protein or transcript stable ID
## 2720 Tiger chromosome/scaffold name
## 2721 Tiger chromosome/scaffold start (bp)
## 2722 Tiger chromosome/scaffold end (bp)
## 2723 Query protein or transcript ID
## 2724 Last common ancestor with Tiger
## 2725 Tiger homology type
## 2726 %id. target Tiger gene identical to query gene
## 2727 %id. query gene identical to target Tiger gene
## 2728 Tiger Gene-order conservation score
## 2729 Tiger Whole-genome alignment coverage
## 2730 Tiger orthology confidence [0 low, 1 high]
## 2731 Tiger tail seahorse gene stable ID
## 2732 Tiger tail seahorse gene name
## 2733 Tiger tail seahorse protein or transcript stable ID
## 2734 Tiger tail seahorse chromosome/scaffold name
## 2735 Tiger tail seahorse chromosome/scaffold start (bp)
## 2736 Tiger tail seahorse chromosome/scaffold end (bp)
## 2737 Query protein or transcript ID
## 2738 Last common ancestor with Tiger tail seahorse
## 2739 Tiger tail seahorse homology type
## 2740 %id. target Tiger tail seahorse gene identical to query gene
## 2741 %id. query gene identical to target Tiger tail seahorse gene
## 2742 Tiger tail seahorse Gene-order conservation score
## 2743 Tiger tail seahorse Whole-genome alignment coverage
## 2744 Tiger tail seahorse orthology confidence [0 low, 1 high]
## 2745 Tongue sole gene stable ID
## 2746 Tongue sole gene name
## 2747 Tongue sole protein or transcript stable ID
## 2748 Tongue sole chromosome/scaffold name
## 2749 Tongue sole chromosome/scaffold start (bp)
## 2750 Tongue sole chromosome/scaffold end (bp)
## 2751 Query protein or transcript ID
## 2752 Last common ancestor with Tongue sole
## 2753 Tongue sole homology type
## 2754 %id. target Tongue sole gene identical to query gene
## 2755 %id. query gene identical to target Tongue sole gene
## 2756 Tongue sole Gene-order conservation score
## 2757 Tongue sole Whole-genome alignment coverage
## 2758 Tongue sole orthology confidence [0 low, 1 high]
## 2759 Tree Shrew gene stable ID
## 2760 Tree Shrew gene name
## 2761 Tree Shrew protein or transcript stable ID
## 2762 Tree Shrew chromosome/scaffold name
## 2763 Tree Shrew chromosome/scaffold start (bp)
## 2764 Tree Shrew chromosome/scaffold end (bp)
## 2765 Query protein or transcript ID
## 2766 Last common ancestor with Tree Shrew
## 2767 Tree Shrew homology type
## 2768 %id. target Tree Shrew gene identical to query gene
## 2769 %id. query gene identical to target Tree Shrew gene
## 2770 Tree Shrew Gene-order conservation score
## 2771 Tree Shrew Whole-genome alignment coverage
## 2772 Tree Shrew orthology confidence [0 low, 1 high]
## 2773 Tropical clawed frog gene stable ID
## 2774 Tropical clawed frog gene name
## 2775 Tropical clawed frog protein or transcript stable ID
## 2776 Tropical clawed frog chromosome/scaffold name
## 2777 Tropical clawed frog chromosome/scaffold start (bp)
## 2778 Tropical clawed frog chromosome/scaffold end (bp)
## 2779 Query protein or transcript ID
## 2780 Last common ancestor with Tropical clawed frog
## 2781 Tropical clawed frog homology type
## 2782 %id. target Tropical clawed frog gene identical to query gene
## 2783 %id. query gene identical to target Tropical clawed frog gene
## 2784 Tropical clawed frog Gene-order conservation score
## 2785 Tropical clawed frog orthology confidence [0 low, 1 high]
## 2786 Tuatara gene stable ID
## 2787 Tuatara gene name
## 2788 Tuatara protein or transcript stable ID
## 2789 Tuatara chromosome/scaffold name
## 2790 Tuatara chromosome/scaffold start (bp)
## 2791 Tuatara chromosome/scaffold end (bp)
## 2792 Query protein or transcript ID
## 2793 Last common ancestor with Tuatara
## 2794 Tuatara homology type
## 2795 %id. target Tuatara gene identical to query gene
## 2796 %id. query gene identical to target Tuatara gene
## 2797 Tuatara Gene-order conservation score
## 2798 Tuatara Whole-genome alignment coverage
## 2799 Tuatara orthology confidence [0 low, 1 high]
## 2800 Turbot gene stable ID
## 2801 Turbot gene name
## 2802 Turbot protein or transcript stable ID
## 2803 Turbot chromosome/scaffold name
## 2804 Turbot chromosome/scaffold start (bp)
## 2805 Turbot chromosome/scaffold end (bp)
## 2806 Query protein or transcript ID
## 2807 Last common ancestor with Turbot
## 2808 Turbot homology type
## 2809 %id. target Turbot gene identical to query gene
## 2810 %id. query gene identical to target Turbot gene
## 2811 Turbot Gene-order conservation score
## 2812 Turbot orthology confidence [0 low, 1 high]
## 2813 Turkey gene stable ID
## 2814 Turkey gene name
## 2815 Turkey protein or transcript stable ID
## 2816 Turkey chromosome/scaffold name
## 2817 Turkey chromosome/scaffold start (bp)
## 2818 Turkey chromosome/scaffold end (bp)
## 2819 Query protein or transcript ID
## 2820 Last common ancestor with Turkey
## 2821 Turkey homology type
## 2822 %id. target Turkey gene identical to query gene
## 2823 %id. query gene identical to target Turkey gene
## 2824 Turkey Gene-order conservation score
## 2825 Turkey orthology confidence [0 low, 1 high]
## 2826 Turquoise killifish gene stable ID
## 2827 Turquoise killifish gene name
## 2828 Turquoise killifish protein or transcript stable ID
## 2829 Turquoise killifish chromosome/scaffold name
## 2830 Turquoise killifish chromosome/scaffold start (bp)
## 2831 Turquoise killifish chromosome/scaffold end (bp)
## 2832 Query protein or transcript ID
## 2833 Last common ancestor with Turquoise killifish
## 2834 Turquoise killifish homology type
## 2835 %id. target Turquoise killifish gene identical to query gene
## 2836 %id. query gene identical to target Turquoise killifish gene
## 2837 Turquoise killifish Gene-order conservation score
## 2838 Turquoise killifish Whole-genome alignment coverage
## 2839 Turquoise killifish orthology confidence [0 low, 1 high]
## 2840 Upper Galilee mountains blind mole rat gene stable ID
## 2841 Upper Galilee mountains blind mole rat gene name
## 2842 Upper Galilee mountains blind mole rat protein or transcript stable ID
## 2843 Upper Galilee mountains blind mole rat chromosome/scaffold name
## 2844 Upper Galilee mountains blind mole rat chromosome/scaffold start (bp)
## 2845 Upper Galilee mountains blind mole rat chromosome/scaffold end (bp)
## 2846 Query protein or transcript ID
## 2847 Last common ancestor with Upper Galilee mountains blind mole rat
## 2848 Upper Galilee mountains blind mole rat homology type
## 2849 %id. target Upper Galilee mountains blind mole rat gene identical to query gene
## 2850 %id. query gene identical to target Upper Galilee mountains blind mole rat gene
## 2851 Upper Galilee mountains blind mole rat Gene-order conservation score
## 2852 Upper Galilee mountains blind mole rat Whole-genome alignment coverage
## 2853 Upper Galilee mountains blind mole rat orthology confidence [0 low, 1 high]
## 2854 Vaquita gene stable ID
## 2855 Vaquita gene name
## 2856 Vaquita protein or transcript stable ID
## 2857 Vaquita chromosome/scaffold name
## 2858 Vaquita chromosome/scaffold start (bp)
## 2859 Vaquita chromosome/scaffold end (bp)
## 2860 Query protein or transcript ID
## 2861 Last common ancestor with Vaquita
## 2862 Vaquita homology type
## 2863 %id. target Vaquita gene identical to query gene
## 2864 %id. query gene identical to target Vaquita gene
## 2865 Vaquita Gene-order conservation score
## 2866 Vaquita Whole-genome alignment coverage
## 2867 Vaquita orthology confidence [0 low, 1 high]
## 2868 Vervet-AGM gene stable ID
## 2869 Vervet-AGM gene name
## 2870 Vervet-AGM protein or transcript stable ID
## 2871 Vervet-AGM chromosome/scaffold name
## 2872 Vervet-AGM chromosome/scaffold start (bp)
## 2873 Vervet-AGM chromosome/scaffold end (bp)
## 2874 Query protein or transcript ID
## 2875 Last common ancestor with Vervet-AGM
## 2876 Vervet-AGM homology type
## 2877 %id. target Vervet-AGM gene identical to query gene
## 2878 %id. query gene identical to target Vervet-AGM gene
## 2879 Vervet-AGM Gene-order conservation score
## 2880 Vervet-AGM Whole-genome alignment coverage
## 2881 Vervet-AGM orthology confidence [0 low, 1 high]
## 2882 Wallaby gene stable ID
## 2883 Wallaby gene name
## 2884 Wallaby protein or transcript stable ID
## 2885 Wallaby chromosome/scaffold name
## 2886 Wallaby chromosome/scaffold start (bp)
## 2887 Wallaby chromosome/scaffold end (bp)
## 2888 Query protein or transcript ID
## 2889 Last common ancestor with Wallaby
## 2890 Wallaby homology type
## 2891 %id. target Wallaby gene identical to query gene
## 2892 %id. query gene identical to target Wallaby gene
## 2893 Wallaby Gene-order conservation score
## 2894 Wallaby Whole-genome alignment coverage
## 2895 Wallaby orthology confidence [0 low, 1 high]
## 2896 White-tufted-ear marmoset gene stable ID
## 2897 White-tufted-ear marmoset gene name
## 2898 White-tufted-ear marmoset protein or transcript stable ID
## 2899 White-tufted-ear marmoset chromosome/scaffold name
## 2900 White-tufted-ear marmoset chromosome/scaffold start (bp)
## 2901 White-tufted-ear marmoset chromosome/scaffold end (bp)
## 2902 Query protein or transcript ID
## 2903 Last common ancestor with White-tufted-ear marmoset
## 2904 White-tufted-ear marmoset homology type
## 2905 %id. target White-tufted-ear marmoset gene identical to query gene
## 2906 %id. query gene identical to target White-tufted-ear marmoset gene
## 2907 White-tufted-ear marmoset Gene-order conservation score
## 2908 White-tufted-ear marmoset Whole-genome alignment coverage
## 2909 White-tufted-ear marmoset orthology confidence [0 low, 1 high]
## 2910 Wild yak gene stable ID
## 2911 Wild yak gene name
## 2912 Wild yak protein or transcript stable ID
## 2913 Wild yak chromosome/scaffold name
## 2914 Wild yak chromosome/scaffold start (bp)
## 2915 Wild yak chromosome/scaffold end (bp)
## 2916 Query protein or transcript ID
## 2917 Last common ancestor with Wild yak
## 2918 Wild yak homology type
## 2919 %id. target Wild yak gene identical to query gene
## 2920 %id. query gene identical to target Wild yak gene
## 2921 Wild yak Gene-order conservation score
## 2922 Wild yak Whole-genome alignment coverage
## 2923 Wild yak orthology confidence [0 low, 1 high]
## 2924 Yarkand deer gene stable ID
## 2925 Yarkand deer gene name
## 2926 Yarkand deer protein or transcript stable ID
## 2927 Yarkand deer chromosome/scaffold name
## 2928 Yarkand deer chromosome/scaffold start (bp)
## 2929 Yarkand deer chromosome/scaffold end (bp)
## 2930 Query protein or transcript ID
## 2931 Last common ancestor with Yarkand deer
## 2932 Yarkand deer homology type
## 2933 %id. target Yarkand deer gene identical to query gene
## 2934 %id. query gene identical to target Yarkand deer gene
## 2935 Yarkand deer Gene-order conservation score
## 2936 Yarkand deer Whole-genome alignment coverage
## 2937 Yarkand deer orthology confidence [0 low, 1 high]
## 2938 Yellowtail amberjack gene stable ID
## 2939 Yellowtail amberjack gene name
## 2940 Yellowtail amberjack protein or transcript stable ID
## 2941 Yellowtail amberjack chromosome/scaffold name
## 2942 Yellowtail amberjack chromosome/scaffold start (bp)
## 2943 Yellowtail amberjack chromosome/scaffold end (bp)
## 2944 Query protein or transcript ID
## 2945 Last common ancestor with Yellowtail amberjack
## 2946 Yellowtail amberjack homology type
## 2947 %id. target Yellowtail amberjack gene identical to query gene
## 2948 %id. query gene identical to target Yellowtail amberjack gene
## 2949 Yellowtail amberjack Gene-order conservation score
## 2950 Yellowtail amberjack Whole-genome alignment coverage
## 2951 Yellowtail amberjack orthology confidence [0 low, 1 high]
## 2952 Zebra finch gene stable ID
## 2953 Zebra finch gene name
## 2954 Zebra finch protein or transcript stable ID
## 2955 Zebra finch chromosome/scaffold name
## 2956 Zebra finch chromosome/scaffold start (bp)
## 2957 Zebra finch chromosome/scaffold end (bp)
## 2958 Query protein or transcript ID
## 2959 Last common ancestor with Zebra finch
## 2960 Zebra finch homology type
## 2961 %id. target Zebra finch gene identical to query gene
## 2962 %id. query gene identical to target Zebra finch gene
## 2963 Zebra finch Gene-order conservation score
## 2964 Zebra finch Whole-genome alignment coverage
## 2965 Zebra finch orthology confidence [0 low, 1 high]
## 2966 Zebra mbuna gene stable ID
## 2967 Zebra mbuna gene name
## 2968 Zebra mbuna protein or transcript stable ID
## 2969 Zebra mbuna chromosome/scaffold name
## 2970 Zebra mbuna chromosome/scaffold start (bp)
## 2971 Zebra mbuna chromosome/scaffold end (bp)
## 2972 Query protein or transcript ID
## 2973 Last common ancestor with Zebra mbuna
## 2974 Zebra mbuna homology type
## 2975 %id. target Zebra mbuna gene identical to query gene
## 2976 %id. query gene identical to target Zebra mbuna gene
## 2977 Zebra mbuna Gene-order conservation score
## 2978 Zebra mbuna Whole-genome alignment coverage
## 2979 Zebra mbuna orthology confidence [0 low, 1 high]
## 2980 Zebrafish gene stable ID
## 2981 Zebrafish gene name
## 2982 Zebrafish protein or transcript stable ID
## 2983 Zebrafish chromosome/scaffold name
## 2984 Zebrafish chromosome/scaffold start (bp)
## 2985 Zebrafish chromosome/scaffold end (bp)
## 2986 Query protein or transcript ID
## 2987 Last common ancestor with Zebrafish
## 2988 Zebrafish homology type
## 2989 %id. target Zebrafish gene identical to query gene
## 2990 %id. query gene identical to target Zebrafish gene
## 2991 Zebrafish Gene-order conservation score
## 2992 Zebrafish Whole-genome alignment coverage
## 2993 Zebrafish orthology confidence [0 low, 1 high]
## 2994 Zig-zag eel gene stable ID
## 2995 Zig-zag eel gene name
## 2996 Zig-zag eel protein or transcript stable ID
## 2997 Zig-zag eel chromosome/scaffold name
## 2998 Zig-zag eel chromosome/scaffold start (bp)
## 2999 Zig-zag eel chromosome/scaffold end (bp)
## 3000 Query protein or transcript ID
## 3001 Last common ancestor with Zig-zag eel
## 3002 Zig-zag eel homology type
## 3003 %id. target Zig-zag eel gene identical to query gene
## 3004 %id. query gene identical to target Zig-zag eel gene
## 3005 Zig-zag eel Gene-order conservation score
## 3006 Zig-zag eel orthology confidence [0 low, 1 high]
## 3007 Human paralogue gene stable ID
## 3008 Human paralogue associated gene name
## 3009 Human paralogue protein or transcript ID
## 3010 Human paralogue chromosome/scaffold name
## 3011 Human paralogue chromosome/scaffold start (bp)
## 3012 Human paralogue chromosome/scaffold end (bp)
## 3013 Paralogue query protein or transcript ID
## 3014 Paralogue last common ancestor with Human
## 3015 Human paralogue homology type
## 3016 Paralogue %id. target Human gene identical to query gene
## 3017 Paralogue %id. query gene identical to target Human gene
## 3018 Gene stable ID
## 3019 Gene stable ID version
## 3020 Version (gene)
## 3021 Transcript stable ID
## 3022 Transcript stable ID version
## 3023 Version (transcript)
## 3024 Protein stable ID
## 3025 Protein stable ID version
## 3026 Version (protein)
## 3027 Chromosome/scaffold name
## 3028 Gene start (bp)
## 3029 Gene end (bp)
## 3030 Strand
## 3031 Karyotype band
## 3032 Gene name
## 3033 Source of gene name
## 3034 Transcript count
## 3035 Gene % GC content
## 3036 Gene description
## 3037 Variant name
## 3038 Variant source
## 3039 Variant source description
## 3040 Variant alleles
## 3041 Variant supporting evidence
## 3042 Mapweight
## 3043 Minor allele
## 3044 Minor allele frequency
## 3045 Minor allele count
## 3046 Clinical significance
## 3047 Transcript location (bp)
## 3048 Variant chromosome Strand
## 3049 Protein location (aa)
## 3050 chromosome/scaffold position start (bp)
## 3051 Chromosome/scaffold position end (bp)
## 3052 PolyPhen prediction
## 3053 PolyPhen score
## 3054 SIFT prediction
## 3055 SIFT score
## 3056 Distance to transcript
## 3057 CDS start
## 3058 CDS end
## 3059 Protein allele
## 3060 Variant consequence
## 3061 Consequence specific allele
## 3062 Gene stable ID
## 3063 Gene stable ID version
## 3064 Version (gene)
## 3065 Transcript stable ID
## 3066 Transcript stable ID version
## 3067 Version (transcript)
## 3068 Protein stable ID
## 3069 Protein stable ID version
## 3070 Version (protein)
## 3071 Chromosome/scaffold name
## 3072 Gene start (bp)
## 3073 Gene end (bp)
## 3074 Strand
## 3075 Karyotype band
## 3076 Gene name
## 3077 Source of gene name
## 3078 Transcript count
## 3079 Gene % GC content
## 3080 Gene description
## 3081 Variant name
## 3082 Variant source
## 3083 Variant source description
## 3084 Variant alleles
## 3085 Variant supporting evidence
## 3086 Mapweight
## 3087 Transcript location (bp)
## 3088 Variant chromosome/scaffold strand
## 3089 Protein location (aa)
## 3090 Chromosome/scaffold position start (bp)
## 3091 Chromosome/scaffold position end (bp)
## 3092 Distance to transcript
## 3093 CDS start
## 3094 CDS end
## 3095 Variant consequence
## 3096 Consequence specific allele
## 3097 Unspliced (Transcript)
## 3098 Unspliced (Gene)
## 3099 Flank (Transcript)
## 3100 Flank (Gene)
## 3101 Flank-coding region (Transcript)
## 3102 Flank-coding region (Gene)
## 3103 5' UTR
## 3104 3' UTR
## 3105 Exon sequences
## 3106 cDNA sequences
## 3107 Coding sequence
## 3108 Peptide
## 3109 upstream_flank
## 3110 downstream_flank
## 3111 Gene stable ID
## 3112 Gene stable ID version
## 3113 Gene description
## 3114 Gene name
## 3115 Source of gene name
## 3116 Chromosome/scaffold name
## 3117 Gene start (bp)
## 3118 Gene end (bp)
## 3119 Gene type
## 3120 Version (gene)
## 3121 UniParc ID
## 3122 UniProtKB/Swiss-Prot ID
## 3123 UniProtKB/TrEMBL ID
## 3124 CDS start (within cDNA)
## 3125 CDS end (within cDNA)
## 3126 5' UTR start
## 3127 5' UTR end
## 3128 3' UTR start
## 3129 3' UTR end
## 3130 Transcript stable ID
## 3131 Transcript stable ID version
## 3132 Protein stable ID
## 3133 Protein stable ID version
## 3134 Transcript type
## 3135 Version (transcript)
## 3136 Version (protein)
## 3137 Strand
## 3138 Transcript start (bp)
## 3139 Transcript end (bp)
## 3140 Transcription start site (TSS)
## 3141 Transcript length (including UTRs and CDS)
## 3142 CDS Length
## 3143 CDS start
## 3144 CDS end
## 3145 Exon stable ID
## 3146 Exon region start (bp)
## 3147 Exon region end (bp)
## 3148 Strand
## 3149 Exon rank in transcript
## 3150 Start phase
## 3151 End phase
## 3152 cDNA coding start
## 3153 cDNA coding end
## 3154 Genomic coding start
## 3155 Genomic coding end
## 3156 Constitutive exon
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## 202 structure
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## 239 structure
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## 241 structure
## 242 homologs
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## 2978 homologs
## 2979 homologs
## 2980 homologs
## 2981 homologs
## 2982 homologs
## 2983 homologs
## 2984 homologs
## 2985 homologs
## 2986 homologs
## 2987 homologs
## 2988 homologs
## 2989 homologs
## 2990 homologs
## 2991 homologs
## 2992 homologs
## 2993 homologs
## 2994 homologs
## 2995 homologs
## 2996 homologs
## 2997 homologs
## 2998 homologs
## 2999 homologs
## 3000 homologs
## 3001 homologs
## 3002 homologs
## 3003 homologs
## 3004 homologs
## 3005 homologs
## 3006 homologs
## 3007 homologs
## 3008 homologs
## 3009 homologs
## 3010 homologs
## 3011 homologs
## 3012 homologs
## 3013 homologs
## 3014 homologs
## 3015 homologs
## 3016 homologs
## 3017 homologs
## 3018 snp
## 3019 snp
## 3020 snp
## 3021 snp
## 3022 snp
## 3023 snp
## 3024 snp
## 3025 snp
## 3026 snp
## 3027 snp
## 3028 snp
## 3029 snp
## 3030 snp
## 3031 snp
## 3032 snp
## 3033 snp
## 3034 snp
## 3035 snp
## 3036 snp
## 3037 snp
## 3038 snp
## 3039 snp
## 3040 snp
## 3041 snp
## 3042 snp
## 3043 snp
## 3044 snp
## 3045 snp
## 3046 snp
## 3047 snp
## 3048 snp
## 3049 snp
## 3050 snp
## 3051 snp
## 3052 snp
## 3053 snp
## 3054 snp
## 3055 snp
## 3056 snp
## 3057 snp
## 3058 snp
## 3059 snp
## 3060 snp
## 3061 snp
## 3062 snp_somatic
## 3063 snp_somatic
## 3064 snp_somatic
## 3065 snp_somatic
## 3066 snp_somatic
## 3067 snp_somatic
## 3068 snp_somatic
## 3069 snp_somatic
## 3070 snp_somatic
## 3071 snp_somatic
## 3072 snp_somatic
## 3073 snp_somatic
## 3074 snp_somatic
## 3075 snp_somatic
## 3076 snp_somatic
## 3077 snp_somatic
## 3078 snp_somatic
## 3079 snp_somatic
## 3080 snp_somatic
## 3081 snp_somatic
## 3082 snp_somatic
## 3083 snp_somatic
## 3084 snp_somatic
## 3085 snp_somatic
## 3086 snp_somatic
## 3087 snp_somatic
## 3088 snp_somatic
## 3089 snp_somatic
## 3090 snp_somatic
## 3091 snp_somatic
## 3092 snp_somatic
## 3093 snp_somatic
## 3094 snp_somatic
## 3095 snp_somatic
## 3096 snp_somatic
## 3097 sequences
## 3098 sequences
## 3099 sequences
## 3100 sequences
## 3101 sequences
## 3102 sequences
## 3103 sequences
## 3104 sequences
## 3105 sequences
## 3106 sequences
## 3107 sequences
## 3108 sequences
## 3109 sequences
## 3110 sequences
## 3111 sequences
## 3112 sequences
## 3113 sequences
## 3114 sequences
## 3115 sequences
## 3116 sequences
## 3117 sequences
## 3118 sequences
## 3119 sequences
## 3120 sequences
## 3121 sequences
## 3122 sequences
## 3123 sequences
## 3124 sequences
## 3125 sequences
## 3126 sequences
## 3127 sequences
## 3128 sequences
## 3129 sequences
## 3130 sequences
## 3131 sequences
## 3132 sequences
## 3133 sequences
## 3134 sequences
## 3135 sequences
## 3136 sequences
## 3137 sequences
## 3138 sequences
## 3139 sequences
## 3140 sequences
## 3141 sequences
## 3142 sequences
## 3143 sequences
## 3144 sequences
## 3145 sequences
## 3146 sequences
## 3147 sequences
## 3148 sequences
## 3149 sequences
## 3150 sequences
## 3151 sequences
## 3152 sequences
## 3153 sequences
## 3154 sequences
## 3155 sequences
## 3156 sequencestx2gene <- getBM(attributes = c("ensembl_transcript_id_version", "hgnc_symbol"), mart = mart, useCache = FALSE)
head(tx2gene)## ensembl_transcript_id_version hgnc_symbol
## 1 ENST00000387314.1 MT-TF
## 2 ENST00000389680.2 MT-RNR1
## 3 ENST00000387342.1 MT-TV
## 4 ENST00000387347.2 MT-RNR2
## 5 ENST00000386347.1 MT-TL1
## 6 ENST00000361390.2 MT-ND1TXI object
txi <- tximport(files, type = "kallisto", tx2gene = tx2gene)
head(txi$counts)## D_CON1 D_CON2 D_CON3 D_TREAT1 D_TREAT2
## 320239.33685 279214.59791 310829.19263 3.660786e+05 3.268363e+05
## A1BG 79.16316 19.52848 16.26144 4.146486e+01 3.923610e+01
## A1CF 4.00000 0.00000 6.00253 4.006365e+00 4.031743e+00
## A2M 4126.00000 1005.00000 1374.00000 6.950000e+02 1.529000e+03
## A2ML1 17.93577 14.40054 13.08318 9.010019e+00 1.881112e+01
## A2MP1 7.00000 11.00000 2.00000 1.800000e+01 9.000000e+00
## D_TREAT3 H_CON1 H_CON2 H_CON3 H_CYTKN1
## 265697.16538 350090.2698 2.686039e+05 2.260295e+05 3.253813e+05
## A1BG 45.90271 56.5765 1.015497e+02 3.824340e+01 7.106578e+01
## A1CF 0.00000 1.0000 0.000000e+00 4.008713e+00 4.000000e+00
## A2M 2930.00000 3003.0000 8.760000e+02 5.580000e+02 6.465000e+03
## A2ML1 15.06801 16.6282 7.492394e+00 4.028411e+00 8.244331e+00
## A2MP1 4.00000 5.0000 3.000000e+00 1.000000e+01 1.000000e+01
## H_CYTKN2 H_CYTKN3 H_TREAT1 H_TREAT2 H_TREAT3
## 2.949614e+05 374090.09195 2.641537e+05 2.943063e+05 223570.33200
## A1BG 6.908696e+01 56.30732 6.004986e+01 4.121510e+01 61.27979
## A1CF 3.000659e+00 2.00000 7.009629e+00 1.009330e+00 0.00000
## A2M 3.740000e+02 1294.00000 1.070000e+02 1.854000e+03 102.00000
## A2ML1 5.297068e+00 12.00922 8.069787e+00 8.022131e+00 18.58668
## A2MP1 1.000000e+00 10.00000 3.000000e+00 1.300000e+01 3.00000Beware DDS object
dds <- DESeqDataSetFromTximport(txi, colData = samples, design = ~ replicate + condition )Start to change case by case Relevel
dds$condition <- relevel(dds$condition, ref = "healthy_control")
dds <- DESeq(dds)
resultsNames(dds)## [1] "Intercept"
## [2] "replicate_2_vs_1"
## [3] "replicate_3_vs_1"
## [4] "condition_disease_control_vs_healthy_control"
## [5] "condition_disease_treatment_vs_healthy_control"
## [6] "condition_healthy_cytokine_vs_healthy_control"
## [7] "condition_healthy_treatment_vs_healthy_control"extract counts
counts <- counts(dds, normalized=TRUE)transform counts
## DESeq2 is weird about extracting transformations as a matrix - you must use `assay()`
log2 <- assay(normTransform(dds))
rld <- assay(rlog(dds))## x-axis is the transformed mean not the raw mean..
log2_plt <- meanSdPlot(log2, ranks=FALSE, plot=FALSE)
log2_plt$gg + ggtitle("Log2 + PC Transformation") + xlim(0,20)
rld_plt <- meanSdPlot(rld, ranks=FALSE, plot=FALSE)
rld_plt$gg + ggtitle("Rlog Transformation") + xlim(0,20)
Sample heatmap
rld <- assay(rlog(dds))
sampleDists <- dist(t(rld))
## Place distances in matrix
sampleDistMatrix <- as.matrix(sampleDists)
## Optional, remove colnames
colnames(sampleDistMatrix) <- NULL
## create annotation dataframe
ann <- data.frame(Condition = samples$condition)
col <- c("blue", "red1")
names(col) <- c("treatment", "control")
ann_col <- list(Condition = col)
## match annotation rownames to distance mat
rownames(ann) <- rownames(sampleDistMatrix)
pheatmap(mat=sampleDistMatrix,
## pass distance metric calculated to heatmap
clustering_distance_rows=sampleDists,
clustering_distance_cols=sampleDists,
## pass annotation dataframe
## add colors
#annotation_colors = ann_col,
## heatmap colours
col=hcl.colors(100,"GnBu",rev=T))
PCA
p <- pca(rld, metadata = samples)
biplot(p,
colby = 'condition',
colkey = c('healthy_treatment'='royalblue', 'healthy_control'='red1',
'healthy_cytokine' = 'forestgreen', 'disease_control' = 'purple',
'disease_treatment' = 'gold'),
ellipse = T,
hline = 0,
vline = 0,
legendPosition = 'right',
legendLabSize = 12,
legendIconSize = 8.0,
title = 'PCA bi-plot',
subtitle = 'PC1 versus PC2')
DESeq
# make healthy_cytokine vs healthy_control
h_con_v_h_cyto <- results(dds, filterFun=ihw, alpha=0.05,pAdjustMethod ='BH', c("condition", "healthy_cytokine", "healthy_control"))
summary(h_con_v_h_cyto)##
## out of 23094 with nonzero total read count
## adjusted p-value < 0.05
## LFC > 0 (up) : 1764, 7.6%
## LFC < 0 (down) : 1373, 5.9%
## outliers [1] : 0, 0%
## [1] see 'cooksCutoff' argument of ?results
## see metadata(res)$ihwResult on hypothesis weightingres1 <- lfcShrink(dds=dds, res=h_con_v_h_cyto, coef=6, type="apeglm")
summary(res1)##
## out of 23094 with nonzero total read count
## adjusted p-value < 0.05
## LFC > 0 (up) : 1764, 7.6%
## LFC < 0 (down) : 1373, 5.9%
## outliers [1] : 0, 0%
## [1] see 'cooksCutoff' argument of ?results
## see metadata(res)$ihwResult on hypothesis weightingfunction
#resdf<- as.data.frame(res)
get_upregulated <- function(df){
key <- intersect(rownames(df)[which(df$log2FoldChange>=1)], rownames(df)[which(df$padj<=0.05)])
results <- as.data.frame((df)[which(rownames(df) %in% key),])
return(results)
}
get_downregulated <- function(df){
key <- intersect(rownames(df)[which(df$log2FoldChange<=-1)],rownames(df)[which(df$padj<=0.05)])
results <- as.data.frame((df)[which(rownames(df) %in% key),])
return(results)
}
de_up <- get_upregulated(as.data.frame(res1))
de_up## baseMean log2FoldChange lfcSE pvalue padj
## ABCA1 4.650326e+02 2.276044 0.4660556 4.080967e-08 1.529277e-06
## ABL1 6.655701e+03 1.160539 0.1686530 4.515174e-13 3.598308e-11
## ACO1 5.636925e+03 1.468141 0.1256035 1.186891e-32 7.002231e-30
## ACSL4 3.137373e+03 1.161492 0.3424450 3.609074e-05 5.061742e-04
## ADAM28 4.356398e+01 1.054643 0.9748620 7.668585e-03 3.568933e-02
## ADAMTS1 2.720092e+04 1.220355 0.5234274 8.919441e-04 5.694897e-03
## ADAMTS6 2.929875e+02 1.710356 0.6030130 1.369170e-04 1.731944e-03
## ADM 2.833821e+03 1.428694 0.2976183 8.812256e-08 2.915090e-06
## ADORA2A 7.133919e+01 2.684819 0.3718029 2.268519e-14 3.493971e-12
## AFP 3.647333e+01 2.574054 0.5468393 1.131794e-07 3.289252e-06
## AKR1B1 8.299065e+03 2.615382 0.1972541 1.091626e-41 2.240890e-38
## AKR1C1 6.201265e+03 3.160914 0.5694378 6.751833e-10 3.156608e-08
## AKR1C2 3.337844e+03 2.504152 0.5444392 7.392330e-08 2.427718e-06
## AKR1C3 8.055705e+02 1.435340 0.5445224 3.010543e-04 2.991007e-03
## AMPD3 8.624474e+02 1.063115 0.2941902 2.468059e-05 3.569613e-04
## AMPH 5.546650e+02 2.048781 0.3977750 1.143369e-08 4.933402e-07
## ANGPT1 1.246138e+03 1.678147 0.3151492 5.097469e-09 2.366670e-07
## ANGPTL4 4.469447e+02 1.488122 0.3519777 1.087481e-06 2.867835e-05
## ANO9 3.213292e+01 2.814630 1.5157907 8.815396e-04 6.752759e-03
## ARHGAP24 2.262061e+02 1.015431 0.4080003 8.059223e-04 8.194547e-03
## ARRDC3 1.364293e+03 1.283630 0.4292531 1.066529e-04 1.218908e-03
## ASAH2 4.215038e+01 1.381979 0.6851600 1.668255e-03 1.356163e-02
## ATP8B4 3.687810e+01 2.542212 0.5784458 5.165966e-07 1.260459e-05
## BASP1 3.549104e+03 1.146532 0.2596612 8.012599e-07 1.846862e-05
## BATF 1.599800e+01 1.203985 1.4072554 6.617249e-03 4.928438e-02
## BCL2A1 6.362805e+01 5.593233 1.0408408 1.192158e-09 7.140627e-08
## BDNF 9.013505e+02 3.467979 0.4864835 1.293803e-14 1.735941e-12
## BID 9.809329e+02 2.007908 0.1606726 4.342153e-37 7.557843e-34
## BIRC3 9.396073e+02 1.817804 0.3435916 5.608836e-09 2.895410e-07
## BMP2 3.509065e+02 2.953066 0.6228562 3.481473e-08 1.455709e-06
## BMP6 6.873867e+02 2.031781 0.3258368 2.486470e-11 2.042104e-09
## BNIP3 4.089910e+03 1.082938 0.3184158 3.899369e-05 4.248846e-04
## BRINP2 1.301127e+01 2.365199 1.0937774 1.082141e-03 1.188504e-02
## BST2 1.842749e+01 2.019894 1.6001487 3.022869e-03 2.522409e-02
## C10orf90 8.215803e+01 1.213120 0.3087706 6.169842e-06 1.321267e-04
## C11orf96 1.049779e+03 1.632942 0.5705351 1.787587e-04 1.936189e-03
## C15orf48 3.569027e+02 9.925556 0.9627993 9.293877e-25 4.832101e-22
## C1orf53 4.496728e+01 1.231393 0.3236223 1.046646e-05 2.070513e-04
## C1QTNF1 3.351862e+03 2.882125 0.2562107 3.764796e-31 2.129641e-28
## C2CD4A 2.250980e+01 3.209395 0.9080476 4.871428e-06 1.397651e-04
## C2CD4B 1.299342e+01 8.514112 2.8903616 4.327887e-07 1.604328e-05
## C3 2.380020e+04 3.972832 0.3852386 1.962403e-26 5.844584e-24
## CA12 1.579642e+04 1.766609 0.6149719 1.486958e-04 1.311672e-03
## CA9 2.395215e+02 4.003972 0.8653765 8.563682e-09 4.099859e-07
## CABLES1 2.557544e+03 3.352638 0.4089590 2.821554e-18 5.853555e-16
## CCL2 6.948155e+03 4.906176 0.4119234 5.446453e-35 4.929453e-32
## CCL20 1.120427e+02 6.553882 0.9074407 4.737632e-14 1.060797e-11
## CCL5 4.281536e+01 2.882088 0.8003010 7.753401e-06 1.321267e-04
## CCL7 7.829765e+01 4.012090 0.9489262 2.079563e-07 7.188965e-06
## CCN6 1.340583e+03 1.543086 0.1791270 3.645201e-19 9.358000e-17
## CCR7 1.218668e+02 1.399034 0.4131390 3.866871e-05 6.803503e-04
## CD274 5.963699e+01 1.765940 0.7243918 3.448274e-04 3.847575e-03
## CD38 8.089254e+01 2.029369 0.6125662 4.136092e-05 6.297958e-04
## CD55 9.052822e+03 2.130531 0.4116630 1.050683e-08 3.897355e-07
## CD82 3.386489e+03 1.167447 0.4049581 1.889085e-04 1.638324e-03
## CD83 4.247097e+02 2.899131 0.5674363 5.461308e-09 3.310865e-07
## CDH6 3.298643e+02 1.120643 0.6611049 2.959005e-03 2.092386e-02
## CDKN2B 8.206290e+02 1.684023 0.2535194 1.743866e-12 1.817327e-10
## CEMIP2 7.787046e+02 1.027237 0.3316445 1.477828e-04 1.592737e-03
## CFB 2.538986e+04 4.066095 0.3347143 3.072045e-36 4.170650e-33
## CFH 9.729428e+03 1.224133 0.2806091 9.736690e-07 1.737929e-05
## CH25H 8.462035e+02 3.109195 0.4079013 8.393514e-16 1.473195e-13
## CHEK2 6.813766e+02 1.112820 0.2657027 2.297430e-06 5.157472e-05
## CHI3L2 1.588192e+03 1.885264 0.5088437 5.758170e-06 1.206835e-04
## CHMP1B 4.889547e+03 1.686867 0.2147426 2.194260e-16 3.124738e-14
## CHRDL2 1.042835e+03 5.443001 0.4913667 7.070423e-30 4.612111e-27
## CHST7 1.414639e+02 1.614188 0.4299934 8.150417e-06 1.665836e-04
## CLDN1 2.382394e+03 2.433112 0.4015088 4.039948e-11 2.636870e-09
## CMIP 2.073590e+03 1.007849 0.2956176 4.701586e-05 6.971286e-04
## COL18A1 1.027271e+04 1.444934 0.9455614 2.376014e-03 1.373938e-02
## COL3A1 1.347453e+05 1.454210 0.1617644 1.715147e-20 3.663685e-18
## COL4A1 6.671747e+03 1.453020 0.4388341 4.268453e-05 4.582409e-04
## COL4A2 1.245026e+04 1.149191 0.3623390 9.736457e-05 1.024871e-03
## COL4A3 6.727366e+01 1.843122 0.7066560 2.585435e-04 2.412288e-03
## COL4A4 1.281629e+02 3.086995 0.5172637 8.785306e-11 7.352196e-09
## COL7A1 7.256604e+03 2.329836 0.3591988 3.462488e-12 2.584193e-10
## CPXM1 1.864665e+02 4.696889 1.9412147 5.424727e-05 7.862948e-04
## CSF1 1.671788e+04 2.380784 0.2832104 2.292038e-18 3.680027e-16
## CSF2 8.341368e+01 8.189383 1.1567609 1.931491e-13 2.071382e-11
## CSF3 7.013287e+01 8.170180 1.4631797 2.000913e-10 1.168794e-08
## CSGALNACT1 3.914490e+03 1.975951 0.4309129 1.495026e-07 4.336898e-06
## CSPG4BP 4.149249e+01 2.142682 0.4901678 5.469232e-07 1.640792e-05
## CTSS 5.541577e+02 3.890583 0.3493298 3.059666e-31 2.008974e-28
## CXCL1 3.271157e+04 7.907546 0.9130081 1.632773e-21 4.346423e-19
## CXCL10 1.258279e+01 7.850994 2.7809202 4.449373e-07 1.640792e-05
## CXCL2 2.029081e+03 6.948940 0.4326570 1.953808e-60 1.623635e-56
## CXCL3 3.229667e+03 8.611662 0.7174166 8.244308e-35 6.265228e-32
## CXCL5 3.484832e+03 10.428798 0.9135591 4.254669e-36 4.792012e-33
## CXCL6 2.890303e+04 11.159461 0.9715438 8.596883e-35 6.265228e-32
## CXCL8 2.618590e+04 10.162949 0.9061936 7.181194e-36 6.533708e-33
## CXXC4 1.808296e+01 3.463219 1.3571264 1.341065e-04 2.072722e-03
## CYP24A1 3.947167e+02 7.791313 1.1058829 2.069763e-15 4.128206e-13
## CYP7B1 1.045516e+03 1.614649 0.3148925 1.377678e-08 6.275655e-07
## CYTL1 9.879906e+02 2.961284 0.4991673 5.062139e-11 3.036556e-09
## DAAM1 9.437220e+02 1.159194 0.2372182 7.363813e-08 2.514763e-06
## DAW1 1.464634e+02 2.179103 0.5621666 4.148430e-06 9.293685e-05
## DCLK1 8.608750e+03 1.285103 0.5054369 4.781096e-04 3.838806e-03
## DENND2A 8.579489e+02 2.323267 0.4972123 1.029709e-07 3.339116e-06
## DNER 6.458797e+02 2.386771 0.3080637 2.733930e-16 4.751861e-14
## DOCK4 2.863928e+02 1.304475 0.9908085 4.536696e-03 2.819626e-02
## DOK6 4.621387e+02 1.074718 0.4477316 9.695770e-04 8.114456e-03
## DRAM1 3.023546e+03 1.848709 0.2191986 1.823549e-18 3.680027e-16
## DSEL 2.316466e+03 1.193843 0.2278407 1.428064e-08 5.040634e-07
## DUSP1 7.994170e+03 1.212798 0.1610189 4.130814e-15 4.939651e-13
## DUSP16 7.548480e+02 1.429902 0.1706462 3.422839e-18 6.712910e-16
## DUSP4 1.202225e+03 1.059275 0.4565197 1.027998e-03 8.737817e-03
## DUSP5 1.663533e+03 1.023735 0.2742908 1.607484e-05 2.897692e-04
## EDN1 5.928949e+02 1.567095 0.4398385 1.678552e-05 2.767370e-04
## EDNRA 3.346001e+02 1.441827 0.5512528 3.532205e-04 3.752964e-03
## EDNRB 5.947454e+02 5.958515 0.6488891 2.088324e-22 7.101642e-20
## EFEMP1 3.262615e+04 1.372039 0.5091105 3.222683e-04 2.399512e-03
## EGLN3 4.680327e+01 2.295834 0.7156171 3.757441e-05 6.722620e-04
## ELF3 1.438634e+02 4.880101 0.7482806 3.368941e-13 4.092605e-11
## ELOVL2 1.972175e+02 1.196167 0.6813305 3.000602e-03 2.338465e-02
## ELOVL3 6.688574e+01 2.463906 0.5241836 1.123131e-07 3.948542e-06
## EPAS1 1.352362e+04 1.668289 0.1616268 3.505542e-26 1.321992e-23
## EPG5 6.165439e+03 1.226277 0.1675625 2.090804e-14 2.075224e-12
## EPHB2 6.284995e+02 1.152278 0.3205884 1.914231e-05 3.366866e-04
## EPSTI1 3.813292e+02 1.116156 0.4136046 4.531330e-04 5.559747e-03
## ETV4 1.226479e+02 1.645119 0.6427106 3.213273e-04 3.929901e-03
## F3 1.209966e+02 2.170231 0.4030660 1.890017e-09 1.698333e-07
## F5 6.645194e+01 2.711591 1.1985841 3.407023e-04 3.629434e-03
## FAM107B 2.009606e+03 1.662188 0.2888911 4.072000e-10 2.565463e-08
## FAM124A 3.063774e+02 1.130248 0.3176520 2.314857e-05 4.548821e-04
## FAM167A 2.242161e+02 1.722548 0.3901769 4.326022e-07 1.474554e-05
## FAM20A 1.695402e+02 1.012609 0.7745486 7.033533e-03 4.413938e-02
## FBN2 7.401716e+03 2.403073 0.3328817 1.366125e-14 1.330884e-12
## FBXW10B 1.134454e+02 1.607213 0.3887354 1.978999e-06 5.356416e-05
## FCAMR 1.048814e+01 7.036031 2.7855799 1.382114e-05 5.055198e-04
## FGF10 4.450264e+02 2.883485 0.7653613 3.268645e-06 7.538085e-05
## FGF11 2.656711e+02 1.708681 0.5909880 1.582953e-04 1.912880e-03
## FGF7 3.056951e+03 1.291975 0.3401144 9.166722e-06 1.545314e-04
## FGFBP1 1.082116e+03 2.650437 1.4209102 8.023996e-04 7.217507e-03
## FIBIN 3.526017e+02 2.430143 0.5433986 1.540340e-07 6.445540e-06
## FILIP1L 4.312409e+02 2.619978 0.5316456 3.568290e-08 1.455709e-06
## FLVCR2 2.152670e+02 1.005714 0.2660343 1.386131e-05 2.867781e-04
## FOXF1 2.784774e+03 1.601848 0.1668192 4.308613e-23 1.241406e-20
## FTH1 1.222299e+05 1.199643 0.2094676 7.999828e-10 3.992896e-08
## G0S2 5.448726e+02 3.651762 0.5147125 9.886361e-15 1.431962e-12
## GABARAPL1 3.974026e+03 1.409178 0.2237985 2.041120e-11 1.295880e-09
## GABBR2 7.206285e+01 2.816417 0.4976570 5.234195e-10 2.653215e-08
## GALNT2 1.343835e+04 1.071895 0.1704638 2.709874e-11 1.830329e-09
## GAS6 2.725026e+04 1.132790 0.4511261 6.383884e-04 4.802004e-03
## GCH1 4.664982e+02 2.882625 0.4214132 2.382292e-13 2.725518e-11
## GFRA2 1.120110e+02 4.656560 0.7890475 3.552448e-11 3.202222e-09
## GGT1 1.494448e+02 1.603210 0.2419709 2.110115e-12 3.431054e-10
## GGT5 5.338298e+02 1.189799 0.6786768 3.238006e-03 2.237486e-02
## GGTLC4P 3.504158e+01 1.915129 0.6995543 1.980288e-04 2.003208e-03
## GJB2 2.093577e+01 4.956773 1.2290809 1.872673e-06 6.025900e-05
## GK 4.306643e+02 1.666420 0.3491639 8.364841e-08 3.148429e-06
## GLIPR2 7.561425e+02 1.880504 0.3256781 3.924675e-10 2.268698e-08
## GLP2R 6.742843e+01 2.284664 0.6274295 7.365464e-06 1.682156e-04
## GNA14 1.697994e+02 2.749893 0.5577202 1.054597e-08 5.138992e-07
## GNG11 1.340150e+03 1.850969 0.3108603 1.146195e-10 7.352196e-09
## GOLGA8F 2.633479e+01 2.709819 1.1799652 2.478914e-04 5.538380e-03
## GPC4 1.499874e+03 2.011327 0.6004305 2.847127e-05 3.655311e-04
## GPR37L1 3.453219e+01 3.649666 0.5251710 1.548376e-13 2.305721e-11
## GPR39 8.080865e+01 1.143867 0.5041864 1.145264e-03 8.052577e-03
## GPRC5A 9.601787e+02 1.280662 0.4345385 1.393441e-04 1.756178e-03
## GRIP2 1.438888e+02 1.461902 1.3368009 3.817555e-03 2.474719e-02
## GRK5 1.405026e+03 1.067309 0.2767279 8.453544e-06 1.668100e-04
## GTF2IP4 5.260012e+03 1.647967 0.1582164 1.363242e-26 4.377624e-24
## H2AC19 5.378053e+02 1.507735 0.2971823 2.316281e-08 9.637633e-07
## H2BC21 4.407631e+02 1.271251 0.3264378 6.714943e-06 1.656585e-04
## H4C12 2.639236e+01 1.391027 0.6225115 1.140527e-03 1.239939e-02
## HAS3 2.043076e+02 2.898180 0.4359266 7.205918e-13 1.261814e-10
## HCK 1.030665e+01 4.187152 1.6261798 2.831405e-04 4.169596e-03
## HDAC4 2.550444e+03 1.634355 0.2157827 2.340705e-15 3.209872e-13
## HERC4 5.373708e+03 1.099595 0.2214075 4.529255e-08 1.529277e-06
## HGD 1.864532e+01 2.872361 0.9558806 7.570200e-05 2.090381e-03
## HMGN2P46 3.513501e+01 1.293683 0.5404803 7.635157e-04 7.248663e-03
## HPD 1.153008e+03 3.729677 0.5084722 7.865967e-15 1.210154e-12
## HSD11B1 5.406855e+02 6.002738 1.2574159 6.914809e-09 3.472818e-07
## HSD17B2 3.658485e+02 4.028344 0.6364539 7.450539e-12 6.788542e-10
## ICAM1 1.404166e+03 1.916143 0.5803121 4.224052e-05 6.533569e-04
## ICOSLG 2.246760e+02 1.783199 0.2539191 1.217263e-13 1.852168e-11
## IER3 3.974853e+03 2.725453 0.3177324 2.446048e-19 5.271094e-17
## IFI44L 4.643904e+01 2.271758 0.5939790 4.580389e-06 1.128508e-04
## IFI6 1.531008e+03 2.571188 0.6082582 9.543393e-07 2.288055e-05
## IGFBP4 8.839961e+04 1.715470 0.1436407 3.944493e-34 2.818473e-31
## IL11 3.345930e+03 3.995213 0.7877209 6.603719e-09 2.810439e-07
## IL15 3.760513e+02 1.929880 0.3508625 1.889321e-09 1.273077e-07
## IL15RA 3.487588e+02 1.647649 0.2021605 2.263444e-17 4.965878e-15
## IL23A 4.357754e+01 2.526227 0.7107010 7.160926e-06 1.426706e-04
## IL33 5.898826e+01 2.919950 0.6183916 9.812123e-08 3.671613e-06
## IL4I1 5.948345e+01 2.405653 0.9700168 3.084892e-04 3.507917e-03
## IL6 4.809050e+03 9.322718 0.5341973 2.379561e-74 3.230524e-70
## IL7 3.305351e+01 1.639528 0.5079680 5.671347e-05 7.103914e-04
## IL7R 1.527480e+03 2.115711 0.6241675 1.684961e-05 2.696108e-04
## INHBA 8.702523e+03 1.667773 0.2926606 7.228055e-10 2.909077e-08
## INSL4 1.754594e+01 3.207829 0.7793701 1.305195e-06 4.085370e-05
## IRAK2 5.482919e+02 2.085001 0.3022745 1.610514e-13 1.930287e-11
## IRS1 3.161197e+03 1.225815 0.2073812 2.284762e-10 1.194147e-08
## ITPRIP 7.296838e+02 1.012360 0.5571316 3.578907e-03 2.193829e-02
## JUP 9.892245e+02 1.347839 0.3335794 3.335485e-06 6.344986e-05
## KCNE4 1.734089e+03 1.299845 0.3189655 2.862305e-06 6.472398e-05
## KCNJ2 1.633478e+02 2.507245 0.8199799 5.204348e-05 7.980106e-04
## KIAA1217 1.264124e+03 1.802127 0.3212824 1.006565e-09 5.799984e-08
## KIFC3 4.787184e+03 1.031047 0.1920667 7.012377e-09 2.327926e-07
## KITLG 4.139298e+02 1.066815 0.5272463 1.765442e-03 1.354877e-02
## KLF9 2.014527e+03 1.668228 0.2382253 1.585795e-13 2.021783e-11
## KLHL13 4.800427e+03 1.666913 0.2816783 1.746196e-10 8.325338e-09
## KRT7 2.424483e+03 1.735356 0.3338413 1.227540e-08 4.802666e-07
## KRT81 6.024806e+01 1.428776 0.4568903 9.397372e-05 1.438101e-03
## KRT87P 1.239670e+02 1.301992 0.5225192 6.047123e-04 6.498029e-03
## KSR1 1.328510e+03 1.030909 0.2731952 1.201784e-05 2.024884e-04
## KYNU 1.629466e+02 2.524111 0.6262440 1.618985e-06 4.518899e-05
## LACC1 4.227413e+02 1.125650 0.2506633 5.300434e-07 1.601291e-05
## LAMA4 6.852766e+03 1.388873 0.2910570 1.016998e-07 2.883258e-06
## LAMB3 1.176525e+03 1.942978 0.4509714 5.152012e-07 1.522439e-05
## LAMC2 4.308904e+02 1.912673 0.3516134 2.682755e-09 1.494967e-07
## LCN2 1.966068e+02 6.370909 0.7266167 6.747516e-21 2.078503e-18
## LCTL 3.146225e+02 1.258772 0.4883221 4.817129e-04 5.821119e-03
## LDHA 2.880104e+04 1.430058 0.1858958 7.442459e-16 1.074892e-13
## LGALS9 3.423484e+01 2.063940 0.7307280 1.172330e-04 1.725991e-03
## LIF 3.132717e+03 2.835136 0.5824283 1.438718e-08 5.868876e-07
## LIPG 8.334053e+01 1.256168 0.6092965 1.687152e-03 1.138066e-02
## LRIG1 3.999244e+03 2.071473 0.2226711 7.022395e-22 1.801946e-19
## LRMDA 2.572707e+02 1.045390 0.3329837 1.154969e-04 1.743846e-03
## LRP8 2.214124e+03 1.373195 0.3484651 4.426887e-06 8.164587e-05
## LRRC55 9.927339e+00 1.683481 0.8675189 1.868179e-03 1.751038e-02
## LRRN3 5.391866e+01 1.913899 0.6732563 1.636274e-04 1.710680e-03
## LSAMP 1.803213e+03 1.238135 0.4286067 2.171309e-04 2.544966e-03
## LTBP1 6.913819e+03 1.372648 0.5456465 3.534664e-04 2.979035e-03
## LYPD1 4.333666e+02 5.900929 0.6432980 1.552750e-22 7.101642e-20
## LYPD3 1.440618e+02 2.326839 0.6816693 1.574850e-05 3.186527e-04
## MAFF 1.721684e+03 1.063845 0.2624120 4.094144e-06 8.929862e-05
## MAN1A1 7.336989e+03 1.993396 0.2564514 3.073280e-16 4.253143e-14
## MAOA 6.815110e+02 1.754459 0.3975284 5.300670e-07 1.390261e-05
## MAOB 1.022122e+03 1.854681 0.4282684 3.505538e-07 1.079786e-05
## MARCKSL1 4.463194e+02 1.631497 0.5117494 5.851043e-05 8.146690e-04
## MARCOL 5.277563e+01 10.140717 2.6212649 7.801406e-13 6.847449e-11
## MCC 9.589412e+02 1.338591 0.2409469 1.800706e-09 8.957547e-08
## MCTP1 1.737597e+01 2.035298 0.7639431 2.334338e-04 3.315256e-03
## MEDAG 1.529808e+03 1.841660 0.6383846 1.252701e-04 1.444124e-03
## MEGF10 1.569519e+02 1.088439 0.6145619 2.921618e-03 2.122939e-02
## MFF 5.697570e+03 1.367464 0.1682242 2.345377e-17 3.414254e-15
## MFSD2A 1.332217e+02 1.315719 0.4251837 9.244342e-05 1.398772e-03
## MGAT4A 4.401022e+02 2.021309 0.4900311 1.198411e-06 3.093237e-05
## MIF 5.907858e+03 1.283920 0.2668766 8.397098e-08 2.193296e-06
## MMP1 9.645530e+01 5.466399 0.9588717 3.364748e-10 2.182057e-08
## MMP10 1.502537e+01 5.309777 1.1659673 1.718236e-07 7.895386e-06
## MMP12 6.116220e+01 8.201897 1.3366246 6.861668e-11 5.380243e-09
## MMP3 3.277639e+04 7.840096 1.0395395 3.471975e-17 6.121560e-15
## MPHOSPH6 5.431411e+02 1.393224 0.2188273 1.378135e-11 1.036310e-09
## MPP4 3.332593e+02 2.341967 0.4896512 5.747921e-08 2.656066e-06
## MREG 1.371929e+02 1.053075 0.5571754 2.424574e-03 2.595288e-02
## MT1E 1.954081e+03 1.683910 0.2656836 1.039517e-11 8.173577e-10
## MT1F 9.334288e+01 2.546756 0.5954917 3.126065e-07 9.729345e-06
## MT1G 3.075014e+01 4.439108 1.5720702 3.618986e-05 4.635572e-04
## MT1X 2.437614e+03 2.369157 0.2206100 2.547395e-28 9.588139e-26
## MT2A 1.164163e+04 2.386387 0.4025918 9.019662e-11 5.515863e-09
## MTFP1 1.060145e+02 1.552801 0.4744426 3.918439e-05 6.317193e-04
## MTHFD2L 2.325835e+02 1.347900 0.2515784 5.535854e-09 3.229781e-07
## MYPN 8.617055e+02 2.399360 0.5263285 2.041840e-07 6.117365e-06
## NAMPT 5.596389e+03 2.501056 0.2565850 3.354120e-24 1.007610e-21
## NCCRP1 3.130019e+01 1.976474 0.5640755 1.945316e-05 2.774361e-04
## NCOA7 1.114374e+03 1.043428 0.2949189 3.043238e-05 4.418411e-04
## NDUFV2 1.818516e+03 1.326281 0.2099662 1.252029e-11 1.083802e-09
## NFKB2 3.501599e+03 1.900402 0.1734726 3.158096e-29 1.649029e-26
## NFKBIA 3.654283e+03 2.237790 0.1835986 1.987631e-35 2.061755e-32
## NFKBIZ 1.576020e+03 2.452451 0.1978340 1.058282e-36 1.637351e-33
## NID2 1.594577e+03 1.922505 0.4426020 4.755559e-07 1.400006e-05
## NKX3-1 5.495773e+02 1.397172 0.4995001 1.908260e-04 2.290737e-03
## NNMT 1.132891e+04 1.334941 0.1961638 6.869171e-13 5.750259e-11
## NOD2 7.918600e+01 2.237308 1.0603418 4.269659e-04 3.808073e-03
## NOS2 5.704347e+02 6.139083 1.1884965 3.015939e-10 1.902347e-08
## NR4A2 2.530190e+02 2.448688 0.4449376 1.136519e-09 6.831084e-08
## NR4A3 3.175417e+02 3.364720 0.3764117 1.228424e-20 3.593465e-18
## NRG2 1.507367e+02 1.066922 0.5526224 2.455959e-03 1.764982e-02
## NRP2 6.029579e+03 1.627472 0.2786259 2.550022e-10 1.179713e-08
## NUAK2 7.499994e+02 1.987408 0.1840507 2.149615e-28 1.015899e-25
## OASL 4.019776e+01 1.695652 0.7148200 5.068589e-04 4.351271e-03
## OLR1 6.038369e+01 1.501585 0.5260737 1.693961e-04 2.028545e-03
## OSGIN2 1.202661e+03 1.516521 0.1939634 3.779906e-16 5.721051e-14
## OSMR 6.122740e+03 1.095230 0.1993904 2.835535e-09 1.049439e-07
## OSTM1 1.647410e+03 1.109022 0.1190322 1.058517e-21 2.947884e-19
## P4HA3 4.665250e+02 2.436701 0.4834768 1.655085e-08 7.174367e-07
## PALMD 6.404520e+02 1.028956 0.3339404 1.430655e-04 1.655589e-03
## PAPPA 1.160769e+04 2.624736 0.4452841 1.141366e-10 5.383520e-09
## PCK1 5.946336e+01 4.668777 1.1854566 1.680082e-07 4.834922e-06
## PCSK9 6.904081e+02 1.003703 0.3169616 1.120093e-04 1.465968e-03
## PDCD1LG2 3.547222e+02 1.852459 0.3475267 3.193966e-09 1.806447e-07
## PDE10A 1.226443e+03 3.656725 0.4300484 1.577219e-19 4.148534e-17
## PDE4B 2.673019e+03 3.346093 0.2957760 2.848211e-31 1.880091e-28
## PDE4D 7.869721e+02 2.309069 0.4896669 6.573608e-08 2.005027e-06
## PDE7B 1.858860e+02 1.180589 0.6106942 1.728278e-03 1.334817e-02
## PDE8B 1.327958e+02 1.581666 0.4801541 4.301801e-05 7.397959e-04
## PDK1 8.446859e+02 1.310899 0.2976960 5.689124e-07 1.319812e-05
## PDK4 5.691871e+02 2.317060 0.5135669 3.024656e-07 9.098952e-06
## PDZK1IP1 1.160546e+02 3.316962 0.5700831 8.415262e-11 7.095134e-09
## PEDS1-UBE2V1 1.997400e+02 1.011108 0.3474805 2.604051e-04 3.321240e-03
## PF4V1 3.282606e+02 4.845650 1.2401494 1.396595e-06 4.271305e-05
## PFKFB4 4.742586e+02 1.749857 0.3029473 3.067028e-10 1.932814e-08
## PFKP 4.667209e+03 1.110696 0.4142175 3.428483e-04 2.888368e-03
## PGK1 1.533223e+04 1.247817 0.2451267 2.147169e-08 7.942852e-07
## PGM2L1 3.686412e+02 1.087259 0.7353630 4.850645e-03 3.030337e-02
## PHF10 2.568060e+03 1.164649 0.1679299 2.858152e-13 2.948046e-11
## PHLDA1 1.841782e+03 1.628335 0.5129140 4.692316e-05 6.971286e-04
## PI3 2.332024e+02 5.833968 0.4828267 6.068395e-36 8.894712e-33
## PID1 2.104074e+03 2.063935 0.3256689 7.262007e-12 6.631655e-10
## PIK3R3 4.714008e+02 1.019994 0.3676408 3.686608e-04 3.771146e-03
## PILRA 4.601459e+01 2.027599 0.4319040 1.644046e-07 4.761163e-06
## PITPNC1 7.832392e+01 1.070712 0.4802027 1.258241e-03 1.187605e-02
## PKNOX2 5.318052e+02 1.089401 0.1899570 8.358328e-10 4.305591e-08
## PLA2G4A 1.359666e+03 1.694465 0.2971294 5.693910e-10 3.026161e-08
## PLAT 3.684406e+02 1.808675 0.6060405 5.395158e-05 9.639406e-04
## PLD1 3.823524e+02 1.002769 0.2351822 1.739740e-06 4.271305e-05
## PLOD2 1.548796e+04 2.128700 0.2913853 7.535604e-15 8.839479e-13
## PLPPR4 1.140937e+02 1.599245 0.5401548 1.008335e-04 1.320447e-03
## PLXNA4 2.576328e+03 4.173224 0.3977361 1.580546e-27 5.408198e-25
## POM121L15P 4.597193e+02 2.170958 0.5352940 1.377104e-06 3.489642e-05
## POM121L4P 1.171678e+01 1.591372 0.8477145 1.744618e-03 1.654404e-02
## POM121L7P 2.540712e+01 1.660262 0.8772048 1.646567e-03 2.477886e-02
## POM121L9P 7.093643e+01 2.238079 0.9779670 3.602324e-04 3.808073e-03
## PON2 2.313181e+03 1.074232 0.1537122 1.988788e-13 2.146750e-11
## POU2F2 1.657164e+02 2.933520 0.8235023 6.715802e-06 2.096624e-04
## PPIF 1.532065e+03 1.335636 0.2722623 4.804594e-08 1.647168e-06
## PRKAA2 3.039372e+02 1.007814 0.2007401 5.021974e-08 2.451681e-06
## PRL 1.655380e+01 8.596443 3.0138236 1.140338e-06 3.625109e-05
## PRR5L 2.495893e+02 1.242970 0.3027123 1.983990e-06 4.794356e-05
## PRRG4 1.214308e+02 1.854234 0.3212586 4.771313e-10 3.117661e-08
## PSMA6 2.734154e+03 1.136521 0.1315252 4.909662e-19 9.358000e-17
## PTGER4 5.719605e+02 1.830723 0.7487120 4.303826e-04 3.950829e-03
## PTGES 1.439972e+03 2.402906 0.3694949 4.337274e-12 4.013007e-10
## PTGFR 1.473666e+03 1.333797 0.3509714 7.102005e-06 1.296707e-04
## PTGS1 3.208293e+02 2.933646 0.4424782 1.478942e-12 1.832171e-10
## PTGS2 1.899272e+03 5.012726 0.5341659 4.040385e-23 1.486830e-20
## PTP4A1 3.075040e+03 1.994389 0.3239065 2.681518e-11 1.820233e-09
## PTX3 1.142842e+04 1.319715 0.9675583 3.601645e-03 2.077164e-02
## QRFP 1.455290e+01 1.303863 0.5807054 1.252885e-03 1.371634e-02
## QSOX1 2.867060e+04 1.515281 0.2010397 2.483105e-15 3.163387e-13
## RAB27B 5.814695e+02 1.997169 1.1013464 1.060782e-03 8.737817e-03
## RAI14 2.802887e+03 1.269703 0.1991646 1.457964e-11 1.036310e-09
## RASD1 2.711648e+02 2.427130 0.8097915 4.972186e-05 7.462309e-04
## RASD2 2.142985e+02 1.179032 1.1724539 4.243393e-03 2.801823e-02
## RASSF8 2.218562e+03 1.320865 0.1906827 3.031403e-13 3.103756e-11
## RCAN1 1.612563e+04 2.466207 0.3113189 6.305053e-17 9.526200e-15
## RELB 9.539494e+02 1.956067 0.2949149 1.910758e-12 1.954601e-10
## RGS2 2.978901e+02 2.636790 0.8063260 2.036688e-05 3.468366e-04
## RIPK2 8.270156e+02 1.373800 0.2140324 9.100186e-12 8.173577e-10
## RND3 1.028541e+04 1.451636 0.1918329 2.502267e-15 3.163387e-13
## RNF122 7.678555e+01 1.006282 0.5690021 3.646360e-03 2.722267e-02
## RNF145 3.826972e+03 1.007653 0.1657035 9.324339e-11 5.299152e-09
## RNF152 1.738089e+02 2.240674 0.4125295 2.924410e-09 1.576226e-07
## RNF182 4.258047e+02 3.423458 0.5743234 3.682829e-11 3.448598e-09
## RORB 4.955201e+01 2.437492 0.5425452 2.225839e-07 8.399434e-06
## RPL4P6 1.000677e+01 1.306263 0.6716062 2.451898e-03 3.374158e-02
## RPS20P22 2.228498e+01 1.192861 0.5775793 1.734117e-03 1.778934e-02
## RSPO3 8.198072e+02 5.890991 0.5554950 9.046649e-29 4.220759e-26
## RTP4 1.059646e+02 1.218214 0.2547436 1.358006e-07 4.900820e-06
## SAA1 4.784027e+02 2.568778 1.0106821 2.654224e-04 2.650615e-03
## SAA2 1.255705e+02 4.260920 0.7021649 4.910950e-11 4.332246e-09
## SAT1 2.073840e+04 1.784178 0.3542505 2.479317e-08 7.416235e-07
## SCG2 2.675174e+02 1.080259 0.9336744 6.626567e-03 4.503667e-02
## SCN4B 1.264360e+03 3.328872 0.5411096 1.219082e-11 1.036310e-09
## SEMA3A 4.783957e+03 2.702118 0.2981309 4.686091e-21 1.095417e-18
## SERPINE2 1.501515e+05 2.182372 0.3375904 5.578685e-12 3.994909e-10
## SFRP1 6.190345e+03 1.382835 1.3141795 4.467758e-03 1.998790e-02
## SGIP1 4.196803e+02 1.960941 0.6118818 5.031296e-05 7.520970e-04
## SHISA2 4.130043e+02 1.210629 0.4536689 3.530874e-04 4.549648e-03
## SIK1 7.376370e+02 2.827056 0.1882054 2.418976e-52 1.179244e-48
## SLC11A2 3.378774e+03 1.745962 0.1961874 3.282539e-20 6.177573e-18
## SLC12A2 1.385153e+03 1.341377 0.2714521 5.247323e-08 1.867194e-06
## SLC16A3 6.926167e+03 1.405185 0.4120650 3.000935e-05 4.119425e-04
## SLC18B1 7.105970e+02 2.008708 0.2429418 6.159878e-18 1.253404e-15
## SLC19A2 5.730682e+02 1.264177 0.1992047 1.748956e-11 1.407395e-09
## SLC19A3 1.674473e+02 1.903320 0.4012214 6.003468e-08 3.588532e-06
## SLC22A23 1.685260e+03 1.364283 0.1935200 1.068862e-13 1.260647e-11
## SLC24A3 1.506594e+02 1.466348 0.6177079 5.553864e-04 8.114456e-03
## SLC2A1 5.672214e+03 1.451183 0.2981852 5.327702e-08 1.420354e-06
## SLC39A14 1.855808e+04 2.247985 0.2326009 1.479500e-23 3.846006e-21
## SLC39A8 4.922251e+03 3.639180 0.3114466 2.919483e-33 1.808509e-30
## SLC6A6 8.148649e+03 1.309083 0.3608285 1.679801e-05 2.311707e-04
## SLC7A2 1.872977e+03 2.813079 0.8182875 8.177732e-06 1.625785e-04
## SLC8A3 1.029543e+02 4.685599 0.6320243 3.574569e-15 5.594711e-13
## SLPI 7.161405e+03 1.760180 0.3047765 2.293982e-10 1.194147e-08
## SMIM3 5.842934e+02 1.251254 0.4116482 1.085922e-04 1.266363e-03
## SMIM43 1.767716e+02 1.989825 0.6024905 3.197126e-05 5.287619e-04
## SMOC1 1.732156e+04 3.438956 0.3298288 1.210608e-27 3.943548e-25
## SMOX 1.941623e+03 1.355709 0.3549630 7.917416e-06 1.585412e-04
## SOD2 9.390512e+04 4.112535 0.2772179 2.716301e-51 7.414166e-48
## SOX4 1.545970e+03 2.073806 0.2587565 3.913057e-17 6.897183e-15
## SPIB 1.294302e+01 1.483326 0.7526643 1.596444e-03 2.427584e-02
## SPINK13 3.309098e+01 3.601774 1.1708199 2.179566e-05 3.064991e-04
## SPINK6 1.535810e+01 7.385623 1.4538499 7.404683e-09 4.550934e-07
## SPON1 4.469152e+02 1.316802 0.6338675 1.558759e-03 1.190496e-02
## SPTSSA 1.925828e+03 1.565621 0.1702471 2.093875e-21 6.692432e-19
## SQOR 2.021603e+03 1.030183 0.1571823 5.189072e-12 3.781687e-10
## SRPX2 2.320773e+03 2.343553 0.4910397 3.376463e-08 1.214881e-06
## SST 3.613849e+02 5.886061 1.3919670 6.752412e-09 3.320613e-07
## SSTR1 2.426460e+02 2.850821 0.8634956 3.035334e-05 5.511474e-04
## ST3GAL1 2.597963e+03 1.213049 0.2599153 1.714545e-07 5.155029e-06
## ST3GAL5 5.528717e+02 1.548630 0.3190589 6.121994e-08 2.287259e-06
## STAMBPL1 4.877771e+02 1.200070 0.5616432 1.485230e-03 1.201588e-02
## STAT4 1.322916e+02 1.045515 0.3380969 1.449445e-04 2.734412e-03
## STC1 4.235703e+03 7.479219 1.0018867 2.433576e-16 2.984417e-14
## STEAP1 2.797792e+02 1.744698 0.4564824 5.663710e-06 1.228934e-04
## STEAP1B 2.861667e+02 1.002498 0.4429707 1.419869e-03 1.382439e-02
## STK32B 3.413299e+02 1.185884 0.2673203 6.851099e-07 1.963041e-05
## SULF2 2.664828e+04 1.413584 0.3838868 1.012755e-05 1.639995e-04
## SULT1C4 3.928120e+01 1.693047 0.5710026 1.035441e-04 1.133182e-03
## TCF21 1.790002e+01 4.344919 1.5477969 1.114518e-04 2.883756e-03
## TFPI 1.412879e+03 1.664524 0.3287410 1.451638e-08 6.575825e-07
## TFPI2 1.455196e+03 4.238781 0.8988743 2.521478e-08 8.465908e-07
## TFRC 8.189955e+03 2.078548 0.1934085 2.147872e-28 8.086391e-26
## TGFB3 2.242881e+03 1.843219 0.4302944 6.360107e-07 1.525542e-05
## TGFBI 6.615255e+04 1.836117 0.5524936 1.911295e-05 2.328971e-04
## TIFA 4.627990e+02 1.040960 0.3418771 1.662716e-04 2.037041e-03
## TLCD1 1.985294e+02 1.045181 0.2672941 7.174484e-06 2.207031e-04
## TM4SF20 2.619075e+02 1.803223 0.4312517 9.025603e-07 2.945787e-05
## TMEM100 3.196902e+01 1.361220 1.2214584 4.061771e-03 2.592761e-02
## TMEM132A 1.882636e+03 4.407448 0.8768633 1.023290e-08 4.788658e-07
## TMEM178B 5.958717e+02 1.484594 0.4691950 5.617565e-05 7.856463e-04
## TMEM51 2.610620e+02 1.128810 0.6488258 3.113179e-03 2.176485e-02
## TMEM64 1.091136e+03 1.004901 0.1521935 3.900845e-12 3.803667e-10
## TMPRSS4 4.831423e+01 1.719375 0.5532811 6.373969e-05 9.014090e-04
## TNFAIP2 4.071222e+03 2.457630 0.1946237 8.848210e-38 1.380072e-34
## TNFAIP3 3.178494e+03 2.796585 0.2341084 1.494296e-34 1.127043e-31
## TNFAIP6 1.563837e+03 4.245305 1.0575226 2.529957e-07 6.353801e-06
## TNFRSF10D 2.961672e+03 1.053192 0.3043688 3.292906e-05 4.120870e-04
## TNFRSF11B 6.727519e+04 1.200188 0.4127909 2.024847e-04 1.623836e-03
## TNFRSF1B 1.121884e+02 2.217094 0.6227448 8.572443e-06 1.737680e-04
## TNFRSF21 1.445956e+02 1.497919 0.3165633 1.055692e-07 4.299583e-06
## TNFRSF9 1.193583e+02 2.654105 0.4080305 3.271610e-12 3.688725e-10
## TNFSF10 7.029394e+01 2.471909 0.6212012 1.449961e-06 3.085845e-05
## TNFSF14 8.181516e+01 4.337846 0.5484012 1.560662e-16 3.433206e-14
## TNIP1 3.751579e+03 1.204741 0.1294150 1.010501e-21 2.328627e-19
## TNS4 1.472477e+02 1.294800 0.5710326 8.824860e-04 8.801632e-03
## TPI1 1.783761e+04 1.166746 0.2801532 1.931751e-06 3.583281e-05
## TRABD2B 4.841384e+02 1.495555 0.3208149 1.787865e-07 6.108785e-06
## TRAF3IP2 1.040846e+03 1.152186 0.1576809 2.276908e-14 3.321343e-12
## TREM1 3.871975e+01 5.603808 1.1642664 9.339432e-09 5.121762e-07
## TRPM3 3.020487e+01 1.790069 0.4961230 1.614971e-05 3.005246e-04
## TSKU 1.821690e+03 1.513264 0.1658128 4.858255e-21 1.315770e-18
## TSPAN2 8.885800e+02 1.950473 0.4477532 3.662151e-07 9.731676e-06
## TTPA 7.783546e+01 1.111380 0.3912213 2.830176e-04 3.597387e-03
## TYMP 9.216856e+02 1.076409 0.2777737 7.837143e-06 1.240091e-04
## UCN2 1.229859e+02 3.111809 0.4963528 7.171163e-12 7.412724e-10
## UST 1.596080e+03 1.427718 0.2242967 1.344959e-11 1.036310e-09
## VNN1 5.438306e+01 2.715919 0.4575329 1.148661e-10 7.007885e-09
## VNN2 8.153108e+01 3.297482 0.5061391 1.757560e-12 1.871501e-10
## VNN3P 6.230433e+01 2.995549 0.4907866 4.525524e-11 2.831814e-09
## VWC2 5.705884e+01 1.993354 0.8104603 2.950121e-04 2.681150e-03
## WFDC1 1.103406e+02 1.337478 0.8958468 2.940314e-03 2.299947e-02
## WIF1 3.759075e+01 2.782047 0.4616518 1.239190e-10 1.029569e-08
## WNT2B 8.395491e+02 2.252871 0.3617560 2.252984e-11 1.859716e-09
## WNT5A 7.546576e+03 1.141339 0.9785697 4.901497e-03 2.436832e-02
## WTAP 4.346894e+03 1.521236 0.1402607 1.726808e-28 7.595982e-26
## WTAPP1 1.654237e+01 5.473717 1.5494039 8.267659e-06 2.122180e-04
## WWC1 1.292633e+03 1.359271 0.2439464 1.769480e-09 8.438116e-08
## ZC3H12A 1.416814e+03 3.390401 0.2406619 8.169313e-47 2.724303e-43
## ZC3H12D 3.824020e+01 1.297321 0.4994911 4.874061e-04 4.062657e-03
## ZSWIM4 5.328226e+02 1.593892 0.2223834 4.487706e-14 5.492836e-12de_down <- get_downregulated(as.data.frame(res1))
de_down## baseMean log2FoldChange lfcSE pvalue padj
## ABCA3 377.015753 -1.285063 0.3138990 2.338510e-06 6.581030e-05
## ABHD1 21.524180 -1.254763 0.6512420 2.146132e-03 2.110522e-02
## ACAN 98306.117775 -1.610562 0.3617184 4.393585e-07 8.841435e-06
## ACSBG2 33.469644 -1.263470 0.5971136 1.446079e-03 1.331148e-02
## ACTC1 103.268224 -3.443251 0.7400191 1.203220e-07 4.211914e-06
## ADAM11 20.561841 -1.011737 0.6982662 6.354753e-03 4.415248e-02
## ADAMTS15 410.549487 -1.961088 0.6832912 6.658552e-05 1.113218e-03
## ADAMTSL2 13.204259 -1.329758 0.7499819 3.530616e-03 2.991321e-02
## ADAMTSL3 425.077410 -1.767241 0.8298806 5.496507e-04 6.476511e-03
## ADCY10P1 63.445729 -1.326261 0.3182731 1.974200e-06 4.928422e-05
## ADIRF 5787.467265 -1.247385 0.3255748 6.958094e-06 1.100964e-04
## AGAP11 474.628577 -1.271548 0.4633587 2.580982e-04 2.703011e-03
## AGT 141.811683 -1.633583 0.3815770 9.831515e-07 2.944780e-05
## AHNAK2 18003.149533 -1.507080 0.3744199 1.747358e-06 2.971606e-05
## AKAP6 180.989393 -1.799348 0.4449399 2.078179e-06 5.590745e-05
## ALS2CL 1397.878300 -1.457089 0.2866064 1.418369e-08 6.397141e-07
## AMY2B 150.510963 -1.039146 0.3462945 2.014450e-04 2.669309e-03
## ANGPTL7 14.278748 -3.454130 1.2033218 6.338334e-05 1.121581e-03
## ANK3 448.028190 -2.316962 0.5006150 9.305010e-08 3.267669e-06
## AOC2 1532.106656 -2.647167 0.4836191 1.306237e-09 6.703022e-08
## AOC3 357.162416 -1.969689 0.6031509 4.128115e-05 6.291698e-04
## AQP1 206.206120 -2.264265 0.8393430 9.709390e-05 1.961761e-03
## AQP3 33.527696 -2.156407 0.5317509 2.481434e-06 5.953450e-05
## ARMC12 15.201081 -1.494337 1.0231477 3.235431e-03 2.864800e-02
## ARVCF 473.569689 -1.829722 0.3648937 2.337075e-08 9.386698e-07
## ASPDH 19.649923 -1.199486 0.8620086 5.082451e-03 4.035633e-02
## ATP10A 2657.071690 -1.181303 0.3721872 8.215086e-05 9.598032e-04
## ATP1A3 142.635294 -2.041258 0.8291648 4.412357e-04 6.729857e-03
## ATP6V1G2 71.244497 -1.046756 0.3411790 1.638119e-04 1.969309e-03
## ATP8A1 68.115640 -1.492946 0.5627349 2.808849e-04 2.581461e-03
## ATP8B1 2453.483783 -1.411356 0.3444995 2.151757e-06 3.637273e-05
## B3GALT2 23.482745 -2.873992 1.1945438 1.744739e-04 2.586875e-03
## B3GNT7 162.000391 -1.990022 0.5882246 2.558914e-05 4.194630e-04
## B4GALNT3 59.833394 -2.806016 0.7113475 2.866794e-06 6.666747e-05
## BCL2L15 26.237783 -1.370308 0.6833218 1.625933e-03 1.641733e-02
## BEND6 688.975963 -1.029170 0.2236679 3.647051e-07 1.079786e-05
## BEX2 70.059034 -2.293182 0.5619596 1.154608e-06 2.945787e-05
## BGN 11876.338002 -1.225469 0.2604050 1.789625e-07 4.660137e-06
## BHLHE41 159.737100 -2.515217 0.7366800 8.276863e-06 1.615426e-04
## BHMT 116.110772 -1.884790 0.8138716 4.317432e-04 4.979789e-03
## BMS1P3 88.956079 -1.268406 0.4029605 9.135738e-05 1.218908e-03
## C11orf21 121.946485 -1.829427 0.3795000 6.050981e-08 2.339543e-06
## C14orf132 2295.231850 -1.339457 0.1562147 7.421381e-19 1.526571e-16
## C1QTNF3 497.122399 -1.936780 0.3894399 3.691284e-08 1.422065e-06
## CA3 49.877804 -1.755337 1.2482422 1.920479e-03 1.514801e-02
## CA5B 1701.187064 -1.014261 0.2682323 1.289175e-05 1.863380e-04
## CACNG4 180.277917 -1.999636 0.7563912 2.771496e-04 3.479427e-03
## CALHM3 20.628746 -2.900298 1.2893675 6.151918e-04 7.546925e-03
## CAMK2A 52.325302 -1.489415 0.4847372 1.039248e-04 1.179969e-03
## CAPG 4321.819107 -1.177359 0.1698664 3.052041e-13 2.826419e-11
## CAPN12 33.497960 -1.282498 0.7451407 2.975964e-03 2.346671e-02
## CAPS 1668.602018 -1.329223 0.1478787 1.767998e-20 4.980425e-18
## CARD10 326.283032 -1.480964 0.2661124 1.499924e-09 8.390030e-08
## CATSPER1 54.196132 -1.944452 0.4950932 3.595630e-06 6.415244e-05
## CCDC146 93.507084 -1.128783 0.4480729 6.761652e-04 7.114749e-03
## CCDC154 31.406929 -1.451489 0.6971465 1.191071e-03 8.600687e-03
## CCDC171 117.801141 -1.100566 0.2969457 1.574376e-05 3.186527e-04
## CCDC74B 348.955084 -1.139616 0.2602449 9.389474e-07 3.032177e-05
## CCN3 9622.166931 -2.350994 0.8108823 6.107325e-05 6.960915e-04
## CD248 962.892600 -1.626146 0.4916908 3.215136e-05 4.432622e-04
## CD8B2 60.127920 -1.953092 0.8954595 4.430554e-04 4.482179e-03
## CEP126 928.576802 -1.028124 0.2164485 1.763273e-07 5.115181e-06
## CFAP43 30.073996 -1.228666 0.5645460 1.440723e-03 1.150704e-02
## CFAP57 57.363452 -1.470326 0.5291049 1.850691e-04 2.295100e-03
## CGN 182.025879 -2.904364 0.7737784 2.993394e-06 7.601306e-05
## CHAD 29.639335 -1.189174 0.5489565 1.459899e-03 1.011106e-02
## CHRFAM7A 146.856508 -1.189673 0.5401027 1.197126e-03 1.122737e-02
## CHRNE 27.924595 -1.007892 0.6708689 5.867386e-03 3.914000e-02
## CHST5 13.559838 -1.852881 1.1390034 2.738841e-03 2.361682e-02
## CILP 827.669576 -2.026429 0.9737463 7.189262e-04 6.074168e-03
## CILP2 53.070432 -2.618685 0.6874303 2.693361e-06 5.054118e-05
## CLCNKB 68.812605 -1.601729 0.4062749 4.096877e-06 7.172565e-05
## CLEC18A 68.780536 -1.421213 0.4229760 4.280727e-05 6.469774e-04
## CLEC18B 14.956129 -1.566794 1.0703042 3.653382e-03 3.161685e-02
## CLEC3B 9796.319367 -1.498961 0.9695998 2.621217e-03 1.604418e-02
## CLSTN2 107.281236 -3.028003 0.4718350 5.145505e-12 5.477424e-10
## CMKLR1 1722.550631 -1.263794 0.3973894 7.104156e-05 1.005729e-03
## CMYA5 207.394124 -1.260486 0.2244646 1.398087e-09 7.847360e-08
## CNKSR2 104.408727 -1.191759 0.6766450 1.990162e-03 1.686166e-02
## COL15A1 17248.568102 -1.890275 0.3365949 9.483753e-10 3.834960e-08
## COL21A1 220.343823 -2.388929 0.8896497 1.230549e-04 1.555143e-03
## COL25A1 16.632569 -2.121724 0.8131889 2.881469e-04 3.929133e-03
## COL9A2 438.604066 -2.682981 0.7738935 5.999348e-06 1.517859e-04
## COLGALT2 479.654271 -1.323083 0.3141209 1.461611e-06 3.385418e-05
## CORIN 99.093872 -2.129845 0.4496411 8.348957e-08 3.504110e-06
## CORO2B 466.820287 -2.965810 0.4227098 3.508555e-14 4.369065e-12
## CPA1 21.695625 -1.984429 1.3864947 2.960846e-03 2.611674e-02
## CPAMD8 285.360987 -1.291569 0.5861861 9.084664e-04 9.678947e-03
## CRABP2 203.655738 -2.262373 0.5181753 4.384959e-07 1.316902e-05
## CRACD 110.787253 -1.250911 0.7326449 2.792078e-03 2.213622e-02
## CRACR2B 223.353202 -1.135170 0.5184866 1.475605e-03 1.173956e-02
## CRIP1 565.793697 -2.612128 0.4327552 3.317077e-11 2.526737e-09
## CRIP2 3549.025996 -2.094658 0.2090601 3.881360e-25 1.351125e-22
## CSPG4 14815.266629 -1.327458 0.3009087 6.457337e-07 1.258152e-05
## CSPG4P13 58.732885 -5.626652 1.3922118 2.352848e-06 6.239426e-05
## CSPG4P5 50.764190 -1.041899 0.4263214 8.980599e-04 7.905979e-03
## CST6 211.140873 -2.779060 0.4121277 3.339262e-13 3.882484e-11
## CYBRD1 28254.127157 -1.145037 0.2961076 7.067391e-06 9.530443e-05
## CYP2A7 11.141246 -2.425861 1.3739543 8.899119e-04 1.532619e-02
## CYS1 611.237110 -1.416366 0.5659202 4.634200e-04 4.502645e-03
## CYSRT1 49.910690 -1.468329 0.4348461 3.338871e-05 5.215779e-04
## DACT3 131.743599 -1.411501 0.2488710 9.737971e-10 6.533584e-08
## DBH 24.439959 -1.390844 0.5232614 4.169777e-04 5.275411e-03
## DCST2 22.973495 -1.712685 0.5246418 5.543758e-05 1.000247e-03
## DCT 22.285197 -1.614783 0.8724753 2.089888e-03 2.016322e-02
## DEGS2 15.126546 -2.906273 0.8323824 1.600107e-05 3.833691e-04
## DES 63.138582 -2.948909 0.3743269 1.327035e-16 2.168605e-14
## DIRAS1 692.503300 -1.955234 0.2973138 1.895121e-12 1.510937e-10
## DMPK 3186.580340 -1.170953 0.2605414 5.081352e-07 1.080548e-05
## DNAH12 21.842418 -1.212792 0.5728262 1.621276e-03 1.638499e-02
## DNAJC22 1117.128890 -1.331470 0.6490584 1.445037e-03 1.177066e-02
## DOC2B 35.413419 -2.590579 1.0405062 3.969929e-04 4.290863e-03
## DRC1 13.808682 -1.466169 0.7751943 2.441578e-03 2.167472e-02
## DYSF 242.355034 -1.518080 0.4629615 4.825591e-05 7.485841e-04
## ECRG4 1079.407508 -1.495508 0.6063143 2.824989e-04 3.172760e-03
## EFCAB13 79.172635 -1.405410 0.3000531 1.888524e-07 5.124101e-06
## EFHD1 570.996482 -2.414252 0.3575676 2.697360e-13 2.882652e-11
## EGR1 1981.169224 -1.245771 0.3696016 3.558396e-05 5.042758e-04
## ELAPOR2 244.921339 -1.005518 0.5266597 3.076522e-03 2.213622e-02
## ELFN1 64.342061 -3.905884 0.9491141 7.481900e-07 2.349742e-05
## ELL3 80.749252 -1.504844 0.3408096 6.066941e-07 1.484833e-05
## EPHB1 365.366235 -1.149693 0.3569098 8.211365e-05 1.142874e-03
## EPPK1 22.885457 -1.782187 0.6115071 1.686159e-04 2.650615e-03
## ERICH2 198.557046 -1.161206 0.4306858 3.958153e-04 4.641387e-03
## EXPH5 339.454009 -2.366539 0.7204482 1.159971e-05 2.190414e-04
## FABP3 165.638649 -1.833071 0.4025445 2.282745e-07 8.446010e-06
## FAHD2CP 16.422616 -1.025693 0.6772821 6.096482e-03 4.492995e-02
## FAIM2 183.998301 -2.341886 0.5936960 1.448740e-06 4.085370e-05
## FAM107A 327.859468 -2.140095 0.8967397 2.980747e-04 3.407459e-03
## FAT2 46.527348 -1.025545 0.6927706 4.960927e-03 3.458283e-02
## FEM1B 4043.316589 -1.431044 0.2236633 1.019194e-11 5.902250e-10
## FGF17 9.758976 -2.227880 1.1874185 1.953632e-03 1.814471e-02
## FGF18 36.538244 -2.016865 0.8526909 3.997339e-04 4.741594e-03
## FGF9 257.284848 -2.228891 0.7737576 6.739549e-05 1.163169e-03
## FGFR3 2163.748909 -1.381948 0.6023298 6.766231e-04 5.559747e-03
## FHL1 26783.194525 -1.401797 0.2023546 2.311551e-13 2.395568e-11
## FOS 504.217464 -2.694816 0.3835718 6.539774e-14 8.299345e-12
## FOSB 37.351347 -1.969974 0.4142454 1.031228e-07 3.657036e-06
## FOXC2 647.050352 -1.787574 0.2478047 3.066221e-14 3.885824e-12
## FOXD2 33.464485 -1.542837 0.6583982 8.755382e-04 6.478994e-03
## FOXL1 292.096735 -1.140777 0.3822493 1.694870e-04 2.068834e-03
## FOXO1 586.370843 -1.778697 0.2491210 3.414031e-14 4.603926e-12
## FOXO6 66.815483 -1.038527 0.3701977 3.626458e-04 3.329806e-03
## FRMD4B 1281.838578 -2.036062 0.4216586 3.479808e-08 1.455709e-06
## FRMD7 11.921918 -6.784019 2.6742680 2.644951e-06 7.916201e-05
## FRMPD3 161.333797 -1.218784 0.3311177 1.616020e-05 3.261941e-04
## FRZB 193.002383 -3.209803 0.7948269 1.166885e-06 2.963174e-05
## FXYD1 183.164231 -2.295101 0.6816747 8.999774e-06 2.693898e-04
## FYB1 16.795919 -2.408688 0.9061819 2.371648e-04 5.330230e-03
## GAL3ST2 7.590008 -3.187241 1.3018505 8.474253e-04 4.755831e-02
## GALNT16 402.694919 -1.208847 0.5795918 1.613850e-03 1.288652e-02
## GALNT8 18.153767 -3.761087 1.0091859 8.545114e-06 2.229282e-04
## GAP43 751.150787 -1.327936 0.7491781 2.319832e-03 1.372611e-02
## GARNL3 190.944324 -1.049521 0.2926646 2.536297e-05 4.714956e-04
## GCNT3 70.902370 -1.260718 0.4589637 3.290023e-04 2.936996e-03
## GDF15 598.524508 -1.019590 0.5054259 2.061089e-03 1.490528e-02
## GDF7 46.902886 -2.587568 0.6578103 2.693618e-06 5.054118e-05
## GJA3 7.596339 -2.758012 1.0842367 4.640652e-04 3.289137e-02
## GLIS2 1704.751650 -1.228029 0.2318981 7.378003e-09 2.847597e-07
## GOLGA8T 27.618598 -2.488696 0.8114264 1.061174e-04 1.200890e-03
## GP1BB 222.456979 -1.229570 0.2797364 8.319963e-07 2.551040e-05
## GPNMB 1083.556924 -2.449166 1.0295265 1.325692e-04 1.687374e-03
## GPR132 28.953747 -2.004647 0.4792247 1.320445e-06 3.306695e-05
## GPR153 502.268837 -1.205807 0.3759651 8.314698e-05 1.095705e-03
## GRIN3A 20.273347 -1.256554 0.9529978 4.682386e-03 3.544600e-02
## H1-9P 26.926095 -1.745860 0.8352573 1.063775e-03 7.901788e-03
## HCFC1R1 1198.798833 -1.355353 0.2083613 5.506385e-12 5.037145e-10
## HCG9P5 49.245761 -1.258542 0.3883616 7.750880e-05 8.837506e-04
## HLF 38.763944 -2.327238 1.1794448 6.066560e-04 5.025710e-03
## HRCT1 778.328519 -1.582203 0.7864505 6.696286e-04 6.365673e-03
## HSPB1 7641.930755 -1.177885 0.2566545 3.131004e-07 8.316729e-06
## HSPB6 1075.356651 -2.028563 0.4762030 8.467274e-07 2.274831e-05
## HSPB7 4860.623567 -1.673536 0.4785791 2.049927e-05 3.005246e-04
## IGFBP6 10383.276569 -1.332095 0.3530611 8.926424e-06 1.479687e-04
## IL17RD 170.889034 -1.339754 0.3098238 9.830885e-07 2.696105e-05
## IL17RE 133.102073 -1.252093 0.3446128 1.697215e-05 4.563248e-04
## INSYN2B 115.859608 -1.156949 0.4990674 1.066408e-03 1.370222e-02
## ITGA10 1571.372123 -1.689455 0.6456785 1.973424e-04 2.100522e-03
## ITGA11 35342.171016 -1.722557 0.3638353 7.819625e-08 1.978437e-06
## ITIH5 5996.771308 -2.713300 0.3308518 1.160491e-17 1.657114e-15
## ITM2A 1268.251087 -1.748091 0.4771001 1.027091e-05 1.920358e-04
## KCNA1 97.007267 -3.383389 0.9362829 4.016577e-06 8.602600e-05
## KCNA4 730.633782 -2.022016 0.5523960 4.024428e-06 6.823102e-05
## KCNA6 37.779639 -3.741301 1.1559624 1.742377e-05 3.190701e-04
## KCND3 369.526820 -1.198549 0.4551559 3.581770e-04 3.860534e-03
## KCNMB4 26.861049 -1.160833 0.9620031 7.754759e-03 3.732469e-02
## KCNN4 397.105542 -1.163577 0.3730923 1.116619e-04 1.437954e-03
## KHDRBS3 715.333161 -1.111763 0.2857858 7.598137e-06 1.317572e-04
## KHK 53.068902 -1.357907 0.3380413 3.805173e-06 7.011252e-05
## KIF26A 40.389957 -1.046881 0.6980850 5.548852e-03 3.455373e-02
## KLF13 2400.376993 -1.024484 0.2016952 2.974112e-08 9.076425e-07
## KLF2 1538.175854 -1.600727 0.3385510 8.060620e-08 2.952822e-06
## KLF5 528.335463 -1.467675 0.4142819 1.917693e-05 3.187926e-04
## KLHDC9 120.025141 -1.374845 0.4054818 3.646698e-05 5.934564e-04
## KRT14 30.792348 -4.308645 0.8612096 3.099286e-08 1.499945e-06
## KRT16 129.264438 -5.234739 0.9134643 1.196075e-10 8.970684e-09
## KRT4 464.818889 -5.735558 1.1359378 1.982936e-10 1.291110e-08
## KY 225.729559 -3.853717 0.4327509 2.810178e-20 8.778199e-18
## LAMA2 291.161267 -1.138377 0.6531875 2.603583e-03 2.242092e-02
## LAMP3 105.433745 -2.841191 0.6652342 3.631149e-07 1.281331e-05
## LDHD 107.970174 -1.033806 0.2393659 1.454475e-06 3.576313e-05
## LFNG 32.900329 -1.300203 0.7611724 2.927274e-03 1.770950e-02
## LINGO1 160.447478 -2.656180 0.9658888 4.412980e-05 7.520970e-04
## LLGL2 74.907823 -1.049845 0.6615068 4.239395e-03 2.675715e-02
## LMNTD2 61.472286 -1.031779 0.3812985 4.967940e-04 5.653868e-03
## LOXL4 1332.917470 -1.334758 0.2232309 1.528618e-10 9.214456e-09
## LPIN1 2302.130351 -1.171507 0.2882473 3.273409e-06 5.695936e-05
## LRATD2 458.113588 -1.140646 0.4596790 5.553769e-04 4.846602e-03
## LRRC2 558.494529 -1.405527 0.5337149 2.523622e-04 2.729495e-03
## LRRC32 102.324567 -1.437678 0.4792388 1.198515e-04 2.345248e-03
## LRRC66 73.941008 -1.163971 0.3415012 4.423200e-05 7.645259e-04
## LSP1 2833.607888 -1.344089 0.5280451 4.525511e-04 4.162122e-03
## LTC4S 44.865978 -2.915220 0.4650264 2.779932e-11 2.599785e-09
## LURAP1L 1022.081975 -1.176675 0.4214829 2.413769e-04 2.501855e-03
## MAF 1976.384006 -1.301286 0.2246323 4.379055e-10 2.170127e-08
## MAMLD1 657.779310 -1.618137 0.4622408 2.098826e-05 3.346990e-04
## MAP1LC3C 151.329232 -3.643845 0.6126032 5.578467e-11 4.889463e-09
## MAP3K7CL 104.495182 -1.170964 0.3499518 5.051573e-05 1.149943e-03
## MAPK15 48.757429 -1.508367 0.4361640 2.851590e-05 5.287619e-04
## MATN2 782.586932 -1.412708 0.6849873 1.141868e-03 7.800486e-03
## MEF2C 437.222965 -1.721697 0.5051448 2.167897e-05 3.839499e-04
## MEIS2 1741.599442 -1.968757 0.3035395 4.166109e-12 3.994909e-10
## MEOX2 389.514342 -1.446795 1.0221564 1.664849e-03 1.354671e-02
## METTL7B 9.520955 -1.374284 0.7536133 2.762553e-03 2.375366e-02
## MFAP5 1030.120209 -1.414261 0.5500310 4.307413e-04 4.466531e-03
## MFNG 8.393073 -6.428837 2.7617309 2.504541e-05 3.250053e-03
## MFSD4A 24.805049 -1.196847 0.7407435 3.847801e-03 3.289137e-02
## MMP25 117.868530 -1.249706 0.4509767 2.432310e-04 4.191991e-03
## MRAP2 375.074752 -3.178347 0.3801354 1.026867e-18 2.643835e-16
## MROH7 215.469400 -1.062538 0.3395108 1.210507e-04 1.538174e-03
## MTMR11 970.297572 -1.177529 0.1722005 6.273701e-13 6.973848e-11
## MTND5P1 9.647996 -1.848005 0.8653726 1.461290e-03 2.277022e-02
## MTNR1B 21.260484 -1.437819 0.6830614 1.410320e-03 2.220482e-02
## MTSS1 112.986535 -1.163761 0.4888144 8.310811e-04 7.778806e-03
## MYH7B 87.851637 -1.326887 0.3097342 1.206311e-06 3.532902e-05
## MYO15B 741.958451 -1.186677 0.3702728 7.442590e-05 9.011746e-04
## MYO1D 2647.558083 -1.349657 0.3524698 4.961433e-06 9.042665e-05
## MYO5B 309.085294 -1.021626 0.6013222 3.101797e-03 2.543684e-02
## MYO5C 134.670118 -1.200629 0.7547310 3.158623e-03 2.251528e-02
## MYOC 397.744720 -3.847299 1.0128411 5.291678e-07 1.863459e-05
## NANOS1 694.058602 -1.105952 0.4487854 6.835446e-04 5.821119e-03
## NAP1L2 40.628546 -2.459716 0.5670250 4.632478e-07 1.576067e-05
## NAP1L3 724.230220 -1.094032 0.1073907 2.638264e-25 8.745833e-23
## NBEAL2 359.009484 -1.002695 0.2218851 5.506236e-07 1.576067e-05
## NCAM1 605.963450 -1.052321 0.9195226 6.825048e-03 3.752524e-02
## NEK11 308.734050 -1.265110 0.2147393 2.738357e-10 1.804598e-08
## NGEF 933.565125 -3.409442 0.3339515 5.278199e-26 2.086304e-23
## NHSL2 45.317007 -2.421387 0.8136548 8.464175e-05 9.930617e-04
## NIBAN1 5222.706171 -2.109377 0.2638324 6.236711e-17 8.406495e-15
## NKX6-1 293.187884 -1.002884 0.2733547 2.074720e-05 4.175673e-04
## NLGN3 48.703247 -1.224334 0.3866430 1.023932e-04 1.402943e-03
## NOXA1 80.560897 -1.339834 0.4786378 2.731512e-04 2.522795e-03
## NPAS1 86.985734 -1.992016 0.5388867 9.461167e-06 1.566634e-04
## NPR1 12.277709 -1.897028 0.9305978 1.655905e-03 1.584515e-02
## NPTX1 20.712932 -1.263232 0.9691848 4.329487e-03 3.584354e-02
## NR3C2 101.059851 -1.089493 0.5871236 2.896580e-03 2.276015e-02
## NRTN 33.448393 -1.567615 0.9715925 2.288649e-03 1.663843e-02
## NTNG2 90.591989 -1.529677 0.4745860 6.370408e-05 1.028695e-03
## OLFML1 121.124051 -2.685450 0.7511508 3.528111e-06 1.213815e-04
## OR2S1P 16.290562 -1.242272 0.6435029 2.427932e-03 2.259210e-02
## OSBPL9 2130.127304 -1.181396 0.2230047 7.292457e-09 3.251574e-07
## PARD6A 30.740169 -1.133662 0.4842893 1.115529e-03 7.898709e-03
## PCSK6 406.491518 -1.174889 0.8095512 4.592690e-03 3.343160e-02
## PDE5A 2797.476216 -1.500589 0.2867284 1.067458e-08 3.936010e-07
## PDIA5 3198.490487 -1.633891 0.2584457 1.412646e-11 1.025576e-09
## PDZD2 207.656705 -1.780034 0.4042766 5.230444e-07 1.712255e-05
## PDZD7 93.035631 -1.642258 0.4377968 8.453126e-06 1.639995e-04
## PDZK1 84.960785 -1.114521 0.2937395 1.128647e-05 1.736526e-04
## PEG3 127.105792 -1.879906 0.6484169 1.433221e-04 1.849169e-03
## PGAM1P8 21.683326 -1.246721 0.5221956 8.934732e-04 9.697893e-03
## PIFO 68.822755 -1.085640 0.4266218 7.081517e-04 5.480015e-03
## PKMP3 25.175276 -1.205983 0.6212646 2.275714e-03 2.055974e-02
## PLA2R1 1362.450545 -1.148806 0.2570709 5.823299e-07 1.648697e-05
## PLAC8 70.225072 -1.249629 0.4324737 2.099934e-04 2.099484e-03
## PLCD1 1845.751266 -1.387938 0.2078699 1.361933e-12 1.268673e-10
## PLCD3 5793.626333 -1.005495 0.2868523 3.088741e-05 3.880826e-04
## PLCL1 36.401847 -1.846321 0.8729484 9.119333e-04 6.696399e-03
## PLEKHA7 126.263000 -1.684181 0.3288609 1.630197e-08 7.683408e-07
## PLEKHB1 38.167137 -1.005381 0.5470169 3.121858e-03 1.869718e-02
## PLEKHF1 518.649014 -1.302468 0.3899896 3.960356e-05 5.685210e-04
## PLXDC1 175.030426 -2.340085 0.4602507 1.806384e-08 9.252699e-07
## PLXNA2 1939.857442 -1.336954 0.3354530 3.500902e-06 6.587656e-05
## PNPLA7 281.945778 -2.012456 0.2985825 7.382766e-13 9.500097e-11
## PODN 180.697240 -3.089446 0.7117446 1.541312e-07 6.055504e-06
## PODXL 402.508663 -1.865747 0.8931161 5.752840e-04 6.699462e-03
## PPFIBP2 810.702951 -1.133252 0.4200180 3.164008e-04 2.991007e-03
## PPM1E 62.916578 -1.164926 0.4651396 6.772333e-04 6.309765e-03
## PRAM1 11.617972 -1.885612 0.9326568 1.176565e-03 1.927088e-02
## PRIMA1 191.164746 -3.548361 0.5831662 1.264664e-11 1.130349e-09
## PRODH 24.839754 -1.597902 1.3137172 3.219346e-03 2.654313e-02
## PROS1 1674.557810 -1.100566 0.4766073 9.303307e-04 8.237770e-03
## PRPH 106.398868 -1.546448 0.7922263 1.190361e-03 1.117495e-02
## PRR33 533.566982 -1.813198 1.1415264 2.141022e-03 1.527916e-02
## PRRT2 411.720813 -1.805944 0.4880981 9.543786e-06 2.228025e-04
## PRSS16 37.987605 -1.459676 0.5544652 3.816746e-04 4.164436e-03
## PRSS27 80.208185 -1.061262 0.2920887 2.165468e-05 3.172365e-04
## PTGIS 2527.086997 -1.474200 0.2547246 3.246471e-10 1.508567e-08
## PTH1R 161.290498 -1.095199 0.6530346 3.332456e-03 2.510448e-02
## PTPN13 1237.044704 -1.111070 0.2420849 3.576575e-07 1.094295e-05
## QRICH2 327.239190 -1.316363 0.1610677 2.484540e-17 6.624460e-15
## RAB37 21.684758 -1.297064 0.6893834 2.193583e-03 1.997090e-02
## RAB39B 52.751903 -2.418209 0.5969572 2.341825e-06 5.689722e-05
## RABGAP1 7183.864311 -1.459803 0.5177810 1.448654e-04 1.423294e-03
## RANP4 12.803469 -1.592747 0.6566210 7.391216e-04 8.306497e-03
## RAPGEF3 528.971785 -1.107590 0.2084726 8.376162e-09 3.602126e-07
## RASA4 1356.312860 -1.950940 0.4807348 1.303357e-06 2.867835e-05
## RASA4B 884.769758 -1.882690 0.5859133 2.872871e-05 4.222665e-04
## RASGEF1A 76.671028 -1.833976 0.4686981 4.678150e-06 1.150729e-04
## RBFOX1 22.428448 -1.023975 0.5615530 3.733048e-03 2.980222e-02
## RCAN2 931.085428 -1.236237 0.4773007 4.856130e-04 3.929901e-03
## RFLNA 132.730166 -2.297870 0.4213935 2.180521e-09 1.927670e-07
## RGMA 963.640847 -1.973983 0.4650205 5.073584e-07 1.363860e-05
## RGS5 315.503717 -1.142722 0.5532036 1.823976e-03 1.455993e-02
## RHOJ 335.649785 -1.329768 0.4304017 1.079885e-04 1.710680e-03
## RINL 155.800686 -1.005843 0.2737947 1.919681e-05 5.061742e-04
## RNF180 67.686547 -1.430966 0.6372707 9.939875e-04 8.547076e-03
## RNF224 41.375887 -1.243105 0.4853894 5.071623e-04 5.248150e-03
## ROBO2 231.788119 -1.541239 0.5400350 1.852074e-04 2.501855e-03
## ROM1 193.756077 -1.369364 0.2680943 2.003033e-08 9.263477e-07
## RSPH9 88.732866 -1.006826 0.2922803 4.860620e-05 6.264978e-04
## RSPO2 131.481071 -1.216695 0.4607049 4.650592e-04 4.658458e-03
## RUBCNL 130.912662 -2.681245 0.5049106 3.246219e-09 1.995342e-07
## S100A5 19.870728 -1.121221 0.6512019 3.972062e-03 3.287475e-02
## SALL4 27.539414 -4.200273 0.7939265 4.425107e-09 2.301265e-07
## SAMD11 1431.853496 -1.612687 0.2823307 5.967715e-10 3.699097e-08
## SCHIP1 120.954962 -1.655803 0.3740087 4.702859e-07 1.394366e-05
## SCNN1A 86.555125 -1.216616 0.3263587 1.368600e-05 2.602940e-04
## SCRG1 2080.786547 -1.936496 0.4684774 9.384167e-07 1.940947e-05
## SEC14L5 24.680020 -1.419432 0.6855743 1.332289e-03 1.401758e-02
## SEMA3B 5352.389096 -1.025430 0.3831811 3.980682e-04 2.847944e-03
## SEMA3D 76.190598 -1.184384 0.6963796 2.614153e-03 2.130791e-02
## SEMA4A 101.551959 -1.118911 0.5659638 2.227799e-03 2.438790e-02
## SEMA5B 61.564780 -2.736086 0.8968042 5.253735e-05 7.642323e-04
## SERPINF1 169.302508 -2.275231 0.7333613 3.626691e-05 5.913162e-04
## SERTAD4 79.525522 -1.051998 1.3501192 7.719023e-03 3.721794e-02
## SESN3 1569.384312 -1.852923 0.2715337 5.860377e-13 4.992255e-11
## SEZ6L 19.998719 -2.359315 1.4371662 9.342977e-04 9.993020e-03
## SGCA 107.870380 -1.081117 0.6013123 3.000964e-03 2.172359e-02
## SGCG 80.441945 -1.619795 1.4292423 3.231891e-03 2.488657e-02
## SGK2 43.715152 -2.111313 0.4224080 3.054592e-08 1.281471e-06
## SHF 393.758207 -1.274752 0.2616507 7.049127e-08 2.656066e-06
## SHISA6 24.611086 -4.114947 0.9176492 2.020615e-07 1.394366e-05
## SIM2 91.642127 -1.224883 1.2850486 5.322080e-03 4.695818e-02
## SIX1 2804.810069 -1.299537 0.2902910 6.078972e-07 1.503503e-05
## SLC22A15 339.379287 -1.083072 0.2246971 1.150408e-07 4.820426e-06
## SLC23A3 95.737130 -1.289135 0.3131716 2.508818e-06 5.711502e-05
## SLC26A4 24.860657 -1.394737 0.9216370 3.519727e-03 2.842021e-02
## SLC29A1 1474.445276 -1.553276 0.1924859 4.237679e-17 7.375998e-15
## SLC29A2 121.857624 -1.611085 0.2342346 3.779901e-13 4.992255e-11
## SLC38A4 254.638686 -2.073800 0.6189823 2.181844e-05 3.852334e-04
## SLC7A8 389.873983 -1.214351 0.6155887 1.907688e-03 1.752387e-02
## SMIM38 27.042783 -4.382781 1.0631495 1.318103e-06 3.305917e-05
## SMIM5 47.458314 -1.609223 0.6289061 4.392911e-04 4.449629e-03
## SMOC2 2303.628433 -2.770241 0.4833502 2.388116e-10 1.374114e-08
## SOX15 73.330513 -1.742235 0.3635835 9.357606e-08 2.819793e-06
## SPTB 92.299943 -1.305786 0.3974363 5.675941e-05 1.263642e-03
## SPTBN5 132.719837 -1.962337 0.6310974 5.847500e-05 8.390818e-04
## SPTSSB 375.022462 -1.594619 0.5607609 1.418735e-04 1.840452e-03
## SSPN 887.901855 -1.088874 0.2203905 6.006265e-08 2.367577e-06
## SSTR5 66.490215 -5.010855 1.1479979 1.460270e-07 4.962321e-06
## STARD5 225.312088 -1.128885 0.3023195 1.290775e-05 2.693898e-04
## STEAP4 42.571884 -1.877242 1.2130531 1.124957e-03 9.443768e-03
## STON2 27.252268 -1.810697 0.9032067 8.365084e-04 7.436767e-03
## SULT4A1 10.016764 -2.927633 1.1051590 3.564845e-04 5.018121e-03
## SYNE3 2188.475595 -1.599019 0.2377249 9.169335e-13 8.290865e-11
## SYT17 24.852105 -1.961232 0.7099494 1.826412e-04 2.687496e-03
## TAMALIN 52.325812 -1.515523 0.4892315 8.570893e-05 9.638035e-04
## TBX18 1537.116322 -1.216247 0.2697481 4.286408e-07 1.285260e-05
## TBX4 31.692058 -1.979394 0.6318390 6.732103e-05 8.185293e-04
## TBXA2R 121.644245 -1.114572 0.3415366 7.645719e-05 1.050237e-03
## TCEA3 1084.677786 -1.408992 0.2178703 7.309766e-12 6.539070e-10
## TCTE1 9.299801 -1.473041 0.9884020 4.170272e-03 3.482488e-02
## TENT5C 203.497481 -1.180133 0.3065061 7.952180e-06 1.638912e-04
## TFF3 22.382272 -1.091838 0.8283281 5.905046e-03 4.186652e-02
## THBD 95.982937 -1.979329 0.5257878 6.005290e-06 1.900877e-04
## THBS2 3095.012700 -2.919494 0.4918931 2.942617e-11 1.686657e-09
## THBS4 105.207575 -2.090875 1.0393777 5.490718e-04 5.325202e-03
## THRB 310.067738 -1.691076 0.2916382 3.570349e-10 2.288043e-08
## TIMP3 19456.848976 -1.585971 0.5181764 7.297752e-05 6.971286e-04
## TIMP4 172.168087 -1.130937 0.4604204 6.809296e-04 9.568344e-03
## TJP2 1395.943044 -1.331902 0.2594287 1.855182e-08 8.162626e-07
## TMEM119 77.169656 -3.608046 0.7617036 6.841188e-08 2.241274e-06
## TMEM150C 68.088867 -1.268193 0.5347302 8.620463e-04 8.012121e-03
## TMEM151A 32.796145 -1.028650 0.6911394 5.703328e-03 3.833624e-02
## TMEM26 797.699944 -1.646437 0.6069331 1.701520e-04 1.788150e-03
## TMEM266 96.860109 -1.433141 0.3248623 5.852296e-07 1.731620e-05
## TMEM30B 1917.311476 -1.396335 0.2839094 5.474437e-08 1.662356e-06
## TMIE 29.153782 -1.928045 0.4362153 5.571299e-07 1.394366e-05
## TNNC1 75.894571 -2.067310 0.6417377 4.234055e-05 6.413267e-04
## TNNC2 26.976095 -1.768501 0.6732211 3.261178e-04 2.913235e-03
## TNNI1 9.352788 -4.663926 1.4614749 3.737693e-05 7.179114e-04
## TNNT2 49.381924 -4.177151 1.2614402 1.517377e-06 4.313403e-05
## TNNT3 68.816333 -4.421658 1.2181412 3.998043e-06 9.038945e-05
## TNXB 2780.828372 -2.578383 0.5888893 2.674004e-07 6.652388e-06
## TOX 597.807341 -1.832693 0.2550538 3.092682e-14 4.256985e-12
## TPD52L1 956.492987 -1.727535 0.3675668 1.150466e-07 3.657712e-06
## TREX2 82.239249 -1.812191 0.4021003 3.411894e-07 1.236881e-05
## TRIB3 1726.801770 -1.766124 0.4398060 2.287277e-06 5.392204e-05
## TRIM29 369.293476 -1.082409 0.8017046 3.632078e-03 2.491220e-02
## TRIM7 98.675952 -1.281488 0.3620580 2.414507e-05 4.528941e-04
## TRMT9B 137.106152 -1.130167 0.4168283 3.956117e-04 4.281300e-03
## TSC22D3 2094.003100 -1.390666 0.2434542 6.999684e-10 3.650479e-08
## TSHR 59.499284 -1.625285 0.4818002 3.592829e-05 4.615630e-04
## TSPOAP1 388.653378 -1.042831 0.2168593 1.314401e-07 4.643291e-06
## TTC21A 200.930070 -1.056095 0.2744469 9.482389e-06 2.818597e-04
## TTC22 10.088937 -2.207397 1.1975855 3.083984e-03 2.760174e-02
## TTC9 564.656035 -1.184114 0.2904250 2.895816e-06 6.560441e-05
## TTLL9 12.952202 -3.007666 0.9246130 8.037530e-05 1.360717e-03
## TXLNB 21.860723 -1.764167 1.1109646 1.751452e-03 1.747335e-02
## ULBP1 106.521617 -1.287640 0.5315969 7.541028e-04 6.838382e-03
## UNC5CL 30.390153 -1.565238 0.6321671 4.662200e-04 4.076324e-03
## VSIR 3607.232637 -1.185813 0.2426363 6.120407e-08 1.689726e-06
## VWA3A 13.417398 -1.720729 1.4093738 3.532259e-03 3.075140e-02
## VWA7 124.440342 -1.143820 0.4778830 8.398994e-04 7.848568e-03
## WNT9A 305.365558 -1.308239 0.3240479 2.792862e-06 6.236045e-05
## WSCD2 221.008205 -3.542004 0.8847838 2.516624e-07 8.445981e-06
## ZFP36 1341.134892 -1.599692 0.1988275 4.894174e-17 9.547561e-15
## ZNF185 198.557620 -1.443093 0.2934068 5.474695e-08 2.450062e-06
## ZNF442 67.350676 -1.010853 0.4222064 1.095673e-03 9.236041e-03
## ZNF704 683.877892 -1.301101 0.4605183 2.063401e-04 2.315377e-03## remove NA values from results
library(EnhancedVolcano)
res <- results(dds, alpha=0.05, c('condition','healthy_cytokine','healthy_control'))
res1 <- na.omit(res)
## calculate min/max axis values for plot (optional)
min_width <- min(res1$log2FoldChange)
max_width <- max(res1$log2FoldChange)
max_height <- -log10(min(res1[res1$pvalue>0, 5]))
## Grab top 10 up-reg genes for plot
up <- subset(res1, res1$log2FoldChange > 1 & res1$pvalue <= 0.05)
up <- up[order(-up$log2FoldChange),]
up_list <- head(rownames(up), n=10L)
up_list## [1] "CXCL6" "CXCL5" "CXCL8" "C15orf48" "IL6" "MARCOL"
## [7] "KDR" "CXCL3" "CSF3" "CSF2"## Grab top 10 down-reg genes for plot
down <- subset(res1, res1$log2FoldChange < -1 & res1$pvalue <= 0.05)
down <- down[order(down$log2FoldChange),]
down_list <- head(rownames(down), n=10L)
down_list## [1] "KRT223P" "INO80B-WBP1" "FAM90A15P" "C1QTNF8" "FRMD7"
## [6] "MFNG" "C1QTNF7" "CSPG4P13" "KRT4" "KRT24"## place top 20 DE genes in vector (optinal...)
plot_top_20 <- c(up_list, down_list)
plot_top_20## [1] "CXCL6" "CXCL5" "CXCL8" "C15orf48" "IL6"
## [6] "MARCOL" "KDR" "CXCL3" "CSF3" "CSF2"
## [11] "KRT223P" "INO80B-WBP1" "FAM90A15P" "C1QTNF8" "FRMD7"
## [16] "MFNG" "C1QTNF7" "CSPG4P13" "KRT4" "KRT24"EnhancedVolcano(res1,
lab=rownames(res1),
x="log2FoldChange",
y="pvalue",
selectLab=plot_top_20,
drawConnectors=TRUE,
legendPosition = "none",
FCcutoff=1.0,
pCutoff=0.05,
title="Volcano Plot",
subtitle="Healthy Cytokine vs Healthy Control",
caption = paste0('Total Genes = ', nrow(res1)),
xlim=c(-10, 10),
ylim=c(0, max_height))## Warning: ggrepel: 9 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
# without apeglm - not shrinkage
plotMA(h_con_v_h_cyto, ylim=c(-10,10))
# with shrinkage estimator - keep this plot
plotMA(res1, ylim=c(-10,10))
heatmap
# index must match samples you qre plotting
subset <- rld[, 7:12]
# now select de_up, de_down, i.e DE genes that passed the filtering our function produced
up <- rownames(de_up)
down <- rownames(de_down)
# subset matrix to include only DE genes
key <- c(up, down)
subset <- subset[which(rownames(subset) %in% key),]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("forestgreen","blue")
names(col) <- c("Healthy_cytokine", "Healthy_control")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = FALSE,
annotation_col = ann,
annotation_colors = ann_col,
color = hcl.colors(100, "PRGn",rev=F))
heatmap for top20
subset <- rld[, 7:12]
# now select de_up, de_down, i.e DE genes that passed the filtering our function produced
up <- rownames(de_up)
down <- rownames(de_down)
# subset matrix to include only DE genes
key <- c(up, down)
subset <- subset[which(rownames(subset) %in% key),]
mat <- t(subset)
mat <- scale(mat, center=T, scale=T)
mat <- t(mat)
mat <- na.omit(mat)
plot_top_20<-c(up_list,down_list)
top_genes <- mat[which(rownames(mat) %in% plot_top_20),]
# make group
rownames(ann) == rownames(top_genes)## Warning in rownames(ann) == rownames(top_genes): longer object length is not a
## multiple of shorter object length## [1] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
## [13] FALSE#pheatmap::pheatmap(top_genes,
#show_rownames = T,
#annotation_col = ann,
#annotation_colors = ann_col,
#annotation_legend = TRUE,
#legend = TRUE,
#legend_title = "z-score",
#color=hcl.colors(100, 'PRGn',rev=F))
ComplexHeatmap::pheatmap(top_genes,
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
##GO Pathway Read GMT file
# read in gmt file
pathway <- gmtPathways("/Users/aungphyo/Downloads/c5.all.v2023.1.Hs.symbols.gmt.txt")
head(pathway, 1)## $GOBP_MITOCHONDRIAL_GENOME_MAINTENANCE
## [1] "AKT3" "PPARGC1A" "POLG2" "PARP1" "DNA2" "TYMP"
## [7] "FLCN" "PRIMPOL" "ENDOG" "STOX1" "SLC25A4" "LIG3"
## [13] "MEF2A" "MPV17" "OPA1" "RRM2B" "POLG" "SLC25A36"
## [19] "TWNK" "RRM1" "METTL4" "SSBP1" "TOP3A" "TP53"
## [25] "TEFM" "PIF1" "SESN2" "SLC25A33" "DNAJA3" "MGME1"
## [31] "LONP1"Create ranked gene list
Extract the gene names and associated log2FoldChanges from our healthy cytokine vs healthy control study to generate a ranked gene list.
## convert result object to dataframe
res <- as.data.frame(res1)
res$hgnc_symbol <- rownames(res)
# compute summary stat
fgsea_rank <- res %>%
dplyr::select(hgnc_symbol, log2FoldChange) %>%
na.omit() %>%
distinct() %>%
group_by(hgnc_symbol) %>%
summarize(log2foldchange=mean(log2FoldChange))
fgsea_rank## # A tibble: 16,478 × 2
## hgnc_symbol log2foldchange
## <chr> <dbl>
## 1 "" -0.0811
## 2 "A1BG" 0.178
## 3 "A1CF" 0.807
## 4 "A2M" 0.690
## 5 "A2ML1" -0.669
## 6 "A2MP1" 0.232
## 7 "A4GALT" 0.921
## 8 "A4GNT" -0.651
## 9 "AAAS" -0.282
## 10 "AACS" 0.124
## # ℹ 16,468 more rowsConvert to a named list
rank <- deframe(fgsea_rank)
head(rank, 20)## A1BG A1CF A2M A2ML1 A2MP1
## -0.08106658 0.17779131 0.80699938 0.69022080 -0.66934621 0.23223054
## A4GALT A4GNT AAAS AACS AADAT AAGAB
## 0.92105758 -0.65100877 -0.28201115 0.12395885 -0.68486107 0.36251058
## AAK1 AAMDC AAMP AANAT AAR2 AARD
## 0.06013558 -0.29388262 0.10425325 0.16858497 0.05793644 0.77611830
## AARS1 AARS2
## -0.66925235 0.04273303Run fgsea
# run fgsea
fgsea <- fgsea(pathways=pathway, stats=rank, nperm=1000)
fgseaResTidy <- fgsea %>%
as_tibble() %>%
arrange(desc(NES))
# Show in a nice table:
fgseaResTidy %>%
dplyr::select(-leadingEdge, -ES, -nMoreExtreme) %>%
arrange(padj) %>%
DT::datatable()Cluster Profiler of GO Pathway
df <- as.data.frame(res1)
df$hgnc_symbol <- rownames(df)
info <- getBM(attributes=c("hgnc_symbol",
"entrezgene_id"),
filters = c("hgnc_symbol"),
values = df$hgnc_symbol,
mart = mart,
useCache=FALSE)
tmp <- merge(df, info, by="hgnc_symbol")
# subset the dataframe to include only stat sig genes
tmp <- tmp[tmp$padj < 0.05,]OrgDb <- org.Hs.eg.db
geneList <- as.vector(tmp$log2FoldChange)
names(geneList) <- as.character(tmp$entrezgene_id)
gene <- na.omit(as.character(tmp$entrezgene_id))
gene_list<-sort(geneList,decreasing = TRUE)
# GO over-representation test
ego <- clusterProfiler::enrichGO(gene = gene,
OrgDb = OrgDb,
ont = "ALL",
pAdjustMethod = "BH",
pvalueCutoff = 0.05,
qvalueCutoff = 0.01,
readable = TRUE)
#GO gene set enrichment test
#ego3 <- gseGO(geneList = gene_list,
#OrgDb = OrgDb,
#ont = "ALL",
# minGSSize = 100,
#maxGSSize = 500,
# pvalueCutoff = 0.05,
# verbose = FALSE,
#by="fgsea")
#summary(ego3)
summary(ego)## Warning in summary(ego): summary method to convert the object to data.frame is
## deprecated, please use as.data.frame instead.## ONTOLOGY ID
## GO:0006091 BP GO:0006091
## GO:0045333 BP GO:0045333
## GO:0015980 BP GO:0015980
## GO:0046034 BP GO:0046034
## GO:0009060 BP GO:0009060
## GO:0006119 BP GO:0006119
## GO:0030198 BP GO:0030198
## GO:0043062 BP GO:0043062
## GO:0045229 BP GO:0045229
## GO:0022900 BP GO:0022900
## GO:0022904 BP GO:0022904
## GO:0042773 BP GO:0042773
## GO:0042775 BP GO:0042775
## GO:0033108 BP GO:0033108
## GO:0019646 BP GO:0019646
## GO:0006120 BP GO:0006120
## GO:0003018 BP GO:0003018
## GO:0032496 BP GO:0032496
## GO:0010257 BP GO:0010257
## GO:0032981 BP GO:0032981
## GO:0006790 BP GO:0006790
## GO:0009259 BP GO:0009259
## GO:0009117 BP GO:0009117
## GO:0009150 BP GO:0009150
## GO:0006753 BP GO:0006753
## GO:0061448 BP GO:0061448
## GO:0006163 BP GO:0006163
## GO:0019693 BP GO:0019693
## GO:0002237 BP GO:0002237
## GO:1903829 BP GO:1903829
## GO:0009100 BP GO:0009100
## GO:0051223 BP GO:0051223
## GO:0062197 BP GO:0062197
## GO:0071453 BP GO:0071453
## GO:0006090 BP GO:0006090
## GO:0044272 BP GO:0044272
## GO:0051216 BP GO:0051216
## GO:0034976 BP GO:0034976
## GO:1903510 BP GO:1903510
## GO:1904951 BP GO:1904951
## GO:0070482 BP GO:0070482
## GO:0072521 BP GO:0072521
## GO:0010506 BP GO:0010506
## GO:0071496 BP GO:0071496
## GO:0072594 BP GO:0072594
## GO:0033157 BP GO:0033157
## GO:0009101 BP GO:0009101
## GO:0016236 BP GO:0016236
## GO:0071472 BP GO:0071472
## GO:0071384 BP GO:0071384
## GO:2001233 BP GO:2001233
## GO:0006979 BP GO:0006979
## GO:0036293 BP GO:0036293
## GO:1901653 BP GO:1901653
## GO:0060348 BP GO:0060348
## GO:0097191 BP GO:0097191
## GO:0001666 BP GO:0001666
## GO:0052548 BP GO:0052548
## GO:1901652 BP GO:1901652
## GO:0036294 BP GO:0036294
## GO:0002931 BP GO:0002931
## GO:0007249 BP GO:0007249
## GO:0071456 BP GO:0071456
## GO:1901654 BP GO:1901654
## GO:0019751 BP GO:0019751
## GO:0046031 BP GO:0046031
## GO:0097193 BP GO:0097193
## GO:2001236 BP GO:2001236
## GO:0055119 BP GO:0055119
## GO:1903522 BP GO:1903522
## GO:0071549 BP GO:0071549
## GO:0030199 BP GO:0030199
## GO:0032386 BP GO:0032386
## GO:0045862 BP GO:0045862
## GO:0032092 BP GO:0032092
## GO:0071222 BP GO:0071222
## GO:0051881 BP GO:0051881
## GO:0051222 BP GO:0051222
## GO:1900180 BP GO:1900180
## GO:1901617 BP GO:1901617
## GO:0071375 BP GO:0071375
## GO:1900182 BP GO:1900182
## GO:0030203 BP GO:0030203
## GO:0006486 BP GO:0006486
## GO:0043413 BP GO:0043413
## GO:0051767 BP GO:0051767
## GO:0051769 BP GO:0051769
## GO:0052547 BP GO:0052547
## GO:0071385 BP GO:0071385
## GO:0045444 BP GO:0045444
## GO:0006022 BP GO:0006022
## GO:0071219 BP GO:0071219
## GO:0070997 BP GO:0070997
## GO:0090316 BP GO:0090316
## GO:0071621 BP GO:0071621
## GO:0006936 BP GO:0006936
## GO:0046165 BP GO:0046165
## GO:0046173 BP GO:0046173
## GO:0043467 BP GO:0043467
## GO:0001819 BP GO:0001819
## GO:0016241 BP GO:0016241
## GO:0055076 BP GO:0055076
## GO:0034350 BP GO:0034350
## GO:0008637 BP GO:0008637
## GO:0051235 BP GO:0051235
## GO:0003012 BP GO:0003012
## GO:0015986 BP GO:0015986
## GO:0071383 BP GO:0071383
## GO:1901655 BP GO:1901655
## GO:0009135 BP GO:0009135
## GO:0009179 BP GO:0009179
## GO:0006096 BP GO:0006096
## GO:0070085 BP GO:0070085
## GO:0045936 BP GO:0045936
## GO:0009260 BP GO:0009260
## GO:1905952 BP GO:1905952
## GO:0042063 BP GO:0042063
## GO:0010508 BP GO:0010508
## GO:0035966 BP GO:0035966
## GO:0009165 BP GO:0009165
## GO:0010563 BP GO:0010563
## GO:0035296 BP GO:0035296
## GO:0097746 BP GO:0097746
## GO:0031668 BP GO:0031668
## GO:0010498 BP GO:0010498
## GO:2001234 BP GO:2001234
## GO:0061037 BP GO:0061037
## GO:0071548 BP GO:0071548
## GO:0006757 BP GO:0006757
## GO:0043434 BP GO:0043434
## GO:0030595 BP GO:0030595
## GO:0035150 BP GO:0035150
## GO:0090066 BP GO:0090066
## GO:0048545 BP GO:0048545
## GO:0046390 BP GO:0046390
## GO:0003015 BP GO:0003015
## GO:1901293 BP GO:1901293
## GO:0060047 BP GO:0060047
## GO:0072503 BP GO:0072503
## GO:0002062 BP GO:0002062
## GO:0006457 BP GO:0006457
## GO:0046916 BP GO:0046916
## GO:0030593 BP GO:0030593
## GO:0016055 BP GO:0016055
## GO:0097530 BP GO:0097530
## GO:2000116 BP GO:2000116
## GO:0007517 BP GO:0007517
## GO:0010950 BP GO:0010950
## GO:0046513 BP GO:0046513
## GO:0006023 BP GO:0006023
## GO:0198738 BP GO:0198738
## GO:0010038 BP GO:0010038
## GO:0009185 BP GO:0009185
## GO:0071216 BP GO:0071216
## GO:0006024 BP GO:0006024
## GO:0071470 BP GO:0071470
## GO:0050900 BP GO:0050900
## GO:0009152 BP GO:0009152
## GO:0001655 BP GO:0001655
## GO:1904062 BP GO:1904062
## GO:0009612 BP GO:0009612
## GO:0030099 BP GO:0030099
## GO:0032526 BP GO:0032526
## GO:0098657 BP GO:0098657
## GO:0006164 BP GO:0006164
## GO:0010952 BP GO:0010952
## GO:0060485 BP GO:0060485
## GO:0001836 BP GO:0001836
## GO:0050878 BP GO:0050878
## GO:0048705 BP GO:0048705
## GO:0072001 BP GO:0072001
## GO:0032527 BP GO:0032527
## GO:0034764 BP GO:0034764
## GO:0048762 BP GO:0048762
## GO:0006066 BP GO:0006066
## GO:0007033 BP GO:0007033
## GO:0010232 BP GO:0010232
## GO:0150104 BP GO:0150104
## GO:0090257 BP GO:0090257
## GO:1904851 BP GO:1904851
## GO:0006986 BP GO:0006986
## GO:0046661 BP GO:0046661
## GO:0042776 BP GO:0042776
## GO:0006487 BP GO:0006487
## GO:0071260 BP GO:0071260
## GO:0010876 BP GO:0010876
## GO:0006970 BP GO:0006970
## GO:0044106 BP GO:0044106
## GO:0006972 BP GO:0006972
## GO:0034349 BP GO:0034349
## GO:0071474 BP GO:0071474
## GO:0009267 BP GO:0009267
## GO:0019221 BP GO:0019221
## GO:0009308 BP GO:0009308
## GO:0009615 BP GO:0009615
## GO:0034599 BP GO:0034599
## GO:0008016 BP GO:0008016
## GO:0008654 BP GO:0008654
## GO:0042326 BP GO:0042326
## GO:0060349 BP GO:0060349
## GO:0070555 BP GO:0070555
## GO:0106106 BP GO:0106106
## GO:0120161 BP GO:0120161
## GO:0006734 BP GO:0006734
## GO:0051099 BP GO:0051099
## GO:0032331 BP GO:0032331
## GO:0034312 BP GO:0034312
## GO:0043122 BP GO:0043122
## GO:0072522 BP GO:0072522
## GO:1905954 BP GO:1905954
## GO:0071300 BP GO:0071300
## GO:0034612 BP GO:0034612
## GO:0043457 BP GO:0043457
## GO:1901214 BP GO:1901214
## GO:0010001 BP GO:0010001
## GO:0006165 BP GO:0006165
## GO:0031669 BP GO:0031669
## GO:0032368 BP GO:0032368
## GO:0006767 BP GO:0006767
## GO:1990266 BP GO:1990266
## GO:0048872 BP GO:0048872
## GO:0051403 BP GO:0051403
## GO:1902600 BP GO:1902600
## GO:0018126 BP GO:0018126
## GO:2001014 BP GO:2001014
## GO:0062012 BP GO:0062012
## GO:0060326 BP GO:0060326
## GO:0046939 BP GO:0046939
## GO:0031032 BP GO:0031032
## GO:0050920 BP GO:0050920
## GO:0006099 BP GO:0006099
## GO:0034311 BP GO:0034311
## GO:0006576 BP GO:0006576
## GO:0006672 BP GO:0006672
## GO:1902903 BP GO:1902903
## GO:0043270 BP GO:0043270
## GO:0048771 BP GO:0048771
## GO:0120163 BP GO:0120163
## GO:1990845 BP GO:1990845
## GO:0031098 BP GO:0031098
## GO:0051770 BP GO:0051770
## GO:0090075 BP GO:0090075
## GO:0051346 BP GO:0051346
## GO:0016266 BP GO:0016266
## GO:0042401 BP GO:0042401
## GO:0031331 BP GO:0031331
## GO:0044089 BP GO:0044089
## GO:0070203 BP GO:0070203
## GO:1904869 BP GO:1904869
## GO:1904871 BP GO:1904871
## GO:0006596 BP GO:0006596
## GO:0030007 BP GO:0030007
## GO:0098760 BP GO:0098760
## GO:0098761 BP GO:0098761
## GO:0045017 BP GO:0045017
## GO:0046890 BP GO:0046890
## GO:0016311 BP GO:0016311
## GO:0032370 BP GO:0032370
## GO:0032231 BP GO:0032231
## GO:0018208 BP GO:0018208
## GO:0051492 BP GO:0051492
## GO:0110053 BP GO:0110053
## GO:0042060 BP GO:0042060
## GO:0045785 BP GO:0045785
## GO:0000422 BP GO:0000422
## GO:0061726 BP GO:0061726
## GO:0070588 BP GO:0070588
## GO:0044262 BP GO:0044262
## GO:0071731 BP GO:0071731
## GO:0009309 BP GO:0009309
## GO:0061035 BP GO:0061035
## GO:0006839 BP GO:0006839
## GO:0010638 BP GO:0010638
## GO:0001659 BP GO:0001659
## GO:0097529 BP GO:0097529
## GO:0045926 BP GO:0045926
## GO:0002064 BP GO:0002064
## GO:0006754 BP GO:0006754
## GO:0038066 BP GO:0038066
## GO:0060350 BP GO:0060350
## GO:0035107 BP GO:0035107
## GO:0035108 BP GO:0035108
## GO:0010822 BP GO:0010822
## GO:0022411 BP GO:0022411
## GO:0032970 BP GO:0032970
## GO:0006493 BP GO:0006493
## GO:0009199 BP GO:0009199
## GO:0043281 BP GO:0043281
## GO:0006595 BP GO:0006595
## GO:0042339 BP GO:0042339
## GO:0034767 BP GO:0034767
## GO:0046467 BP GO:0046467
## GO:0006874 BP GO:0006874
## GO:0032412 BP GO:0032412
## GO:0055072 BP GO:0055072
## GO:0048538 BP GO:0048538
## GO:0021602 BP GO:0021602
## GO:0032869 BP GO:0032869
## GO:0071559 BP GO:0071559
## GO:0055074 BP GO:0055074
## GO:0042176 BP GO:0042176
## GO:0030178 BP GO:0030178
## GO:0043254 BP GO:0043254
## GO:0008207 BP GO:0008207
## GO:0045454 BP GO:0045454
## GO:0098798 CC GO:0098798
## GO:0005743 CC GO:0005743
## GO:0098800 CC GO:0098800
## GO:0000502 CC GO:0000502
## GO:1905369 CC GO:1905369
## GO:0070469 CC GO:0070469
## GO:0005746 CC GO:0005746
## GO:0098803 CC GO:0098803
## GO:1905368 CC GO:1905368
## GO:0005839 CC GO:0005839
## GO:0005788 CC GO:0005788
## GO:1990204 CC GO:1990204
## GO:0005747 CC GO:0005747
## GO:0030964 CC GO:0030964
## GO:0045271 CC GO:0045271
## GO:0019867 CC GO:0019867
## GO:0062023 CC GO:0062023
## GO:0016469 CC GO:0016469
## GO:0031300 CC GO:0031300
## GO:0031968 CC GO:0031968
## GO:0005741 CC GO:0005741
## GO:0005759 CC GO:0005759
## GO:0031301 CC GO:0031301
## GO:0019774 CC GO:0019774
## GO:0005604 CC GO:0005604
## GO:0140534 CC GO:0140534
## GO:0031228 CC GO:0031228
## GO:0022624 CC GO:0022624
## GO:0005753 CC GO:0005753
## GO:0030173 CC GO:0030173
## GO:0045259 CC GO:0045259
## GO:0042383 CC GO:0042383
## GO:0005838 CC GO:0005838
## GO:0015629 CC GO:0015629
## GO:1990351 CC GO:1990351
## GO:0033177 CC GO:0033177
## GO:0042470 CC GO:0042470
## GO:0048770 CC GO:0048770
## GO:0033176 CC GO:0033176
## GO:0005774 CC GO:0005774
## GO:0005581 CC GO:0005581
## GO:0034774 CC GO:0034774
## GO:0005758 CC GO:0005758
## GO:0060205 CC GO:0060205
## GO:0031970 CC GO:0031970
## GO:0045121 CC GO:0045121
## GO:0031983 CC GO:0031983
## GO:0098857 CC GO:0098857
## GO:0001726 CC GO:0001726
## GO:0098573 CC GO:0098573
## GO:0033178 CC GO:0033178
## GO:1904813 CC GO:1904813
## GO:0005832 CC GO:0005832
## GO:0045277 CC GO:0045277
## GO:0005751 CC GO:0005751
## GO:0016471 CC GO:0016471
## GO:1902495 CC GO:1902495
## GO:0098644 CC GO:0098644
## GO:0005766 CC GO:0005766
## GO:0042582 CC GO:0042582
## GO:0000314 CC GO:0000314
## GO:0005763 CC GO:0005763
## GO:0070069 CC GO:0070069
## GO:0005938 CC GO:0005938
## GO:0031227 CC GO:0031227
## GO:0032592 CC GO:0032592
## GO:0015399 MF GO:0015399
## GO:0009055 MF GO:0009055
## GO:0015453 MF GO:0015453
## GO:0016655 MF GO:0016655
## GO:0005201 MF GO:0005201
## GO:0003954 MF GO:0003954
## GO:0008137 MF GO:0008137
## GO:0050136 MF GO:0050136
## GO:0003955 MF GO:0003955
## GO:0022804 MF GO:0022804
## GO:0004298 MF GO:0004298
## GO:0016651 MF GO:0016651
## GO:0015036 MF GO:0015036
## GO:0016667 MF GO:0016667
## GO:0015078 MF GO:0015078
## GO:0008201 MF GO:0008201
## GO:0019829 MF GO:0019829
## GO:0015035 MF GO:0015035
## GO:0070003 MF GO:0070003
## GO:0030020 MF GO:0030020
## GO:0016853 MF GO:0016853
## GO:0046933 MF GO:0046933
## GO:0005539 MF GO:0005539
## GO:0016829 MF GO:0016829
## GO:0016758 MF GO:0016758
## GO:0042626 MF GO:0042626
## Description
## GO:0006091 generation of precursor metabolites and energy
## GO:0045333 cellular respiration
## GO:0015980 energy derivation by oxidation of organic compounds
## GO:0046034 ATP metabolic process
## GO:0009060 aerobic respiration
## GO:0006119 oxidative phosphorylation
## GO:0030198 extracellular matrix organization
## GO:0043062 extracellular structure organization
## GO:0045229 external encapsulating structure organization
## GO:0022900 electron transport chain
## GO:0022904 respiratory electron transport chain
## GO:0042773 ATP synthesis coupled electron transport
## GO:0042775 mitochondrial ATP synthesis coupled electron transport
## GO:0033108 mitochondrial respiratory chain complex assembly
## GO:0019646 aerobic electron transport chain
## GO:0006120 mitochondrial electron transport, NADH to ubiquinone
## GO:0003018 vascular process in circulatory system
## GO:0032496 response to lipopolysaccharide
## GO:0010257 NADH dehydrogenase complex assembly
## GO:0032981 mitochondrial respiratory chain complex I assembly
## GO:0006790 sulfur compound metabolic process
## GO:0009259 ribonucleotide metabolic process
## GO:0009117 nucleotide metabolic process
## GO:0009150 purine ribonucleotide metabolic process
## GO:0006753 nucleoside phosphate metabolic process
## GO:0061448 connective tissue development
## GO:0006163 purine nucleotide metabolic process
## GO:0019693 ribose phosphate metabolic process
## GO:0002237 response to molecule of bacterial origin
## GO:1903829 positive regulation of protein localization
## GO:0009100 glycoprotein metabolic process
## GO:0051223 regulation of protein transport
## GO:0062197 cellular response to chemical stress
## GO:0071453 cellular response to oxygen levels
## GO:0006090 pyruvate metabolic process
## GO:0044272 sulfur compound biosynthetic process
## GO:0051216 cartilage development
## GO:0034976 response to endoplasmic reticulum stress
## GO:1903510 mucopolysaccharide metabolic process
## GO:1904951 positive regulation of establishment of protein localization
## GO:0070482 response to oxygen levels
## GO:0072521 purine-containing compound metabolic process
## GO:0010506 regulation of autophagy
## GO:0071496 cellular response to external stimulus
## GO:0072594 establishment of protein localization to organelle
## GO:0033157 regulation of intracellular protein transport
## GO:0009101 glycoprotein biosynthetic process
## GO:0016236 macroautophagy
## GO:0071472 cellular response to salt stress
## GO:0071384 cellular response to corticosteroid stimulus
## GO:2001233 regulation of apoptotic signaling pathway
## GO:0006979 response to oxidative stress
## GO:0036293 response to decreased oxygen levels
## GO:1901653 cellular response to peptide
## GO:0060348 bone development
## GO:0097191 extrinsic apoptotic signaling pathway
## GO:0001666 response to hypoxia
## GO:0052548 regulation of endopeptidase activity
## GO:1901652 response to peptide
## GO:0036294 cellular response to decreased oxygen levels
## GO:0002931 response to ischemia
## GO:0007249 I-kappaB kinase/NF-kappaB signaling
## GO:0071456 cellular response to hypoxia
## GO:1901654 response to ketone
## GO:0019751 polyol metabolic process
## GO:0046031 ADP metabolic process
## GO:0097193 intrinsic apoptotic signaling pathway
## GO:2001236 regulation of extrinsic apoptotic signaling pathway
## GO:0055119 relaxation of cardiac muscle
## GO:1903522 regulation of blood circulation
## GO:0071549 cellular response to dexamethasone stimulus
## GO:0030199 collagen fibril organization
## GO:0032386 regulation of intracellular transport
## GO:0045862 positive regulation of proteolysis
## GO:0032092 positive regulation of protein binding
## GO:0071222 cellular response to lipopolysaccharide
## GO:0051881 regulation of mitochondrial membrane potential
## GO:0051222 positive regulation of protein transport
## GO:1900180 regulation of protein localization to nucleus
## GO:1901617 organic hydroxy compound biosynthetic process
## GO:0071375 cellular response to peptide hormone stimulus
## GO:1900182 positive regulation of protein localization to nucleus
## GO:0030203 glycosaminoglycan metabolic process
## GO:0006486 protein glycosylation
## GO:0043413 macromolecule glycosylation
## GO:0051767 nitric-oxide synthase biosynthetic process
## GO:0051769 regulation of nitric-oxide synthase biosynthetic process
## GO:0052547 regulation of peptidase activity
## GO:0071385 cellular response to glucocorticoid stimulus
## GO:0045444 fat cell differentiation
## GO:0006022 aminoglycan metabolic process
## GO:0071219 cellular response to molecule of bacterial origin
## GO:0070997 neuron death
## GO:0090316 positive regulation of intracellular protein transport
## GO:0071621 granulocyte chemotaxis
## GO:0006936 muscle contraction
## GO:0046165 alcohol biosynthetic process
## GO:0046173 polyol biosynthetic process
## GO:0043467 regulation of generation of precursor metabolites and energy
## GO:0001819 positive regulation of cytokine production
## GO:0016241 regulation of macroautophagy
## GO:0055076 transition metal ion homeostasis
## GO:0034350 regulation of glial cell apoptotic process
## GO:0008637 apoptotic mitochondrial changes
## GO:0051235 maintenance of location
## GO:0003012 muscle system process
## GO:0015986 proton motive force-driven ATP synthesis
## GO:0071383 cellular response to steroid hormone stimulus
## GO:1901655 cellular response to ketone
## GO:0009135 purine nucleoside diphosphate metabolic process
## GO:0009179 purine ribonucleoside diphosphate metabolic process
## GO:0006096 glycolytic process
## GO:0070085 glycosylation
## GO:0045936 negative regulation of phosphate metabolic process
## GO:0009260 ribonucleotide biosynthetic process
## GO:1905952 regulation of lipid localization
## GO:0042063 gliogenesis
## GO:0010508 positive regulation of autophagy
## GO:0035966 response to topologically incorrect protein
## GO:0009165 nucleotide biosynthetic process
## GO:0010563 negative regulation of phosphorus metabolic process
## GO:0035296 regulation of tube diameter
## GO:0097746 blood vessel diameter maintenance
## GO:0031668 cellular response to extracellular stimulus
## GO:0010498 proteasomal protein catabolic process
## GO:2001234 negative regulation of apoptotic signaling pathway
## GO:0061037 negative regulation of cartilage development
## GO:0071548 response to dexamethasone
## GO:0006757 ATP generation from ADP
## GO:0043434 response to peptide hormone
## GO:0030595 leukocyte chemotaxis
## GO:0035150 regulation of tube size
## GO:0090066 regulation of anatomical structure size
## GO:0048545 response to steroid hormone
## GO:0046390 ribose phosphate biosynthetic process
## GO:0003015 heart process
## GO:1901293 nucleoside phosphate biosynthetic process
## GO:0060047 heart contraction
## GO:0072503 cellular divalent inorganic cation homeostasis
## GO:0002062 chondrocyte differentiation
## GO:0006457 protein folding
## GO:0046916 cellular transition metal ion homeostasis
## GO:0030593 neutrophil chemotaxis
## GO:0016055 Wnt signaling pathway
## GO:0097530 granulocyte migration
## GO:2000116 regulation of cysteine-type endopeptidase activity
## GO:0007517 muscle organ development
## GO:0010950 positive regulation of endopeptidase activity
## GO:0046513 ceramide biosynthetic process
## GO:0006023 aminoglycan biosynthetic process
## GO:0198738 cell-cell signaling by wnt
## GO:0010038 response to metal ion
## GO:0009185 ribonucleoside diphosphate metabolic process
## GO:0071216 cellular response to biotic stimulus
## GO:0006024 glycosaminoglycan biosynthetic process
## GO:0071470 cellular response to osmotic stress
## GO:0050900 leukocyte migration
## GO:0009152 purine ribonucleotide biosynthetic process
## GO:0001655 urogenital system development
## GO:1904062 regulation of cation transmembrane transport
## GO:0009612 response to mechanical stimulus
## GO:0030099 myeloid cell differentiation
## GO:0032526 response to retinoic acid
## GO:0098657 import into cell
## GO:0006164 purine nucleotide biosynthetic process
## GO:0010952 positive regulation of peptidase activity
## GO:0060485 mesenchyme development
## GO:0001836 release of cytochrome c from mitochondria
## GO:0050878 regulation of body fluid levels
## GO:0048705 skeletal system morphogenesis
## GO:0072001 renal system development
## GO:0032527 protein exit from endoplasmic reticulum
## GO:0034764 positive regulation of transmembrane transport
## GO:0048762 mesenchymal cell differentiation
## GO:0006066 alcohol metabolic process
## GO:0007033 vacuole organization
## GO:0010232 vascular transport
## GO:0150104 transport across blood-brain barrier
## GO:0090257 regulation of muscle system process
## GO:1904851 positive regulation of establishment of protein localization to telomere
## GO:0006986 response to unfolded protein
## GO:0046661 male sex differentiation
## GO:0042776 proton motive force-driven mitochondrial ATP synthesis
## GO:0006487 protein N-linked glycosylation
## GO:0071260 cellular response to mechanical stimulus
## GO:0010876 lipid localization
## GO:0006970 response to osmotic stress
## GO:0044106 cellular amine metabolic process
## GO:0006972 hyperosmotic response
## GO:0034349 glial cell apoptotic process
## GO:0071474 cellular hyperosmotic response
## GO:0009267 cellular response to starvation
## GO:0019221 cytokine-mediated signaling pathway
## GO:0009308 amine metabolic process
## GO:0009615 response to virus
## GO:0034599 cellular response to oxidative stress
## GO:0008016 regulation of heart contraction
## GO:0008654 phospholipid biosynthetic process
## GO:0042326 negative regulation of phosphorylation
## GO:0060349 bone morphogenesis
## GO:0070555 response to interleukin-1
## GO:0106106 cold-induced thermogenesis
## GO:0120161 regulation of cold-induced thermogenesis
## GO:0006734 NADH metabolic process
## GO:0051099 positive regulation of binding
## GO:0032331 negative regulation of chondrocyte differentiation
## GO:0034312 diol biosynthetic process
## GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling
## GO:0072522 purine-containing compound biosynthetic process
## GO:1905954 positive regulation of lipid localization
## GO:0071300 cellular response to retinoic acid
## GO:0034612 response to tumor necrosis factor
## GO:0043457 regulation of cellular respiration
## GO:1901214 regulation of neuron death
## GO:0010001 glial cell differentiation
## GO:0006165 nucleoside diphosphate phosphorylation
## GO:0031669 cellular response to nutrient levels
## GO:0032368 regulation of lipid transport
## GO:0006767 water-soluble vitamin metabolic process
## GO:1990266 neutrophil migration
## GO:0048872 homeostasis of number of cells
## GO:0051403 stress-activated MAPK cascade
## GO:1902600 proton transmembrane transport
## GO:0018126 protein hydroxylation
## GO:2001014 regulation of skeletal muscle cell differentiation
## GO:0062012 regulation of small molecule metabolic process
## GO:0060326 cell chemotaxis
## GO:0046939 nucleotide phosphorylation
## GO:0031032 actomyosin structure organization
## GO:0050920 regulation of chemotaxis
## GO:0006099 tricarboxylic acid cycle
## GO:0034311 diol metabolic process
## GO:0006576 cellular biogenic amine metabolic process
## GO:0006672 ceramide metabolic process
## GO:1902903 regulation of supramolecular fiber organization
## GO:0043270 positive regulation of ion transport
## GO:0048771 tissue remodeling
## GO:0120163 negative regulation of cold-induced thermogenesis
## GO:1990845 adaptive thermogenesis
## GO:0031098 stress-activated protein kinase signaling cascade
## GO:0051770 positive regulation of nitric-oxide synthase biosynthetic process
## GO:0090075 relaxation of muscle
## GO:0051346 negative regulation of hydrolase activity
## GO:0016266 O-glycan processing
## GO:0042401 cellular biogenic amine biosynthetic process
## GO:0031331 positive regulation of cellular catabolic process
## GO:0044089 positive regulation of cellular component biogenesis
## GO:0070203 regulation of establishment of protein localization to telomere
## GO:1904869 regulation of protein localization to Cajal body
## GO:1904871 positive regulation of protein localization to Cajal body
## GO:0006596 polyamine biosynthetic process
## GO:0030007 cellular potassium ion homeostasis
## GO:0098760 response to interleukin-7
## GO:0098761 cellular response to interleukin-7
## GO:0045017 glycerolipid biosynthetic process
## GO:0046890 regulation of lipid biosynthetic process
## GO:0016311 dephosphorylation
## GO:0032370 positive regulation of lipid transport
## GO:0032231 regulation of actin filament bundle assembly
## GO:0018208 peptidyl-proline modification
## GO:0051492 regulation of stress fiber assembly
## GO:0110053 regulation of actin filament organization
## GO:0042060 wound healing
## GO:0045785 positive regulation of cell adhesion
## GO:0000422 autophagy of mitochondrion
## GO:0061726 mitochondrion disassembly
## GO:0070588 calcium ion transmembrane transport
## GO:0044262 cellular carbohydrate metabolic process
## GO:0071731 response to nitric oxide
## GO:0009309 amine biosynthetic process
## GO:0061035 regulation of cartilage development
## GO:0006839 mitochondrial transport
## GO:0010638 positive regulation of organelle organization
## GO:0001659 temperature homeostasis
## GO:0097529 myeloid leukocyte migration
## GO:0045926 negative regulation of growth
## GO:0002064 epithelial cell development
## GO:0006754 ATP biosynthetic process
## GO:0038066 p38MAPK cascade
## GO:0060350 endochondral bone morphogenesis
## GO:0035107 appendage morphogenesis
## GO:0035108 limb morphogenesis
## GO:0010822 positive regulation of mitochondrion organization
## GO:0022411 cellular component disassembly
## GO:0032970 regulation of actin filament-based process
## GO:0006493 protein O-linked glycosylation
## GO:0009199 ribonucleoside triphosphate metabolic process
## GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process
## GO:0006595 polyamine metabolic process
## GO:0042339 keratan sulfate metabolic process
## GO:0034767 positive regulation of ion transmembrane transport
## GO:0046467 membrane lipid biosynthetic process
## GO:0006874 cellular calcium ion homeostasis
## GO:0032412 regulation of ion transmembrane transporter activity
## GO:0055072 iron ion homeostasis
## GO:0048538 thymus development
## GO:0021602 cranial nerve morphogenesis
## GO:0032869 cellular response to insulin stimulus
## GO:0071559 response to transforming growth factor beta
## GO:0055074 calcium ion homeostasis
## GO:0042176 regulation of protein catabolic process
## GO:0030178 negative regulation of Wnt signaling pathway
## GO:0043254 regulation of protein-containing complex assembly
## GO:0008207 C21-steroid hormone metabolic process
## GO:0045454 cell redox homeostasis
## GO:0098798 mitochondrial protein-containing complex
## GO:0005743 mitochondrial inner membrane
## GO:0098800 inner mitochondrial membrane protein complex
## GO:0000502 proteasome complex
## GO:1905369 endopeptidase complex
## GO:0070469 respirasome
## GO:0005746 mitochondrial respirasome
## GO:0098803 respiratory chain complex
## GO:1905368 peptidase complex
## GO:0005839 proteasome core complex
## GO:0005788 endoplasmic reticulum lumen
## GO:1990204 oxidoreductase complex
## GO:0005747 mitochondrial respiratory chain complex I
## GO:0030964 NADH dehydrogenase complex
## GO:0045271 respiratory chain complex I
## GO:0019867 outer membrane
## GO:0062023 collagen-containing extracellular matrix
## GO:0016469 proton-transporting two-sector ATPase complex
## GO:0031300 intrinsic component of organelle membrane
## GO:0031968 organelle outer membrane
## GO:0005741 mitochondrial outer membrane
## GO:0005759 mitochondrial matrix
## GO:0031301 integral component of organelle membrane
## GO:0019774 proteasome core complex, beta-subunit complex
## GO:0005604 basement membrane
## GO:0140534 endoplasmic reticulum protein-containing complex
## GO:0031228 intrinsic component of Golgi membrane
## GO:0022624 proteasome accessory complex
## GO:0005753 mitochondrial proton-transporting ATP synthase complex
## GO:0030173 integral component of Golgi membrane
## GO:0045259 proton-transporting ATP synthase complex
## GO:0042383 sarcolemma
## GO:0005838 proteasome regulatory particle
## GO:0015629 actin cytoskeleton
## GO:1990351 transporter complex
## GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
## GO:0042470 melanosome
## GO:0048770 pigment granule
## GO:0033176 proton-transporting V-type ATPase complex
## GO:0005774 vacuolar membrane
## GO:0005581 collagen trimer
## GO:0034774 secretory granule lumen
## GO:0005758 mitochondrial intermembrane space
## GO:0060205 cytoplasmic vesicle lumen
## GO:0031970 organelle envelope lumen
## GO:0045121 membrane raft
## GO:0031983 vesicle lumen
## GO:0098857 membrane microdomain
## GO:0001726 ruffle
## GO:0098573 intrinsic component of mitochondrial membrane
## GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain
## GO:1904813 ficolin-1-rich granule lumen
## GO:0005832 chaperonin-containing T-complex
## GO:0045277 respiratory chain complex IV
## GO:0005751 mitochondrial respiratory chain complex IV
## GO:0016471 vacuolar proton-transporting V-type ATPase complex
## GO:1902495 transmembrane transporter complex
## GO:0098644 complex of collagen trimers
## GO:0005766 primary lysosome
## GO:0042582 azurophil granule
## GO:0000314 organellar small ribosomal subunit
## GO:0005763 mitochondrial small ribosomal subunit
## GO:0070069 cytochrome complex
## GO:0005938 cell cortex
## GO:0031227 intrinsic component of endoplasmic reticulum membrane
## GO:0032592 integral component of mitochondrial membrane
## GO:0015399 primary active transmembrane transporter activity
## GO:0009055 electron transfer activity
## GO:0015453 oxidoreduction-driven active transmembrane transporter activity
## GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
## GO:0005201 extracellular matrix structural constituent
## GO:0003954 NADH dehydrogenase activity
## GO:0008137 NADH dehydrogenase (ubiquinone) activity
## GO:0050136 NADH dehydrogenase (quinone) activity
## GO:0003955 NAD(P)H dehydrogenase (quinone) activity
## GO:0022804 active transmembrane transporter activity
## GO:0004298 threonine-type endopeptidase activity
## GO:0016651 oxidoreductase activity, acting on NAD(P)H
## GO:0015036 disulfide oxidoreductase activity
## GO:0016667 oxidoreductase activity, acting on a sulfur group of donors
## GO:0015078 proton transmembrane transporter activity
## GO:0008201 heparin binding
## GO:0019829 ATPase-coupled cation transmembrane transporter activity
## GO:0015035 protein-disulfide reductase activity
## GO:0070003 threonine-type peptidase activity
## GO:0030020 extracellular matrix structural constituent conferring tensile strength
## GO:0016853 isomerase activity
## GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
## GO:0005539 glycosaminoglycan binding
## GO:0016829 lyase activity
## GO:0016758 hexosyltransferase activity
## GO:0042626 ATPase-coupled transmembrane transporter activity
## GeneRatio BgRatio pvalue p.adjust qvalue
## GO:0006091 152/2840 494/18800 3.830606e-19 2.371528e-15 1.894739e-15
## GO:0045333 87/2840 231/18800 2.702577e-17 8.365827e-14 6.683900e-14
## GO:0015980 108/2840 321/18800 5.827814e-17 1.202667e-13 9.608737e-14
## GO:0046034 94/2840 273/18800 1.187700e-15 1.838263e-12 1.468685e-12
## GO:0009060 71/2840 187/18800 1.400398e-14 1.733972e-11 1.385362e-11
## GO:0006119 57/2840 139/18800 1.219898e-13 1.258732e-10 1.005667e-10
## GO:0030198 95/2840 307/18800 1.306356e-12 1.155379e-09 9.230931e-10
## GO:0043062 95/2840 308/18800 1.613309e-12 1.248499e-09 9.974917e-10
## GO:0045229 95/2840 310/18800 2.449928e-12 1.685278e-09 1.346457e-09
## GO:0022900 61/2840 167/18800 6.952868e-12 4.304521e-09 3.439108e-09
## GO:0022904 46/2840 113/18800 3.738928e-11 2.104337e-08 1.681265e-08
## GO:0042773 39/2840 92/18800 2.698347e-10 1.285036e-07 1.026683e-07
## GO:0042775 39/2840 92/18800 2.698347e-10 1.285036e-07 1.026683e-07
## GO:0033108 39/2840 94/18800 5.807184e-10 2.568020e-07 2.051726e-07
## GO:0019646 36/2840 84/18800 9.034636e-10 3.728895e-07 2.979211e-07
## GO:0006120 26/2840 51/18800 2.100121e-09 8.126155e-07 6.492413e-07
## GO:0003018 76/2840 263/18800 6.972898e-09 2.539365e-06 2.028833e-06
## GO:0032496 90/2840 333/18800 1.128920e-08 3.882857e-06 3.102219e-06
## GO:0010257 27/2840 58/18800 1.306827e-08 3.951698e-06 3.157220e-06
## GO:0032981 27/2840 58/18800 1.306827e-08 3.951698e-06 3.157220e-06
## GO:0006790 91/2840 339/18800 1.340424e-08 3.951698e-06 3.157220e-06
## GO:0009259 99/2840 384/18800 2.912965e-08 8.197348e-06 6.549293e-06
## GO:0009117 119/2840 487/18800 3.294772e-08 8.868668e-06 7.085645e-06
## GO:0009150 95/2840 366/18800 3.886585e-08 1.002577e-05 8.010115e-06
## GO:0006753 120/2840 495/18800 4.626431e-08 1.145689e-05 9.153515e-06
## GO:0061448 73/2840 260/18800 5.072346e-08 1.207804e-05 9.649780e-06
## GO:0006163 100/2840 394/18800 5.751441e-08 1.271685e-05 1.016016e-05
## GO:0019693 100/2840 394/18800 5.751441e-08 1.271685e-05 1.016016e-05
## GO:0002237 92/2840 354/18800 5.956940e-08 1.271704e-05 1.016031e-05
## GO:1903829 110/2840 446/18800 6.478431e-08 1.336932e-05 1.068146e-05
## GO:0009100 98/2840 386/18800 7.660987e-08 1.529973e-05 1.222376e-05
## GO:0051223 119/2840 495/18800 8.566081e-08 1.657269e-05 1.324079e-05
## GO:0062197 87/2840 332/18800 9.079842e-08 1.703433e-05 1.360963e-05
## GO:0071453 52/2840 166/18800 9.781751e-08 1.781142e-05 1.423048e-05
## GO:0006090 38/2840 106/18800 1.078953e-07 1.908513e-05 1.524812e-05
## GO:0044272 48/2840 149/18800 1.160604e-07 1.995917e-05 1.594643e-05
## GO:0051216 58/2840 195/18800 1.388323e-07 2.323002e-05 1.855969e-05
## GO:0034976 71/2840 257/18800 1.539454e-07 2.508095e-05 2.003849e-05
## GO:1903510 33/2840 88/18800 2.169648e-07 3.444177e-05 2.751734e-05
## GO:1904951 81/2840 309/18800 2.456534e-07 3.731412e-05 2.981222e-05
## GO:0070482 84/2840 324/18800 2.471134e-07 3.731412e-05 2.981222e-05
## GO:0072521 102/2840 416/18800 2.618103e-07 3.859209e-05 3.083325e-05
## GO:0010506 86/2840 336/18800 3.249244e-07 4.678155e-05 3.737625e-05
## GO:0071496 80/2840 309/18800 5.030124e-07 7.077613e-05 5.654677e-05
## GO:0072594 103/2840 431/18800 8.404994e-07 1.154102e-04 9.220727e-05
## GO:0033157 62/2840 224/18800 8.575138e-07 1.154102e-04 9.220727e-05
## GO:0009101 80/2840 316/18800 1.318709e-06 1.728127e-04 1.380692e-04
## GO:0016236 78/2840 306/18800 1.339850e-06 1.728127e-04 1.380692e-04
## GO:0071472 9/2840 11/18800 1.665984e-06 2.104920e-04 1.681732e-04
## GO:0071384 24/2840 59/18800 1.766999e-06 2.187899e-04 1.748027e-04
## GO:2001233 90/2840 370/18800 1.862212e-06 2.260579e-04 1.806095e-04
## GO:0006979 102/2840 433/18800 1.905727e-06 2.268915e-04 1.812755e-04
## GO:0036293 76/2840 299/18800 2.042664e-06 2.386062e-04 1.906351e-04
## GO:1901653 88/2840 361/18800 2.196146e-06 2.491296e-04 1.990428e-04
## GO:0060348 61/2840 225/18800 2.213234e-06 2.491296e-04 1.990428e-04
## GO:0097191 60/2840 221/18800 2.541527e-06 2.809748e-04 2.244856e-04
## GO:0001666 73/2840 286/18800 2.737474e-06 2.973281e-04 2.375510e-04
## GO:0052548 100/2840 426/18800 2.822214e-06 3.012470e-04 2.406821e-04
## GO:1901652 112/2840 491/18800 3.136115e-06 3.216840e-04 2.570103e-04
## GO:0036294 45/2840 151/18800 3.167834e-06 3.216840e-04 2.570103e-04
## GO:0002931 22/2840 53/18800 3.169556e-06 3.216840e-04 2.570103e-04
## GO:0007249 73/2840 288/18800 3.590480e-06 3.585268e-04 2.864460e-04
## GO:0071456 43/2840 143/18800 4.020494e-06 3.856275e-04 3.080981e-04
## GO:1901654 53/2840 190/18800 4.043033e-06 3.856275e-04 3.080981e-04
## GO:0019751 37/2840 116/18800 4.091306e-06 3.856275e-04 3.080981e-04
## GO:0046031 31/2840 90/18800 4.111034e-06 3.856275e-04 3.080981e-04
## GO:0097193 74/2840 295/18800 4.632847e-06 4.199925e-04 3.355541e-04
## GO:2001236 45/2840 153/18800 4.664559e-06 4.199925e-04 3.355541e-04
## GO:0055119 11/2840 17/18800 4.680905e-06 4.199925e-04 3.355541e-04
## GO:1903522 67/2840 260/18800 4.886942e-06 4.295145e-04 3.431617e-04
## GO:0071549 14/2840 26/18800 4.968478e-06 4.295145e-04 3.431617e-04
## GO:0030199 24/2840 62/18800 4.995161e-06 4.295145e-04 3.431617e-04
## GO:0032386 81/2840 332/18800 5.292326e-06 4.488327e-04 3.585961e-04
## GO:0045862 88/2840 369/18800 5.641421e-06 4.719735e-04 3.770845e-04
## GO:0032092 29/2840 83/18800 6.032704e-06 4.979796e-04 3.978621e-04
## GO:0071222 58/2840 217/18800 6.270172e-06 5.107715e-04 4.080822e-04
## GO:0051881 26/2840 71/18800 6.793098e-06 5.461827e-04 4.363741e-04
## GO:0051222 73/2840 293/18800 6.932409e-06 5.475790e-04 4.374897e-04
## GO:1900180 40/2840 132/18800 6.987359e-06 5.475790e-04 4.374897e-04
## GO:1901617 63/2840 243/18800 7.501616e-06 5.805313e-04 4.638170e-04
## GO:0071375 73/2840 294/18800 7.880594e-06 5.960450e-04 4.762117e-04
## GO:1900182 29/2840 84/18800 7.894635e-06 5.960450e-04 4.762117e-04
## GO:0030203 37/2840 120/18800 9.818877e-06 7.224725e-04 5.772213e-04
## GO:0006486 59/2840 225/18800 9.919263e-06 7.224725e-04 5.772213e-04
## GO:0043413 59/2840 225/18800 9.919263e-06 7.224725e-04 5.772213e-04
## GO:0051767 12/2840 21/18800 1.064854e-05 7.577598e-04 6.054142e-04
## GO:0051769 12/2840 21/18800 1.064854e-05 7.577598e-04 6.054142e-04
## GO:0052547 103/2840 456/18800 1.200183e-05 8.443557e-04 6.746002e-04
## GO:0071385 21/2840 53/18800 1.260899e-05 8.771041e-04 7.007647e-04
## GO:0045444 61/2840 237/18800 1.323350e-05 9.103177e-04 7.273007e-04
## GO:0006022 39/2840 131/18800 1.433221e-05 9.750626e-04 7.790288e-04
## GO:0071219 59/2840 229/18800 1.760869e-05 1.184950e-03 9.467188e-04
## GO:0070997 83/2840 353/18800 1.796442e-05 1.195889e-03 9.554589e-04
## GO:0090316 44/2840 156/18800 1.902158e-05 1.252794e-03 1.000923e-03
## GO:0071621 38/2840 128/18800 1.968613e-05 1.282914e-03 1.024988e-03
## GO:0006936 82/2840 349/18800 2.069000e-05 1.334289e-03 1.066034e-03
## GO:0046165 41/2840 143/18800 2.365542e-05 1.509801e-03 1.206260e-03
## GO:0046173 23/2840 63/18800 2.405678e-05 1.519751e-03 1.214209e-03
## GO:0043467 39/2840 134/18800 2.546308e-05 1.592343e-03 1.272206e-03
## GO:0001819 105/2840 475/18800 2.597984e-05 1.608412e-03 1.285045e-03
## GO:0016241 44/2840 158/18800 2.681812e-05 1.634989e-03 1.306279e-03
## GO:0055076 40/2840 139/18800 2.693731e-05 1.634989e-03 1.306279e-03
## GO:0034350 8/2840 11/18800 2.884893e-05 1.707277e-03 1.364033e-03
## GO:0008637 33/2840 107/18800 2.887308e-05 1.707277e-03 1.364033e-03
## GO:0051235 78/2840 331/18800 2.919551e-05 1.707277e-03 1.364033e-03
## GO:0003012 100/2840 449/18800 2.923135e-05 1.707277e-03 1.364033e-03
## GO:0015986 13/2840 26/18800 3.096786e-05 1.785208e-03 1.426296e-03
## GO:0071383 53/2840 203/18800 3.114237e-05 1.785208e-03 1.426296e-03
## GO:1901655 30/2840 94/18800 3.182284e-05 1.797795e-03 1.436353e-03
## GO:0009135 32/2840 103/18800 3.223312e-05 1.797795e-03 1.436353e-03
## GO:0009179 32/2840 103/18800 3.223312e-05 1.797795e-03 1.436353e-03
## GO:0006096 27/2840 81/18800 3.290472e-05 1.818867e-03 1.453189e-03
## GO:0070085 61/2840 244/18800 3.407275e-05 1.866765e-03 1.491457e-03
## GO:0045936 98/2840 440/18800 3.490050e-05 1.891220e-03 1.510995e-03
## GO:0009260 49/2840 184/18800 3.513007e-05 1.891220e-03 1.510995e-03
## GO:1905952 43/2840 155/18800 3.636414e-05 1.930327e-03 1.542240e-03
## GO:0042063 70/2840 291/18800 3.651281e-05 1.930327e-03 1.542240e-03
## GO:0010508 39/2840 136/18800 3.679188e-05 1.930327e-03 1.542240e-03
## GO:0035966 44/2840 160/18800 3.744982e-05 1.933620e-03 1.544871e-03
## GO:0009165 63/2840 255/18800 3.756503e-05 1.933620e-03 1.544871e-03
## GO:0010563 98/2840 441/18800 3.833284e-05 1.933620e-03 1.544871e-03
## GO:0035296 40/2840 141/18800 3.857641e-05 1.933620e-03 1.544871e-03
## GO:0097746 40/2840 141/18800 3.857641e-05 1.933620e-03 1.544871e-03
## GO:0031668 61/2840 245/18800 3.878874e-05 1.933620e-03 1.544871e-03
## GO:0010498 108/2840 496/18800 3.904095e-05 1.933620e-03 1.544871e-03
## GO:2001234 58/2840 230/18800 4.028706e-05 1.979502e-03 1.581528e-03
## GO:0061037 14/2840 30/18800 4.112524e-05 2.004775e-03 1.601720e-03
## GO:0071548 17/2840 41/18800 4.202493e-05 2.007788e-03 1.604128e-03
## GO:0006757 27/2840 82/18800 4.206490e-05 2.007788e-03 1.604128e-03
## GO:0043434 91/2840 404/18800 4.215999e-05 2.007788e-03 1.604128e-03
## GO:0030595 59/2840 236/18800 4.542018e-05 2.146537e-03 1.714981e-03
## GO:0035150 40/2840 142/18800 4.597310e-05 2.156208e-03 1.722708e-03
## GO:0090066 106/2840 487/18800 4.660411e-05 2.158058e-03 1.724186e-03
## GO:0048545 77/2840 330/18800 4.670970e-05 2.158058e-03 1.724186e-03
## GO:0046390 50/2840 191/18800 4.773725e-05 2.180189e-03 1.741868e-03
## GO:0003015 63/2840 257/18800 4.824517e-05 2.180189e-03 1.741868e-03
## GO:1901293 63/2840 257/18800 4.824517e-05 2.180189e-03 1.741868e-03
## GO:0060047 61/2840 247/18800 5.006999e-05 2.246256e-03 1.794652e-03
## GO:0072503 107/2840 494/18800 5.301173e-05 2.361119e-03 1.886423e-03
## GO:0002062 33/2840 110/18800 5.355617e-05 2.368330e-03 1.892184e-03
## GO:0006457 54/2840 212/18800 5.463394e-05 2.398856e-03 1.916573e-03
## GO:0046916 34/2840 115/18800 5.772259e-05 2.516624e-03 2.010663e-03
## GO:0030593 32/2840 106/18800 6.033786e-05 2.612250e-03 2.087064e-03
## GO:0016055 99/2840 452/18800 6.356099e-05 2.732681e-03 2.183283e-03
## GO:0097530 42/2840 154/18800 6.842421e-05 2.921478e-03 2.334123e-03
## GO:2000116 57/2840 229/18800 6.895322e-05 2.923900e-03 2.336057e-03
## GO:0007517 77/2840 334/18800 7.146546e-05 3.009814e-03 2.404699e-03
## GO:0010950 46/2840 174/18800 7.269126e-05 3.040754e-03 2.429419e-03
## GO:0046513 23/2840 67/18800 7.369079e-05 3.061877e-03 2.446295e-03
## GO:0006023 26/2840 80/18800 7.427995e-05 3.065781e-03 2.449414e-03
## GO:0198738 99/2840 454/18800 7.591649e-05 3.112576e-03 2.486801e-03
## GO:0010038 80/2840 351/18800 7.868282e-05 3.204772e-03 2.560461e-03
## GO:0009185 33/2840 112/18800 7.931545e-05 3.209425e-03 2.564178e-03
## GO:0071216 62/2840 256/18800 8.029382e-05 3.227916e-03 2.578952e-03
## GO:0006024 25/2840 76/18800 8.127182e-05 3.246154e-03 2.593523e-03
## GO:0071470 16/2840 39/18800 8.208572e-05 3.257646e-03 2.602704e-03
## GO:0050900 86/2840 384/18800 8.357473e-05 3.282733e-03 2.622748e-03
## GO:0009152 45/2840 170/18800 8.377835e-05 3.282733e-03 2.622748e-03
## GO:0001655 80/2840 352/18800 8.701870e-05 3.367080e-03 2.690137e-03
## GO:1904062 80/2840 352/18800 8.701870e-05 3.367080e-03 2.690137e-03
## GO:0009612 51/2840 201/18800 9.639366e-05 3.706446e-03 2.961275e-03
## GO:0030099 87/2840 391/18800 9.698664e-05 3.706446e-03 2.961275e-03
## GO:0032526 32/2840 109/18800 1.089684e-04 4.138793e-03 3.306699e-03
## GO:0098657 58/2840 238/18800 1.119013e-04 4.166365e-03 3.328728e-03
## GO:0006164 49/2840 192/18800 1.121294e-04 4.166365e-03 3.328728e-03
## GO:0010952 49/2840 192/18800 1.121294e-04 4.166365e-03 3.328728e-03
## GO:0060485 70/2840 301/18800 1.123862e-04 4.166365e-03 3.328728e-03
## GO:0001836 20/2840 56/18800 1.145647e-04 4.221845e-03 3.373055e-03
## GO:0050878 85/2840 382/18800 1.158087e-04 4.224692e-03 3.375329e-03
## GO:0048705 56/2840 228/18800 1.165497e-04 4.224692e-03 3.375329e-03
## GO:0072001 72/2840 312/18800 1.166891e-04 4.224692e-03 3.375329e-03
## GO:0032527 18/2840 48/18800 1.212040e-04 4.362639e-03 3.485542e-03
## GO:0034764 53/2840 213/18800 1.227061e-04 4.388075e-03 3.505864e-03
## GO:0048762 59/2840 244/18800 1.234657e-04 4.388075e-03 3.505864e-03
## GO:0006066 81/2840 361/18800 1.240370e-04 4.388075e-03 3.505864e-03
## GO:0007033 48/2840 188/18800 1.294996e-04 4.555296e-03 3.639466e-03
## GO:0010232 27/2840 87/18800 1.320333e-04 4.592236e-03 3.668979e-03
## GO:0150104 27/2840 87/18800 1.320333e-04 4.592236e-03 3.668979e-03
## GO:0090257 60/2840 250/18800 1.356007e-04 4.689965e-03 3.747060e-03
## GO:1904851 7/2840 10/18800 1.402011e-04 4.800496e-03 3.835369e-03
## GO:0006986 38/2840 139/18800 1.403472e-04 4.800496e-03 3.835369e-03
## GO:0046661 43/2840 164/18800 1.501289e-04 5.106858e-03 4.080138e-03
## GO:0042776 10/2840 19/18800 1.510479e-04 5.110042e-03 4.082682e-03
## GO:0006487 23/2840 70/18800 1.573891e-04 5.267005e-03 4.208088e-03
## GO:0071260 23/2840 70/18800 1.573891e-04 5.267005e-03 4.208088e-03
## GO:0010876 96/2840 446/18800 1.592621e-04 5.301031e-03 4.235272e-03
## GO:0006970 25/2840 79/18800 1.637034e-04 5.419719e-03 4.330099e-03
## GO:0044106 33/2840 116/18800 1.666273e-04 5.473807e-03 4.373313e-03
## GO:0006972 12/2840 26/18800 1.671054e-04 5.473807e-03 4.373313e-03
## GO:0034349 9/2840 16/18800 1.680782e-04 5.476696e-03 4.375621e-03
## GO:0071474 8/2840 13/18800 1.691290e-04 5.482080e-03 4.379923e-03
## GO:0009267 42/2840 160/18800 1.732163e-04 5.544795e-03 4.430028e-03
## GO:0019221 103/2840 486/18800 1.735378e-04 5.544795e-03 4.430028e-03
## GO:0009308 34/2840 121/18800 1.737506e-04 5.544795e-03 4.430028e-03
## GO:0009615 86/2840 392/18800 1.758920e-04 5.584346e-03 4.461628e-03
## GO:0034599 66/2840 284/18800 1.773550e-04 5.602065e-03 4.475785e-03
## GO:0008016 52/2840 211/18800 1.830079e-04 5.751279e-03 4.594999e-03
## GO:0008654 61/2840 258/18800 1.862328e-04 5.823066e-03 4.652354e-03
## GO:0042326 84/2840 382/18800 1.918775e-04 5.958121e-03 4.760256e-03
## GO:0060349 29/2840 98/18800 1.926660e-04 5.958121e-03 4.760256e-03
## GO:0070555 38/2840 141/18800 1.934392e-04 5.958121e-03 4.760256e-03
## GO:0106106 39/2840 146/18800 1.963065e-04 5.977520e-03 4.775756e-03
## GO:0120161 39/2840 146/18800 1.963065e-04 5.977520e-03 4.775756e-03
## GO:0006734 13/2840 30/18800 1.969656e-04 5.977520e-03 4.775756e-03
## GO:0051099 44/2840 171/18800 2.004659e-04 6.054071e-03 4.836916e-03
## GO:0032331 11/2840 23/18800 2.117748e-04 6.333804e-03 5.060410e-03
## GO:0034312 11/2840 23/18800 2.117748e-04 6.333804e-03 5.060410e-03
## GO:0043122 60/2840 254/18800 2.147384e-04 6.374225e-03 5.092704e-03
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## GO:1905954 28/2840 94/18800 2.181387e-04 6.430937e-03 5.138014e-03
## GO:0071300 22/2840 67/18800 2.192486e-04 6.433025e-03 5.139683e-03
## GO:0034612 59/2840 249/18800 2.211778e-04 6.434784e-03 5.141088e-03
## GO:0043457 18/2840 50/18800 2.213873e-04 6.434784e-03 5.141088e-03
## GO:1901214 71/2840 313/18800 2.239534e-04 6.478952e-03 5.176376e-03
## GO:0010001 53/2840 218/18800 2.298040e-04 6.617287e-03 5.286899e-03
## GO:0006165 29/2840 99/18800 2.336753e-04 6.697609e-03 5.351072e-03
## GO:0031669 52/2840 213/18800 2.348430e-04 6.700060e-03 5.353030e-03
## GO:0032368 33/2840 118/18800 2.366508e-04 6.720666e-03 5.369493e-03
## GO:0006767 21/2840 63/18800 2.390085e-04 6.756629e-03 5.398227e-03
## GO:1990266 35/2840 128/18800 2.510358e-04 7.064375e-03 5.644101e-03
## GO:0048872 65/2840 282/18800 2.524235e-04 7.071284e-03 5.649621e-03
## GO:0051403 58/2840 245/18800 2.551001e-04 7.114077e-03 5.683810e-03
## GO:1902600 36/2840 133/18800 2.564301e-04 7.119098e-03 5.687822e-03
## GO:0018126 12/2840 27/18800 2.596099e-04 7.175201e-03 5.732645e-03
## GO:2001014 10/2840 20/18800 2.612528e-04 7.188515e-03 5.743283e-03
## GO:0062012 76/2840 342/18800 2.698733e-04 7.392856e-03 5.906542e-03
## GO:0060326 71/2840 315/18800 2.730653e-04 7.447346e-03 5.950077e-03
## GO:0046939 29/2840 100/18800 2.822620e-04 7.632766e-03 6.098218e-03
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## GO:0050920 54/2840 225/18800 2.850325e-04 7.672330e-03 6.129828e-03
## GO:0006099 13/2840 31/18800 2.925653e-04 7.807207e-03 6.237589e-03
## GO:0034311 13/2840 31/18800 2.925653e-04 7.807207e-03 6.237589e-03
## GO:0006576 30/2840 105/18800 2.973884e-04 7.868084e-03 6.286226e-03
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## GO:1902903 82/2840 376/18800 2.999539e-04 7.894358e-03 6.307218e-03
## GO:0043270 63/2840 273/18800 3.009318e-04 7.894358e-03 6.307218e-03
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## GO:0120163 17/2840 47/18800 3.080028e-04 7.945474e-03 6.348057e-03
## GO:1990845 41/2840 159/18800 3.090809e-04 7.945474e-03 6.348057e-03
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## GO:0051770 9/2840 17/18800 3.092972e-04 7.945474e-03 6.348057e-03
## GO:0090075 14/2840 35/18800 3.115839e-04 7.971141e-03 6.368564e-03
## GO:0051346 81/2840 371/18800 3.135588e-04 7.988652e-03 6.382554e-03
## GO:0016266 16/2840 43/18800 3.168700e-04 8.039927e-03 6.423521e-03
## GO:0042401 15/2840 39/18800 3.188517e-04 8.057188e-03 6.437311e-03
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## GO:0044089 103/2840 494/18800 3.246977e-04 8.138475e-03 6.502256e-03
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## GO:0006596 8/2840 14/18800 3.422940e-04 8.343080e-03 6.665726e-03
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## GO:0045017 59/2840 253/18800 3.449396e-04 8.366691e-03 6.684590e-03
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## GO:0000422 26/2840 88/18800 4.148108e-04 9.654488e-03 7.713479e-03
## GO:0061726 26/2840 88/18800 4.148108e-04 9.654488e-03 7.713479e-03
## GO:0070588 70/2840 314/18800 4.186492e-04 9.707330e-03 7.755697e-03
## GO:0044262 65/2840 287/18800 4.212004e-04 9.730043e-03 7.773843e-03
## GO:0071731 10/2840 21/18800 4.314306e-04 9.929320e-03 7.933056e-03
## GO:0009309 15/2840 40/18800 4.395202e-04 1.004871e-02 8.028443e-03
## GO:0061035 22/2840 70/18800 4.398643e-04 1.004871e-02 8.028443e-03
## GO:0006839 45/2840 182/18800 4.439909e-04 1.010569e-02 8.073968e-03
## GO:0010638 101/2840 487/18800 4.489543e-04 1.016645e-02 8.122509e-03
## GO:0001659 44/2840 177/18800 4.513772e-04 1.016645e-02 8.122509e-03
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## GO:0045926 57/2840 245/18800 4.579583e-04 1.027254e-02 8.207269e-03
## GO:0002064 49/2840 203/18800 4.617786e-04 1.029685e-02 8.226699e-03
## GO:0006754 19/2840 57/18800 4.656952e-04 1.029685e-02 8.226699e-03
## GO:0038066 19/2840 57/18800 4.656952e-04 1.029685e-02 8.226699e-03
## GO:0060350 19/2840 57/18800 4.656952e-04 1.029685e-02 8.226699e-03
## GO:0035107 37/2840 142/18800 4.770525e-04 1.047316e-02 8.367562e-03
## GO:0035108 37/2840 142/18800 4.770525e-04 1.047316e-02 8.367562e-03
## GO:0010822 23/2840 75/18800 4.881530e-04 1.067899e-02 8.532010e-03
## GO:0022411 96/2840 460/18800 4.922712e-04 1.073117e-02 8.573693e-03
## GO:0032970 84/2840 393/18800 4.994210e-04 1.084883e-02 8.667698e-03
## GO:0006493 26/2840 89/18800 5.029692e-04 1.084976e-02 8.668448e-03
## GO:0009199 26/2840 89/18800 5.029692e-04 1.084976e-02 8.668448e-03
## GO:0043281 49/2840 204/18800 5.202081e-04 1.118267e-02 8.934421e-03
## GO:0006595 9/2840 18/18800 5.358398e-04 1.141598e-02 9.120828e-03
## GO:0042339 9/2840 18/18800 5.358398e-04 1.141598e-02 9.120828e-03
## GO:0034767 41/2840 163/18800 5.365935e-04 1.141598e-02 9.120828e-03
## GO:0046467 38/2840 148/18800 5.499117e-04 1.165926e-02 9.315195e-03
## GO:0006874 95/2840 456/18800 5.577857e-04 1.178584e-02 9.416328e-03
## GO:0032412 60/2840 263/18800 5.641012e-04 1.187874e-02 9.490552e-03
## GO:0055072 25/2840 85/18800 5.720268e-04 1.198358e-02 9.574309e-03
## GO:0048538 16/2840 45/18800 5.729508e-04 1.198358e-02 9.574309e-03
## GO:0021602 12/2840 29/18800 5.776743e-04 1.204169e-02 9.620738e-03
## GO:0032869 49/2840 205/18800 5.851480e-04 1.211468e-02 9.679057e-03
## GO:0071559 59/2840 258/18800 5.855662e-04 1.211468e-02 9.679057e-03
## GO:0055074 97/2840 468/18800 5.883659e-04 1.211468e-02 9.679057e-03
## GO:0042176 84/2840 395/18800 5.890033e-04 1.211468e-02 9.679057e-03
## GO:0030178 43/2840 174/18800 5.937644e-04 1.217217e-02 9.724987e-03
## GO:0043254 85/2840 401/18800 6.094368e-04 1.237443e-02 9.886585e-03
## GO:0008207 14/2840 37/18800 6.096271e-04 1.237443e-02 9.886585e-03
## GO:0045454 14/2840 37/18800 6.096271e-04 1.237443e-02 9.886585e-03
## GO:0098798 108/2979 281/19594 1.039090e-21 7.616530e-19 6.201727e-19
## GO:0005743 154/2979 491/19594 5.734252e-20 2.101603e-17 1.711222e-17
## GO:0098800 68/2979 155/19594 1.106679e-17 2.703985e-15 2.201708e-15
## GO:0000502 37/2979 59/19594 1.230118e-16 2.254191e-14 1.835465e-14
## GO:1905369 41/2979 79/19594 2.830803e-14 4.149958e-12 3.379085e-12
## GO:0070469 46/2979 101/19594 3.817257e-13 4.663415e-11 3.797166e-11
## GO:0005746 43/2979 94/19594 1.843601e-12 1.930513e-10 1.571912e-10
## GO:0098803 42/2979 91/19594 2.303293e-12 2.110392e-10 1.718378e-10
## GO:1905368 47/2979 111/19594 5.467479e-12 4.452958e-10 3.625802e-10
## GO:0005839 17/2979 20/19594 8.557908e-12 6.272946e-10 5.107720e-10
## GO:0005788 92/2979 311/19594 6.782873e-11 4.519860e-09 3.680277e-09
## GO:1990204 46/2979 120/19594 5.140589e-10 3.140043e-08 2.556766e-08
## GO:0005747 26/2979 49/19594 7.791469e-10 3.807431e-08 3.100184e-08
## GO:0030964 26/2979 49/19594 7.791469e-10 3.807431e-08 3.100184e-08
## GO:0045271 26/2979 49/19594 7.791469e-10 3.807431e-08 3.100184e-08
## GO:0019867 72/2979 234/19594 1.196039e-09 5.241518e-08 4.267883e-08
## GO:0062023 113/2979 429/19594 1.215632e-09 5.241518e-08 4.267883e-08
## GO:0016469 26/2979 50/19594 1.388516e-09 5.654347e-08 4.604028e-08
## GO:0031300 109/2979 412/19594 1.825553e-09 7.042791e-08 5.734563e-08
## GO:0031968 71/2979 232/19594 2.014341e-09 7.382561e-08 6.011218e-08
## GO:0005741 64/2979 205/19594 5.193588e-09 1.812810e-07 1.476072e-07
## GO:0005759 117/2979 473/19594 3.053727e-08 9.853277e-07 8.022989e-07
## GO:0031301 99/2979 382/19594 3.091751e-08 9.853277e-07 8.022989e-07
## GO:0019774 10/2979 11/19594 6.178659e-08 1.887066e-06 1.536535e-06
## GO:0005604 35/2979 95/19594 1.843881e-07 5.406259e-06 4.402023e-06
## GO:0140534 42/2979 125/19594 2.309768e-07 6.511769e-06 5.302180e-06
## GO:0031228 27/2979 67/19594 5.794959e-07 1.573224e-05 1.280991e-05
## GO:0022624 14/2979 23/19594 7.154572e-07 1.872965e-05 1.525054e-05
## GO:0005753 13/2979 21/19594 1.377805e-06 3.482521e-05 2.835628e-05
## GO:0030173 25/2979 62/19594 1.485583e-06 3.629775e-05 2.955529e-05
## GO:0045259 13/2979 22/19594 2.897474e-06 6.851123e-05 5.578498e-05
## GO:0042383 40/2979 131/19594 6.690907e-06 1.532636e-04 1.247942e-04
## GO:0005838 11/2979 19/19594 2.267545e-05 5.036698e-04 4.101110e-04
## GO:0015629 110/2979 499/19594 2.557244e-05 5.513117e-04 4.489032e-04
## GO:1990351 91/2979 399/19594 3.313791e-05 6.767623e-04 5.510508e-04
## GO:0033177 13/2979 26/19594 3.323798e-05 6.767623e-04 5.510508e-04
## GO:0042470 33/2979 109/19594 4.996153e-05 9.637316e-04 7.847143e-04
## GO:0048770 33/2979 109/19594 4.996153e-05 9.637316e-04 7.847143e-04
## GO:0033176 13/2979 27/19594 5.519069e-05 1.037302e-03 8.446187e-04
## GO:0005774 99/2979 449/19594 6.291472e-05 1.152912e-03 9.387539e-04
## GO:0005581 27/2979 86/19594 1.187551e-04 2.123110e-03 1.728733e-03
## GO:0034774 74/2979 322/19594 1.340810e-04 2.340032e-03 1.905361e-03
## GO:0005758 26/2979 83/19594 1.640218e-04 2.796000e-03 2.276631e-03
## GO:0060205 74/2979 325/19594 1.816523e-04 3.026162e-03 2.464039e-03
## GO:0031970 28/2979 93/19594 1.997515e-04 3.197202e-03 2.603308e-03
## GO:0045121 74/2979 326/19594 2.006430e-04 3.197202e-03 2.603308e-03
## GO:0031983 74/2979 327/19594 2.214239e-04 3.381327e-03 2.753231e-03
## GO:0098857 74/2979 327/19594 2.214239e-04 3.381327e-03 2.753231e-03
## GO:0001726 45/2979 177/19594 2.659333e-04 3.965333e-03 3.228755e-03
## GO:0098573 27/2979 90/19594 2.746477e-04 3.965333e-03 3.228755e-03
## GO:0033178 10/2979 20/19594 2.758963e-04 3.965333e-03 3.228755e-03
## GO:1904813 34/2979 124/19594 3.266677e-04 4.604758e-03 3.749405e-03
## GO:0005832 7/2979 11/19594 3.491881e-04 4.829338e-03 3.932267e-03
## GO:0045277 12/2979 28/19594 4.169617e-04 5.659869e-03 4.608524e-03
## GO:0005751 11/2979 25/19594 5.517829e-04 7.222444e-03 5.880844e-03
## GO:0016471 11/2979 25/19594 5.517829e-04 7.222444e-03 5.880844e-03
## GO:1902495 81/2979 377/19594 6.459555e-04 8.306760e-03 6.763744e-03
## GO:0098644 10/2979 22/19594 7.212728e-04 9.115396e-03 7.422172e-03
## GO:0005766 39/2979 155/19594 8.160566e-04 9.763975e-03 7.950275e-03
## GO:0042582 39/2979 155/19594 8.160566e-04 9.763975e-03 7.950275e-03
## GO:0000314 11/2979 26/19594 8.258751e-04 9.763975e-03 7.950275e-03
## GO:0005763 11/2979 26/19594 8.258751e-04 9.763975e-03 7.950275e-03
## GO:0070069 15/2979 42/19594 8.578520e-04 9.981040e-03 8.127019e-03
## GO:0005938 68/2979 310/19594 9.508911e-04 1.089067e-02 8.867685e-03
## GO:0031227 42/2979 172/19594 1.008340e-03 1.137097e-02 9.258762e-03
## GO:0032592 25/2979 88/19594 1.100590e-03 1.222322e-02 9.952705e-03
## GO:0015399 61/2917 162/18410 1.209625e-11 1.392279e-08 1.240184e-08
## GO:0009055 49/2917 125/18410 2.427010e-10 1.396744e-07 1.244162e-07
## GO:0015453 33/2917 72/18410 1.890931e-09 7.254872e-07 6.462339e-07
## GO:0016655 28/2917 57/18410 4.563929e-09 1.192731e-06 1.062436e-06
## GO:0005201 58/2917 172/18410 5.181283e-09 1.192731e-06 1.062436e-06
## GO:0003954 24/2917 45/18410 7.078297e-09 1.219371e-06 1.086165e-06
## GO:0008137 23/2917 42/18410 7.415811e-09 1.219371e-06 1.086165e-06
## GO:0050136 23/2917 43/18410 1.355269e-08 1.949893e-06 1.736884e-06
## GO:0003955 23/2917 45/18410 4.197461e-08 5.368087e-06 4.781669e-06
## GO:0022804 103/2917 404/18410 3.152201e-07 3.628183e-05 3.231835e-05
## GO:0004298 11/2917 14/18410 3.543179e-07 3.707454e-05 3.302447e-05
## GO:0016651 33/2917 88/18410 6.670602e-07 6.398219e-05 5.699269e-05
## GO:0015036 20/2917 42/18410 1.375347e-06 1.217711e-04 1.084687e-04
## GO:0016667 24/2917 57/18410 2.009876e-06 1.652405e-04 1.471894e-04
## GO:0015078 39/2917 120/18410 4.441813e-06 3.408351e-04 3.036018e-04
## GO:0008201 49/2917 168/18410 9.067883e-06 6.523209e-04 5.810604e-04
## GO:0019829 19/2917 44/18410 1.495375e-05 9.902063e-04 8.820348e-04
## GO:0015035 17/2917 37/18410 1.548542e-05 9.902063e-04 8.820348e-04
## GO:0070003 13/2917 24/18410 1.707639e-05 1.034470e-03 9.214629e-04
## GO:0030020 18/2917 41/18410 1.898403e-05 1.092531e-03 9.731815e-04
## GO:0016853 44/2917 155/18410 5.212730e-05 2.857072e-03 2.544962e-03
## GO:0046933 10/2917 17/18410 6.498973e-05 3.400144e-03 3.028708e-03
## GO:0005539 60/2917 234/18410 7.250557e-05 3.628431e-03 3.232056e-03
## GO:0016829 51/2917 195/18410 1.434196e-04 6.878164e-03 6.126784e-03
## GO:0016758 51/2917 198/18410 2.152362e-04 9.695705e-03 8.636532e-03
## GO:0042626 28/2917 90/18410 2.190168e-04 9.695705e-03 8.636532e-03
## geneID
## GO:0006091 ACO1/ACO2/ADPGK/AIFM2/AK4/AKR1B1/ALDH1L2/ALDH2/ALDOA/AOC2/ARL2/ASPH/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5IF1/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/CISD1/COA6/COQ10B/COX17/COX4I1/COX5A/COX5B/COX6C/COX7A2/COX7C/CYB5A/CYCS/DDIT4/DLAT/DMGDH/DNAJC15/DYRK2/ENO1/ENO2/ENO4/GAPDH/GFPT2/GLRX2/GPD2/GPI/GSR/GYS1/HDAC4/HIF1A/HK2/IDH3A/IFNAR1/IFNLR1/IL10RB/IRS1/KHK/LDHA/MAOB/MDH1/MDH1B/MDH2/MRAP2/MTOR/MYBBP1A/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOS2/NR1D1/NR4A3/OGT/P2RX7/PARK7/PDHB/PDIA5/PER2/PFKL/PFKP/PGAM1/PGAM2/PGK1/PHGDH/PHKA1/PHKA2/PHKG1/PHKG2/PID1/PKM/PLEC/POLG2/PPIF/PPP1R3B/PPP1R3C/PRDM16/PRKAA2/PRKAG2/PSEN1/QDPR/RHOA/RUBCNL/SCO2/SDHA/SDHAF2/SDHC/SELENOS/SIRT3/SLC25A23/SLC25A25/SLC2A6/SOD2/SRD5A1/STEAP4/SUCLA2/SUCLG2/TALDO1/TIGAR/TPI1/UGP2/UQCC2/UQCR11/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0045333 ACO1/ACO2/AIFM2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/CISD1/COA6/COQ10B/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DLAT/DNAJC15/GPD2/HIF1A/IDH3A/IFNAR1/IFNLR1/IL10RB/MDH1/MDH1B/MDH2/MYBBP1A/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOS2/NR4A3/PARK7/PDHB/PLEC/POLG2/PPIF/PRDM16/RHOA/SCO2/SDHA/SDHAF2/SDHC/SIRT3/SLC25A23/SLC25A25/SOD2/SUCLA2/SUCLG2/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0015980 ACO1/ACO2/AIFM2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/CISD1/COA6/COQ10B/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DLAT/DNAJC15/DYRK2/GFPT2/GPD2/GYS1/HIF1A/IDH3A/IFNAR1/IFNLR1/IL10RB/IRS1/KHK/MDH1/MDH1B/MDH2/MRAP2/MTOR/MYBBP1A/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOS2/NR1D1/NR4A3/PARK7/PDHB/PER2/PHKA1/PHKA2/PHKG1/PHKG2/PID1/PLEC/POLG2/PPIF/PPP1R3B/PPP1R3C/PRDM16/PRKAG2/RHOA/RUBCNL/SCO2/SDHA/SDHAF2/SDHC/SELENOS/SIRT3/SLC25A23/SLC25A25/SOD2/SUCLA2/SUCLG2/TIGAR/UGP2/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0046034 ADPGK/AK2/AK4/ALDOA/ARL2/ATP1A2/ATP1B1/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5IF1/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DDIT4/DNAJC15/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/OGT/OLA1/P2RX7/PARK7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PPIF/PRKAA2/PRKAG2/PSEN1/RHOA/SDHA/SDHAF2/SDHC/SLC25A23/SLC25A25/SLC2A6/TIGAR/TPI1/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0009060 ACO1/ACO2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DLAT/DNAJC15/HIF1A/IDH3A/MDH1/MDH1B/MDH2/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/PDHB/PPIF/RHOA/SDHA/SDHAF2/SDHC/SIRT3/SLC25A23/SUCLA2/SUCLG2/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0006119 AK4/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DNAJC15/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/PPIF/RHOA/SDHA/SDHAF2/SDHC/SLC25A23/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0030198 ABL1/ADAMTS1/ADAMTS15/ADAMTS2/ADAMTS6/ADAMTSL2/ADAMTSL3/AEBP1/AGT/ANGPTL7/ANTXR1/B4GALT1/BCL3/BMP1/BMP2/CCDC80/CFLAR/CHADL/CLASP2/COL11A2/COL12A1/COL15A1/COL18A1/COL22A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL8A2/COL9A1/COL9A2/COL9A3/COLGALT2/CSGALNACT1/CTSK/CTSS/DDR1/DPT/ELANE/ELF3/ERCC2/ERO1A/FERMT1/FKBP10/FLOT1/FOXC2/FOXF1/FURIN/GAS6/HAS3/IER3IP1/IL6/ITGB1/LAMB1/LAMB3/LAMC1/LOX/LOXL3/LOXL4/LUM/MARCOL/MIA/MMP1/MMP10/MMP12/MMP24/MMP25/MMP3/MPV17/NFKB2/NID2/NTNG2/P3H4/P4HA1/PTX3/PXDN/QSOX1/SFRP2/SH3PXD2B/SLC39A8/SMOC1/SMOC2/SOX9/SPINT1/SULF2/TGFB2/TGFBI/TGFBR1/TNFRSF11B/TNFRSF1B/TNXB/ZNF469
## GO:0043062 ABL1/ADAMTS1/ADAMTS15/ADAMTS2/ADAMTS6/ADAMTSL2/ADAMTSL3/AEBP1/AGT/ANGPTL7/ANTXR1/B4GALT1/BCL3/BMP1/BMP2/CCDC80/CFLAR/CHADL/CLASP2/COL11A2/COL12A1/COL15A1/COL18A1/COL22A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL8A2/COL9A1/COL9A2/COL9A3/COLGALT2/CSGALNACT1/CTSK/CTSS/DDR1/DPT/ELANE/ELF3/ERCC2/ERO1A/FERMT1/FKBP10/FLOT1/FOXC2/FOXF1/FURIN/GAS6/HAS3/IER3IP1/IL6/ITGB1/LAMB1/LAMB3/LAMC1/LOX/LOXL3/LOXL4/LUM/MARCOL/MIA/MMP1/MMP10/MMP12/MMP24/MMP25/MMP3/MPV17/NFKB2/NID2/NTNG2/P3H4/P4HA1/PTX3/PXDN/QSOX1/SFRP2/SH3PXD2B/SLC39A8/SMOC1/SMOC2/SOX9/SPINT1/SULF2/TGFB2/TGFBI/TGFBR1/TNFRSF11B/TNFRSF1B/TNXB/ZNF469
## GO:0045229 ABL1/ADAMTS1/ADAMTS15/ADAMTS2/ADAMTS6/ADAMTSL2/ADAMTSL3/AEBP1/AGT/ANGPTL7/ANTXR1/B4GALT1/BCL3/BMP1/BMP2/CCDC80/CFLAR/CHADL/CLASP2/COL11A2/COL12A1/COL15A1/COL18A1/COL22A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL8A2/COL9A1/COL9A2/COL9A3/COLGALT2/CSGALNACT1/CTSK/CTSS/DDR1/DPT/ELANE/ELF3/ERCC2/ERO1A/FERMT1/FKBP10/FLOT1/FOXC2/FOXF1/FURIN/GAS6/HAS3/IER3IP1/IL6/ITGB1/LAMB1/LAMB3/LAMC1/LOX/LOXL3/LOXL4/LUM/MARCOL/MIA/MMP1/MMP10/MMP12/MMP24/MMP25/MMP3/MPV17/NFKB2/NID2/NTNG2/P3H4/P4HA1/PTX3/PXDN/QSOX1/SFRP2/SH3PXD2B/SLC39A8/SMOC1/SMOC2/SOX9/SPINT1/SULF2/TGFB2/TGFBI/TGFBR1/TNFRSF11B/TNFRSF1B/TNXB/ZNF469
## GO:0022900 AIFM2/AKR1B1/ALDH2/AOC2/ASPH/BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7C/CYB5A/CYCS/DMGDH/DNAJC15/GLRX2/GPD2/GSR/MAOB/MYBBP1A/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/PDIA5/PHGDH/PLEC/POLG2/QDPR/SCO2/SDHA/SDHAF2/SDHC/SOD2/SRD5A1/STEAP4/UQCRFS1/UQCRQ
## GO:0022904 AIFM2/BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7C/CYCS/DNAJC15/GPD2/MYBBP1A/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/PLEC/POLG2/SCO2/SDHA/SDHAF2/SDHC/SOD2/UQCRFS1/UQCRQ
## GO:0042773 BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7C/CYCS/DNAJC15/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/SDHA/SDHAF2/SDHC/UQCRFS1/UQCRQ
## GO:0042775 BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7C/CYCS/DNAJC15/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/SDHA/SDHAF2/SDHC/UQCRFS1/UQCRQ
## GO:0033108 AIFM1/COA3/COA4/COX14/COX16/COX17/DMAC2/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFAF2/NDUFAF4/NDUFAF8/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS8/PET100/SAMM50/SCO2/SDHAF2/TIMM21/UQCC2/UQCRFS1
## GO:0019646 COX4I1/COX5A/COX5B/COX7C/CYCS/DNAJC15/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/SDHA/SDHAF2/SDHC/UQCRFS1/UQCRQ
## GO:0006120 DNAJC15/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7
## GO:0003018 ABCA2/ABCC5/ABL1/ADM/ADORA2A/ADORA2B/AGT/AKAP12/ANGPT1/ATP1A2/ATP2A3/ATP2B4/ATP8A1/BMP6/C2CD4A/C2CD4B/CD38/DBH/DDAH1/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/EXT2/F2R/FOXC2/GCH1/GPER1/GRIP2/GUCY1A1/HRH1/ITGA1/KCNMA1/KCNMB2/KCNMB4/KLF2/MFSD2A/MKKS/MTNR1B/NPR1/NPR3/OXTR/PER2/PLA2G6/PLEC/PTGS2/PTPRJ/RGS2/RHOA/ROCK1/ROCK2/SLC12A2/SLC16A2/SLC19A1/SLC1A4/SLC1A5/SLC24A3/SLC29A1/SLC29A2/SLC2A1/SLC2A13/SLC2A3/SLC38A1/SLC38A2/SLC44A1/SLC6A6/SLC7A2/SLC7A8/SLCO2B1/SLCO3A1/SOD2/TBXA2R/TFRC/TJP1/TJP2
## GO:0032496 ABCA1/ABL1/ADM/AKAP12/BDKRB1/BMP6/CCL2/CCL3/CCL5/CCR7/CD274/CD55/CEBPB/CHMP5/CLDN1/CSF2/CSF3/CTR9/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/EDN1/EDNRB/ELANE/EPHB2/F2R/FGF10/FGFR2/FOS/GCH1/GJB2/GSTP1/HCK/IFNAR1/IL10RA/IL6/IRAK2/LBP/LGALS9/MAOB/MAP2K3/MAPKAPK2/MEF2C/MIF/NFKB1/NFKBIA/NFKBIB/NOD2/NOS2/NR1D1/NR1H3/P2RX7/PCK1/PCK2/PDCD1LG2/PDCD4/PDE4B/PELI1/PF4/PF4V1/PRDX2/PRDX3/PTGER4/PTGFR/PTGS2/RARA/RHOA/RIPK2/SELE/SELENOS/SIRPA/SLPI/SOD2/SPON2/TAB2/TBXA2R/THBD/TIMP4/TNFAIP3/TNFRSF1B/TNIP1/TRIM5/VIM/WNT5A/ZC3H12A/ZFP36
## GO:0010257 DMAC2/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFAF2/NDUFAF4/NDUFAF8/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS8/TIMM21
## GO:0032981 DMAC2/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFAF2/NDUFAF4/NDUFAF8/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS8/TIMM21
## GO:0006790 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/AHCYL1/AMD1/ANGPT1/APIP/B3GNT2/B3GNT7/B4GALT4/B4GAT1/BGN/BHMT/BOLA2/BPNT2/CHPF2/CHST12/CHST2/CHST5/CHST7/CIAO2B/CLIC3/CSAD/CSGALNACT1/DIP2A/DLAT/DSE/DSEL/EDNRA/EDNRB/ELOVL2/ELOVL3/EXT2/FAR1/FITM2/GGT1/GGT5/GLCE/GLO1/GLRX2/GLRX3/GNS/GSR/GSS/GSTM2/GSTM4/GSTO1/GSTP1/GSTZ1/HAGH/HSCB/ISCA1/LYRM4/MAT2A/MCEE/MGST2/MICAL1/MMS19/MTHFD2L/NUDT19/PAPSS1/PAPSS2/PARK7/PDHB/PDHX/PDK1/PDK4/PHGDH/PMVK/PPT1/PPT2/PTGES2/SLC19A2/SLC19A3/SLC35B2/SOD2/SQOR/ST3GAL1/ST3GAL4/STAT5B/SUCLA2/SUCLG2/SULT1C4/SULT4A1/TPST1/UGDH/UST
## GO:0009259 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADPGK/AK2/AK3/AK4/ALDOA/AMPD3/ARL2/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/LDHA/MCCC2/MCEE/NME1/NPR1/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PSEN1/RAB23/RFK/RHOA/RORA/SLC2A6/SLC35B2/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/UCK2/UPP1/VCP
## GO:0009117 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADORA2B/ADPGK/AK2/AK3/AK4/ALDOA/AMPD3/ARL2/ASPDH/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/FLAD1/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/KARS1/KYNU/LACC1/LDHA/MCCC2/MCEE/MTHFD2L/NADK2/NAMPT/NAXD/NEIL1/NME1/NMNAT3/NNMT/NOS2/NPR1/NUDT17/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PARK7/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PRPSAP1/PSEN1/PTGIS/RAB23/RFK/RHOA/RORA/SARM1/SLC2A6/SLC35B2/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/TYMP/UCK2/UPP1/VCP
## GO:0009150 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADPGK/AK2/AK3/AK4/ALDOA/AMPD3/ARL2/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/LDHA/MCCC2/MCEE/NME1/NPR1/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PSEN1/RAB23/RHOA/RORA/SLC2A6/SLC35B2/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/VCP
## GO:0006753 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADORA2B/ADPGK/AK2/AK3/AK4/ALDOA/AMPD3/ARL2/ASPDH/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/FLAD1/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/KARS1/KYNU/LACC1/LDHA/MCCC2/MCEE/MTHFD2L/NADK2/NAMPT/NAXD/NEIL1/NME1/NMNAT3/NNMT/NOS2/NPR1/NUDT17/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PARK7/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PRPSAP1/PSEN1/PTGIS/RAB23/RFK/RHOA/RORA/SARM1/SLC2A6/SLC35B2/SMPDL3A/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/TYMP/UCK2/UPP1/VCP
## GO:0061448 ARRDC3/BGN/BMP1/BMP2/BMP6/BPNT2/CCN3/CCN4/CFLAR/CHADL/CHRDL2/CNMD/COL11A2/COL2A1/COL3A1/CREB3L2/CRIP1/CSF1/CSGALNACT1/CTSK/CYTL1/DDRGK1/DLX2/EDN1/EFEMP1/EGR1/EPYC/FGF18/FGF9/FGFR3/FOXC2/FOXD1/FRZB/GDF7/GLI3/HIF1A/HOXA3/HOXC4/HYAL2/LOX/MAF/MEF2C/MKKS/PKD1/PTH1R/PTPN11/RARA/RARB/RARG/RFLNA/ZNF664-RFLNA/RSPO2/SCIN/SELENOM/SERPINB7/SFRP2/SH3PXD2B/SLC25A25/SLC39A14/SNORC/SOX8/SOX9/SPTLC2/STC1/SULF2/TGFBI/TGFBR1/THBS3/TSKU/WNT2B/WNT5A/WNT9A/ZEB1
## GO:0006163 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADORA2B/ADPGK/AK2/AK3/AK4/ALDOA/AMPD3/ARL2/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/LACC1/LDHA/MCCC2/MCEE/MTHFD2L/NME1/NOS2/NPR1/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PRPSAP1/PSEN1/RAB23/RHOA/RORA/SLC2A6/SLC35B2/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/VCP
## GO:0019693 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADPGK/AK2/AK3/AK4/ALDOA/AMPD3/ARL2/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/LDHA/MCCC2/MCEE/NME1/NPR1/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PRPSAP1/PSEN1/RAB23/RFK/RHOA/RORA/SLC2A6/SLC35B2/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/UCK2/UPP1/VCP
## GO:0002237 ABCA1/ABL1/ADM/AKAP12/B2M/BDKRB1/BMP6/CCL2/CCL3/CCL5/CCR7/CD274/CD55/CEBPB/CHMP5/CLDN1/CSF2/CSF3/CTR9/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/EDN1/EDNRB/ELANE/EPHB2/F2R/FGF10/FGFR2/FOS/GCH1/GJB2/GSTP1/HCK/IFNAR1/IL10RA/IL6/IRAK2/LBP/LGALS9/MAOB/MAP2K3/MAPKAPK2/MEF2C/MIF/NFKB1/NFKBIA/NFKBIB/NOD2/NOS2/NR1D1/NR1H3/P2RX7/PCK1/PCK2/PDCD1LG2/PDCD4/PDE4B/PELI1/PF4/PF4V1/PRDX2/PRDX3/PTGER4/PTGFR/PTGS2/RARA/RHOA/RIPK2/SELE/SELENOS/SIRPA/SIRT2/SLPI/SOD2/SPON2/TAB2/TBXA2R/THBD/TIMP4/TNFAIP3/TNFRSF1B/TNIP1/TRIM5/VIM/WNT5A/ZC3H12A/ZFP36
## GO:1903829 ABHD17B/ACSL3/ACSL4/ADORA2A/ANG/ANK3/APBB3/ATP2B4/BMP6/C1QTNF3/C2CD2L/C2CD5/CARD10/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CD38/CDK5/CDK5RAP3/CHP1/CORO2B/CSNK2A2/DDRGK1/DOC2B/EDEM2/MMP24-AS1-EDEM2/EPB41/EPHB2/ERBB2/EXOC1/EXPH5/FYN/GAS6/GLI3/GLIS2/GNAI1/GPD1L/GPER1/HIF1A/HPS4/HYAL2/ICE1/IER3IP1/IPO5/ITGB1/JUP/KCNN4/LAMTOR5/LEPROT/LIF/MESD/MFF/MYO18A/MYO1C/NKX6-1/NLGN2/NR1H2/NUMA1/OAZ1/OAZ2/P2RX7/PARD6A/PARK7/PCK2/PCM1/PCNT/PDCD5/PDZK1/PGRMC1/PLA2G6/PLK3/PRKAA2/PRKCD/PRKCH/PRKCI/PRKCZ/PRKD1/PRR5L/PSEN1/PSMD9/PTGS2/RAB29/RANGRF/RAPGEF3/RBM22/ROCK2/SAR1B/SEC16B/CRYZL2P-SEC16B/SESN2/SOX4/TCF7L2/TCP1/TFRC/TGFB2/TGFB3/TMEM30A/TMEM30B/TNFAIP6/TOMM7/TRIM8/UBL5/WNT5A/YAP1/ZC3H12A/ZDHHC5/ZIC1
## GO:0009100 ABCA2/ALG2/ALG3/ALG5/ALG8/ALG9/B3GALT1/B3GALT2/B3GNT2/B3GNT7/B4GALT1/B4GALT4/B4GALT5/B4GAT1/BGN/BMP2/BPNT2/C1GALT1/C1GALT1C1/C1GALT1C1L/CCR7/CHP1/CHPF2/CHST10/CHST12/CHST7/CNMD/COL2A1/CSGALNACT1/CYTL1/DOLK/DPAGT1/DSE/DSEL/EDEM2/MMP24-AS1-EDEM2/EDEM3/ERP44/EXT2/FKTN/FOXL1/FUT11/GAL3ST2/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/GFPT2/GLCE/GNPTAB/HIF1A/HS6ST1/IL15/IL33/ITM2A/MAN1A1/MAN1C1/MAN2B1/MGAT1/MGAT4A/MGAT5/MLEC/MMP12/NCCRP1/NCSTN/NUS1/OGA/OGT/OSTC/PARK7/PCSK6/PHLDA1/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/PORCN/PSEN1/PTX3/RAMP1/RPN1/RPN2/SLC39A8/ST3GAL1/ST3GAL4/ST3GAL5/ST6GALNAC4/STT3B/SULF2/TCF7L2/TMEM165/TMTC3/TNIP1/UGDH/UST/XXYLT1
## GO:0051223 ACSL3/ACSL4/ADORA2A/ANG/ANGPT1/ANK3/APBB3/ATP5IF1/BAG4/BMP6/C1QTNF3/C2CD2L/C2CD5/CCL5/CCN3/CD38/CDK5/CHP1/CSNK2A2/DERL2/DNAJA1/DNAJC1/DOC2B/EDEM2/MMP24-AS1-EDEM2/EIPR1/ERBB2/ERLEC1/EXOC1/EXPH5/F2R/FERMT1/FYN/GAS6/GLI3/GPER1/HIF1A/HPS4/HYAL2/ICE1/IER3IP1/IFI27/IL6/IPO5/IRS1/JAGN1/JUP/KCNN4/LEPROT/LLGL2/MFF/MTNR1B/MYO18A/MYO1C/NDUFAF2/NKX6-1/NLGN2/NOLC1/NOS2/NR1D1/NR1H2/NR1H3/OAZ1/OAZ2/P2RX7/PARD6A/PARK7/PCK2/PCM1/PCNT/PDCD5/PDZK1/PER2/PFKL/PLA2G6/PLK3/PRKCD/PRKCZ/PRKD1/PRR5L/PSEN1/PSMD9/PTGS2/PTPN1/PTPN11/RAB11FIP5/RAB23/RAB29/RANGAP1/RAPGEF3/RBM22/RHBDD3/RHBDF1/SAA1/SAR1B/SEC16B/CRYZL2P-SEC16B/SELENOK/SFRP1/SH3TC2/SLC12A2/SOX4/SSTR5/STXBP5/SUFU/TAMALIN/TCF7L2/TCIRG1/TGFB2/TGFB3/TMEM30A/TMEM30B/TOMM7/TXN/UBL5/UHMK1/UQCC2/ZC3H12A/ZIC1
## GO:0062197 ABL1/AIFM1/AIFM2/AKR1B1/AKR1C3/AQP1/ARHGEF2/ATG7/ATM/ATP2A2/BECN1/BNIP3/BRF2/CAPN3/CHCHD2/CHUK/DDIT3/DNAJA1/EDN1/EDNRA/EFHD1/EIF2S1/ENDOG/EPAS1/FAS/FOS/FOXO1/FYN/GCH1/GJB2/GLRX2/GPR37L1/GSR/HIF1A/HSPB1/IL6/KLF2/LETM1/LRRC8C/LRRC8D/MAP3K5/MAPKAP1/MGST1/MMP3/MPV17/NCOA7/NOL3/NR4A2/NR4A3/P4HB/PARK7/PDK1/PLA2R1/PLEC/PLEKHA1/PNPLA8/PPIF/PRDX1/PRDX2/PRDX3/PRKAA2/PRKCD/PRKD1/PRODH/PRR5L/PTGS2/PTPRK/PYCR1/PYCR2/RELB/ROMO1/SELENOS/SESN2/SIRPA/SIRT2/SLC12A6/SLC25A23/SLC2A1/SOD2/STK39/TNFAIP3/TPM1/TXN/VNN1/XRCC5/ZC3H12A/ZFP36L1
## GO:0071453 AIFM1/AJUBA/AK4/AQP1/AQP3/ATG7/ATP6AP1/ATP6V0D1/ATP6V1G1/BNIP3/CCDC115/CFLAR/CHCHD2/CITED2/DDAH1/EDN1/EEF2K/EGLN1/EGLN3/EGR1/ENDOG/ENO1/EPAS1/ERO1A/FAM162A/FAS/FOXO1/HIF1A/HILPDA/HYOU1/LMNA/MTOR/NKX3-1/NOL3/P4HB/PCK1/PDK1/PGK1/PIK3CB/PLK3/PTGIS/PTGS2/ROCK2/RORA/SFRP1/SIRT2/SLC29A1/SLC8A3/STC1/STC2/TIGAR/ZFP36L1
## GO:0006090 ADPGK/ALDOA/ARL2/DDIT4/DLAT/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/LDHB/NR4A3/OGT/P2RX7/PC/PCK1/PCK2/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TPI1/VDAC1
## GO:0044272 ACLY/ACSBG2/ACSL3/ACSL4/AMD1/ANGPT1/APIP/B3GNT2/B3GNT7/B4GALT4/B4GAT1/BHMT/CHPF2/CHST12/CHST2/CHST5/CHST7/CSAD/CSGALNACT1/DIP2A/DLAT/DSE/DSEL/ELOVL2/ELOVL3/EXT2/GGT1/GGT5/GLCE/GSS/GSTP1/HAGH/MAT2A/MGST2/MTHFD2L/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PPT1/PPT2/SLC35B2/ST3GAL1/ST3GAL4/UGDH/UST
## GO:0051216 BGN/BMP1/BMP2/BMP6/BPNT2/CCN3/CCN4/CHADL/CHRDL2/CNMD/COL11A2/COL2A1/COL3A1/CREB3L2/CSGALNACT1/CTSK/CYTL1/DDRGK1/DLX2/EDN1/EFEMP1/EPYC/FGF18/FGF9/FGFR3/FRZB/GLI3/HIF1A/HOXA3/HOXC4/HYAL2/MAF/MEF2C/MKKS/PKD1/PTH1R/PTPN11/RARA/RARB/RARG/RFLNA/ZNF664-RFLNA/RSPO2/SCIN/SFRP2/SLC39A14/SNORC/SOX9/STC1/SULF2/TGFBI/TGFBR1/THBS3/TSKU/WNT2B/WNT5A/WNT9A/ZEB1
## GO:0034976 ABL1/AIFM1/ATP2A2/ATP2A3/ATXN3/AUP1/BAK1/BCL2L1/BOK/CDK5RAP3/CEBPB/CERT1/CREB3L2/CXCL8/DDIT3/DDRGK1/DERL1/DERL2/DNAJC3/EDEM2/MMP24-AS1-EDEM2/EDEM3/EIF2S1/ERLEC1/ERO1A/ERP44/FICD/FLOT1/GRINA/HM13/HYOU1/JKAMP/LPCAT3/MAN1A1/MANF/MAP3K5/MBTPS2/NCCRP1/NIBAN1/NR1H2/NR1H3/P4HB/PARK7/PDIA3/PDIA4/PLA2G6/PPP1R15A/PPP2CB/PTPN1/RNF121/SEC61B/SELENOK/SELENOS/SESN2/STC2/STT3B/THBS4/TMEM259/TMEM33/TMTC3/TNFRSF10B/TOR1A/TRAF2/TRIB3/UBE4B/UBQLN2/UFD1/USP14/USP25/VAPB/VCP
## GO:1903510 ABCC5/ANGPT1/B3GNT2/B3GNT7/B4GALT4/B4GAT1/BGN/BPNT2/CEMIP2/CHPF2/CHST12/CHST2/CHST5/CHST7/CSGALNACT1/DSE/DSEL/EDNRA/EDNRB/EXT2/GLCE/GNS/HAS3/HYAL2/IL15/ITIH3/ITIH5/NFKB1/ST3GAL1/ST3GAL4/TNFAIP6/UGDH/UST
## GO:1904951 ACSL3/ACSL4/ADORA2A/ANG/ANK3/APBB3/BMP6/C1QTNF3/C2CD2L/C2CD5/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CD38/CDK5/CHP1/CORO2B/CSNK2A2/DOC2B/EDEM2/MMP24-AS1-EDEM2/ERBB2/EXOC1/EXPH5/FYN/GAS6/GLI3/GPER1/HIF1A/HPS4/HYAL2/ICE1/IER3IP1/IPO5/JUP/KCNN4/LEPROT/MFF/MYO18A/MYO1C/NKX6-1/NLGN2/NR1H2/OAZ1/OAZ2/P2RX7/PARD6A/PCK2/PCM1/PCNT/PDCD5/PDZK1/PLA2G6/PLK3/PRKCD/PRKCZ/PRKD1/PRR5L/PSEN1/PSMD9/PTGS2/RAB29/RAPGEF3/RBM22/SAR1B/SEC16B/CRYZL2P-SEC16B/SOX4/TCF7L2/TCP1/TGFB2/TGFB3/TMEM30A/TMEM30B/TOMM7/UBL5/ZC3H12A/ZIC1
## GO:0070482 ADM/AGTRAP/AIFM1/AJUBA/AK4/ANG/ANGPTL4/AQP1/AQP3/ATG7/ATM/ATP1B1/ATP6AP1/ATP6V0D1/ATP6V1G1/BECN1/BMP2/BNIP3/CA9/CCDC115/CD38/CFLAR/CHCHD2/CHRNA7/CITED2/CRYAB/DDAH1/DDIT4/EDN1/EDNRA/EEF2K/EGLN1/EGLN3/EGR1/ENDOG/ENO1/EPAS1/ERO1A/FAM162A/FAS/FOXO1/GUCY1A1/HIF1A/HILPDA/HK2/HYOU1/KCNMA1/LMNA/MTOR/NKX3-1/NOL3/NOS2/NR4A2/OXTR/P4HB/PCK1/PDK1/PGK1/PIK3CB/PLAT/PLK3/PLOD1/PLOD2/PTGIS/PTGS2/RHOA/ROCK2/RORA/SCAP/SFRP1/SIRT2/SLC11A2/SLC29A1/SLC2A1/SLC8A3/SOD2/STC1/STC2/TFRC/TGFB2/TGFB3/TIGAR/TXN2/ZFP36L1
## GO:0072521 AADAT/ABHD14B/ACLY/ACOT11/ACSBG2/ACSL3/ACSL4/ADORA2B/ADPGK/AK2/AK3/AK4/ALDOA/AMD1/AMPD3/ARL2/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/DCAKD/DDIT4/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/ENO2/ENO4/ENTPD7/FAR1/FITM2/GAPDH/GPI/GUCY1A1/HDAC4/HIF1A/HK2/LACC1/LDHA/MACROD1/MCCC2/MCEE/MTHFD2L/NME1/NOS2/NPR1/NUDT19/NUDT4/NUDT9/OGT/P2RX7/PAICS/PAPSS1/PAPSS2/PDE10A/PDE4B/PDE4D/PDE5A/PDE7B/PDE8B/PDHB/PDHX/PDK1/PDK4/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PMVK/PPT1/PPT2/PRKAA2/PRKAG2/PRPSAP1/PSEN1/RAB23/RHOA/RORA/SLC2A6/SLC35B2/SUCLA2/SUCLG2/SULT1C4/TIGAR/TJP2/TPI1/TPST1/VCP
## GO:0010506 ABL1/ABL2/ATG14/ATG7/ATM/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1G1/ATP6V1G2/ATP6V1H/BECN1/BMF/BNIP3/BOK/CDK5/CHMP4B/CISD1/CISD2/CSNK2A2/DAPK2/DDIT3/DEPP1/DHRSX/DRAM1/ENDOG/EXOC1/EXOC7/FOXO1/GAPDH/GPR137/GPSM1/HIF1A/HSPB1/IFI16/IKBKG/IL10RA/KDR/LAMP3/LRSAM1/MAPK15/MTOR/NOD2/OPTN/OSBPL7/PAFAH1B2/PARK7/PHF23/PIK3CB/PIM2/PLEKHF1/PLK3/PRKAA2/PRKD1/QSOX1/RAB39B/RAB3GAP1/RIPK2/RNF152/ROCK1/SCOC/SEC22B/SESN2/SESN3/SIRT2/SLC25A5/SMG1/SNX30/SPTLC2/STING1/TAB2/TFEB/TIGAR/TP53INP2/TPCN1/TRIB3/TRIM5/TRIM8/UBQLN2/VDAC1/VPS13C/WDR6/WIPI1/ZC3H12A
## GO:0071496 ADORA2B/AGT/AIFM1/AKR1C3/AQP1/AQP3/ATG14/ATG7/ATP1A2/BAK1/BECN1/BMP6/BNIP3/CDKN2B/CYP24A1/DNAJC15/EIF2S1/FADD/FAM107A/FAS/FBXO22/FES/FOS/FOXO1/GABARAPL1/GABARAPL2/GAS6/GLRX2/HABP4/IFI16/IL15/IRF1/JMY/KCNJ2/KIF26A/MAP1LC3C/MAP3K14/MAP3K5/MFSD2A/MTOR/MYBBP1A/NFKB1/NR4A2/NUAK2/P2RX7/PCK1/PCSK9/PDK4/PLEC/PRKAA2/PRKAG2/PRKD1/PTGER4/PTGS2/RNF152/SESN2/SESN3/SFRP1/SFRP2/SIK1/SIK2/SLC2A1/SLC38A2/SLC39A4/SNW1/SOX9/SRD5A1/TFEB/TLE5/TMEM150C/TNFRSF10B/TNFRSF8/TNFSF14/TXN2/UCN2/UPP1/WDR45B/WIPI1/WNT2B/ZC3H12A
## GO:0072594 AGT/AIFM1/ANGPT1/APPL1/APPL2/ATP5IF1/BAG4/BCL3/BID/CACNG4/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CHMP4B/CHP1/CSNK2A2/DDIT3/DNAJA1/DNAJC15/E2F3/FERMT1/FGF9/GLI3/GNPTAB/GRPEL1/HK2/HPS4/HSPA4/HYAL2/IL10RA/IPO5/JUP/KPNA3/LAMP3/LAMP5/LAPTM5/LEPROT/LMNA/LRSAM1/MAN1A1/MFF/MFN2/MMP12/NCOA4/NDUFA13/NFKBIA/NOLC1/NXT2/PDCD5/PEX14/PEX2/PIH1D1/PRKCD/PRKD1/PSEN1/PTGS2/RAB23/RAB3GAP1/RALA/RANGRF/RBM22/RNF215/ROMO1/SAMM50/SCARB2/SEC61B/SEC61G/SMURF1/SNF8/SPCS1/SPCS3/SRP14/SRP19/SRPRA/SRPRB/SSR3/SUFU/TCP1/TIMM10B/TIMM13/TIMM17A/TIMM21/TIMM22/TIMM23/TIMM8B/TNFAIP3/TOMM40/TOMM5/TOMM7/TRAF3IP2/TRAM2/UBL5/VPS13A/VPS13C/VPS25/VPS36/VPS37C/ZC3H12A/ZFAND2B/ZIC1
## GO:0033157 ANGPT1/ANK3/ATP5IF1/BAG4/C2CD5/CDK5/CHP1/CSNK2A2/DERL2/EDEM2/MMP24-AS1-EDEM2/ERBB2/ERLEC1/FERMT1/FYN/GAS6/GLI3/HPS4/HYAL2/ICE1/IFI27/IPO5/JUP/LEPROT/MFF/MYO1C/NOLC1/OAZ1/OAZ2/PARK7/PCM1/PCNT/PDCD5/PDZK1/PLK3/PRKCD/PRKD1/PRR5L/PSEN1/PTGS2/PTPN1/PTPN11/RAB23/RAB29/RANGAP1/RAPGEF3/RBM22/SAR1B/SEC16B/CRYZL2P-SEC16B/SH3TC2/SUFU/TAMALIN/TCF7L2/TMEM30A/TMEM30B/TOMM7/TXN/UBL5/UHMK1/ZC3H12A/ZIC1
## GO:0009101 ABCA2/ALG2/ALG3/ALG5/ALG8/ALG9/B3GALT1/B3GALT2/B3GNT2/B3GNT7/B4GALT1/B4GALT4/B4GALT5/B4GAT1/C1GALT1/C1GALT1C1/C1GALT1C1L/CCR7/CHP1/CHPF2/CHST10/CHST12/CHST7/CSGALNACT1/CYTL1/DOLK/DPAGT1/DSE/DSEL/EDEM3/EXT2/FKTN/FOXL1/FUT11/GAL3ST2/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/GFPT2/GLCE/HS6ST1/IL15/IL33/ITM2A/MAN1A1/MAN1C1/MGAT1/MGAT4A/MGAT5/MLEC/NCSTN/NUS1/OGA/OGT/OSTC/PHLDA1/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/PSEN1/RAMP1/RPN1/RPN2/SLC39A8/ST3GAL1/ST3GAL4/ST3GAL5/ST6GALNAC4/STT3B/TCF7L2/TMEM165/TMTC3/TNIP1/UGDH/UST/XXYLT1
## GO:0016236 ATG14/ATG3/ATG7/ATP2A2/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1G1/ATP6V1G2/ATP6V1H/AUP1/BECN1/BNIP3/CDK5/CHMP1B/CHMP4B/CHMP5/DDRGK1/EMC6/EPG5/EXOC1/EXOC7/GABARAPL1/GABARAPL2/GAPDH/GPSM1/HDAC10/HIF1A/IKBKG/KDR/LRSAM1/MAP1LC3C/MCOLN1/MFN2/MTOR/NOD2/OPTN/PAFAH1B2/PHF23/PRKAA2/PSEN1/QSOX1/RAB23/RAB33B/RAB3GAP1/RIPK2/RUBCNL/SCOC/SEC22B/SESN2/SESN3/SLC25A5/SMG1/SMURF1/SNF8/SNX30/SPTLC2/STAM2/STING1/TBC1D12/TCIRG1/TIGAR/TOMM7/TP53INP2/UBQLN2/UBXN2B/VCP/VDAC1/VMP1/VPS13C/VPS25/VPS36/VPS37C/WDFY3/WDR45B/WIPI1
## GO:0071472 AKR1B1/AQP1/CAPN3/EFHD1/LETM1/SLC12A6/SLC25A23/XRCC5/ZFP36L1
## GO:0071384 AIFM1/AKR1C3/AQP1/ATP5F1A/CFLAR/DDIT4/EDN1/EIF4E/FAM107A/FBXO32/GJB2/GPER1/KLF9/MSTN/NR3C1/PCK1/PCK2/PLAT/SERPINF1/SRD5A1/SSTR5/STC1/ZFP36/ZFP36L1
## GO:2001233 ADORA2A/AGT/ARHGEF2/ASAH2/BCL2L1/BCL2L2/BDNF/BECN1/BID/BOK/CFLAR/COL2A1/CSF2/CSNK2A2/CYLD/DAPK2/DBH/DDIT3/DEPTOR/DNAJA1/EIF5A/ELL3/ENO1/EYA2/FADD/FAIM2/FAS/FBH1/FEM1B/FGF10/G0S2/GPER1/GRINA/GSTP1/HDAC1/HIF1A/HSPB1/HYAL2/HYOU1/ICAM1/IFI6/IL7/INHBA/ITGAV/ITPRIP/LMNA/MIF/NDUFA13/NKX3-1/NOC2L/NOL3/NR4A2/P4HB/PARK7/PDIA3/PF4/PIH1D1/PIK3CB/PLEKHF1/PPIF/PPP2R1B/PRDX2/PRKCD/PSEN1/PSMD10/PSME3/PTGS2/PTPMT1/PTPN1/SCG2/SELENOS/SFRP1/SFRP2/SIAH1/SIAH2/SLC25A5/SOD2/STYXL1/TCF7L2/TGFBR1/TIMP3/TNFAIP3/TNFSF10/TNFSF12/TPD52L1/TRAF2/VDAC2/VNN1/YAP1/ZNF385A
## GO:0006979 ABL1/AIFM1/AIFM2/AKR1C3/ANGPTL7/AQP1/ATOX1/ATP2A2/BAK1/BECN1/BNIP3/BRF2/CA3/CD38/CHCHD2/CHUK/CRYAB/CYB5B/CYP2E1/DHCR24/EDN1/EDNRA/EIF2S1/ENDOG/EPAS1/ERCC2/ERO1A/FOS/FOXO1/FYN/GCH1/GJB2/GLRX2/GPR37L1/GSR/GSS/GSTP1/HIF1A/HSPB1/HYAL2/IL6/KLF2/MAP3K5/MAPKAP1/MCTP1/MGST1/MMP3/MPV17/NCOA7/NDUFB4/NDUFS8/NEIL1/NOL3/NR4A2/NR4A3/P4HB/PARK7/PDK1/PLA2R1/PLEKHA1/PLK3/PNPLA8/PON2/PPIF/PPP2CB/PRDX1/PRDX2/PRDX3/PRKAA2/PRKCD/PRKD1/PRODH/PRR5L/PSEN1/PSIP1/PSMB5/PTGS1/PTGS2/PTPRK/PXDN/PYCR1/PYCR2/RBPMS/RCAN1/ROMO1/SELENOK/SELENOS/SESN2/SESN3/SGK2/SIRPA/SIRT2/SOD2/STAT1/STC2/TNFAIP3/TOR1A/TPM1/TXN/TXN2/VNN1/ZC3H12A
## GO:0036293 ADM/AGTRAP/AIFM1/AJUBA/AK4/ANG/ANGPTL4/AQP1/AQP3/ATM/ATP1B1/BECN1/BMP2/BNIP3/CA9/CD38/CFLAR/CHCHD2/CHRNA7/CITED2/CRYAB/DDAH1/DDIT4/EDN1/EDNRA/EEF2K/EGLN1/EGLN3/EGR1/ENDOG/ENO1/EPAS1/ERO1A/FAM162A/HIF1A/HILPDA/HK2/HYOU1/KCNMA1/LMNA/MTOR/NKX3-1/NOL3/NOS2/NR4A2/OXTR/P4HB/PCK1/PDK1/PGK1/PIK3CB/PLAT/PLK3/PLOD1/PLOD2/PTGIS/PTGS2/RHOA/ROCK2/RORA/SCAP/SFRP1/SIRT2/SLC11A2/SLC29A1/SLC2A1/SLC8A3/SOD2/STC1/STC2/TFRC/TGFB2/TGFB3/TIGAR/TXN2/ZFP36L1
## GO:1901653 ADIPOR1/AGT/AGTRAP/AHCYL1/AP3S1/APPL1/APPL2/ARHGEF2/ATP1A3/BCL2L2/C2CD5/CA2/CACNB1/CAMK2A/CCND3/CDK5/CFLAR/CHMP5/EDN1/EDNRA/EEF2K/EPHB2/EPRS1/FBN1/FOXC2/FOXO1/FYN/GAB1/GDF15/GJA1/GJB2/GLP2R/GPER1/GRB10/HDAC5/ICAM1/INSIG2/IRS1/KLF2/LEPROT/LEPROTL1/LPIN1/MAP1B/MSTN/MYO1C/NFKB1/NKX6-1/NOD2/NR4A2/NR4A3/OGT/OSBPL8/PCK1/PCK2/PCSK9/PDE3B/PDK4/PID1/PIK3R3/PKM/PLAT/PRKCD/PRKCI/PRKCZ/PSEN1/PTPN1/PTPN11/PTPRE/RAB13/RANGAP1/RIPK2/ROCK1/ROCK2/SELENOS/SESN3/SIK2/SLC29A2/SLC39A14/SRD5A1/STAT1/STAT5B/TNS2/TRIB3/TSHR/VIM/YWHAG/ZFP36L1/ZNF106
## GO:0060348 ATP6AP1/BGN/BMP2/BMP6/BPNT2/CCDC154/CCN4/CHAD/CITED2/COL2A1/COL3A1/CSGALNACT1/CTC1/EPYC/EXT2/FBN1/FGF18/FGFR2/FGFR3/FLI1/FOXN3/GJA1/GLI3/INSIG2/KDR/LOX/MAP2K6/MAPK11/MBTPS2/MCPH1/MEF2C/MEGF8/MPIG6B/MYOC/NAB1/NAB2/PAPSS2/PTGER4/PTPN11/RAB23/RARA/RARB/RARG/RFLNA/ZNF664-RFLNA/RHOA/SFRP2/SH3PXD2B/SKI/SOX9/SRD5A1/STC1/SULF2/TGFB3/THBS3/TMEM119/TSKU/TTC9/TULP3/WASF2/ZNF385A
## GO:0097191 AGT/ARHGEF2/BAK1/BCL2A1/BCL2L1/BCL2L2/BID/BOK/CFLAR/COL2A1/CSF2/CYLD/DBH/DDX47/DEPTOR/EYA2/FADD/FAIM2/FAS/FEM1B/FGF10/FGFR3/G0S2/GPER1/GSTP1/HYAL2/ICAM1/IFI27/IFI6/IL7/INHBA/ITGAV/ITPRIP/KITLG/LMNA/MLLT11/NDUFA13/NOL3/P2RX7/PARK7/PDIA3/PF4/PPP2R1B/PRDX2/PSME3/SCG2/SFRP1/SFRP2/SIAH2/TCF7L2/TGFB2/TGFBR1/TIMP3/TNFAIP3/TNFRSF10B/TNFRSF1B/TNFSF10/TNFSF12/TRAF2/YAP1
## GO:0001666 ADM/AGTRAP/AJUBA/AK4/ANG/ANGPTL4/AQP1/AQP3/ATM/ATP1B1/BECN1/BMP2/BNIP3/CA9/CD38/CFLAR/CHCHD2/CHRNA7/CITED2/CRYAB/DDAH1/DDIT4/EDN1/EDNRA/EGLN1/EGLN3/EGR1/ENDOG/ENO1/EPAS1/ERO1A/FAM162A/HIF1A/HILPDA/HK2/HYOU1/KCNMA1/LMNA/MTOR/NKX3-1/NOL3/NOS2/NR4A2/P4HB/PCK1/PDK1/PGK1/PIK3CB/PLAT/PLK3/PLOD1/PLOD2/PTGIS/PTGS2/RHOA/ROCK2/RORA/SCAP/SFRP1/SIRT2/SLC11A2/SLC29A1/SLC2A1/SLC8A3/SOD2/STC1/STC2/TFRC/TGFB2/TGFB3/TIGAR/TXN2/ZFP36L1
## GO:0052548 ABCA2/ADORA2A/ADRM1/AGT/AIFM1/AQP1/ASPH/ATP2A3/BAK1/BID/BIRC3/BOK/BST2/C3/C5/CD109/CFLAR/COL4A3/COL7A1/CPAMD8/CRYAB/CST6/CYCS/DHCR24/DLC1/EGLN3/F2R/F3/FADD/FAM162A/FAS/FURIN/FYN/GAPDH/GAS6/GPER1/GPI/GSN/HDAC1/HSPE1/IFI16/IFI6/IGBP1/ITIH3/ITIH5/LAMP3/LAMTOR5/LAPTM5/LGALS9/MAP3K5/MBP/MICAL1/MTCH1/MUL1/NCSTN/NDUFA13/NKX3-1/NOL3/PARK7/PDCD5/PERP/PI3/PIH1D1/PRDX3/PROS1/PSMA3/PSMB8/PSMB9/PSMD14/PSME1/PSME2/PSME3/PTGS2/RHOA/RIPK2/ROCK1/ROCK2/SERPINB7/SERPINE2/SERPINF1/SERPINI1/SFRP2/SIAH2/SLPI/SPINK13/SPINK6/SPINT1/TBC1D10A/TFPI/TFPI2/TIMP2/TIMP3/TIMP4/TNFSF10/TNFSF14/UACA/USP14/VCP/VSIR/WFDC1
## GO:1901652 ADIPOR1/ADM/AGT/AGTRAP/AHCYL1/AP3S1/APPL1/APPL2/ARHGEF2/ATP1A3/BCL2L2/C2CD5/CA2/CACNB1/CAMK2A/CCND3/CDK5/CFLAR/CHMP5/CHRNA7/COL3A1/CREB1/EDN1/EDNRA/EDNRB/EEF2K/EGR1/EPHB2/EPRS1/FBN1/FOXC2/FOXO1/FYN/GAB1/GDF15/GJA1/GJB2/GLP2R/GNAI1/GPER1/GRB10/HDAC5/ICAM1/INSIG2/IRS1/KHK/KLF2/LEPROT/LEPROTL1/LPIN1/MAP1B/MMP12/MMP3/MSTN/MTOR/MYO1C/NFKB1/NFKBIA/NKX6-1/NOD2/NR4A2/NR4A3/OGT/OSBPL8/OXTR/PCK1/PCK2/PCSK9/PDE3B/PDK4/PID1/PIK3R3/PKM/PLAT/PRKCD/PRKCI/PRKCZ/PSEN1/PTGS2/PTPN1/PTPN11/PTPRE/RAB13/RANGAP1/RIPK2/ROCK1/ROCK2/SCAP/SELENOS/SERPINF1/SESN2/SESN3/SIK2/SLC29A2/SLC2A1/SLC39A14/SRD5A1/STAT1/STAT4/STAT5B/STC2/TIMP4/TNFAIP3/TNS2/TRIB3/TRIM16/TSHR/VIM/VPS13C/YWHAG/ZFP36L1/ZNF106
## GO:0036294 AIFM1/AJUBA/AK4/AQP1/AQP3/BNIP3/CFLAR/CHCHD2/CITED2/DDAH1/EDN1/EEF2K/EGLN1/EGLN3/EGR1/ENDOG/ENO1/EPAS1/ERO1A/FAM162A/HIF1A/HILPDA/HYOU1/LMNA/MTOR/NKX3-1/NOL3/P4HB/PCK1/PDK1/PGK1/PIK3CB/PLK3/PTGIS/PTGS2/ROCK2/RORA/SFRP1/SIRT2/SLC29A1/SLC8A3/STC1/STC2/TIGAR/ZFP36L1
## GO:0002931 AIFM1/BCL2L2/CAMK2A/CSF1/EEF2K/EGR1/FAIM2/GJB2/HK2/HYOU1/MAP2K3/MAP2K6/MAP3K5/NOL3/P2RX7/PANX1/PER2/PIK3CB/PPIF/RCAN1/ROCK2/TIGAR
## GO:0007249 ABL1/AJUBA/ANGPT1/BCL3/BIRC3/BST2/CAPN3/CCR7/CFLAR/CHUK/DDRGK1/EDN1/EDNRA/EDNRB/F2R/FADD/FKBP1A/FYN/GAPDH/GJA1/GSTP1/HDAC1/HSPB1/IFIT5/IKBKG/IRAK1BP1/IRAK2/IRAK4/LAMTOR5/LGALS9/LIME1/LURAP1L/MAP3K14/MAP3K3/MUL1/MYO18A/NFKBIA/NFKBIB/NKIRAS2/NOD2/NR1D1/OPTN/PELI1/PIM2/PRKD1/RELB/RHOA/RIPK2/ROCK1/ROCK2/RORA/SHISA5/SIRPA/SLC35B2/STAT1/TAB2/TFG/TFRC/TIFA/TLE1/TNFAIP3/TNFRSF10B/TNFSF10/TNIP1/TRAF2/TRAF3/TRAF3IP2/TRIM5/TRIM8/UBE2N/UNC5CL/WNT5A/ZC3H12A
## GO:0071456 AJUBA/AK4/AQP1/AQP3/BNIP3/CFLAR/CHCHD2/CITED2/DDAH1/EDN1/EGLN1/EGLN3/EGR1/ENDOG/ENO1/EPAS1/ERO1A/FAM162A/HIF1A/HILPDA/HYOU1/LMNA/MTOR/NKX3-1/NOL3/P4HB/PCK1/PDK1/PGK1/PIK3CB/PLK3/PTGIS/PTGS2/ROCK2/RORA/SFRP1/SIRT2/SLC29A1/SLC8A3/STC1/STC2/TIGAR/ZFP36L1
## GO:1901654 ABHD2/AIFM1/AKR1C2/AKR1C3/AQP1/ATP5F1A/BCL2L1/CA9/CCR7/CD38/CFLAR/CLDN1/DDIT4/EDN1/EIF4E/F5/FBXO32/FIBIN/FOS/FOSB/GAS6/GJB2/GNAI1/GPI/HOXA13/IGFBP7/KLF2/KLF9/MAOB/MBP/MSTN/NCOA4/NKX3-1/NR1H3/NR3C1/OXTR/P2RY6/PARK7/PCK1/PCK2/PLAT/PRKAA2/PTGER4/PTGFR/ROCK2/SERPINF1/SFRP1/SPP1/SRD5A1/TBXA2R/TGFB2/TGFB3/YAP1
## GO:0019751 ABCA2/ACER3/ADCYAP1R1/ASAH1/ASAH2/ASAH2B/BPNT2/COQ2/DEGS2/GCH1/GK/GPD2/GPER1/HRH1/IP6K1/IPMK/IPPK/ISYNA1/ITPK1/MINPP1/NAAA/NUDT4/OCRL/P2RY6/PCK1/PCK2/PLA2G4A/PPIP5K2/PTH1R/PTS/QDPR/SORD/SPTLC2/SPTSSA/SPTSSB/TKFC/TPI1
## GO:0046031 ADPGK/AK2/AK3/AK4/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NUDT9/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TPI1
## GO:0097193 ABL1/AEN/AIFM1/ARHGEF2/ATM/ATP2A3/BAK1/BCL2A1/BCL2L1/BCL2L2/BCL3/BECN1/BID/BNIP3/BOK/CEBPB/CHEK2/CRIP1/CYLD/DAPK2/DDIT3/DDIT4/DDX5/DNAJA1/DYRK2/EIF5A/ELL3/ENO1/ERO1A/FBH1/GRINA/HDAC1/HIF1A/HSPB1/HYOU1/IFI16/IFI6/JMY/MAP3K5/MIF/MLLT11/MYBBP1A/NDUFA13/NKX3-1/NOC2L/NOL3/P4HB/PARK7/PDK1/PERP/PIK3CB/PLEKHF1/PPIF/PPP1R15A/PRKCD/PRODH/PTGS2/PTPMT1/PTPN1/SELENOK/SELENOS/SFRP2/SHISA5/SIAH1/SNW1/SOD2/STYXL1/TNFRSF10B/TNFRSF1B/TRAF2/TRIB3/VDAC2/VNN1/ZNF385A
## GO:2001236 AGT/ARHGEF2/BCL2L1/BID/CFLAR/COL2A1/CSF2/CYLD/DBH/DEPTOR/EYA2/FADD/FAIM2/FEM1B/FGF10/G0S2/GPER1/GSTP1/HYAL2/ICAM1/IFI6/IL7/INHBA/ITGAV/ITPRIP/LMNA/NOL3/PARK7/PDIA3/PF4/PPP2R1B/PRDX2/PSME3/SCG2/SFRP1/SFRP2/SIAH2/TCF7L2/TGFBR1/TIMP3/TNFAIP3/TNFSF10/TNFSF12/TRAF2/YAP1
## GO:0055119 ATP1A1/ATP1A2/ATP1B1/CAMK2D/GSN/GSTM2/KCNJ2/PDE4B/PDE4D/PDE5A/RGS2
## GO:1903522 ABL1/ADM/ADM2/AGT/APLN/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/CACNA1C/CAMK2D/CD38/CORIN/DBH/DES/DMPK/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/EPAS1/F2R/FXYD1/GCH1/GJA1/GJD3/GLRX3/GPD1L/GSTM2/GSTO1/HRH1/HSPB7/JUP/KCND3/KCNE4/KCNJ2/KCNMB2/KCNMB4/MEF2A/MTNR1B/OXTR/PDE4B/PDE4D/PDE5A/PER2/PTGS2/RANGRF/RGS2/RHOA/SCN2B/SCN4B/SEMA3A/SLC8A3/SPX/STC1/TBX18/TBXA2R/TGFB2/THRB/TNNT2/TPM1/ZC3H12A
## GO:0071549 AQP1/ATP5F1A/CFLAR/DDIT4/EIF4E/FBXO32/GJB2/MSTN/NR3C1/PCK1/PCK2/PLAT/SERPINF1/SRD5A1
## GO:0030199 ADAMTS2/AEBP1/BMP1/CHADL/COL11A2/COL12A1/COL2A1/COL3A1/COL5A2/COLGALT2/DPT/FKBP10/FOXC2/LOX/LOXL3/LOXL4/LUM/P3H4/P4HA1/PXDN/SFRP2/TGFB2/TGFBR1/TNXB
## GO:0032386 ABCA2/ANGPT1/ANK3/ARHGAP1/ATP5IF1/ATP9A/BAG4/C2CD5/CDK5/CHP1/CRYAB/CSNK2A2/DERL2/EDEM2/MMP24-AS1-EDEM2/EHD1/EIPR1/ERBB2/ERLEC1/FERMT1/FYN/GAS1/GAS6/GLI3/HPS4/HYAL2/ICE1/IFI27/IPO5/JUP/LEPROT/MAP1B/MAP2K1/MAPK15/MFF/MYO1C/NOLC1/NUMA1/NUS1/OAZ1/OAZ2/PARK7/PCM1/PCNT/PCSK9/PDCD5/PDZK1/PLK3/PRKCD/PRKD1/PRR5L/PSEN1/PTGS2/PTPN1/PTPN11/RAB23/RAB29/RANGAP1/RAPGEF3/RBM22/RBM4/REEP5/REEP6/SAR1B/SEC16B/CRYZL2P-SEC16B/SH3TC2/SUFU/TAMALIN/TCF7L2/TMEM30A/TMEM30B/TNNC1/TNNT2/TOMM7/TXN/UBL5/UHMK1/WWC1/ZC3H12A/ZIC1
## GO:0045862 ADRM1/AIFM1/ANTXR1/ASPH/ATP2A3/ATP5IF1/ATXN3/AURKAIP1/BAG2/BAK1/BID/BOK/CAPN3/CFLAR/CLEC3B/COL4A3/CSNK1D/CSNK1E/CYCS/DDA1/DDRGK1/DLC1/EGLN3/ENO1/F2R/F3/FADD/FAM162A/FAS/FBXO22/FURIN/FYN/GPER1/GSN/HSPE1/IFI16/LAPTM5/LGALS9/LPCAT3/MAGEF1/MAP3K5/MBP/MTCH1/MUL1/NCSTN/NDUFA13/NKX3-1/OGT/OSBPL7/PCOLCE/PDCD5/PERP/PIAS1/PLGRKT/PLK3/PSEN1/PSMC4/PSMC5/PSMD10/PSMD14/PSME1/PSME2/PSME3/RAD23A/RGMA/RHOA/RIPK2/RNF180/RNF19A/ROCK2/SFRP2/SH3RF2/SIRT2/SMURF1/SNX9/SPON1/TBC1D10A/TMEM259/TMTC3/TNFRSF1B/TNFSF10/TNIP1/TRIB3/UACA/UBQLN2/VCP/VSIR/ZC3H12A
## GO:0032092 ABL1/ADD1/AKTIP/B2M/BAMBI/BDNF/BMP2/CAPRIN2/CDK5/CSF3/DERL1/EPB41/EPB41L5/FKBP1A/FLOT1/LFNG/MFNG/PKD1/PLCL1/PPP2CB/PSEN1/RFNG/RIPK2/SPAG8/SPON1/STING1/TCF7L2/TRIB3/WNT5A
## GO:0071222 ABCA1/ABL1/BMP6/CCL2/CCL3/CCL5/CD274/CD55/CEBPB/CHMP5/CSF2/CSF3/CTR9/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/EDNRB/EPHB2/GSTP1/HCK/IL6/IRAK2/LBP/MAP2K3/MEF2C/MIF/NFKB1/NFKBIA/NFKBIB/NOD2/NOS2/NR1D1/NR1H3/PDCD1LG2/PDCD4/PDE4B/PF4/PF4V1/PRDX2/RARA/RHOA/RIPK2/SELENOS/SIRPA/SPON2/TBXA2R/TNFAIP3/TNFRSF1B/TNIP1/TRIM5/VIM/WNT5A/ZC3H12A/ZFP36
## GO:0051881 ABL1/ADORA2A/ATP5IF1/BAK1/BCL2L1/BID/BNIP3/BOK/CCN6/IFI6/KDR/MLLT11/MUL1/MYOC/NDUFS1/P2RX7/PARK7/PID1/PPA2/PRDX3/PYCR1/RNF122/RTL10/SOD2/TUSC2/VCP
## GO:0051222 ACSL3/ACSL4/ADORA2A/ANG/ANK3/APBB3/BMP6/C1QTNF3/C2CD2L/C2CD5/CD38/CDK5/CHP1/CSNK2A2/DOC2B/EDEM2/MMP24-AS1-EDEM2/ERBB2/EXOC1/EXPH5/FYN/GAS6/GLI3/GPER1/HIF1A/HPS4/HYAL2/ICE1/IER3IP1/IPO5/JUP/KCNN4/LEPROT/MFF/MYO18A/MYO1C/NKX6-1/NLGN2/NR1H2/OAZ1/OAZ2/P2RX7/PARD6A/PCK2/PCM1/PCNT/PDCD5/PDZK1/PLA2G6/PLK3/PRKCD/PRKCZ/PRKD1/PRR5L/PSEN1/PSMD9/PTGS2/RAB29/RAPGEF3/RBM22/SAR1B/SEC16B/CRYZL2P-SEC16B/SOX4/TCF7L2/TGFB2/TGFB3/TMEM30A/TMEM30B/TOMM7/UBL5/ZC3H12A/ZIC1
## GO:1900180 ANGPT1/BYSL/CARD10/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CDK5RAP3/CHP1/DCLK1/FERMT1/FYN/GLI3/GLIS2/HYAL2/IPO5/JUP/LAMTOR5/LIF/LMNA/LZTS2/NOLC1/PARK7/PRKCD/PRKD1/PSEN1/PTGS2/RAB23/RBM22/SESN2/SUFU/TCP1/TFRC/TRIM29/TRIM8/YAP1/ZC3H12A/ZIC1
## GO:1901617 ABCA2/ACER3/ACLY/ADCYAP1R1/AKR1C3/ALDH2/APPL1/ASAH1/ASAH2/ASAH2B/BMP2/BMP6/CH25H/CYP7B1/DBH/DCT/DDT/DHCR24/DHCR7/DKK3/FAXDC2/GATA3/GCH1/GPER1/HRH1/HSD17B10/HSD3B7/INSIG2/IP6K1/IPMK/IPPK/ISYNA1/LPCAT3/LSS/MBTPS2/MFSD12/NFKB1/NR1D1/NR4A2/NUS1/OSBPL3/OSBPL7/OSBPL9/P2RY6/PARK7/PCK1/PCK2/PER2/PMVK/PPIP5K2/PRKAA2/PRKAG2/PTH1R/PTS/QDPR/SCAP/SEC14L2/SPTLC2/SPTSSA/SPTSSB/SQLE/TGFB2/WNT5A
## GO:0071375 ADIPOR1/AGT/AGTRAP/AHCYL1/AP3S1/APPL1/APPL2/C2CD5/CA2/CAMK2A/CCND3/CFLAR/EDN1/EDNRA/EEF2K/EPRS1/FBN1/FOXC2/FOXO1/GAB1/GDF15/GJB2/GLP2R/GPER1/GRB10/HDAC5/INSIG2/IRS1/LEPROT/LEPROTL1/LPIN1/MAP1B/MSTN/MYO1C/NFKB1/NKX6-1/NR4A2/NR4A3/OGT/OSBPL8/PCK1/PCK2/PCSK9/PDE3B/PDK4/PID1/PIK3R3/PKM/PLAT/PRKCD/PRKCI/PRKCZ/PTPN1/PTPN11/PTPRE/RAB13/RANGAP1/ROCK1/ROCK2/SELENOS/SESN3/SIK2/SLC29A2/SLC39A14/SRD5A1/STAT1/STAT5B/TNS2/TRIB3/TSHR/YWHAG/ZFP36L1/ZNF106
## GO:1900182 CARD10/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CDK5RAP3/FYN/GLI3/GLIS2/HYAL2/IPO5/JUP/LAMTOR5/LIF/PARK7/PRKCD/PRKD1/PSEN1/PTGS2/RBM22/SESN2/TCP1/TFRC/TRIM8/YAP1/ZC3H12A/ZIC1
## GO:0030203 ABCC5/ANGPT1/B3GNT2/B3GNT7/B4GALT4/B4GAT1/BGN/BPNT2/CEMIP2/CHPF2/CHST12/CHST2/CHST5/CHST7/CSGALNACT1/DSE/DSEL/EDNRA/EDNRB/EXT2/GALNT5/GLCE/GNS/HAS3/HEXB/HS3ST3A1/HS6ST1/HYAL2/IL15/ITIH3/ITIH5/NFKB1/ST3GAL1/ST3GAL4/TNFAIP6/UGDH/UST
## GO:0006486 ABCA2/ALG2/ALG3/ALG5/ALG8/ALG9/B3GALT1/B3GALT2/B3GNT2/B3GNT7/B4GALT1/B4GALT4/B4GALT5/B4GAT1/C1GALT1/C1GALT1C1/C1GALT1C1L/CHP1/DOLK/DPAGT1/EDEM3/EXT2/FKTN/FUT11/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/GFPT2/IL15/MAN1A1/MAN1C1/MGAT1/MGAT4A/MGAT5/MLEC/NUS1/OGA/OGT/OSTC/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/PSEN1/RAMP1/RPN1/RPN2/SLC39A8/ST3GAL1/ST3GAL4/ST3GAL5/ST6GALNAC4/STT3B/TMEM165/TMTC3/XXYLT1
## GO:0043413 ABCA2/ALG2/ALG3/ALG5/ALG8/ALG9/B3GALT1/B3GALT2/B3GNT2/B3GNT7/B4GALT1/B4GALT4/B4GALT5/B4GAT1/C1GALT1/C1GALT1C1/C1GALT1C1L/CHP1/DOLK/DPAGT1/EDEM3/EXT2/FKTN/FUT11/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/GFPT2/IL15/MAN1A1/MAN1C1/MGAT1/MGAT4A/MGAT5/MLEC/NUS1/OGA/OGT/OSTC/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/PSEN1/RAMP1/RPN1/RPN2/SLC39A8/ST3GAL1/ST3GAL4/ST3GAL5/ST6GALNAC4/STT3B/TMEM165/TMTC3/XXYLT1
## GO:0051767 AKAP12/CCL2/EDN1/GSTP1/IL33/KDR/MAP2K3/MAP2K6/NAMPT/NOD2/SELENOS/STAT1
## GO:0051769 AKAP12/CCL2/EDN1/GSTP1/IL33/KDR/MAP2K3/MAP2K6/NAMPT/NOD2/SELENOS/STAT1
## GO:0052547 ABCA2/ADORA2A/ADRM1/AGT/AIFM1/ANTXR1/AQP1/ASPH/ATP2A3/BAK1/BID/BIRC3/BOK/BST2/C3/C5/CD109/CFLAR/COL4A3/COL7A1/CPAMD8/CRYAB/CST6/CYCS/DDRGK1/DHCR24/DLC1/EGLN3/F2R/F3/FADD/FAM162A/FAS/FURIN/FYN/GAPDH/GAS6/GPER1/GPI/GSN/HDAC1/HSPE1/IFI16/IFI6/IGBP1/ITIH3/ITIH5/LAMP3/LAMTOR5/LAPTM5/LGALS9/MAP3K5/MBP/MICAL1/MTCH1/MUL1/NCSTN/NDUFA13/NKX3-1/NOL3/PARK7/PCOLCE/PDCD5/PERP/PI3/PIH1D1/PRDX3/PROS1/PSMA3/PSMB8/PSMB9/PSMD14/PSME1/PSME2/PSME3/PTGS2/RHOA/RIPK2/ROCK1/ROCK2/SERPINB7/SERPINE2/SERPINF1/SERPINI1/SFRP2/SIAH2/SLPI/SPINK13/SPINK6/SPINT1/TBC1D10A/TFPI/TFPI2/TIMP2/TIMP3/TIMP4/TNFSF10/TNFSF14/UACA/USP14/VCP/VSIR/WFDC1
## GO:0071385 AQP1/ATP5F1A/CFLAR/DDIT4/EDN1/EIF4E/FAM107A/FBXO32/GJB2/KLF9/MSTN/NR3C1/PCK1/PCK2/PLAT/SERPINF1/SRD5A1/SSTR5/STC1/ZFP36/ZFP36L1
## GO:0045444 ADIRF/ALOXE3/ATF5/BBS9/BMP2/BNIP3/C1QTNF3/CCN4/CEBPB/CEBPD/CMKLR1/CREB1/CREBL2/DDIT3/ERO1A/FABP3/FGF10/FOXO1/FRZB/GATA3/GPER1/GRK5/IL11/IL6/JDP2/KLF5/LAMB3/LRRC8C/MEDAG/MKKS/NR1D1/NR4A2/NR4A3/OSBPL8/PER2/PIAS1/PLAC8/PRDM16/PSMB8/PTGS2/RGS2/RORA/SDF4/SFRP1/SFRP2/SIRT2/SIX1/SOD2/SOX8/STEAP4/TCF7L2/TMEM64/TRIB3/TTC8/WIF1/WNT5A/YAP1/ZC3H12A/ZFP36/ZFP36L1/ZNF385A
## GO:0006022 ABCC5/ANGPT1/B3GNT2/B3GNT7/B4GALT4/B4GALT5/B4GAT1/BGN/BPNT2/CEMIP2/CHI3L2/CHPF2/CHST12/CHST2/CHST5/CHST7/CSGALNACT1/DSE/DSEL/EDNRA/EDNRB/EXT2/GALNT5/GLCE/GNS/HAS3/HEXB/HS3ST3A1/HS6ST1/HYAL2/IL15/ITIH3/ITIH5/NFKB1/ST3GAL1/ST3GAL4/TNFAIP6/UGDH/UST
## GO:0071219 ABCA1/ABL1/BMP6/CCL2/CCL3/CCL5/CD274/CD55/CEBPB/CHMP5/CSF2/CSF3/CTR9/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/EDNRB/EPHB2/GSTP1/HCK/IL6/IRAK2/LBP/MAP2K3/MEF2C/MIF/NFKB1/NFKBIA/NFKBIB/NOD2/NOS2/NR1D1/NR1H3/PDCD1LG2/PDCD4/PDE4B/PF4/PF4V1/PRDX2/RARA/RHOA/RIPK2/SELENOS/SIRPA/SIRT2/SPON2/TBXA2R/TNFAIP3/TNFRSF1B/TNIP1/TRIM5/VIM/WNT5A/ZC3H12A/ZFP36
## GO:0070997 AARS1/ABL1/ADARB1/ADORA2A/AIFM1/AKT1S1/ANGPT1/ATM/BCL2L1/BDNF/BID/BNIP3/BOK/BTBD10/CCL2/CCL3/CCL5/CDK5/CEBPB/CHMP4B/CHP1/CHRNA7/CLCF1/CSF1/CSF3/DDIT3/DDIT4/DHCR24/DNAJC5/EGLN3/EGR1/EIF2S1/ENDOG/ENO2/EPHB1/F2R/FADD/FAIM2/FAM162A/FAS/FOS/FYN/GAPDH/GATA3/GPI/GPNMB/HDGF/HIF1A/HYOU1/IKBKG/ITGA1/MAP3K5/MEF2C/MTNR1B/NCOA7/NCSTN/NR4A2/NR4A3/PARK7/PCSK9/PPT1/PRKCI/PSEN1/RAB29/RASA1/RHOA/ROCK1/SARM1/SERPINF1/SIAH1/SIX1/SIX4/SOD2/TGFB2/TGFB3/THRB/TIGAR/TMEM259/TNFRSF1B/TNFRSF21/TRAF2/UBE2M/WNT5A
## GO:0090316 ANK3/C2CD5/CDK5/CHP1/CSNK2A2/EDEM2/MMP24-AS1-EDEM2/ERBB2/FYN/GAS6/GLI3/HPS4/HYAL2/ICE1/IPO5/JUP/LEPROT/MFF/MYO1C/OAZ1/OAZ2/PCM1/PCNT/PDCD5/PDZK1/PLK3/PRKCD/PRKD1/PRR5L/PSEN1/PTGS2/RAB29/RAPGEF3/RBM22/SAR1B/SEC16B/CRYZL2P-SEC16B/TCF7L2/TMEM30A/TMEM30B/TOMM7/UBL5/ZC3H12A/ZIC1
## GO:0071621 AKIRIN1/C1QBP/CAMK1D/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCR7/CMKLR1/CSF1/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/DAPK2/EDN1/HRH1/IL23A/ITGA1/LBP/MSTN/NOD2/PDE4B/PF4/PF4V1/PIK3CD/SAA1/SCG2/TGFB2/THBS4/TNFAIP6/TREM1
## GO:0006936 ADORA2B/AGT/ALDOA/ASPH/ATP1A1/ATP1A2/ATP1B1/ATP2A2/ATP2B4/CACNA1C/CAMK2D/CD38/CERT1/CHRNE/CRYAB/DES/DMPK/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/ENO1/F2R/FXYD1/GJA1/GPD1L/GPER1/GRIP2/GSN/GSTM2/GSTO1/GUCY1A1/HSBP1/JUP/KCNA1/KCND3/KCNE4/KCNJ2/KCNMA1/MAP2K3/MAP2K6/MKKS/MTOR/MYL5/MYL6/MYL6B/OXTR/P2RX6/PDE4B/PDE4D/PDE5A/PGAM2/PLA2G6/PPP1R12B/PTGS2/RANGRF/RGS2/RHOA/ROCK1/ROCK2/SCN2B/SCN4B/SGCA/SLC8A3/SNTB1/SPX/SSPN/STC1/SULF2/SYNM/TBXA2R/TMOD4/TNNC1/TNNC2/TNNI1/TNNT2/TNNT3/TPM1/TPM2/UTRN/ZC3H12A
## GO:0046165 ABCA2/ACER3/ACLY/ADCYAP1R1/ASAH1/ASAH2/ASAH2B/BMP2/BMP6/DBH/DHCR24/DHCR7/DKK3/GCH1/GPER1/HRH1/INSIG2/IP6K1/IPMK/IPPK/ISYNA1/LPCAT3/LSS/MBTPS2/NFKB1/NUS1/P2RY6/PARK7/PCK1/PCK2/PMVK/PPIP5K2/PRKAA2/PTH1R/PTS/QDPR/SCAP/SEC14L2/SPTLC2/SPTSSA/SPTSSB
## GO:0046173 ABCA2/ACER3/ADCYAP1R1/ASAH1/ASAH2/ASAH2B/GCH1/GPER1/HRH1/IP6K1/IPMK/IPPK/ISYNA1/P2RY6/PCK1/PCK2/PPIP5K2/PTH1R/PTS/QDPR/SPTLC2/SPTSSA/SPTSSB
## GO:0043467 AK4/ARL2/BNIP3/CHCHD2/CISD1/COX17/COX7A2/DDIT4/DNAJC15/DYRK2/HDAC4/HIF1A/IFNAR1/IFNLR1/IL10RB/IRS1/KHK/NDUFA4/NOS2/OGT/P2RX7/PARK7/PGAM1/PHKG2/PPIF/PPP1R3B/PPP1R3C/PRDM16/PRKAA2/PRKAG2/PSEN1/RHOA/RUBCNL/SELENOS/SLC25A23/SLC2A6/TIGAR/UQCC2/VCP
## GO:0001819 ABL1/ADORA2B/AGT/AKAP12/APPL1/ARHGEF2/B2M/BATF/BCL3/BTN3A2/C1QTNF3/C3/C5/CCL3/CCR7/CD274/CD55/CD83/CEBPB/CEBPG/CHUK/CSF2/DDIT3/DDT/EGR1/ELANE/EPHB2/F2R/F3/FADD/FERMT1/FLOT1/FURIN/G3BP1/GAPDH/GATA3/HIF1A/HILPDA/HLA-A/HSPB1/HYAL2/IFI16/IFNGR1/IL15/IL16/IL23A/IL26/IL33/IL6/IL7/IRF1/ISG15/LACC1/LAMTOR5/LAPTM5/LBP/LGALS9/LUM/MAPK11/MAPKAPK2/MBP/MCOLN2/MIF/MMP12/NOD2/NOS2/NR4A3/OAS1/P2RX7/PANX1/PARK7/PDE4B/PDE4D/PELI1/PF4/PHB1/PIK3CD/PLA2R1/POU2F2/PRKCZ/PSEN1/PTGER4/PTGS2/PTPN11/PTPRJ/RAB7B/RARA/RASGRP1/RIPK2/ROCK2/RORA/SAA1/SELENOK/SERPINB7/SPON2/STAT1/STAT5B/STING1/STMP1/SULF2/TNFRSF8/TRAF2/TRIM16/TUSC2/WNT5A
## GO:0016241 ATG14/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1G1/ATP6V1G2/ATP6V1H/BECN1/BNIP3/CDK5/CHMP4B/EXOC1/EXOC7/GAPDH/GPSM1/HIF1A/IKBKG/KDR/LRSAM1/MTOR/NOD2/OPTN/PAFAH1B2/PHF23/PRKAA2/QSOX1/RAB3GAP1/RIPK2/SCOC/SEC22B/SESN2/SESN3/SLC25A5/SMG1/SNX30/SPTLC2/STING1/TIGAR/UBQLN2/VDAC1/VPS13C/WIPI1
## GO:0055076 ACO1/ANKRD9/ARF1/ATOX1/ATP6AP1/ATP6V0D1/ATP6V1G1/ATP7B/B2M/BMP6/BOLA2/CCDC115/CYB561A3/CYBRD1/EPAS1/FTH1/GLRX3/HIF1A/HYAL2/LCN2/MT1E/MT1F/MT1G/MT1X/MT2A/NCOA4/SCO2/SLC11A2/SLC25A28/SLC30A1/SLC30A4/SLC39A10/SLC39A14/SLC39A4/SLC39A7/SLC39A8/SOD2/STEAP1/STEAP4/TFRC
## GO:0034350 AKAP12/CCL2/CDK5/GAS6/PRKCD/PRKCH/PRKCI/TRAF2
## GO:0008637 AIFM2/ATG3/ATP5IF1/BAK1/BCL2L1/BCL2L2/BID/BMF/BNIP3/BOK/CAMK2A/EYA2/FAM162A/GPER1/HK2/IFI6/LMNA/MFF/MLLT11/MUL1/NDUFS1/NOL3/NPTX1/PDCD5/PLA2G6/PPIF/PPP2CB/PSMD10/RTL10/SLC25A5/SOD2/TNFSF10/VDAC2
## GO:0051235 ABCA1/ABHD5/ABL1/AKAP6/ANK3/ARHGAP21/ARL2/ATP1A2/ATP7B/AUP1/B4GALNT1/BDKRB1/C3/CACNA1C/CAMK2D/CAPN3/CCL3/CCR7/CDK5/CXCL10/DDIT3/EHD1/ERO1A/F2R/FBN1/FBN2/FITM2/FKBP1A/FTH1/GP1BB/GPER1/GSN/GSTM2/GSTO1/HEXB/HILPDA/HK2/IL6/INSIG2/ITGAV/LCN2/LETM1/LIME1/LTBP1/MCOLN1/MCOLN2/MEST/NFKB1/NFKBIA/NFKBIB/NFKBIE/NOL3/NR1H2/NR1H3/OSBPL8/P2RX7/P2RY6/PARK7/PDE4D/PKD1/PRKD1/PSEN1/PSMD10/RANGAP1/RASA3/SCIN/SKP1/SLC25A23/SLC30A4/SQLE/STAT5B/SUFU/SUN1/TPCN1/TXN/VPS13A/VPS13C/ZC3H12A
## GO:0003012 ADORA2B/AGT/AKAP6/ALDOA/ASPH/ATP1A1/ATP1A2/ATP1B1/ATP2A2/ATP2B4/BECN1/CACNA1C/CAMK2D/CAMTA2/CD38/CERT1/CFLAR/CHRNE/CRYAB/DES/DMPK/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/ENO1/F2R/FBXO32/FOXO1/FXYD1/GJA1/GLRX3/GPD1L/GPER1/GRIP2/GSN/GSTM2/GSTO1/GUCY1A1/HDAC4/HSBP1/IL15/JUP/KCNA1/KCND3/KCNE4/KCNJ2/KCNMA1/LMCD1/LMNA/MAP2K3/MAP2K6/MEF2A/MKKS/MSTN/MTOR/MYL5/MYL6/MYL6B/MYOC/NOL3/NR4A3/OXTR/P2RX6/PDE4B/PDE4D/PDE5A/PGAM2/PLA2G6/PPP1R12B/PTGS2/RANGRF/RGS2/RHOA/ROCK1/ROCK2/SCN2B/SCN4B/SCO2/SGCA/SLC8A3/SNTB1/SPX/SSPN/STC1/SULF2/SYNM/TBXA2R/TMOD4/TNFRSF1B/TNNC1/TNNC2/TNNI1/TNNT2/TNNT3/TPM1/TPM2/UTRN/ZC3H12A
## GO:0015986 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT
## GO:0071383 ABHD2/AIFM1/AKR1C3/AQP1/ATP1A1/ATP1A2/ATP1A3/ATP5F1A/CALCOCO1/CFLAR/CNOT2/CYP7B1/DDIT4/DDRGK1/DDX17/DDX5/DNAAF4/EDN1/EIF4E/FAM107A/FBXO32/FKBP4/GJB2/GPER1/HDAC1/KLF9/MSTN/NCOA4/NKX3-1/NR1D1/NR3C1/NR3C2/NR4A3/PAQR8/PARK7/PCK1/PCK2/PHB1/PLAT/PMEPA1/PRMT2/RHOA/SAFB/SERPINF1/SFRP1/SRD5A1/SSTR5/STC1/TCF21/TFPI/YAP1/ZFP36/ZFP36L1
## GO:1901655 AIFM1/AKR1C2/AKR1C3/AQP1/ATP5F1A/CFLAR/DDIT4/EIF4E/FBXO32/GAS6/GJB2/GNAI1/KLF2/KLF9/MSTN/NCOA4/NR3C1/P2RY6/PARK7/PCK1/PCK2/PLAT/PRKAA2/PTGER4/PTGFR/ROCK2/SERPINF1/SFRP1/SPP1/SRD5A1
## GO:0009135 ADPGK/AK2/AK3/AK4/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NUDT9/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TJP2/TPI1
## GO:0009179 ADPGK/AK2/AK3/AK4/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NUDT9/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TJP2/TPI1
## GO:0006096 ADPGK/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TPI1
## GO:0070085 ABCA2/ALG2/ALG3/ALG5/ALG8/ALG9/B3GALT1/B3GALT2/B3GNT2/B3GNT7/B4GALNT1/B4GALT1/B4GALT4/B4GALT5/B4GAT1/C1GALT1/C1GALT1C1/C1GALT1C1L/CHP1/DOLK/DPAGT1/EDEM3/EXT2/FKTN/FUT11/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/GFPT2/IL15/MAN1A1/MAN1C1/MGAT1/MGAT4A/MGAT5/MLEC/NUS1/OGA/OGT/OSTC/PIGV/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/PSEN1/RAMP1/RPN1/RPN2/SLC39A8/ST3GAL1/ST3GAL4/ST3GAL5/ST6GALNAC4/STT3B/TMEM165/TMTC3/XXYLT1
## GO:0045936 ABCA2/ABL1/ADARB1/ADORA2A/AGT/AJUBA/AKT1S1/ANGPT1/ANKLE2/ATG14/BAG4/BAK1/BDKRB1/BMP2/CD109/CDK5RAP1/CDK5RAP3/CDKN2B/CHP1/CTDSP2/CTDSPL/DBNDD2/DDIT4/DEPTOR/DNAJA1/DNAJC3/DUSP1/DUSP16/DUSP3/EPHB2/FKBP1A/GADD45B/GPD1L/GPRC5A/GRB10/GSTP1/HDAC4/HSPB1/HYAL2/INHA/INHBA/IPO5/IQGAP1/KIRREL1/LDLRAD4/LPCAT1/LPIN1/MGAT5/MICAL1/MLLT1/MSTN/MYADM/NIBAN1/PARD6A/PARK7/PDCD4/PDE4D/PID1/PIK3CB/PLEC/PMEPA1/PPM1E/PPP1R15A/PPP1R26/PPP2R5A/PPP4R2/PPP4R4/PRDX3/PRKAG2/PRKCD/PRKCZ/PRR5L/PSEN1/PTPN1/PTPN13/PTPRJ/RABGEF1/RGS2/ROCK1/ROCK2/RTRAF/SFRP1/SFRP2/SIRPA/SIRT2/SLC8A3/SNX25/SPAG9/STYXL1/SWAP70/TGFB2/TIGAR/TNFAIP3/TRIB3/VPS25/WARS1/YWHAG/ZC3H12A
## GO:0009260 ACLY/ACSBG2/ACSL3/ACSL4/AK2/AK3/AK4/ALDOA/AMPD3/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/GUCY1A1/NME1/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/RFK/SLC35B2/UCK2/UPP1/VCP
## GO:1905952 ABCA1/ABCA2/ABCA3/ABHD5/AGT/ATP8A1/BMP6/C1QTNF1/C3/DENND5B/EDN1/EHD1/EPRS1/FABP3/FITM2/FURIN/HILPDA/IL6/ITGAV/LIPG/LPCAT3/MAP2K6/MIF/NFKB1/NFKBIA/NKX3-1/NR1H2/NR1H3/NUS1/OSBPL8/P2RX7/PCSK9/PLA2G4A/PLA2G6/PLA2R1/PRKCD/PTGES/PTPN11/SAR1B/SPP1/SURF4/TMEM30A/ZC3H12A
## GO:0042063 ABCA2/ABL1/ADORA2A/APCDD1/ARHGEF10/B4GALT5/BMP2/BNIP3/BOK/CCL2/CCL3/CD9/CDH2/CDK5/CDK6/CDKN2B/CLCF1/CSF1/CSPG4/DLX2/DNER/DUSP15/ERBB2/ERCC2/FGF10/GAP43/GJC2/GLI3/GPR37L1/HDAC1/HEXB/IFNGR1/IL6/LAMB1/LIF/LRP8/MAP2K1/MBOAT7/MMP24/MTOR/MXRA8/MYOC/NAB1/NAB2/NCSTN/NKX6-1/NR1D1/PHGDH/PLEC/PRKCH/PRKCI/PSEN1/PTPN11/RHOA/SERPINE2/SH3TC2/SIRT2/SKI/SLC8A3/SOX4/SOX8/SOX9/SPINT1/SRGAP2/SUN1/TGFB2/TNFRSF1B/TNFRSF21/TSPAN2/VIM
## GO:0010508 BECN1/BNIP3/DHRSX/ENDOG/FOXO1/GPSM1/HIF1A/IKBKG/KDR/LRSAM1/NOD2/OPTN/PAFAH1B2/PARK7/PIK3CB/PIM2/PLEKHF1/PLK3/PRKAA2/PRKD1/RAB3GAP1/RIPK2/RNF152/ROCK1/SCOC/SESN2/SESN3/SLC25A5/SNX30/SPTLC2/STING1/TFEB/TP53INP2/TPCN1/TRIM5/TRIM8/VDAC1/WIPI1/ZC3H12A
## GO:0035966 ATXN3/AUP1/BAK1/BOK/CDK5RAP3/CREB3L2/DDIT3/DDRGK1/DERL1/DERL2/DNAJA1/DNAJC3/EDEM2/MMP24-AS1-EDEM2/EDEM3/EIF2S1/ERLEC1/ERO1A/ERP44/FICD/HSPA4/HSPA4L/HSPB1/HSPB2/HSPB7/HSPE1/JKAMP/MANF/MBTPS2/MFN2/OPTN/PPP1R15A/PTPN1/RNF126/SELENOS/STC2/STT3B/THBS4/TMEM33/TOR1A/UBE2W/UFD1/VAPB/VCP
## GO:0009165 ACLY/ACSBG2/ACSL3/ACSL4/ADORA2B/AK2/AK3/AK4/ALDOA/AMPD3/ASPDH/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/FLAD1/GUCY1A1/KARS1/KYNU/MTHFD2L/NADK2/NAMPT/NAXD/NME1/NMNAT3/NNMT/NOS2/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/PRPSAP1/PTGIS/RFK/SLC35B2/UCK2/UPP1/VCP
## GO:0010563 ABCA2/ABL1/ADARB1/ADORA2A/AGT/AJUBA/AKT1S1/ANGPT1/ANKLE2/ATG14/BAG4/BAK1/BDKRB1/BMP2/CD109/CDK5RAP1/CDK5RAP3/CDKN2B/CHP1/CTDSP2/CTDSPL/DBNDD2/DDIT4/DEPTOR/DNAJA1/DNAJC3/DUSP1/DUSP16/DUSP3/EPHB2/FKBP1A/GADD45B/GPD1L/GPRC5A/GRB10/GSTP1/HDAC4/HSPB1/HYAL2/INHA/INHBA/IPO5/IQGAP1/KIRREL1/LDLRAD4/LPCAT1/LPIN1/MGAT5/MICAL1/MLLT1/MSTN/MYADM/NIBAN1/PARD6A/PARK7/PDCD4/PDE4D/PID1/PIK3CB/PLEC/PMEPA1/PPM1E/PPP1R15A/PPP1R26/PPP2R5A/PPP4R2/PPP4R4/PRDX3/PRKAG2/PRKCD/PRKCZ/PRR5L/PSEN1/PTPN1/PTPN13/PTPRJ/RABGEF1/RGS2/ROCK1/ROCK2/RTRAF/SFRP1/SFRP2/SIRPA/SIRT2/SLC8A3/SNX25/SPAG9/STYXL1/SWAP70/TGFB2/TIGAR/TNFAIP3/TRIB3/VPS25/WARS1/YWHAG/ZC3H12A
## GO:0035296 ABL1/ADM/ADORA2A/ADORA2B/AGT/ATP1A2/CD38/DBH/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/EXT2/F2R/FOXC2/GCH1/GPER1/GRIP2/GUCY1A1/HRH1/ITGA1/KCNMA1/KCNMB2/KCNMB4/KLF2/MKKS/MTNR1B/NPR1/NPR3/OXTR/PER2/PLA2G6/PTGS2/RGS2/RHOA/ROCK1/ROCK2/SOD2/TBXA2R
## GO:0097746 ABL1/ADM/ADORA2A/ADORA2B/AGT/ATP1A2/CD38/DBH/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/EXT2/F2R/FOXC2/GCH1/GPER1/GRIP2/GUCY1A1/HRH1/ITGA1/KCNMA1/KCNMB2/KCNMB4/KLF2/MKKS/MTNR1B/NPR1/NPR3/OXTR/PER2/PLA2G6/PTGS2/RGS2/RHOA/ROCK1/ROCK2/SOD2/TBXA2R
## GO:0031668 ADORA2B/AIFM1/AKR1C3/AQP3/ATG14/ATG7/BECN1/CDKN2B/CYP24A1/DNAJC15/EIF2S1/FAM107A/FAS/FBXO22/FES/FOS/FOXO1/GABARAPL1/GABARAPL2/GAS6/GLRX2/IFI16/IL15/JMY/KIF26A/MAP1LC3C/MAP3K5/MFSD2A/MTOR/MYBBP1A/NR4A2/NUAK2/P2RX7/PCK1/PCSK9/PDK4/PLEC/PRKAA2/PRKAG2/PRKD1/RNF152/SESN2/SESN3/SFRP1/SFRP2/SIK1/SIK2/SLC2A1/SLC38A2/SLC39A4/SNW1/SRD5A1/TFEB/TLE5/TXN2/UCN2/UPP1/WDR45B/WIPI1/WNT2B/ZC3H12A
## GO:0010498 ANAPC4/ANKRD9/ARAF/AREL1/ATXN3/AUP1/BAG2/CSNK1D/CSNK1E/DDA1/DDIT3/DDRGK1/DERL1/DERL2/DMAC2/DNAAF4/ECRG4/EDEM2/MMP24-AS1-EDEM2/EDEM3/ERLEC1/FBXL16/FBXL18/FBXO22/FBXO33/FBXW5/FEM1B/GABARAPL2/HECW1/HM13/IFI27/JKAMP/LAMP3/LTN1/MAN1A1/NCCRP1/NHLRC3/NR1D1/OGT/OPHN1/OSBPL7/PARK7/PELI1/PIAS1/PKD1/PLK3/PPP2CB/PSEN1/PSMA1/PSMA2/PSMA3/PSMA4/PSMA5/PSMA6/PSMA7/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9/PSMC4/PSMC5/PSMD1/PSMD10/PSMD14/PSMD2/PSMD4/PSMD7/PSME1/PSME2/PSME3/RAD23A/RHBDF1/RNF121/RNF122/RNF126/RNF180/RNF19A/SEC61B/SELENOS/SH3RF2/SIAH1/SIAH2/SIRT2/SKP1/SMURF1/STT3B/TMEM259/TMTC3/TOR1A/TRIB3/UBE2H/UBE2W/UBE4B/UBQLN2/UBXN11/UBXN2B/UFD1/USP14/USP25/VCP/ZFAND2B/ZNRF1
## GO:2001234 ARHGEF2/ASAH2/BCL2L1/BCL2L2/BDNF/BID/BOK/CFLAR/COL2A1/CSF2/CSNK2A2/DNAJA1/ELL3/ENO1/EYA2/FAIM2/FGF10/GRINA/GSTP1/HDAC1/HIF1A/HSPB1/HYOU1/ICAM1/IFI6/IL7/ITGAV/ITPRIP/LMNA/MIF/NDUFA13/NOC2L/NOL3/NR4A2/PARK7/PF4/PIH1D1/PIK3CB/PPIF/PRDX2/PSEN1/PSMD10/PSME3/PTGS2/PTPN1/SCG2/SELENOS/SFRP2/SIAH2/SLC25A5/SOD2/TCF7L2/TGFBR1/TNFAIP3/VDAC2/VNN1/YAP1/ZNF385A
## GO:0061037 CCN4/CHADL/CTSK/EFEMP1/FRZB/PTPN11/RARA/RARB/RARG/RFLNA/ZNF664-RFLNA/SOX9/TGFBR1/WNT9A
## GO:0071548 AQP1/ATP5F1A/CFLAR/CLDN1/DDIT4/EDN1/EIF4E/FBXO32/FIBIN/GJB2/MSTN/NR3C1/PCK1/PCK2/PLAT/SERPINF1/SRD5A1
## GO:0006757 ADPGK/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TPI1
## GO:0043434 ADIPOR1/ADM/AGT/AGTRAP/AHCYL1/AP3S1/APPL1/APPL2/C2CD5/CA2/CAMK2A/CCND3/CFLAR/COL3A1/CREB1/EDN1/EDNRA/EDNRB/EEF2K/EGR1/EPRS1/FBN1/FOXC2/FOXO1/GAB1/GDF15/GJB2/GLP2R/GNAI1/GPER1/GRB10/HDAC5/INSIG2/IRS1/KHK/LEPROT/LEPROTL1/LPIN1/MAP1B/MSTN/MTOR/MYO1C/NFKB1/NKX6-1/NR4A2/NR4A3/OGT/OSBPL8/OXTR/PCK1/PCK2/PCSK9/PDE3B/PDK4/PID1/PIK3R3/PKM/PLAT/PRKCD/PRKCI/PRKCZ/PTGS2/PTPN1/PTPN11/PTPRE/RAB13/RANGAP1/ROCK1/ROCK2/SCAP/SELENOS/SESN2/SESN3/SIK2/SLC29A2/SLC2A1/SLC39A14/SRD5A1/STAT1/STAT4/STAT5B/STC2/TIMP4/TNS2/TRIB3/TRIM16/TSHR/VPS13C/YWHAG/ZFP36L1/ZNF106
## GO:0030595 AKIRIN1/C1QBP/C5/CAMK1D/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCN3/CCR7/CH25H/CMKLR1/CSF1/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/CYP7B1/DAPK2/DDT/DUSP1/EDN1/EDNRB/GAS6/HRH1/HSD3B7/IL16/IL23A/IL6/ITGA1/LBP/LGALS9/MIF/MSMP/MSTN/NINJ1/NOD2/PDE4B/PF4/PF4V1/PIK3CD/PLEC/SAA1/SCG2/SLC12A2/STK39/SWAP70/TGFB2/THBS4/TNFAIP6/TNFSF14/TREM1/WNT5A
## GO:0035150 ABL1/ADM/ADORA2A/ADORA2B/AGT/ATP1A2/CD38/DBH/DOCK4/DOCK5/EDN1/EDNRA/EDNRB/EXT2/F2R/FOXC2/GCH1/GPER1/GRIP2/GUCY1A1/HRH1/ITGA1/KCNMA1/KCNMB2/KCNMB4/KLF2/MKKS/MTNR1B/NPR1/NPR3/OXTR/PER2/PLA2G6/PTGS2/RGS2/RHOA/ROCK1/ROCK2/SOD2/TBXA2R
## GO:0090066 ABL1/ADD1/ADD3/ADM/ADORA2A/ADORA2B/AGT/AKT1S1/AQP1/ATP1A2/AVIL/BAG4/BDNF/BRK1/CAPG/CAPZA2/CAPZB/CCL11/CCR7/CD38/CDK5/CFL2/COTL1/CRABP2/CRACD/CREB1/CSF3/DBH/DEPTOR/DIP2B/DOCK4/DOCK5/DSTN/E2F4/EDN1/EDNRA/EDNRB/EXT2/F2R/FCHSD1/FCHSD2/FHOD3/FOXC2/GCH1/GPER1/GRIP2/GSN/GUCY1A1/HCK/HRH1/IL7R/ITGA1/KCNMA1/KCNMB2/KCNMB4/KCNN4/KIRREL1/KLF2/LAMTOR5/MAP1B/MAP3K13/MEGF8/MKKS/MTNR1B/MTOR/MYADM/NKX6-1/NPR1/NPR3/OXTR/P2RX7/PDXP/PER2/PLA2G6/PLXNA3/PLXNA4/PPP1R15A/PRKCD/PTGS2/RAB3B/RARG/RASA1/RGS2/RHOA/ROCK1/ROCK2/SCIN/SEMA3A/SEMA3B/SEMA3D/SEMA4A/SEMA5B/SLC12A2/SLC12A6/SNX9/SOD2/SPP1/SPTB/SPTBN5/SSH2/SSH3/SWAP70/TBXA2R/TMOD4/WAS/WNT5A
## GO:0048545 ABCA2/ABCA3/ABHD2/ADM/AIFM1/AKR1C3/AQP1/ATP1A1/ATP1A2/ATP1A3/ATP5F1A/BMP6/CALCOCO1/CD38/CFLAR/CLDN1/CNOT2/CYP7B1/DDIT4/DDRGK1/DDX17/DDX5/DNAAF4/EDN1/EIF4E/FAM107A/FBXO32/FIBIN/FKBP4/FOS/FOSB/GJB2/GPER1/GPI/HDAC1/IGFBP7/IL6/KLF9/LOX/MAOB/MBP/MSTN/NCOA4/NKX3-1/NR1D1/NR1H3/NR3C1/NR3C2/NR4A3/OXTR/PAPPA/PAQR8/PARK7/PCK1/PCK2/PHB1/PLAT/PMEPA1/PRMT2/PTGS2/PTPRU/RHOA/SAFB/SERPINF1/SFRP1/SPP1/SRD5A1/SST/SSTR5/STC1/TCF21/TFPI/TGFB2/TGFB3/YAP1/ZFP36/ZFP36L1
## GO:0046390 ACLY/ACSBG2/ACSL3/ACSL4/AK2/AK3/AK4/ALDOA/AMPD3/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/GUCY1A1/NME1/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/PRPSAP1/RFK/SLC35B2/UCK2/UPP1/VCP
## GO:0003015 ACTC1/ADM/ADM2/AGT/APLN/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/CACNA1C/CAMK2D/CORIN/DES/DMPK/EDN1/EDNRA/EDNRB/EPAS1/EXT2/FXYD1/FYN/GCH1/GJA1/GJD3/GLRX3/GPD1L/GSN/GSTM2/GSTO1/HSPB7/JUP/KCND3/KCNE4/KCNJ2/MAP2K3/MAP2K6/MEF2A/MTOR/PDE4B/PDE4D/PDE5A/RANGRF/RGS2/SCN2B/SCN4B/SEMA3A/SGCG/SLC8A3/SPX/STC1/TBX18/TGFB2/THRB/TNNC1/TNNI1/TNNT2/TPM1/YAP1/ZC3H12A
## GO:1901293 ACLY/ACSBG2/ACSL3/ACSL4/ADORA2B/AK2/AK3/AK4/ALDOA/AMPD3/ASPDH/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/FLAD1/GUCY1A1/KARS1/KYNU/MTHFD2L/NADK2/NAMPT/NAXD/NME1/NMNAT3/NNMT/NOS2/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/PRPSAP1/PTGIS/RFK/SLC35B2/UCK2/UPP1/VCP
## GO:0060047 ACTC1/ADM/ADM2/AGT/APLN/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/CACNA1C/CAMK2D/CORIN/DES/DMPK/EDN1/EDNRA/EDNRB/EPAS1/EXT2/FXYD1/GCH1/GJA1/GJD3/GLRX3/GPD1L/GSN/GSTM2/GSTO1/HSPB7/JUP/KCND3/KCNE4/KCNJ2/MAP2K3/MAP2K6/MEF2A/MTOR/PDE4B/PDE4D/PDE5A/RANGRF/RGS2/SCN2B/SCN4B/SEMA3A/SGCG/SLC8A3/SPX/STC1/TBX18/TGFB2/THRB/TNNC1/TNNI1/TNNT2/TPM1/ZC3H12A
## GO:0072503 ABL1/ABL2/ADCYAP1R1/ADM/AGT/AKAP6/ATP13A3/ATP1A2/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP7B/BAK1/BDKRB1/BNIP3/BOK/C1QTNF1/CACNA1C/CAMK2D/CAPN3/CCL11/CCL28/CCL3/CCL5/CCL7/CCL8/CCR7/CD38/CD55/CDK5/CHRNA7/CIB2/CMKLR1/CXCL10/DDIT3/DMPK/EDN1/EDNRA/EDNRB/ELANE/ERO1A/F2R/FKBP1A/FYN/GP1BB/GPER1/GRINA/GSTM2/GSTO1/HEXB/ITGAV/LETM1/LIME1/MCOLN1/MCOLN2/MT1E/MT1F/MT1G/MT1X/MT2A/MTNR1B/NOL3/OPRL1/OXTR/P2RX7/P2RY6/PDE4D/PDZD8/PIK3CB/PKD1/PLA2G6/PRKD1/PSEN1/PTGER4/PTGFR/PTH1R/RASA3/RMDN3/S1PR3/SAA1/SELENOK/SLC24A3/SLC25A23/SLC30A1/SLC30A4/SLC35G1/SLC39A10/SLC39A14/SLC39A4/SLC39A7/SLC39A8/SLC8A3/STC1/STC2/SWAP70/TBXA2R/TCIRG1/THADA/TMEM165/TMEM64/TPCN1/TRPM7/TSPOAP1/VAPB/WNT5A
## GO:0002062 BMP2/BMP6/BPNT2/CCN3/CCN4/CHADL/COL2A1/COL3A1/CREB3L2/CYTL1/EFEMP1/FGF18/FGF9/FGFR3/GLI3/MAF/MEF2C/PTH1R/PTPN11/RARB/RARG/RFLNA/ZNF664-RFLNA/SCIN/SFRP2/SLC39A14/SOX9/SULF2/TGFBI/TGFBR1/TSKU/WNT2B/WNT9A
## GO:0006457 ARL2/B2M/BAG1/BAG2/BAG4/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CRYAB/DNAJA1/DNAJB11/DNAJC1/DNAJC25/DNAJC3/DNAJC5/ERO1A/ERP44/FKBP11/FKBP1A/FKBP2/FKBP4/GRPEL1/HSPA4/HSPA4L/HSPB1/HSPB2/HSPB6/HSPE1/MESD/MKKS/NKTR/P4HB/PDCD5/PDIA3/PDIA4/PDIA5/PDRG1/PFDN2/PFDN6/PPIF/PPIL1/PPIL3/PPIL6/QSOX1/SDF2/SELENOF/SIL1/TBCA/TCP1/TOR1A/TXNDC9
## GO:0046916 ACO1/ANKRD9/ARF1/ATOX1/ATP6AP1/ATP6V0D1/ATP6V1G1/ATP7B/BMP6/BOLA2/CCDC115/CYB561A3/CYBRD1/FTH1/GLRX3/HIF1A/LCN2/MT1E/MT1F/MT1G/MT1X/MT2A/NCOA4/SCO2/SLC11A2/SLC30A1/SLC30A4/SLC39A10/SLC39A14/SLC39A4/SLC39A7/SLC39A8/STEAP4/TFRC
## GO:0030593 C1QBP/CAMK1D/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCR7/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/DAPK2/EDN1/IL23A/ITGA1/LBP/NOD2/PDE4B/PF4/PF4V1/PIK3CD/SAA1/TGFB2/THBS4/TNFAIP6/TREM1
## GO:0016055 ABL1/AMOTL1/AMOTL2/APCDD1/ATP6V0C/BAMBI/BCL9L/BMP2/CALCOCO1/CAPRIN2/CCN4/CCNE1/CDH2/CSNK1D/CSNK1E/CSNK2A2/CTR9/CXXC4/CYLD/DAAM1/DACT3/DDIT3/DIXDC1/DKK3/EDN1/EDNRA/EDNRB/EGR1/FERMT1/FGF10/FGF9/FGFR2/FOXL1/FOXO1/FRZB/G3BP1/GATA3/GLI3/GPC4/GRB10/GRK5/HDAC1/HECW1/IGFBP4/IGFBP6/JADE1/JRK/JUP/LGR4/LGR5/LZTS2/MCC/MESD/MKS1/MYOC/NDRG2/NFATC1/NFKB1/NR4A2/NXN/PKD1/PLEKHA4/PORCN/PRKAA2/PSEN1/PTPRU/RARG/RHOA/RSPO2/RSPO3/SDHAF2/SFRP1/SFRP2/SHISA2/SHISA6/SIAH2/SKI/SMURF1/SOX4/SOX9/SULF2/TBX18/TCF7L2/TLE1/TLE2/TLE5/TMEM237/TMEM64/TNFAIP3/TNKS/TRABD2B/TSKU/VCP/WIF1/WNT2B/WNT5A/WNT9A/YAP1/ZNF703
## GO:0097530 AKIRIN1/C1QBP/CAMK1D/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCR7/CMKLR1/CSF1/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/DAPK2/EDN1/HRH1/IL23A/IRAK4/ITGA1/JAGN1/LBP/MCOLN2/MSTN/NOD2/PDE4B/PF4/PF4V1/PIK3CD/PTGER4/SAA1/SCG2/TGFB2/THBS4/TNFAIP6/TREM1
## GO:2000116 ADORA2A/AIFM1/AQP1/ASPH/ATP2A3/BAK1/BID/BIRC3/BOK/CFLAR/COL4A3/CRYAB/CYCS/DHCR24/DLC1/EGLN3/F2R/F3/FADD/FAM162A/FAS/FYN/GAS6/GPER1/GPI/GSN/HSPE1/IFI16/IFI6/IGBP1/LAMP3/LAMTOR5/LAPTM5/LGALS9/MAP3K5/MICAL1/MTCH1/MUL1/NDUFA13/NKX3-1/NOL3/PARK7/PDCD5/PERP/PIH1D1/PRDX3/PSMB9/PTGS2/RHOA/RIPK2/SFRP2/SIAH2/TBC1D10A/TNFSF10/TNFSF14/UACA/VCP
## GO:0007517 ACTC1/ADARB1/AKIRIN1/BASP1/BMP2/CAPN3/CDK5/CFL2/CFLAR/CHODL/CITED2/COL3A1/COPRS/CREB1/CRYAB/CTF1/CXCL10/DDX17/DDX5/DES/DNER/EDNRA/EGR1/EPHB1/FBXO22/FGFR2/FHL1/FKBP1A/FKTN/FLOT1/FOS/FOXC2/FOXN2/FXR1/GJA1/HLF/ID3/ITGA11/KLF5/LAMA2/LIF/LOX/MAFF/MEF2A/MEF2C/MEGF10/MEOX2/MKX/MSTN/MYL6/MYL6B/MYORG/NIBAN2/PLEC/RBFOX1/RCAN1/RHOA/SGCA/SGCB/SGCG/SIRT2/SIX1/SIX4/SKI/SOX15/SOX8/SRPK3/TCF21/TGFB2/TGFBR1/TNNC1/TNNI1/TNNT2/TPM1/UQCC2/UTRN/WNT5A
## GO:0010950 ADRM1/AIFM1/ASPH/ATP2A3/BAK1/BID/BOK/CFLAR/COL4A3/CYCS/DLC1/EGLN3/F2R/F3/FADD/FAM162A/FAS/FYN/GPER1/GSN/HSPE1/IFI16/LAPTM5/LGALS9/MAP3K5/MBP/MTCH1/MUL1/NCSTN/NDUFA13/NKX3-1/PDCD5/PERP/PSMD14/PSME1/PSME2/PSME3/RHOA/RIPK2/ROCK2/SFRP2/TBC1D10A/TNFSF10/UACA/VCP/VSIR
## GO:0046513 ALOXE3/ASAH1/ASAH2/B3GALT1/B3GALT2/B4GALNT1/B4GALT4/B4GALT5/CERS6/DEGS2/ORMDL2/P2RX7/PLA2G6/PRKCD/SGMS2/SIRT3/SMPD2/SPTLC2/SPTSSA/SPTSSB/ST3GAL1/ST3GAL5/ST6GALNAC4
## GO:0006023 ABCC5/ANGPT1/B3GNT2/B3GNT7/B4GALT4/B4GALT5/B4GAT1/CHPF2/CHST12/CHST2/CHST5/CHST7/CSGALNACT1/DSE/DSEL/EXT2/GALNT5/GLCE/HAS3/HS3ST3A1/HS6ST1/NFKB1/ST3GAL1/ST3GAL4/UGDH/UST
## GO:0198738 ABL1/AMOTL1/AMOTL2/APCDD1/ATP6V0C/BAMBI/BCL9L/BMP2/CALCOCO1/CAPRIN2/CCN4/CCNE1/CDH2/CSNK1D/CSNK1E/CSNK2A2/CTR9/CXXC4/CYLD/DAAM1/DACT3/DDIT3/DIXDC1/DKK3/EDN1/EDNRA/EDNRB/EGR1/FERMT1/FGF10/FGF9/FGFR2/FOXL1/FOXO1/FRZB/G3BP1/GATA3/GLI3/GPC4/GRB10/GRK5/HDAC1/HECW1/IGFBP4/IGFBP6/JADE1/JRK/JUP/LGR4/LGR5/LZTS2/MCC/MESD/MKS1/MYOC/NDRG2/NFATC1/NFKB1/NR4A2/NXN/PKD1/PLEKHA4/PORCN/PRKAA2/PSEN1/PTPRU/RARG/RHOA/RSPO2/RSPO3/SDHAF2/SFRP1/SFRP2/SHISA2/SHISA6/SIAH2/SKI/SMURF1/SOX4/SOX9/SULF2/TBX18/TCF7L2/TLE1/TLE2/TLE5/TMEM237/TMEM64/TNFAIP3/TNKS/TRABD2B/TSKU/VCP/WIF1/WNT2B/WNT5A/WNT9A/YAP1/ZNF703
## GO:0010038 ACO1/ADD1/AHCYL1/AKR1C3/ALG2/ANK3/AQP1/AQP3/ATF1/ATP7B/B2M/BECN1/BMP6/BNIP3/CAMK2D/CAPN3/CHUK/CLDN1/CLIC4/CPNE5/CPOX/CREB1/CRIP1/CUTA/CYBRD1/EDN1/EEF2K/EIF2S1/ENDOG/FIBIN/FOS/FOSB/GPI/GSS/HIF1A/IQGAP1/KCNA1/KCNMA1/KCNMB2/KCNMB4/KHK/MAOB/MBP/MCOLN1/MEF2A/MEF2C/MT1E/MT1F/MT1G/MT1X/MT2A/NCSTN/NEK7/NPTX1/P2RX7/PARK7/PGAM2/PPIF/PPP2CB/PRKAA2/PTGS2/RASA4/RASA4B/SEC31A/SERPINF1/SLC11A2/SLC12A2/SLC25A23/SLC30A1/SLC30A4/SOD2/SORD/SYT17/TCIRG1/TFRC/TIGAR/TNFRSF11B/TNNC1/TNNT2/WNT5A
## GO:0009185 ADPGK/AK2/AK3/AK4/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/ENTPD7/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NUDT9/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TJP2/TPI1
## GO:0071216 ABCA1/ABL1/BMP6/CCL2/CCL3/CCL5/CD274/CD55/CEBPB/CHMP5/CSF2/CSF3/CTR9/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/DDIT3/EDNRB/EPHB2/FBH1/GSTP1/HCK/IL6/IRAK2/LBP/MAP2K3/MEF2C/MIF/NFKB1/NFKBIA/NFKBIB/NOD2/NOS2/NR1D1/NR1H3/PDCD1LG2/PDCD4/PDE4B/PF4/PF4V1/PRDX2/RARA/RHOA/RIPK2/SELENOS/SIRPA/SIRT2/SPON2/TBXA2R/TIGAR/TNFAIP3/TNFRSF1B/TNIP1/TRIM5/VIM/WNT5A/ZC3H12A/ZFP36
## GO:0006024 ABCC5/ANGPT1/B3GNT2/B3GNT7/B4GALT4/B4GAT1/CHPF2/CHST12/CHST2/CHST5/CHST7/CSGALNACT1/DSE/DSEL/EXT2/GALNT5/GLCE/HAS3/HS3ST3A1/HS6ST1/NFKB1/ST3GAL1/ST3GAL4/UGDH/UST
## GO:0071470 AKR1B1/AQP1/ARHGEF2/CAPN3/EFHD1/LETM1/LRRC8C/LRRC8D/PTGS2/RELB/SLC12A6/SLC25A23/SLC2A1/STK39/XRCC5/ZFP36L1
## GO:0050900 AKIRIN1/B4GALT1/BDKRB1/C1QBP/C5/CAMK1D/CCL11/CCL2/CCL20/CCL28/CCL3/CCL5/CCL7/CCL8/CCN3/CCR7/CD9/CH25H/CHST2/CMKLR1/CSF1/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/CYP7B1/DAPK2/DBH/DDT/DUSP1/EDN1/EDNRB/ELANE/FADD/FYN/GAS6/GATA3/HCK/HRH1/HSD3B7/ICAM1/IL16/IL23A/IL6/IRAK4/ITGA1/ITGB1/JAGN1/KITLG/LBP/LGALS9/MCOLN2/MIA3/MIF/MSMP/MSTN/NINJ1/NOD2/PDE4B/PF4/PF4V1/PIK3CD/PLEC/PTGER4/RABGEF1/RHOA/ROCK1/SAA1/SCG2/SELE/SELENOK/SIRPA/SLC12A2/ST3GAL4/STAT5B/STK39/SWAP70/TGFB2/THBS4/TNFAIP6/TNFSF14/TREM1/WNT5A
## GO:0009152 ACLY/ACSBG2/ACSL3/ACSL4/AK2/AK3/AK4/ALDOA/AMPD3/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/GUCY1A1/NME1/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/SLC35B2/VCP
## GO:0001655 ACVR2B/ADAMTS1/ADAMTS6/AGT/AHI1/AKR1B1/ANGPT1/AP1B1/BASP1/BMP2/BMP6/C1GALT1/CFLAR/COL4A1/COL4A3/COL4A4/CRIP1/CYP7B1/EDNRA/EDNRB/EGR1/EPHB2/FADD/FBN1/FEM1B/FGF10/FGFR2/FKBP4/FOXC2/FOXD1/FOXF1/FRAS1/GATA3/GCNT3/GFRA1/GLI3/GLIS2/HOXA13/HYAL2/ID3/IQGAP1/KIRREL3/LGR4/LGR5/LIF/LZTS2/MEF2C/MPV17/MTSS1/NKX3-1/PCSK5/PCSK9/PKD1/PODXL/RARA/RARB/RARG/RHOA/ROBO2/SERPINB7/SERPINF1/SFRP1/SIX1/SIX4/SOX4/SOX8/SOX9/SRD5A1/STAT1/SULF2/TBX18/TCF21/TGFB2/TGFBR1/TNS2/TRAF3IP2/TTC8/WNT2B/WNT5A/YAP1
## GO:1904062 ABL1/AGT/AHNAK/AKAP6/ANK3/ATP1A2/ATP1B1/ATP1B3/ATP2B4/ATPSCKMT/BDKRB1/C4orf3/CACNA1C/CACNB1/CACNG4/CAMK2D/CAPN3/CCL2/CDK5/CHP1/COX17/CTSS/CXCL10/EDN1/EDNRA/EPHB2/F2R/FGF11/FHL1/FKBP1A/FXYD1/FXYD5/FYN/GJC2/GLRX/GNB5/GPD1L/GPER1/GSTM2/GSTO1/HECW1/IFNGR2/ITGB1/KCNA1/KCNE4/KCNIP1/KCNJ2/KCNN4/LIME1/LRRC55/MEF2C/MINK1/MTNR1B/NDUFA4/NLGN2/NLGN3/OPRL1/P2RY6/PARK7/PCSK9/PDE4B/PDE4D/PDZK1/PLA2G6/PPIF/PRKD1/RANGRF/RGS2/SCN2B/SCN4B/SHISA6/SLC30A1/SLC43A2/STIMATE/STK39/TCIRG1/THADA/UTRN/VDAC1/VMP1
## GO:0009612 ABHD12/AGT/AQP1/ATP1A2/BAK1/BDKRB1/BMP6/BNIP3/CDH2/CITED2/CXCL10/EDN1/ENDOG/FADD/FAS/FOS/FOSB/FYN/GPI/GSN/HABP4/IRF1/JUP/KCNA1/KCNJ2/MAP1B/MAP3K14/MEIS2/MKKS/NFKB1/NFKBIA/NRXN2/P2RX7/PDZD7/PHF24/PKD1/PLEC/PPL/PTGER4/PTGS2/RHOA/SERPINE2/SLC2A1/SLC38A2/SOX9/STAT1/STRC/TMEM150C/TNFRSF10B/TNFRSF8/TNFSF14
## GO:0030099 ATP5IF1/ATP6AP1/B2M/BATF/CCL3/CCN4/CCR7/CD109/CDIN1/CDK5RAP3/CDK6/CDKN2B/CEBPB/CEBPG/CITED2/CREB1/CSF1/CSF2/CSF3/CTR9/EPAS1/ERCC2/FADD/FAXDC2/FBN1/FES/FLI1/FOS/FSTL3/GATA3/GLO1/GPR137/H4C12/H4C15/HIF1A/HOXA9/IFI16/IL11/IL15/IL23A/INHA/INHBA/ISG15/JAGN1/KITLG/KLF13/KLF2/L3MBTL1/LIF/LOX/MEF2C/MEIS2/MPIG6B/MT1G/MTOR/NBEAL2/NFKBIA/OSTM1/PABPC4/PF4/PIAS3/PIK3CD/PRDX3/PRMT1/PSEN1/PTPN11/RAB7B/RARA/RARG/RELB/SCIN/SFRP1/SFXN1/SLC11A2/SLC25A5/STAT1/STAT5B/TCIRG1/TFRC/TMEM64/TNFAIP6/TSPAN2/WASF2/ZBTB46/ZFP36/ZFP36L1/ZNF385A
## GO:0032526 ABCA1/ABL2/AQP1/AQP3/ATM/BMP6/BRINP2/CD38/CREB1/FGFR2/GJB2/HOXA2/HSD17B2/IGF2R/IGFBP7/LTK/NDUFA13/PCK1/RARA/RARG/RORB/SERPINF1/SLC10A3/SNW1/SOX9/TEAD2/TFRC/TRIM16/WNT5A/WNT9A/YAP1/ZNF35
## GO:0098657 ACSL3/AGT/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP1B3/ATP2B4/CACNA1C/CYBRD1/EPRS1/FABP3/FLOT1/FYN/IL10RA/ITGB1/KCNJ2/LRRC8C/LRSAM1/MAPK15/PARK7/PER2/PLPPR4/PSEN1/RAB3B/RGS2/SCNN1A/SCNN1D/SLC11A2/SLC12A2/SLC12A6/SLC15A3/SLC15A4/SLC16A2/SLC19A1/SLC1A4/SLC1A5/SLC29A1/SLC29A2/SLC2A1/SLC2A3/SLC30A1/SLC36A4/SLC38A1/SLC39A10/SLC39A14/SLC39A4/SLC39A8/SLC43A2/SLC6A6/SLC7A2/SLC7A8/SLC8A3/SLC9A3/SLC9A9/SPX/STEAP4/TOR1A
## GO:0006164 ACLY/ACSBG2/ACSL3/ACSL4/ADORA2B/AK2/AK3/AK4/ALDOA/AMPD3/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/GUCY1A1/MTHFD2L/NME1/NOS2/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/PRPSAP1/SLC35B2/VCP
## GO:0010952 ADRM1/AIFM1/ANTXR1/ASPH/ATP2A3/BAK1/BID/BOK/CFLAR/COL4A3/CYCS/DDRGK1/DLC1/EGLN3/F2R/F3/FADD/FAM162A/FAS/FYN/GPER1/GSN/HSPE1/IFI16/LAPTM5/LGALS9/MAP3K5/MBP/MTCH1/MUL1/NCSTN/NDUFA13/NKX3-1/PCOLCE/PDCD5/PERP/PSMD14/PSME1/PSME2/PSME3/RHOA/RIPK2/ROCK2/SFRP2/TBC1D10A/TNFSF10/UACA/VCP/VSIR
## GO:0060485 ACTC1/ADIPOR1/AKNA/BAMBI/BASP1/BCL9L/BMP2/CDH2/CITED2/CLASP2/DACT3/DDX17/DDX5/EDN1/EDNRA/EDNRB/ELL3/EPB41L5/FGF10/FGF9/FGFR2/FOXC2/FOXD1/FOXF1/FRZB/GATA3/GLIPR2/HIF1A/HNRNPAB/IL17RD/IL6/KITLG/LDLRAD4/LOXL3/MEF2C/MTOR/NOLC1/NRP2/NRTN/PDCD4/POGLUT1/ROBO2/ROCK1/ROCK2/SDHAF2/SEMA3A/SEMA3B/SEMA3D/SEMA4A/SEMA5B/SFRP1/SFRP2/SIX1/SIX4/SOX8/SOX9/STAT1/TASOR/TCF21/TCF7L2/TEAD2/TGFB2/TGFB3/TGFBR1/TMEM100/WNT5A/YAP1/ZFP36L1/ZFP64/ZNF703
## GO:0001836 BAK1/BCL2L1/BCL2L2/BID/BMF/BNIP3/BOK/FAM162A/GPER1/IFI6/LMNA/MFF/MLLT11/NOL3/PDCD5/PLA2G6/PPIF/PSMD10/SOD2/TNFSF10
## GO:0050878 ADM/ADORA2A/AK3/AKR1B1/ALOXE3/APLN/AQP1/AQP3/ATP7B/C1GALT1C1/C1QTNF1/CD9/CLDN1/COL3A1/CORO2B/CREB1/CSRP1/DDR1/DGKA/DGKD/DGKH/EDN1/EDNRB/EMP2/EPHB2/EXT2/F13A1/F2R/F3/F5/FGF10/FLI1/FUNDC2/GAS6/GJA1/GP1BB/GPI/HIF1A/HK2/HPS4/HPS5/HSPB1/HYAL2/IL6/ITPK1/KCNN4/KRT16/MPIG6B/MYO5B/NME1/NPR1/NPR3/NR1H2/NR1H3/OPRL1/OXTR/PABPC4/PAPSS2/PF4/PF4V1/PIK3CB/PLA2G4A/PLAT/PLEC/PRDX2/PRKCD/PRL/PROS1/RAB27A/RAP2B/SAA1/SCNN1A/SERPINE2/SLC29A1/SLC29A2/ST3GAL4/STAT5B/STK39/TBXA2R/TFPI/TFPI2/THBD/TRAF3IP2/WAS/ZNF385A
## GO:0048705 ACVR2B/BMP1/BMP6/BPNT2/CHAD/CITED2/COL2A1/COL3A1/CSGALNACT1/CSRNP1/DLX2/EXT2/FBN2/FGF18/FGFR2/FGFR3/FOXC2/FOXN3/GLI3/HOXA2/HOXA3/HOXA6/HOXA9/HOXC4/HYAL2/INSIG2/MEF2C/MEGF8/NAB1/NAB2/P2RX7/PKD1/PLEKHA1/PSEN1/RAB23/RAB33B/RARA/RARB/RARG/RFLNA/ZNF664-RFLNA/SFRP1/SFRP2/SIX1/SIX4/SKI/SOX9/STC1/TBX4/TGFB3/TGFBR1/THBS3/TMEM119/TSKU/TULP3/ZEB1
## GO:0072001 ACVR2B/ADAMTS1/ADAMTS6/AGT/AHI1/AKR1B1/ANGPT1/AP1B1/BASP1/BMP2/BMP6/C1GALT1/CFLAR/COL4A1/COL4A3/COL4A4/EDNRA/EDNRB/EGR1/FADD/FBN1/FGF10/FGFR2/FOXC2/FOXD1/FOXF1/FRAS1/GATA3/GCNT3/GFRA1/GLI3/GLIS2/HYAL2/ID3/IQGAP1/KIRREL3/LGR4/LGR5/LIF/LZTS2/MEF2C/MPV17/MTSS1/NKX3-1/PCSK5/PCSK9/PKD1/PODXL/RARA/RARB/RHOA/ROBO2/SERPINB7/SERPINF1/SFRP1/SIX1/SIX4/SOX4/SOX8/SOX9/STAT1/SULF2/TBX18/TCF21/TGFB2/TGFBR1/TNS2/TRAF3IP2/TTC8/WNT2B/WNT5A/YAP1
## GO:0032527 AUP1/DERL1/DERL2/EDEM2/MMP24-AS1-EDEM2/ERLEC1/HM13/MAP1LC3C/RANGRF/SAR1B/SEC16B/CRYZL2P-SEC16B/SEC61B/SELENOS/TMEM30A/TMEM30B/UFD1/VCP
## GO:0034764 ABL1/AGT/AKAP6/ANK3/APPL1/ATP1B1/ATP1B3/ATPSCKMT/AZIN1/BDKRB1/C2CD5/C3/CA2/CACNG4/CAPN3/CCL2/CDK5/CHP1/COX17/CREBL2/CTSS/CXCL10/EDN1/EDNRA/EPHB2/F2R/FXYD1/GJC2/GLRX/GPER1/GSTM2/GSTO1/IFNGR2/IRS1/ITGB1/KCNA1/KCNJ2/KCNN4/LRRC55/MEF2A/NDUFA4/NLGN3/NR4A3/OSBPL8/P2RX7/P2RY6/PDZK1/PRKCI/PSEN1/PTPN11/STIMATE/STK39/VMP1
## GO:0048762 ADIPOR1/AKNA/BAMBI/BCL9L/BMP2/CDH2/CITED2/CLASP2/DACT3/DDX17/DDX5/EDN1/EDNRA/EDNRB/ELL3/EPB41L5/FGF10/FGFR2/FOXC2/FRZB/GATA3/GLIPR2/HIF1A/HNRNPAB/IL17RD/IL6/KITLG/LDLRAD4/LOXL3/MEF2C/MTOR/NOLC1/NRP2/NRTN/PDCD4/ROCK1/ROCK2/SDHAF2/SEMA3A/SEMA3B/SEMA3D/SEMA4A/SEMA5B/SFRP1/SFRP2/SIX1/SOX8/SOX9/STAT1/TASOR/TCF21/TCF7L2/TGFB2/TGFB3/TGFBR1/TMEM100/WNT5A/ZFP64/ZNF703
## GO:0006066 ABCA1/ABCA2/ACER3/ACLY/ACO2/ADCYAP1R1/AKR1B1/AKR1C1/AKR1C2/AKR1C3/ALDH1B1/ALDH2/APOL2/ASAH1/ASAH2/ASAH2B/BMP2/BMP6/BPNT2/CH25H/COQ2/CYP27C1/CYP7B1/DBH/DEGS2/DHCR24/DHCR7/DHRS13/DKK3/DPAGT1/EDNRB/FMO5/GCH1/GDE1/GK/GPD2/GPER1/HRH1/IDH3A/INSIG2/IP6K1/IPMK/IPPK/ISYNA1/ITPK1/LPCAT3/LSS/MBTPS2/MINPP1/NAAA/NFKB1/NUDT4/NUS1/OCRL/P2RY6/PARK7/PCK1/PCK2/PCSK9/PLA2G4A/PMVK/PPIP5K2/PRKAA2/PTH1R/PTS/QDPR/RDH11/RDH5/SCAP/SEC14L2/SOAT2/SORD/SPTLC2/SPTSSA/SPTSSB/SQLE/SULT1C4/TKFC/TPI1/TSKU/VLDLR
## GO:0007033 ABCA1/ACP2/AKTIP/ATG14/ATG3/ATG7/ATP2A2/BECN1/CCDC115/CHMP4B/EMC6/FHIP1B/GABARAPL1/GABARAPL2/GNPTAB/HEXB/HOOK2/HPS4/LAMTOR1/LAPTM5/LRSAM1/MAP1LC3C/MFN2/MTOR/P2RX7/PHF23/PPT1/PSEN1/RAB23/RAB33B/RAB3GAP1/RAB7B/SCARB2/SEC22B/SMURF1/SNX30/STING1/TBC1D12/TCIRG1/TFEB/TMEM165/TMEM175/TP53INP2/UBQLN2/UBXN2B/VMP1/WDR45B/WIPI1
## GO:0010232 ABCA2/ABCC5/ATP1A2/ATP2A3/ATP2B4/ATP8A1/MFSD2A/SLC12A2/SLC16A2/SLC19A1/SLC1A4/SLC1A5/SLC24A3/SLC29A1/SLC29A2/SLC2A1/SLC2A13/SLC2A3/SLC38A1/SLC38A2/SLC44A1/SLC6A6/SLC7A2/SLC7A8/SLCO2B1/SLCO3A1/TFRC
## GO:0150104 ABCA2/ABCC5/ATP1A2/ATP2A3/ATP2B4/ATP8A1/MFSD2A/SLC12A2/SLC16A2/SLC19A1/SLC1A4/SLC1A5/SLC24A3/SLC29A1/SLC29A2/SLC2A1/SLC2A13/SLC2A3/SLC38A1/SLC38A2/SLC44A1/SLC6A6/SLC7A2/SLC7A8/SLCO2B1/SLCO3A1/TFRC
## GO:0090257 ADORA2B/AGT/AKAP6/ATP1A1/ATP1A2/ATP1B1/ATP2A2/ATP2B4/BECN1/CACNA1C/CAMK2D/DMPK/DOCK4/DOCK5/EDN1/ENO1/F2R/FBXO32/FOXO1/GLRX3/GPER1/GSTM2/GSTO1/GUCY1A1/HDAC4/JUP/KCNA1/KCNJ2/KCNMA1/LMCD1/LMNA/MEF2A/MSTN/MYL5/NOL3/NR4A3/OXTR/PDE4B/PDE4D/PDE5A/PPP1R12B/PTGS2/RANGRF/RGS2/RHOA/ROCK1/ROCK2/SGCA/SLC8A3/SPX/STC1/TBXA2R/TNFRSF1B/TNNC1/TNNC2/TNNI1/TNNT2/TNNT3/TPM1/ZC3H12A
## GO:1904851 CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/TCP1
## GO:0006986 BAK1/BOK/CDK5RAP3/CREB3L2/DDIT3/DDRGK1/DERL1/DERL2/DNAJA1/DNAJC3/EDEM2/MMP24-AS1-EDEM2/EDEM3/EIF2S1/ERLEC1/ERO1A/ERP44/FICD/HSPA4/HSPA4L/HSPB1/HSPB2/HSPB7/HSPE1/JKAMP/MANF/MBTPS2/MFN2/OPTN/PPP1R15A/PTPN1/SELENOS/STC2/STT3B/THBS4/TMEM33/VAPB/VCP
## GO:0046661 AKR1C3/BCL2L1/BCL2L2/BMP6/BOK/CITED2/COL9A3/DHCR24/DHX37/FGF10/FGF9/FKBP4/FNDC3A/GATA3/GFRA1/GJA1/HOXA13/INHA/INHBA/KITLG/LGR4/MAMLD1/NCOA4/NKX3-1/PLEKHA1/RAB13/RARA/RNF38/SEMA3A/SFRP1/SFRP2/SIX4/SOX15/SOX8/SOX9/SRD5A1/STAT5B/TCF21/TFPT/TGFB2/TGFBR1/WNT2B/WNT5A
## GO:0042776 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT
## GO:0006487 ALG2/ALG3/ALG5/ALG8/ALG9/B4GALT1/DOLK/DPAGT1/EXT2/GFPT2/MAN1C1/MGAT1/MGAT4A/MGAT5/MLEC/NUS1/OSTC/RPN1/RPN2/SLC39A8/ST3GAL1/STT3B/TMEM165
## GO:0071260 AGT/AQP1/ATP1A2/BAK1/BMP6/BNIP3/FADD/FAS/HABP4/IRF1/KCNJ2/MAP3K14/NFKB1/PLEC/PTGER4/PTGS2/SLC2A1/SLC38A2/SOX9/TMEM150C/TNFRSF10B/TNFRSF8/TNFSF14
## GO:0010876 ABCA1/ABCA2/ABCA3/ABCD4/ABHD5/ACSL3/AGT/AKR1C1/ANO9/APOL2/APOO/ATP10A/ATP8A1/ATP8B1/ATP8B4/ATP9A/AUP1/B4GALNT1/BMP6/C1QTNF1/C2CD2L/C3/CERT1/CRABP2/DENND5B/EDN1/EHD1/EPRS1/ESYT1/FABP3/FITM2/FURIN/HEXB/HILPDA/IL6/INHBA/ITGAV/KCNN4/LBP/LIPG/LPCAT3/LRP10/MAP2K6/MEST/MFSD2A/MIF/NFKB1/NFKBIA/NKX3-1/NOS2/NR1H2/NR1H3/NUS1/OSBPL3/OSBPL7/OSBPL8/OSBPL9/P2RX7/PCSK9/PDZD8/PITPNC1/PITPNM1/PLA2G4A/PLA2G6/PLA2R1/PLPPR4/PNPLA8/PRELID3A/PRKCD/PROCA1/PTGES/PTPN11/RBP7/SAR1B/SCARB2/SELENOM/SLC10A3/SLC27A3/SLC2A1/SLCO1A2/SLCO2B1/SLCO3A1/SOAT2/SPP1/SPX/SQLE/STARD5/STAT5B/SURF4/TMEM30A/TMEM30B/TTPA/VLDLR/VMP1/VPS51/ZC3H12A
## GO:0006970 AKR1B1/AQP1/ARHGEF2/CAPN3/CLDN1/EFHD1/ICOSLG/KCNMA1/LETM1/LRRC8C/LRRC8D/NOLC1/PLK3/PTGS2/RELB/SLC12A2/SLC12A6/SLC25A23/SLC2A1/SORD/SST/STK39/TSC22D3/XRCC5/ZFP36L1
## GO:0044106 ALDH2/AMD1/AOC2/ATP2B4/AZIN1/BHMT/DBH/DMGDH/EDNRA/EPAS1/GATA3/GCH1/GDE1/HDAC10/HNMT/IL4I1/KYNU/MAOA/MAOB/NAAA/NNMT/NPR1/NR4A2/OAZ1/OAZ2/PARK7/RNF180/SAT1/SLC44A1/SLC7A7/SMOX/SRM/TGFB2
## GO:0006972 AKR1B1/AQP1/ARHGEF2/CLDN1/EFHD1/ICOSLG/LETM1/SLC12A2/SLC25A23/SLC2A1/SST/XRCC5
## GO:0034349 AKAP12/CCL2/CDK5/GAS6/PRKCD/PRKCH/PRKCI/TNFRSF21/TRAF2
## GO:0071474 AKR1B1/AQP1/ARHGEF2/EFHD1/LETM1/SLC25A23/SLC2A1/XRCC5
## GO:0009267 AKR1C3/ATG14/ATG7/BECN1/DNAJC15/EIF2S1/FAS/FBXO22/FOXO1/GABARAPL1/GABARAPL2/GAS6/IFI16/JMY/MAP1LC3C/MAP3K5/MFSD2A/MTOR/MYBBP1A/NUAK2/PCK1/PCSK9/PDK4/PRKAA2/PRKAG2/PRKD1/RNF152/SESN2/SESN3/SFRP1/SIK1/SIK2/SLC2A1/SLC38A2/SLC39A4/SRD5A1/TFEB/UPP1/WDR45B/WIPI1/WNT2B/ZC3H12A
## GO:0019221 ADIPOR1/ANGPT1/APPL1/APPL2/BIRC3/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCR7/CHUK/CLCF1/CMKLR1/CSF1/CSF2/CSF3/CTR9/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/CYLD/EDN1/EGR1/EIF5A/F3/FADD/FAS/GAS6/GSTP1/HCK/HIF1A/IFI27/IFNAR1/IFNAR2/IFNGR1/IFNGR2/IFNLR1/IL10RA/IL10RB/IL11RA/IL15/IL15RA/IL17RD/IL17RE/IL33/IL3RA/IL6/IL7/IL7R/IRAK2/IRAK4/IRF1/ISG15/JAGN1/LAPTM5/LRP8/MKKS/MMP12/MUL1/NFKBIA/NKIRAS2/NOL3/NR1H2/NR1H3/NUMBL/OAS1/OASL/OSMR/P4HB/PF4/PF4V1/PIAS3/PLP2/PPP2CB/PTPN1/PTPN11/PTPRJ/PXDN/RABGEF1/RIPK2/STAT1/STAT4/STAT5B/STING1/STK39/TNFAIP3/TNFRSF1B/TRAF2/TRAF3/TRAF3IP2/TXNDC17/USP18/USP27X/WBP1L/WNT5A/YAP1
## GO:0009308 ALDH2/AMD1/AOC2/AOC3/ATP2B4/AZIN1/BHMT/DBH/DMGDH/EDNRA/EPAS1/GATA3/GCH1/GDE1/HDAC10/HNMT/IL4I1/KYNU/MAOA/MAOB/NAAA/NNMT/NPR1/NR4A2/OAZ1/OAZ2/PARK7/RNF180/SAT1/SLC44A1/SLC7A7/SMOX/SRM/TGFB2
## GO:0009615 ADARB1/ARF1/ATAD3A/ATG7/AUP1/BCL2L1/BCL3/BECN1/BIRC3/BNIP3/BST2/C1QBP/CCL11/CCL5/CCL8/CCT5/CDK6/CHUK/CXCL10/DCLK1/DDIT4/DDX17/DNAJC3/EIF5A/ENO1/EXOC1/EXOSC4/FADD/G3BP1/GATA3/GBP1/GPATCH3/HIF1A/HSPB1/HYAL2/IFI16/IFI27/IFI44L/IFI6/IFIT5/IFNAR1/IFNAR2/IFNGR1/IFNGR2/IFNLR1/IKBKG/IL10RB/IL15/IL23A/IL6/IRF1/IRF2/ISG15/LAMTOR5/LGALS9/MAP3K14/MAPK11/MMP12/MOV10/MUL1/NDUFAF4/NFKB1/OAS1/OASL/PHB1/PIM2/POLR3K/POU2F2/PSMA2/RTP4/SELENOK/SENP7/SERINC5/SPON2/STAT1/STING1/TKFC/TNFAIP3/TRAF3/TRAF3IP2/TRIM5/TRIM8/UFD1/UNC13D/USP27X/ZC3H12A
## GO:0034599 ABL1/AIFM1/AIFM2/AKR1C3/AQP1/ATP2A2/BECN1/BNIP3/BRF2/CHCHD2/CHUK/EDN1/EDNRA/EIF2S1/ENDOG/EPAS1/FOS/FOXO1/FYN/GCH1/GJB2/GLRX2/GPR37L1/GSR/HIF1A/HSPB1/IL6/KLF2/MAP3K5/MAPKAP1/MGST1/MMP3/MPV17/NCOA7/NOL3/NR4A2/NR4A3/P4HB/PARK7/PDK1/PLA2R1/PLEKHA1/PNPLA8/PPIF/PRDX1/PRDX2/PRDX3/PRKAA2/PRKCD/PRKD1/PRODH/PRR5L/PTPRK/PYCR1/PYCR2/ROMO1/SELENOS/SESN2/SIRPA/SIRT2/SOD2/TNFAIP3/TPM1/TXN/VNN1/ZC3H12A
## GO:0008016 ADM/ADM2/AGT/APLN/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/CACNA1C/CAMK2D/CORIN/DES/DMPK/EDN1/EDNRA/EDNRB/EPAS1/FXYD1/GCH1/GJA1/GJD3/GLRX3/GPD1L/GSTM2/GSTO1/HSPB7/JUP/KCND3/KCNE4/KCNJ2/MEF2A/PDE4B/PDE4D/PDE5A/RANGRF/RGS2/SCN2B/SCN4B/SEMA3A/SLC8A3/SPX/STC1/TBX18/TGFB2/THRB/TNNT2/TPM1/ZC3H12A
## GO:0008654 ABCA2/ABHD4/ABHD5/ACSL3/AGPAT3/AGPAT4/AJUBA/ATG14/ATM/BECN1/BPNT2/CHP1/CHPT1/DGKA/DGKD/DGKH/DOLK/ETNK2/FABP3/FAR1/FITM2/HDHD5/HEXB/FAM126A/IP6K1/IPMK/ISYNA1/LPCAT1/LPCAT3/LPCAT4/LPIN1/MBOAT1/MBOAT7/MFSD2A/NUS1/OCRL/PGAP2/PI4K2A/PI4KA/PIGL/PIGO/PIGS/PIGU/PIGV/PIK3CB/PIK3CD/PIK3R3/PITPNM1/PLA2G4A/PLA2G6/PLD1/PLD2/PMVK/PTPMT1/SELENOI/SERINC5/SGMS2/SLC44A1/SLC44A3/SMG1/SPTLC2
## GO:0042326 ABL1/ADARB1/ADORA2A/AGT/AJUBA/AKT1S1/ANGPT1/ANKLE2/ATG14/BAK1/BDKRB1/BMP2/CD109/CDK5RAP1/CDK5RAP3/CDKN2B/CHP1/CTDSP2/CTDSPL/DBNDD2/DDIT4/DEPTOR/DNAJA1/DNAJC3/DUSP1/DUSP16/DUSP3/EPHB2/GADD45B/GPD1L/GPRC5A/GRB10/GSTP1/HDAC4/HSPB1/HYAL2/INHA/INHBA/IPO5/KIRREL1/LDLRAD4/MICAL1/MLLT1/MSTN/MYADM/NIBAN1/PARD6A/PARK7/PDCD4/PDE4D/PID1/PIK3CB/PLEC/PMEPA1/PPM1E/PPP2R5A/PPP4R2/PRDX3/PRKAG2/PRKCD/PRKCZ/PRR5L/PSEN1/PTPN1/PTPN13/PTPRJ/RABGEF1/RGS2/ROCK1/RTRAF/SFRP1/SFRP2/SIRPA/SIRT2/SLC8A3/SNX25/SPAG9/TIGAR/TNFAIP3/TRIB3/VPS25/WARS1/YWHAG/ZC3H12A
## GO:0060349 BMP6/BPNT2/CITED2/COL2A1/COL3A1/CSGALNACT1/EXT2/FGF18/FGFR2/FGFR3/FOXN3/GLI3/INSIG2/MEF2C/MEGF8/NAB1/NAB2/RAB23/RARA/RARB/RARG/SFRP2/SKI/SOX9/STC1/TGFB3/THBS3/TMEM119/TSKU
## GO:0070555 AKAP12/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CD38/CEBPB/CXCL8/EDN1/EGR1/GBP1/HDAC4/HIF1A/HYAL2/IGBP1/IL6/IRAK2/IRAK4/KLF2/LGALS9/MAPK11/NFKB1/NKX3-1/NR1D1/PCK1/PRKCI/PTGIS/RIPK2/RORA/SELE/SFRP1/SIRPA/SOX9/TLE5/ZC3H12A
## GO:0106106 ABHD6/ACOT11/ACVR2B/ADIPOR1/APPL2/ARRDC3/CEBPB/CMKLR1/DBH/DDIT3/DECR1/ELOVL3/EPAS1/FOXC2/G0S2/GJA1/GRB10/IL15/IP6K1/KSR2/LAMA4/LCN2/LGR4/LPIN1/MAP2K6/MFN2/NPR3/NR1D1/NR1H2/NR1H3/OGT/OXTR/PER2/PLAC8/PLCL1/PRDM16/SCD/TSHR/ZNF423
## GO:0120161 ABHD6/ACOT11/ACVR2B/ADIPOR1/APPL2/ARRDC3/CEBPB/CMKLR1/DBH/DDIT3/DECR1/ELOVL3/EPAS1/FOXC2/G0S2/GJA1/GRB10/IL15/IP6K1/KSR2/LAMA4/LCN2/LGR4/LPIN1/MAP2K6/MFN2/NPR3/NR1D1/NR1H2/NR1H3/OGT/OXTR/PER2/PLAC8/PLCL1/PRDM16/SCD/TSHR/ZNF423
## GO:0006734 ENO1/ENO2/GPD2/HK2/MDH1/MDH1B/MDH2/NUDT17/PCK2/PFKL/PFKP/TIGAR/VCP
## GO:0051099 ABL1/ADD1/AKTIP/B2M/BAMBI/BDNF/BMP2/CAPRIN2/CDK5/CEBPG/CSF3/DDRGK1/DERL1/EDF1/EIF2S1/EPB41/EPB41L5/ERCC2/FKBP1A/FLOT1/GATA3/GPSM1/LAMTOR5/LFNG/MFNG/NIBAN2/NME1/PARK7/PKD1/PLCL1/PPP2CB/PSEN1/RARA/RFNG/RIPK2/SIRT2/SKI/SPAG8/SPON1/STING1/TCF7L2/TRIB3/TXN/WNT5A
## GO:0032331 CCN4/CHADL/EFEMP1/PTPN11/RARB/RARG/RFLNA/ZNF664-RFLNA/SOX9/TGFBR1/WNT9A
## GO:0034312 ABCA2/ACER3/ASAH1/ASAH2/ASAH2B/GCH1/PTS/QDPR/SPTLC2/SPTSSA/SPTSSB
## GO:0043122 ABL1/AJUBA/ANGPT1/BIRC3/BST2/CAPN3/CCR7/CFLAR/CHUK/F2R/FADD/FKBP1A/FYN/GAPDH/GJA1/GSTP1/HDAC1/HSPB1/IFIT5/IKBKG/IRAK4/LAMTOR5/LGALS9/LIME1/LURAP1L/MAP3K14/MAP3K3/MUL1/NFKBIB/NKIRAS2/NOD2/NR1D1/OPTN/PELI1/PIM2/PRKD1/RHOA/RIPK2/RORA/SHISA5/SLC35B2/STAT1/TAB2/TFG/TFRC/TIFA/TLE1/TNFAIP3/TNFRSF10B/TNFSF10/TNIP1/TRAF2/TRAF3/TRAF3IP2/TRIM5/TRIM8/UBE2N/UNC5CL/WNT5A/ZC3H12A
## GO:0072522 ACLY/ACSBG2/ACSL3/ACSL4/ADORA2B/AK2/AK3/AK4/ALDOA/AMD1/AMPD3/ATIC/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/DCAKD/DIP2A/DLAT/ELOVL2/ELOVL3/ENO1/GUCY1A1/MTHFD2L/NME1/NOS2/NPR1/PAICS/PAPSS1/PAPSS2/PDHB/PDHX/PDK1/PDK4/PID1/PPT1/PPT2/PRKAG2/PRPSAP1/SLC35B2/VCP
## GO:1905954 ABCA3/ATP8A1/BMP6/C1QTNF1/C3/DENND5B/EDN1/EHD1/FABP3/FITM2/HILPDA/LIPG/LPCAT3/MAP2K6/MIF/NFKB1/NKX3-1/NR1H2/NR1H3/P2RX7/PLA2G4A/PLA2G6/PLA2R1/PRKCD/PTGES/SPP1/TMEM30A/ZC3H12A
## GO:0071300 ABCA1/ABL2/AQP1/ATM/BRINP2/CREB1/FGFR2/HOXA2/LTK/NDUFA13/PCK1/RARA/RARG/RORB/SERPINF1/SNW1/SOX9/TEAD2/WNT5A/WNT9A/YAP1/ZNF35
## GO:0034612 AFF3/AKAP12/ARHGEF2/ASAH1/BAG4/BIRC3/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CHUK/CLDN1/CXCL8/CYLD/EDN1/EIF5A/ENDOG/FAS/GAS6/GATA3/GBP1/GCH1/GPER1/GSTP1/HYAL2/IGBP1/KLF2/LAPTM5/MAP3K5/MBP/NFKB1/NFKBIA/NKIRAS2/NKX3-1/NOL3/NR1D1/PCK1/PCK2/PIAS3/PID1/PPP2CB/PTGS2/RORA/SELE/SFRP1/STAT1/TNFAIP3/TNFRSF1B/TNFRSF21/TRAF2/TRAF3/TRAF3IP2/TXNDC17/ZC3H12A/ZFP36/ZFP36L1
## GO:0043457 AK4/ARL2/BNIP3/CISD1/COX7A2/DNAJC15/HIF1A/IFNAR1/IFNLR1/IL10RB/NOS2/PARK7/PPIF/PRDM16/RHOA/SLC25A23/UQCC2/VCP
## GO:1901214 AARS1/ABL1/ADORA2A/AIFM1/AKT1S1/ANGPT1/ATM/BCL2L1/BDNF/BOK/BTBD10/CCL2/CCL3/CCL5/CDK5/CEBPB/CHMP4B/CHP1/CHRNA7/CLCF1/CSF1/CSF3/DDIT3/DDIT4/DHCR24/DNAJC5/EGLN3/EGR1/EIF2S1/ENO2/EPHB1/F2R/FAIM2/FOS/FYN/GATA3/GPI/GPNMB/HDGF/HIF1A/HYOU1/IKBKG/ITGA1/MAP3K5/MEF2C/MTNR1B/NCOA7/NR4A2/NR4A3/PARK7/PCSK9/PPT1/PRKCI/PSEN1/RAB29/RASA1/RHOA/ROCK1/SARM1/SERPINF1/SIX1/SIX4/SOD2/TGFB2/TGFB3/TIGAR/TMEM259/TNFRSF1B/TRAF2/UBE2M/WNT5A
## GO:0010001 ABCA2/ABL1/ADORA2A/ARHGEF10/B4GALT5/BMP2/BNIP3/BOK/CDH2/CDK5/CDK6/CLCF1/DLX2/DNER/DUSP15/ERBB2/ERCC2/FGF10/GAP43/GLI3/GPR37L1/HDAC1/IFNGR1/IL6/LIF/MAP2K1/MMP24/MTOR/MXRA8/MYOC/NAB1/NAB2/NCSTN/NKX6-1/NR1D1/PHGDH/PLEC/PSEN1/PTPN11/RHOA/SERPINE2/SH3TC2/SIRT2/SKI/SLC8A3/SOX4/SOX8/SOX9/SPINT1/TNFRSF1B/TNFRSF21/TSPAN2/VIM
## GO:0006165 ADPGK/AK4/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NME1/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TPI1
## GO:0031669 AIFM1/AKR1C3/AQP3/ATG14/ATG7/BECN1/CDKN2B/CYP24A1/DNAJC15/EIF2S1/FAM107A/FAS/FBXO22/FES/FOXO1/GABARAPL1/GABARAPL2/GAS6/IFI16/IL15/JMY/MAP1LC3C/MAP3K5/MFSD2A/MTOR/MYBBP1A/NUAK2/PCK1/PCSK9/PDK4/PRKAA2/PRKAG2/PRKD1/RNF152/SESN2/SESN3/SFRP1/SIK1/SIK2/SLC2A1/SLC38A2/SLC39A4/SNW1/SRD5A1/TFEB/TXN2/UCN2/UPP1/WDR45B/WIPI1/WNT2B/ZC3H12A
## GO:0032368 ABCA2/ABCA3/AGT/ATP8A1/BMP6/C1QTNF1/DENND5B/EDN1/EPRS1/FABP3/FURIN/ITGAV/LIPG/LPCAT3/MAP2K6/MIF/NFKB1/NKX3-1/NR1H2/NR1H3/NUS1/P2RX7/PCSK9/PLA2G4A/PLA2G6/PLA2R1/PRKCD/PTGES/PTPN11/SAR1B/SPP1/SURF4/TMEM30A
## GO:0006767 ABCD4/ALDH1L2/CLYBL/FLAD1/FPGS/GSTO1/MMADHC/MTHFD2L/MTHFS/NNMT/PDXP/RFK/SLC19A1/SLC19A2/SLC19A3/SLC25A32/SLC2A1/SLC2A3/SLC52A2/VNN1/VNN2
## GO:1990266 C1QBP/CAMK1D/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCR7/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/DAPK2/EDN1/IL23A/IRAK4/ITGA1/JAGN1/LBP/MCOLN2/NOD2/PDE4B/PF4/PF4V1/PIK3CD/SAA1/TGFB2/THBS4/TNFAIP6/TREM1
## GO:0048872 ABL1/ARMCX1/ATP5IF1/B2M/BAK1/CCN3/CCR7/CDH2/CDIN1/CDK5RAP3/CDK6/CEBPG/CITED2/CSF1/CXCL6/EPAS1/ERCC2/F2R/FADD/FAS/FSTL1/GATA3/GLIS2/GPI/HIF1A/IL6/IL7/IL7R/INHA/INHBA/ISG15/KITLG/KLF13/KLF2/LGALS9/LGR4/LPCAT3/MEF2C/MIF/MPIG6B/NCSTN/P2RX7/PDE4B/PIK3CB/PIK3CD/PRDX1/PRDX2/PRMT1/PTPN11/SFXN1/SLC11A2/SLC15A4/SLC25A5/SOS2/SOX4/SOX9/STAT1/STAT5B/TCIRG1/TNFAIP3/TNFSF14/TRAF3IP2/TSC22D3/ZFP36/ZFP36L1
## GO:0051403 ADORA2B/AGT/ARHGEF6/BMP2/CCR7/CRYAB/CYLD/DIXDC1/DNAJA1/DUSP1/DUSP15/DUSP16/DUSP3/EPHB1/FAS/FKTN/FOXO1/GADD45B/GSTP1/IGBP1/IGFBP6/IL26/IRAK4/LGALS9/MAP2K1/MAP2K3/MAP2K6/MAP3K13/MAP3K3/MAP3K5/MAPK11/MAPKAPK2/MINK1/NFKB1/NOD2/PDCD4/PHLPP1/PRDX1/PRMT1/PTGER4/RASGRP1/RELL1/RIPK2/SEMA3A/SFRP1/SFRP2/SH3RF2/SIRPA/STK39/TGFB2/TPD52L1/TRAF2/TRAF3/UNC5CL/WNT5A/ZC3H12A/ZFP36/ZFP36L1
## GO:1902600 ATP1A1/ATP1A2/ATP1A3/ATP5F1B/ATP5MF/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/ATPSCKMT/CHP1/COX17/COX4I1/COX5A/COX5B/COX6B1/COX7B/CYB5A/MFSD3/NDUFA4/PARK7/PPIF/RNASEK/SLC11A2/SLC15A3/SLC15A4/SLC25A3/SLC25A5/SLC9A3/SLC9A9/TCIRG1/UQCRC1/UQCRFS1
## GO:0018126 ASPH/EGLN1/EGLN3/ERO1A/FKBP10/OGFOD1/P3H4/P4HA1/P4HA3/P4HB/PLOD1/PLOD2
## GO:2001014 AKIRIN1/DDX17/DDX5/EPHB1/MEF2C/MSTN/RBFOX1/SIX1/SIX4/UQCC2
## GO:0062012 ADCYAP1R1/ADIPOR1/ADM/ADORA2B/AK4/AKR1C3/APPL2/ARL2/ATP2B4/ATPSCKMT/BHMT/BMP2/BMP6/C1QTNF1/C1QTNF3/CLYBL/DDIT4/DHCR7/DKK3/DYRK2/EGR1/ENO1/FABP3/FMO5/FOXO1/GPER1/HDAC4/HIF1A/HRH1/IGFBP4/INSIG2/IRS1/KHK/LACC1/LPCAT3/MBTPS2/MFSD2A/MST1/NFKB1/NNMT/NOS2/NR1D1/NR1H2/NR1H3/NR4A3/OGT/P2RX7/P2RY6/PARK7/PDK1/PDK4/PGAM1/PHKG2/PID1/PPP1R3B/PPP1R3C/PPTC7/PRKAA2/PRKAG2/PSEN1/PTGS2/PTH1R/RORA/RUBCNL/SCAP/SEC14L2/SELENOS/SESN2/SIK1/SLC2A6/SLC7A7/SOX9/TFF3/TIGAR/TRIB3/VCP
## GO:0060326 AKIRIN1/C1QBP/C5/CAMK1D/CCL11/CCL2/CCL20/CCL28/CCL3/CCL5/CCL7/CCL8/CCN3/CCR7/CH25H/CMKLR1/CSF1/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/CYP7B1/DAPK2/DDT/DOCK4/DUSP1/EDN1/EDNRB/EPHB1/FGF18/GAB1/GAS6/HRH1/HSD3B7/HSPB1/IL16/IL23A/IL6/ITGA1/KDR/LBP/LGALS9/LOX/MIF/MSMP/MSTN/NINJ1/NOD2/PDE4B/PF4/PF4V1/PIK3CD/PLEC/PRKCD/PRKD1/RAB13/SAA1/SCG2/SLC12A2/SMOC2/STK39/SWAP70/TGFB2/THBS4/TNFAIP6/TNFSF14/TREM1/WNT5A
## GO:0046939 ADPGK/AK4/ALDOA/ARL2/DDIT4/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NME1/OGT/P2RX7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PKM/PRKAA2/PRKAG2/PSEN1/SLC2A6/TIGAR/TPI1
## GO:0031032 ABL1/ACTC1/ARHGEF10/BAG4/CAPN3/CFL2/CFLAR/CGNL1/CLASP2/CORO2B/CSRP1/DLC1/EDN1/EPB41/EPB41L3/EPB41L4B/EPB41L5/FHOD3/FRMD7/ITGB1/MEF2A/MKKS/MTOR/MYO18A/MYOC/MYPN/PGM5/PLEC/PPFIA1/PPM1E/PTGER4/RAPGEF3/RHOA/RHPN1/ROCK1/ROCK2/SFRP1/SIX4/TGFB3/TGFBR1/TJP1/TMOD4/TNNT2/TNNT3/TPM1/TRPM7/TTC8/WAS/WASF2
## GO:0050920 AKIRIN1/C1QBP/C5/CAMK1D/CCL2/CCL3/CCL5/CCL7/CCN3/CCR7/CMKLR1/CSF1/CXCL10/CXCL8/DAPK2/DDT/DUSP1/DUSP3/EDN1/ELANE/F3/FGF10/FGF18/GAS6/HSPB1/IL16/IL23A/IL6/KDR/LBP/LGALS9/MEGF8/MIF/MSTN/NOD2/PLXNA3/PLXNA4/PRKD1/ROBO2/SCG2/SEMA3A/SEMA3B/SEMA3D/SEMA4A/SEMA5B/SMOC2/STK39/SWAP70/THBS4/TNFAIP6/TNFSF14/TUBB2B/USP14/WNT5A
## GO:0006099 ACO1/ACO2/DLAT/IDH3A/MDH1/MDH1B/MDH2/PDHB/SDHA/SDHAF2/SDHC/SUCLA2/SUCLG2
## GO:0034311 ABCA2/ACER3/ASAH1/ASAH2/ASAH2B/DEGS2/GCH1/NAAA/PTS/QDPR/SPTLC2/SPTSSA/SPTSSB
## GO:0006576 ALDH2/AMD1/AOC2/AZIN1/DBH/DMGDH/EDNRA/EPAS1/GATA3/GCH1/GDE1/HDAC10/HNMT/IL4I1/KYNU/MAOA/MAOB/NAAA/NNMT/NPR1/NR4A2/OAZ1/OAZ2/PARK7/RNF180/SAT1/SLC44A1/SMOX/SRM/TGFB2
## GO:0006672 ABCA2/ACER3/ALOXE3/ASAH1/ASAH2/ASAH2B/B3GALT1/B3GALT2/B4GALNT1/B4GALT4/B4GALT5/CERS6/CERT1/DEGS2/GLA/HEXB/NEU1/ORMDL2/P2RX7/PLA2G6/PRKCD/SGMS2/SIRT3/SMPD2/SPTLC2/SPTSSA/SPTSSB/ST3GAL1/ST3GAL5/ST6GALNAC4
## GO:1902903 ABL1/ADD1/ADD3/AEBP1/ARF1/ARHGEF10/ARHGEF2/ARL2/AVIL/BAG4/BRK1/CAPG/CAPZA2/CAPZB/CCL11/CCR7/CFL2/CGNL1/CHADL/CHRNA7/CLASP2/CORO2B/COTL1/CRACD/CRYAB/CSF3/DLC1/DSTN/EDN1/EML2/FCHSD1/FCHSD2/FES/FHOD3/FKBP4/FRMD7/GSN/HCK/KIRREL1/MAP1B/MAP6D1/MKKS/MTOR/MTSS1/MYADM/MYOC/NUMA1/PARK7/PDXP/PFDN2/PFDN6/PPFIA1/PPM1E/PRKCD/PSEN1/PTGER4/RANGRF/RAPGEF3/RASA1/RHOA/RHPN1/ROCK1/ROCK2/SCIN/SFRP1/SNX9/SPTB/SPTBN5/SSH2/SSH3/SWAP70/SYNPO/TGFB3/TGFBR1/TJP1/TMOD4/TNXB/TOGARAM1/TPM1/TTC8/WAS/WASF2
## GO:0043270 ABL1/ADCYAP1R1/ADORA2A/AGT/AHCYL1/AKAP6/ANK3/ATP1B1/ATP1B3/ATPSCKMT/BAK1/BDKRB1/CACNG4/CAMK2A/CAPN3/CCL2/CCL3/CCL5/CDK5/CEBPB/CHP1/COX17/CTSS/CXCL10/EDN1/EDNRA/EPHB2/F2R/FHL1/FXYD1/GJC2/GLRX/GPD1L/GPER1/GSTM2/GSTO1/IFNGR2/ITGB1/KCNA1/KCNJ2/KCNN4/LRRC55/MAP2K6/MIF/NDUFA4/NLGN3/ORAI1/P2RX7/P2RY6/PDZK1/PLA2G4A/PLA2G6/PLA2R1/PSEN1/PTGES/RAB3B/RAB3GAP1/SCN4B/SLC12A2/STC1/STIMATE/STK39/VMP1
## GO:0048771 ACVR2B/AGT/BAK1/CCDC154/CD38/CSPG4/CTSK/DBH/EDNRA/ELF3/EPAS1/F2R/FGF10/FOXC2/GJA1/GPNMB/GPR137/HIF1A/HOXA3/IL15/IL23A/IL6/IL7/LGR4/LIF/MEF2C/NOL3/P2RX7/P3H4/PDK4/PTH1R/ROCK1/ROCK2/RSPO3/SFRP1/SPP1/TCIRG1/TFRC/TGFB3/THBS4/TMEM119/TMEM64/TNFAIP3/TNFRSF11B
## GO:0120163 ABHD6/ACOT11/ACVR2B/ARRDC3/DDIT3/FOXC2/IL15/IP6K1/LAMA4/LGR4/MAP2K6/NPR3/NR1D1/NR1H2/NR1H3/PLCL1/ZNF423
## GO:1990845 ABHD6/ACOT11/ACVR2B/ADIPOR1/APPL2/ARRDC3/CEBPB/CMKLR1/DBH/DDIT3/DECR1/ELOVL3/EPAS1/FOXC2/G0S2/GJA1/GRB10/IL15/IP6K1/KSR2/LAMA4/LCN2/LGR4/LPIN1/MAP2K6/MFN2/NPR3/NR1D1/NR1H2/NR1H3/OGT/OXTR/PER2/PLAC8/PLCL1/PRDM16/SCD/SLC25A5/THADA/TSHR/ZNF423
## GO:0031098 ADORA2B/AGT/ARHGEF6/BMP2/CCR7/CRYAB/CYLD/DIXDC1/DNAJA1/DUSP1/DUSP15/DUSP16/DUSP3/EPHB1/FAS/FKTN/FOXO1/GADD45B/GSTP1/IGBP1/IGFBP6/IL26/IRAK4/LGALS9/MAP2K1/MAP2K3/MAP2K6/MAP3K13/MAP3K3/MAP3K5/MAPK11/MAPKAPK2/MINK1/NFKB1/NOD2/PDCD4/PHLPP1/PRDX1/PRMT1/PTGER4/RASGRP1/RELL1/RHOA/RIPK2/SEMA3A/SFRP1/SFRP2/SH3RF2/SIRPA/STK39/TGFB2/TPD52L1/TRAF2/TRAF3/UNC5CL/WNT5A/ZC3H12A/ZFP36/ZFP36L1
## GO:0051770 AKAP12/CCL2/IL33/KDR/MAP2K3/MAP2K6/NAMPT/NOD2/STAT1
## GO:0090075 ADORA2B/ATP1A1/ATP1A2/ATP1B1/CAMK2D/GSN/GSTM2/GUCY1A1/KCNJ2/KCNMA1/PDE4B/PDE4D/PDE5A/RGS2
## GO:0051346 ABL1/ADORA2A/AGT/ANGPTL4/AQP1/ARL2/ATP5IF1/BAG4/BIRC3/BST2/C3/C5/CAMK2A/CD109/CHP1/COL4A3/COL7A1/CPAMD8/CRYAB/CST6/DHCR24/EGLN1/FICD/FKBP1A/FURIN/GAPDH/GAS6/GCHFR/GPI/GPSM1/IFI16/IFI6/IGBP1/ITIH3/ITIH5/LAMP3/LAMTOR5/LPIN1/MGAT5/MICAL1/MKKS/NEIL1/NOL3/PARK7/PI3/PIH1D1/PLA2R1/PPP1R15A/PPP1R26/PPP4R4/PRDX3/PRKCZ/PROS1/PTGS2/PTX3/RASA4/RGS2/ROCK1/ROCK2/SERPINB7/SERPINE2/SERPINF1/SERPINI1/SFRP2/SIAH2/SLC39A14/SLPI/SPINK13/SPINK6/SPINT1/STYXL1/TFPI/TFPI2/TGFB2/TIMP2/TIMP3/TIMP4/TNFSF14/TTC8/USP14/WFDC1
## GO:0016266 B3GNT2/B3GNT7/B4GALT5/C1GALT1/C1GALT1C1/C1GALT1C1L/GALNT2/GALNT5/GALNT8/GCNT3/POFUT1/POMGNT1/ST3GAL1/ST3GAL4/ST6GALNAC4/XXYLT1
## GO:0042401 ALDH2/AMD1/AZIN1/DBH/GATA3/GCH1/NNMT/NR4A2/OAZ1/OAZ2/PARK7/SAT1/SMOX/SRM/TGFB2
## GO:0031331 ABCA2/ABHD5/ATM/ATP5IF1/ATXN3/BAG2/BECN1/BNIP3/CNOT2/CNOT8/CSNK1D/CSNK1E/DDA1/DDRGK1/DHRSX/ENDOG/EXOSC2/EXOSC9/FBXO22/FOXO1/FURIN/GPSM1/HIF1A/IKBKG/IL6/IRS1/KDR/LAPTM5/LRSAM1/MAGEF1/MOV10/NANOS1/NOD2/OPTN/OSBPL7/P2RX7/PAFAH1B2/PAIP1/PAN2/PARK7/PCSK9/PHKG2/PIAS1/PIK3CB/PIM2/PLEKHF1/PLK3/PRKAA2/PRKCD/PRKD1/PRR5L/PSEN1/PSMC4/PSMC5/PSMD10/PTPN1/RAB3GAP1/RAD23A/RGMA/RIPK2/RNF128/RNF152/RNF180/RNF19A/ROCK1/ROCK2/SCOC/SESN2/SESN3/SH3RF2/SIRT2/SLC25A5/SMURF1/SNX30/SNX9/SPTLC2/STING1/TFEB/TMEM259/TMTC3/TNFAIP3/TNFRSF1B/TP53INP2/TPCN1/TRIB3/TRIM5/TRIM8/UBQLN2/VCP/VDAC1/WIPI1/ZC3H12A/ZC3H12D/ZFP36/ZFP36L1
## GO:0044089 ABCA1/ABCA3/ABL1/AGRN/AGT/AJUBA/AKIRIN1/ARHGEF10/ARL2/ASAP1/ATM/ATR/AVIL/BAG4/BAK1/BDNF/BECN1/BID/BMF/BRK1/CCL11/CCR7/CLASP2/CLDN1/CLSTN1/CLSTN2/CNOT2/CRACD/CSF2/CSF3/EEF2K/EPB41L5/EPHB1/EPHB2/FCHSD1/FCHSD2/FERMT1/FES/FLOT1/FRMD7/G3BP1/HAS3/HCK/ICE1/ISG15/KDR/KIRREL1/LRRN3/LRSAM1/MAP1B/MAPK15/MIEN1/MMP1/MMP3/MPHOSPH8/MSTN/MTOR/MTSS1/MYOC/NEK7/NLGN2/NLGN3/NR1H2/NUMA1/OXTR/P2RX7/PAN2/PARK7/PIH1D1/PPM1E/PPP2R5B/PSMC5/PTPRJ/RAB3GAP1/RALA/RAPGEF3/RHOA/ROCK1/ROCK2/SEMA4A/SEPTIN7/SFRP1/SLF2/SNF8/SNX30/SNX9/SOX9/SRPX2/STMP1/SWAP70/SYNPO/TASOR/TFRC/TGFB3/TGFBR1/THBS2/TOGARAM1/TPM1/TRABD2B/VCP/WARS1/WASF2/WIPI1
## GO:0070203 CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/TCP1
## GO:1904869 CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/TCP1
## GO:1904871 CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/TCP1
## GO:0006596 AMD1/AZIN1/NNMT/OAZ1/OAZ2/SAT1/SMOX/SRM
## GO:0030007 ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP1B3/KCNJ2/KCNMA1/SLC12A2
## GO:0098760 ATIC/ATP5F1B/HDGF/IL7R/LSP1/P4HB/PDIA3/STIP1
## GO:0098761 ATIC/ATP5F1B/HDGF/IL7R/LSP1/P4HB/PDIA3/STIP1
## GO:0045017 ABHD4/ABHD5/ACSL3/AGPAT3/AGPAT4/AJUBA/ANG/ATG14/ATM/AVIL/BECN1/BPNT2/C3/CHPT1/DGKA/DGKD/DGKH/ETNK2/FABP3/FAR1/FITM2/GK/HDHD5/FAM126A/IP6K1/IPMK/LPCAT1/LPCAT3/LPCAT4/LPIN1/MBOAT7/MFSD2A/NR1H2/NR1H3/OCRL/PCK1/PCK2/PGAP2/PI4K2A/PI4KA/PIGL/PIGO/PIGS/PIGU/PIGV/PIK3CB/PIK3CD/PIK3R3/PITPNM1/PLA2G4A/PLA2G6/PLD1/PLD2/PTPMT1/SELENOI/SIK1/SLC44A1/SLC44A3/SMG1
## GO:0046890 ABCA2/ABCA3/ABHD6/ACSL3/ADM/AKR1C3/ASAH1/ATP1A1/AVIL/BMP2/BMP6/C3/CHP1/CREB1/CREBL2/DHCR7/DKK3/EGR1/FABP3/FITM2/GPER1/IGFBP7/INSIG2/LPCAT1/LPCAT3/LPIN1/MBTPS2/MFSD2A/MTOR/NFKB1/NR1D1/NR1H2/NR1H3/ORMDL2/PCK1/PDK4/PLA2G6/PRKCD/PTGS2/SCAP/SEC14L2/SIK1/SIRT3/TRIB3
## GO:0016311 ACP2/ANKLE2/ATP1A1/ATP1A2/BAG4/BMP2/BPNT2/CA3/CDK5RAP3/CHP1/CTDSP2/CTDSPL/CTTNBP2NL/DLC1/DUSP1/DUSP15/DUSP16/DUSP18/DUSP3/DUSP4/DUSP5/EYA2/FKBP1A/G6PC3/HDHD2/IGBP1/IQGAP1/ITGA1/LPIN1/LRRC2/MEF2C/MGAT5/MINPP1/MTMR10/MTMR11/MTOR/NCEH1/NT5DC1/NT5DC3/OCRL/PALD1/PDP1/PDXP/PFKFB4/PHLPP1/PHPT1/PLPPR2/PPA2/PPM1E/PPM1K/PPM1M/PPP1R15A/PPP1R26/PPP1R3B/PPP1R3C/PPP2CB/PPP2R1B/PPP2R5A/PPP2R5B/PPP4R2/PPP4R4/PPP6R1/PPTC7/PRKCD/PTBP1/PTP4A1/PTP4A2/PTPMT1/PTPN1/PTPN11/PTPN13/PTPN18/PTPN21/PTPRE/PTPRJ/PTPRK/PTPRU/RCAN1/ROCK1/ROCK2/SDHAF2/SLC39A10/SMG7/SSH2/SSH3/STYXL1/SWAP70/TGFB2/TIGAR/TNS2
## GO:0032370 ABCA3/ATP8A1/BMP6/C1QTNF1/DENND5B/EDN1/FABP3/LIPG/LPCAT3/MAP2K6/MIF/NKX3-1/NR1H2/NR1H3/P2RX7/PLA2G4A/PLA2G6/PLA2R1/PRKCD/PTGES/SPP1/TMEM30A
## GO:0032231 ABL1/ARHGEF10/BAG4/CGNL1/CLASP2/CORO2B/DLC1/FRMD7/MKKS/MTOR/MTSS1/MYOC/PPFIA1/PPM1E/PTGER4/RAPGEF3/RHOA/RHPN1/ROCK1/ROCK2/SFRP1/SWAP70/SYNPO/TGFB3/TGFBR1/TJP1/TPM1/TTC8/WAS/WASF2
## GO:0018208 EGLN1/EGLN3/ERO1A/FKBP10/FKBP11/FKBP14/FKBP1A/FKBP2/FKBP4/NKTR/OGFOD1/P4HA1/P4HA3/P4HB/PPIF/PPIL1/PPIL3/PPIL6/PPWD1
## GO:0051492 ABL1/ARHGEF10/BAG4/CGNL1/CLASP2/CORO2B/DLC1/FRMD7/MKKS/MTOR/MYOC/PPFIA1/PPM1E/PTGER4/RAPGEF3/RHOA/RHPN1/ROCK1/ROCK2/SFRP1/TGFB3/TGFBR1/TJP1/TPM1/TTC8/WAS/WASF2
## GO:0110053 ABL1/ADD1/ADD3/ARF1/ARHGEF10/AVIL/BAG4/BRK1/CAPG/CAPZA2/CAPZB/CCL11/CCR7/CFL2/CGNL1/CLASP2/CORO2B/COTL1/CRACD/CSF3/DLC1/DSTN/FCHSD1/FCHSD2/FHOD3/FRMD7/GSN/HCK/KIRREL1/MKKS/MTOR/MTSS1/MYADM/MYOC/PDXP/PPFIA1/PPM1E/PRKCD/PTGER4/RAPGEF3/RASA1/RHOA/RHPN1/ROCK1/ROCK2/SCIN/SFRP1/SNX9/SPTB/SPTBN5/SSH2/SSH3/SWAP70/SYNPO/TGFB3/TGFBR1/TJP1/TMOD4/TPM1/TTC8/WAS/WASF2
## GO:0042060 ADORA2A/AJUBA/AK3/ARHGAP24/B4GALT1/C1GALT1C1/C1QTNF1/CCN4/CD109/CD9/CFLAR/CHMP1B/CHMP4B/CHMP5/CLASP2/CLDN1/COL3A1/CSRP1/DDR1/DGKA/DGKD/DGKH/DYSF/EDN1/EPB41L4B/EPHB2/EPPK1/ERBB2/F13A1/F2R/F3/F5/FERMT1/FGF10/FGFR2/FKBP10/FOXC2/FUNDC2/GAS6/GLI3/GP1BB/HIF1A/HPS4/HPS5/HSPB1/IL6/ITGB1/ITPK1/KDR/LOX/MAP3K5/MIA3/MMP12/MPIG6B/MRTFA/MTOR/PABPC4/PAPSS2/PF4/PF4V1/PIK3CB/PLA2G4A/PLAT/PLEC/PPL/PRDX2/PRKCD/PROS1/RAB27A/RAP2B/RHOA/SAA1/SERPINE2/SLC12A2/SMOC2/ST3GAL4/TBXA2R/TFPI/TFPI2/TGFB2/TGFB3/TGFBR1/THBD/TNFAIP3/TOR1A/TPM1/TSKU/WAS/WFDC1/WNT5A/YAP1
## GO:0045785 ABL1/ANGPT1/ANK3/ARL2/ATM/B2M/BAG4/BTN2A2/C1QBP/CCDC80/CCL2/CCL28/CCL5/CCR7/CD274/CD55/CD83/CDK6/CHRD/CHST2/CITED2/COL26A1/CSF1/CYTH3/DOCK5/ELANE/EMP2/EPB41L4B/EPB41L5/ERBB2/FADD/FERMT1/FLOT1/FOXC2/FOXF1/FSTL3/FYN/GATA3/GLI3/HLA-A/ICOSLG/IL15/IL23A/IL4I1/IL6/IL7/IL7R/ITGAV/JUP/KDR/LGALS9/LIF/MAP3K8/MEGF10/MYADM/MYO10/MYOC/NFKBIZ/NOD2/NR4A3/P4HB/PCK1/PDCD1LG2/PODXL/PRKCZ/PTPN11/PTPRJ/PTPRU/RARA/RASGRP1/RHOA/RIPK2/ROCK1/SAA1/SELE/SELENOK/SFRP1/SFRP2/SIRPA/SOX4/ST3GAL4/STAT5B/TFRC/TGFB2/TJP1/TNFSF14/TNFSF9/TPM1/UNC13D/UTRN/VNN1/VSIR/VWC2/WNT5A
## GO:0000422 ATG14/ATG3/ATG7/ATP5IF1/BECN1/BNIP3/CISD2/CSNK2A2/CTSK/FUNDC2/GABARAPL1/GABARAPL2/HIF1A/HK2/MAP1LC3C/MFN2/MUL1/OPTN/PARK7/SLC25A5/TIGAR/TOMM7/VDAC1/VPS13C/WDR45B/WIPI1
## GO:0061726 ATG14/ATG3/ATG7/ATP5IF1/BECN1/BNIP3/CISD2/CSNK2A2/CTSK/FUNDC2/GABARAPL1/GABARAPL2/HIF1A/HK2/MAP1LC3C/MFN2/MUL1/OPTN/PARK7/SLC25A5/TIGAR/TOMM7/VDAC1/VPS13C/WDR45B/WIPI1
## GO:0070588 ABL1/AHNAK/AKAP6/ATP1A2/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/BDKRB1/C4orf3/CACNA1C/CACNB1/CACNG4/CAMK2D/CAPN3/CATSPER1/CCL3/CCR7/CDK5/CHRNA7/CXCL10/DDIT3/EDN1/EDNRA/EDNRB/ERO1A/F2R/FKBP1A/FYN/GAS6/GJC2/GNB5/GP1BB/GPER1/GRIN3A/GSTM2/GSTO1/ITGAV/LETM1/LIME1/MCOLN1/MCOLN2/NOL3/OPRL1/ORAI1/P2RX7/P2RY6/PANX1/PDE4B/PDE4D/PKD1/PLA2G6/PRKD1/PSEN1/RASA3/SLC24A3/SLC25A23/SLC25A25/SLC35G1/SLC8A3/STIMATE/THADA/TMEM165/TMEM37/TPCN1/TRPM3/TRPM7/VDAC1/VMP1
## GO:0044262 ADCYAP1R1/ADIPOR1/B3GNT2/B3GNT7/B4GALT1/B4GALT5/BPNT2/C1QTNF1/C1QTNF3/COQ2/CSGALNACT1/DDIT4/DYRK2/EXT2/FOXO1/GK/GNPTAB/GPD2/GPER1/GYS1/HAS3/HDAC4/HK2/HRH1/IGFBP4/IPPK/IRS1/ISYNA1/ITPK1/KHK/MST1/NNMT/NR1D1/OCRL/OGT/P2RY6/PCK1/PCK2/PDK1/PDK4/PER2/PFKFB4/PGAM1/PHKA1/PHKA2/PHKG1/PHKG2/PLA2G4A/PPIP5K2/PPP1R3B/PPP1R3C/PRKAG2/PTH1R/RORA/RUBCNL/SCARB2/SELENOS/SESN2/SIK1/SORD/TFF3/TIGAR/TKFC/TPI1/UGP2
## GO:0071731 AIFM1/AQP1/ATP5F1A/CCR7/CFLAR/EGLN1/FOXO1/MMP3/TRAF2/TXN
## GO:0009309 ALDH2/AMD1/AZIN1/DBH/GATA3/GCH1/NNMT/NR4A2/OAZ1/OAZ2/PARK7/SAT1/SMOX/SRM/TGFB2
## GO:0061035 BMP1/BMP2/BMP6/CCN4/CHADL/CTSK/EFEMP1/FGF18/FRZB/GLI3/MAF/PTPN11/RARA/RARB/RARG/RFLNA/ZNF664-RFLNA/SCIN/SOX9/TGFBR1/WNT5A/WNT9A
## GO:0006839 AIFM1/ATP5IF1/BAG4/BAK1/BCL2L1/BCL2L2/BID/BNIP3/BOK/CAMK2A/CSNK2A2/DNAJC15/EYA2/GRPEL1/HK2/HPS4/HSPA4/LEPROT/MFF/MFN2/MTX2/MUL1/NDUFA13/NOL3/NPTX1/PDCD5/PPIF/PSEN1/ROMO1/RTL10/SAMM50/SLC25A30/SLC25A5/TIMM10B/TIMM13/TIMM17A/TIMM21/TIMM22/TIMM23/TIMM8B/TOMM40/TOMM5/TOMM7/UBL5/VDAC2
## GO:0010638 ABL1/ANAPC4/ARHGEF10/ARL2/ASAP1/ATM/ATP5IF1/ATR/BAG4/BECN1/BID/BMF/BNIP3/BOK/BRK1/C2CD5/CCL11/CCR7/CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/CDK5/CFL2/CNOT2/CRACD/CSF2/CSF3/DOC2B/DSTN/EDN1/ENDOG/FAM162A/FCHSD1/FCHSD2/FES/G3BP1/GPER1/GSN/HCK/HIF1A/HOXA13/KDR/KIRREL1/LRSAM1/MAP1B/MAPK15/MFF/MLLT11/MPHOSPH8/MTOR/MTSS1/MUL1/MYOC/NEK7/NUMA1/P2RX7/PAN2/PARK7/PDCD5/PDXP/PFDN2/PLA2G6/PLXNA3/PPIF/PPM1E/PRRT2/RAB3GAP1/RALA/RAPGEF3/RHOA/ROCK2/SCIN/SEPTIN7/SFRP1/SIRT2/SLC25A5/SLF2/SNX30/SNX9/SPIRE1/SSBP1/SURF4/SWAP70/SYNPO/TASOR/TCP1/TGFB3/TGFBR1/TNFSF10/TNKS/TOGARAM1/TPM1/VDAC1/WAS/WASF2/WIPI1/WNT5A/XRCC5
## GO:0001659 ABHD6/ACOT11/ACVR2B/ADIPOR1/APPL2/ARRDC3/CEBPB/CMKLR1/DBH/DDIT3/DECR1/EDNRB/EGR1/ELOVL3/EPAS1/FOXC2/FOXO1/G0S2/GJA1/GRB10/IL15/IP6K1/KSR2/LAMA4/LCN2/LGR4/LPIN1/MAP2K6/MFN2/NPR3/NR1D1/NR1H2/NR1H3/OGT/OXTR/PER2/PLAC8/PLCL1/PRDM16/PTGES/PTGS2/SCD/TSHR/ZNF423
## GO:0097529 AKIRIN1/C1QBP/C5/CAMK1D/CCL11/CCL2/CCL20/CCL3/CCL5/CCL7/CCL8/CCN3/CCR7/CD9/CMKLR1/CSF1/CXCL1/CXCL10/CXCL2/CXCL3/CXCL5/CXCL6/CXCL8/DAPK2/DDT/DUSP1/EDN1/EDNRB/HRH1/IL23A/IL6/IRAK4/ITGA1/JAGN1/LBP/MCOLN2/MIF/MSMP/MSTN/NOD2/PDE4B/PF4/PF4V1/PIK3CD/PTGER4/SAA1/SCG2/SIRPA/STAT5B/SWAP70/TGFB2/THBS4/TNFAIP6/TREM1
## GO:0045926 ADIPOR1/AGT/BDKRB1/BST2/CAPRIN2/CCN3/CDK5/CITED2/CRYAB/DACT3/DIP2B/ENO1/FGFR3/FHL1/FRZB/GDF15/GJA1/HIF1A/HYAL2/INHBA/JADE1/MAPK11/MSTN/MT1E/MT1F/MT1G/MT1X/MT2A/MUL1/NDUFA13/NPR1/OSGIN2/PHB1/PLAC8/PLXNA3/PPT1/PTPRJ/RGS2/SEMA3A/SEMA3B/SEMA3D/SEMA4A/SEMA5B/SERPINE2/SERTAD2/SESN2/SFRP1/SFRP2/SMARCA2/SPAG9/SPP1/STC2/TGFB2/TMPRSS4/WFDC1/WNT5A/WWC1
## GO:0002064 ADD1/AKR1B1/B4GALT1/BMP6/C1GALT1/CDH2/CDK6/CLDN1/CLIC4/COL15A1/COL18A1/COL22A1/E2F4/EDNRA/EDNRB/EPB41L5/EXPH5/FEM1B/FNDC3A/FOXC2/GJA1/HIF1A/HOXA13/ICAM1/IQGAP1/KLF5/MYADM/NKX6-1/PDE4D/PLEC/PODXL/RAB13/RAPGEF3/RARA/RARB/RARG/ROCK1/ROCK2/S1PR3/SHROOM3/SOX8/SOX9/STC1/TIGAR/TJP1/TJP2/VIM/WNT5A/YAP1
## GO:0006754 AK4/ALDOA/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/ENO1/PID1/PRKAG2/VCP
## GO:0038066 BMP2/CYLD/DUSP1/GADD45B/LGALS9/MAP2K3/MAP2K6/MAP3K3/MAP3K5/MAPK11/MAPKAPK2/MINK1/PHLPP1/PRMT1/RELL1/STK39/ZC3H12A/ZFP36/ZFP36L1
## GO:0060350 BMP6/BPNT2/COL2A1/COL3A1/CSGALNACT1/EXT2/FGF18/FGFR3/MEF2C/NAB1/NAB2/RARA/RARB/RARG/SOX9/STC1/THBS3/TMEM119/TSKU
## GO:0035107 AFF3/ASPH/BAK1/BPNT2/CACNA1C/COL2A1/COL3A1/CRABP2/FBN2/FGF10/FGF9/FGFR2/FRAS1/GJA1/GLI3/HDAC1/HOXA13/INTU/MBNL1/MEGF8/MKS1/PCSK5/PLXNA2/PSEN1/RARB/RARG/RSPO2/SALL4/SFRP2/SKI/SOX4/SOX9/TBX4/TGFB2/TMEM231/TULP3/WNT5A
## GO:0035108 AFF3/ASPH/BAK1/BPNT2/CACNA1C/COL2A1/COL3A1/CRABP2/FBN2/FGF10/FGF9/FGFR2/FRAS1/GJA1/GLI3/HDAC1/HOXA13/INTU/MBNL1/MEGF8/MKS1/PCSK5/PLXNA2/PSEN1/RARB/RARG/RSPO2/SALL4/SFRP2/SKI/SOX4/SOX9/TBX4/TGFB2/TMEM231/TULP3/WNT5A
## GO:0010822 ATP5IF1/BID/BMF/BNIP3/BOK/ENDOG/FAM162A/GPER1/HIF1A/KDR/MFF/MLLT11/MUL1/PARK7/PDCD5/PLA2G6/PPIF/RALA/SLC25A5/SPIRE1/SSBP1/TNFSF10/VDAC1
## GO:0022411 ADAMTS15/ADD1/ADD3/AIFM1/ARHGEF2/ASPH/ATG14/ATG3/ATG7/ATP2A2/ATP5IF1/AVIL/BECN1/BNIP3/BOK/C3/CAPG/CAPZA2/CAPZB/CDK5/CDK5RAP3/CFL2/CHMP1B/CHMP4B/CHMP5/CISD2/CLASP2/CRACD/CSNK2A2/CTSK/CTSS/DDIT4/DDR1/DDRGK1/DSTN/DUSP3/EIF5A/ELANE/ENDOG/EPG5/ETF1/FLOT1/FUNDC2/FURIN/GABARAPL1/GABARAPL2/GFM2/GPER1/GRWD1/GSN/HIF1A/HK2/IL6/LAMC1/LPIN1/MAP1B/MAP1LC3C/MAP6D1/MAPRE2/MCOLN1/MCTS1/MFN2/MICAL1/MMP1/MMP10/MMP12/MMP3/MUL1/NSF/OGFOD1/OPTN/PARK7/PDXP/PEX14/PHF23/PLK3/RUBCNL/SCIN/SH3PXD2B/SLC25A5/SMARCD2/SPTB/SPTBN5/STING1/SWAP70/TGFB3/TGFBR1/TIGAR/TMOD4/TOMM7/VCP/VDAC1/VMP1/VPS13C/WDR45B/WIPI1
## GO:0032970 ABL1/ABL2/ADD1/ADD3/ARF1/ARHGEF10/ATP1A2/ATP2A2/AVIL/BAG4/BRK1/BST2/CACNA1C/CAMK2D/CAPG/CAPZA2/CAPZB/CCL11/CCR7/CDK5/CFL2/CGNL1/CLASP2/CORO2B/COTL1/CRACD/CSF3/DIXDC1/DLC1/DSTN/EDN1/FAM107A/FCHSD1/FCHSD2/FES/FHOD3/FRMD7/GSN/HCK/IQGAP1/JUP/KCNJ2/KIRREL1/MKKS/MTOR/MTSS1/MYADM/MYOC/PDE4B/PDE4D/PDXP/PHPT1/PPFIA1/PPM1E/PRKCD/PTGER4/RANGRF/RAPGEF3/RASA1/RHOA/RHPN1/RND3/ROCK1/ROCK2/SCIN/SFRP1/SNX9/SPTB/SPTBN5/SSH2/SSH3/STC1/SWAP70/SYNPO/TGFB3/TGFBR1/TJP1/TMOD4/TNNC1/TNNT2/TPM1/TTC8/WAS/WASF2
## GO:0006493 B3GNT2/B3GNT7/B4GALT5/B4GAT1/C1GALT1/C1GALT1C1/C1GALT1C1L/FKTN/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/IL15/OGA/OGT/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/ST3GAL1/ST3GAL4/ST6GALNAC4/TMTC3/XXYLT1
## GO:0009199 AK3/AK4/ALDOA/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/CTPS1/ENO1/ENTPD7/NME1/PID1/PRKAG2/RAB23/RHOA/UCK2/VCP
## GO:0043281 ADORA2A/AIFM1/AQP1/ATP2A3/BAK1/BID/BIRC3/BOK/CFLAR/COL4A3/CRYAB/CYCS/DHCR24/DLC1/EGLN3/F2R/F3/FAM162A/FAS/GAS6/GPER1/GPI/GSN/HSPE1/IFI6/IGBP1/LAMP3/LAMTOR5/LAPTM5/LGALS9/MAP3K5/MICAL1/MTCH1/MUL1/NDUFA13/NKX3-1/NOL3/PARK7/PDCD5/PIH1D1/PRDX3/PTGS2/RHOA/SFRP2/SIAH2/TNFSF10/TNFSF14/UACA/VCP
## GO:0006595 AMD1/AZIN1/HDAC10/NNMT/OAZ1/OAZ2/SAT1/SMOX/SRM
## GO:0042339 B3GNT2/B3GNT7/B4GALT4/B4GAT1/CHST2/CHST5/GNS/ST3GAL1/ST3GAL4
## GO:0034767 ABL1/AGT/AKAP6/ANK3/ATP1B1/ATP1B3/ATPSCKMT/BDKRB1/CACNG4/CAPN3/CCL2/CDK5/CHP1/COX17/CTSS/CXCL10/EDN1/EDNRA/EPHB2/F2R/FXYD1/GJC2/GLRX/GPER1/GSTM2/GSTO1/IFNGR2/ITGB1/KCNA1/KCNJ2/KCNN4/LRRC55/NDUFA4/NLGN3/P2RX7/P2RY6/PDZK1/PSEN1/STIMATE/STK39/VMP1
## GO:0046467 A4GALT/ABCA2/ACER3/ALOXE3/ASAH1/ASAH2/ASAH2B/B3GALT1/B3GALT2/B4GALNT1/B4GALT4/B4GALT5/CERS6/DEGS2/ELOVL2/ELOVL3/GAL3ST2/ORMDL2/P2RX7/PGAP2/PIGL/PIGO/PIGS/PIGU/PIGV/PLA2G6/PRKCD/PRKD1/SGMS2/SIRT3/SMPD2/SPTLC2/SPTSSA/SPTSSB/ST3GAL1/ST3GAL4/ST3GAL5/ST6GALNAC4
## GO:0006874 ABL1/ABL2/ADCYAP1R1/ADM/AGT/AKAP6/ATP13A3/ATP1A2/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP7B/BAK1/BDKRB1/BNIP3/BOK/C1QTNF1/CACNA1C/CAMK2D/CAPN3/CCL11/CCL28/CCL3/CCL5/CCL7/CCL8/CCR7/CD38/CD55/CDK5/CHRNA7/CIB2/CMKLR1/CXCL10/DDIT3/DMPK/EDN1/EDNRA/EDNRB/ELANE/ERO1A/F2R/FKBP1A/FYN/GP1BB/GPER1/GRINA/GSTM2/GSTO1/HEXB/ITGAV/LETM1/LIME1/MCOLN1/MCOLN2/MTNR1B/NOL3/OPRL1/OXTR/P2RX7/P2RY6/PDE4D/PDZD8/PIK3CB/PKD1/PLA2G6/PRKD1/PSEN1/PTGER4/PTGFR/PTH1R/RASA3/RMDN3/S1PR3/SAA1/SELENOK/SLC24A3/SLC25A23/SLC30A1/SLC35G1/SLC8A3/STC1/STC2/SWAP70/TBXA2R/TCIRG1/THADA/TMEM165/TMEM64/TPCN1/TSPOAP1/VAPB/WNT5A
## GO:0032412 AHCYL1/AHNAK/AKAP6/ANK3/ANO9/ATP1A2/ATP1B1/ATP1B3/ATPSCKMT/C4orf3/CACNB1/CACNG4/CAMK2D/CCL2/CDK5/CHP1/COX17/CTSS/EDN1/EDNRA/EPHB2/FGF11/FHL1/FKBP1A/FXYD1/FXYD5/GLRX/GNB5/GPD1L/GSTM2/GSTO1/HECW1/IFNGR2/ITGB1/KCNA1/KCNE4/LRRC55/MEF2C/MINK1/MTNR1B/NDUFA4/NLGN2/NLGN3/OPRL1/P2RY6/PCSK9/PDE4B/PDE4D/PDZK1/PLA2G6/PPIF/RANGRF/SCN2B/SCN4B/SHISA6/STIMATE/STK39/THADA/UTRN/VMP1
## GO:0055072 ACO1/ATP6AP1/ATP6V0D1/ATP6V1G1/B2M/BMP6/BOLA2/CCDC115/CYB561A3/CYBRD1/EPAS1/FTH1/GLRX3/HIF1A/HYAL2/LCN2/NCOA4/SLC11A2/SLC25A28/SLC39A14/SLC39A8/SOD2/STEAP1/STEAP4/TFRC
## GO:0048538 ABL1/ATM/CITED2/CTC1/FADD/FGF10/GATA3/HOXA3/LMO4/MAD1L1/MAP2K1/PRDX2/PSEN1/SIX1/SIX4/TGFBR1
## GO:0021602 ADARB1/ATP8B1/CITED2/EPHB1/EPHB2/GLI3/HOXA3/NRP2/PLXNA3/PLXNA4/SEMA3A/SIX1
## GO:0032869 ADIPOR1/AGT/AP3S1/APPL1/APPL2/C2CD5/CCND3/CFLAR/EEF2K/EPRS1/FOXC2/FOXO1/GAB1/GRB10/HDAC5/INSIG2/IRS1/LPIN1/MSTN/MYO1C/OGT/OSBPL8/PCK1/PCK2/PCSK9/PDE3B/PDK4/PID1/PIK3R3/PKM/PRKCD/PRKCI/PRKCZ/PTPN1/PTPN11/PTPRE/RAB13/SELENOS/SESN3/SIK2/SLC29A2/SLC39A14/SRD5A1/STAT1/TNS2/TRIB3/YWHAG/ZFP36L1/ZNF106
## GO:0071559 ABL1/ADAMTSL2/APPL1/APPL2/BAMBI/BCL9L/BMP2/CD109/CDKN2B/CFLAR/CILP/CITED2/CLDN1/CLEC3B/COL3A1/COL4A2/DKK3/DUSP15/EDN1/EPB41L5/FBN1/FBN2/FERMT1/FGFR2/FKBP1A/FOS/FURIN/FYN/GDF15/HYAL2/IL17RD/LDLRAD4/LOX/LRRC32/LTBP1/MEF2C/MSTN/NR3C1/PDCD5/PMEPA1/PRDM16/PTPRK/ROCK1/ROCK2/SFRP1/SKI/SMAD9/SMURF1/SNW1/SNX25/SOX9/STRAP/TGFB2/TGFB3/TGFBR1/WNT5A/ZEB1/ZFP36L1/ZNF703
## GO:0055074 ABL1/ABL2/ADCYAP1R1/ADM/AGT/AKAP6/ATP13A3/ATP1A2/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP7B/BAK1/BDKRB1/BNIP3/BOK/C1QTNF1/CACNA1C/CAMK2D/CAPN3/CCL11/CCL28/CCL3/CCL5/CCL7/CCL8/CCR7/CD38/CD55/CDK5/CHRNA7/CIB2/CMKLR1/CXCL10/DDIT3/DMPK/EDN1/EDNRA/EDNRB/ELANE/ERO1A/F2R/FAM20A/FKBP1A/FYN/GP1BB/GPER1/GRINA/GSTM2/GSTO1/HEXB/ITGAV/KDR/LETM1/LIME1/MCOLN1/MCOLN2/MTNR1B/NOL3/OPRL1/OXTR/P2RX7/P2RY6/PDE4D/PDZD8/PIK3CB/PKD1/PLA2G6/PRKD1/PSEN1/PTGER4/PTGFR/PTH1R/RASA3/RMDN3/S1PR3/SAA1/SELENOK/SLC24A3/SLC25A23/SLC30A1/SLC35G1/SLC8A3/STC1/STC2/SWAP70/TBXA2R/TCIRG1/THADA/TMEM165/TMEM64/TPCN1/TSPOAP1/VAPB/WNT5A
## GO:0042176 ABCA2/ARAF/AREL1/ATG7/ATP5IF1/ATXN3/AZIN1/BAG2/CDK5RAP3/CHEK2/CSNK1D/CSNK1E/CSNK2A2/DDA1/DDRGK1/DNAAF4/FBXO22/FOXO1/FURIN/FYN/GABARAPL2/HECW1/LAMP3/LAPTM5/LPCAT1/MAGEF1/NDUFA13/NOS2/NSF/OAZ1/OAZ2/OGT/OPHN1/OSBPL7/PARK7/PCSK9/PHB1/PIAS1/PKD1/PLK3/PSEN1/PSMC4/PSMC5/PSMD1/PSMD10/PSMD14/PSMD2/PSMD3/PSME1/PSME2/PSME3/QRICH2/RAD23A/RGMA/RHBDD3/RHBDF1/RNF128/RNF180/RNF19A/ROCK1/SEC22B/SERPINE2/SH3RF2/SIRT2/SMURF1/SNF8/SNX9/SOX9/SUFU/TIMP2/TIMP3/TIMP4/TMEM259/TMTC3/TNFAIP3/TNFRSF1B/TNFSF12/TRIB3/UBQLN2/USP14/USP25/VCP/WDR91/WNT5A
## GO:0030178 APCDD1/BMP2/CDH2/CXXC4/CYLD/DACT3/DDIT3/DKK3/EGR1/FERMT1/FGF9/FOXO1/FRZB/G3BP1/GLI3/GRB10/HDAC1/HECW1/IGFBP4/IGFBP6/JADE1/LZTS2/MCC/NFATC1/NXN/PTPRU/SDHAF2/SFRP1/SFRP2/SHISA2/SHISA6/SIAH2/SOX9/TBX18/TCF7L2/TLE1/TLE2/TLE5/TMEM64/TRABD2B/TSKU/WIF1/WNT5A
## GO:0043254 ABCA1/ABCA3/ABL1/ADD1/ADD3/AJUBA/ARL2/ASAP1/ATM/ATR/AVIL/BAG4/BAK1/BID/BMF/BRK1/CAPG/CAPZA2/CAPZB/CCL11/CCR7/COTL1/CRACD/CRYAB/CSF2/CSF3/DNAJC15/EML2/FCHSD1/FCHSD2/FERMT1/FES/FHOD3/FKBP4/GSN/HCK/ICE1/ISG15/KIRREL1/LDLRAD4/LMO4/MAP1B/MAPK15/MKKS/MMP1/MMP3/MTOR/MYADM/NCLN/NEK7/NR1H2/NUMA1/PARK7/PIH1D1/PMEPA1/PPP2R5B/PRKCD/PRKCZ/PRRT2/PTGER4/PTPN11/RANGRF/RASA1/RHOA/SAR1B/SCIN/SEPTIN8/SIRT2/SLF2/SNX9/SOX9/SPTB/SPTBN5/SSH2/SSH3/STMP1/STXBP5/TFRC/TMOD4/TOGARAM1/TRABD2B/TRAF2/VCP/VDAC2/WARS1
## GO:0008207 ADM/AFP/AKR1B1/AKR1C1/AKR1C2/AKR1C3/BMP2/BMP6/DKK3/EDNRB/EGR1/HSD17B10/SRD5A1/STAT5B
## GO:0045454 BOLA2/DDIT3/ERO1A/ERP44/GLRX2/GLRX3/GSR/NOS2/PRDX1/PRDX2/PRDX3/SELENOS/TXN/TXN2
## GO:0098798 APOO/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5MJ/ATP5MK/ATP5PD/ATP5PF/BCKDHA/C15orf48/CHCHD3/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/DAP3/DLAT/DNAJC15/GRPEL1/HSD17B10/IDH3A/MCCC2/MICOS10/MRPL12/MRPL14/MRPL16/MRPL17/MRPL18/MRPL27/MRPL32/MRPL33/MRPL34/MRPL42/MRPL44/MRPL47/MRPS10/MRPS11/MRPS12/MRPS15/MRPS16/MRPS24/MRPS33/MRPS5/MRPS7/MTX2/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PDHB/PDHX/PDK1/PHB1/POLG2/PPIF/ROMO1/SAMM50/SDHA/SDHC/SLC25A5/SUCLG2/TIMM10B/TIMM13/TIMM17A/TIMM21/TIMM22/TIMM23/TIMM8B/TOMM40/TOMM5/TOMM7/UQCR11/UQCRC1/UQCRFS1/UQCRQ/VDAC1
## GO:0005743 AIFM1/AIFM3/APOO/ATAD3A/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5MJ/ATP5MK/ATP5PD/ATP5PF/ATPSCKMT/AURKAIP1/BCL2L1/BOK/C15orf48/CHCHD1/CHCHD3/COA3/COQ10B/COQ2/COQ8B/COX16/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/CPOX/CYCS/CYP24A1/CYP2E1/DAP3/DHRS13/DNAJC15/DUSP18/EFHD1/ENDOG/FPGS/GCAT/GPD2/GRPEL1/HCCS/HIGD1A/IFI6/LDHB/LDHD/LETM1/LETM2/MICOS10/MPV17/MRPL12/MRPL14/MRPL16/MRPL17/MRPL18/MRPL27/MRPL32/MRPL33/MRPL34/MRPL42/MRPL44/MRPL47/MRPS10/MRPS11/MRPS12/MRPS15/MRPS16/MRPS24/MRPS25/MRPS33/MRPS5/MRPS7/MTFP1/MTHFD2L/MTX2/MYOC/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFAF2/NDUFAF4/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PET100/PHB1/PLA2G4A/PPOX/PRODH/PSEN1/PTPMT1/PTPN1/RAB5IF/ROMO1/SAMM50/SCO2/SDHA/SDHC/SFXN1/SFXN3/SLC22A14/SLC25A11/SLC25A23/SLC25A25/SLC25A28/SLC25A3/SLC25A30/SLC25A32/SLC25A5/SQOR/STMP1/TIMM10B/TIMM13/TIMM17A/TIMM21/TIMM22/TIMM23/TIMM8B/TOMM40/UQCC2/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:0098800 APOO/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5MJ/ATP5MK/ATP5PD/ATP5PF/C15orf48/CHCHD3/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/DNAJC15/GRPEL1/MICOS10/MTX2/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PHB1/ROMO1/SAMM50/SDHA/SDHC/TIMM10B/TIMM17A/TIMM21/TIMM22/TIMM23/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:0000502 ADRM1/HSPB1/PSMA1/PSMA2/PSMA3/PSMA4/PSMA5/PSMA6/PSMA7/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9/PSMC4/PSMC5/PSMD1/PSMD10/PSMD11/PSMD14/PSMD2/PSMD3/PSMD4/PSMD7/PSMD9/PSME1/PSME2/PSME3/RAD23A/TXNL1/USP14/VCP
## GO:1905369 ADRM1/CFH/HSPB1/PIGS/PIGU/PSMA1/PSMA2/PSMA3/PSMA4/PSMA5/PSMA6/PSMA7/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9/PSMC4/PSMC5/PSMD1/PSMD10/PSMD11/PSMD14/PSMD2/PSMD3/PSMD4/PSMD7/PSMD9/PSME1/PSME2/PSME3/RAD23A/THBD/TXNL1/USP14/VCP
## GO:0070469 C15orf48/COA6/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/CYCS/HIGD1A/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/RAB5IF/SDHA/SDHC/STMP1/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:0005746 C15orf48/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/RAB5IF/SDHA/SDHC/STMP1/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:0098803 C15orf48/COA6/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/SDHA/SDHC/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:1905368 ADRM1/ATXN7L3/CFH/F3/HSPB1/PIGS/PIGU/PSMA1/PSMA2/PSMA3/PSMA4/PSMA5/PSMA6/PSMA7/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9/PSMC4/PSMC5/PSMD1/PSMD10/PSMD11/PSMD14/PSMD2/PSMD3/PSMD4/PSMD7/PSMD9/PSME1/PSME2/PSME3/RAD23A/SEC11C/SPCS1/SPCS3/TAF10/THBD/TXNL1/USP14/VCP
## GO:0005839 PSMA1/PSMA2/PSMA3/PSMA4/PSMA5/PSMA6/PSMA7/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9
## GO:0005788 AFP/ARSJ/B2M/C3/CALU/CDH2/CES2/CKAP4/COL11A2/COL12A1/COL15A1/COL18A1/COL21A1/COL22A1/COL25A1/COL26A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL7A1/COL8A2/COL9A1/COL9A2/COL9A3/COLGALT2/CSF1/DNAJB11/DNAJC3/EDEM2/MMP24-AS1-EDEM2/EDEM3/EDN1/ERLEC1/ERO1A/ERP44/F5/FBN1/FKBP10/FKBP14/FSTL1/FSTL3/FUCA2/GAS6/HYOU1/IGFBP4/IGFBP7/IL23A/IL6/KTN1/LAMB1/LAMC1/LTBP1/MANF/MFGE8/MGAT4A/MIA3/MINPP1/MXRA8/P4HA1/P4HA3/P4HB/PCSK9/PDIA3/PDIA4/PDIA5/POGLUT1/POGLUT2/PTGS2/QSOX1/RCN2/RDH5/RNASET2/SCG2/SELENOF/SELENOM/SHISA5/SIL1/SPON1/SPP1/STC2/SUMF2/TGOLN2/TMEM132A/TMEM43/TOR1A/TSPAN5/TXNDC16/WNT5A
## GO:1990204 BCKDHA/CYB5B/DLAT/GPD1L/GPD2/IDH3A/LDHA/LDHB/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOXA1/P4HA1/P4HB/PDHB/PDHX/PDK1/SDHA/SDHC/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:0005747 NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0030964 NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0045271 NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0019867 ACSL3/ACSL4/AGPAT4/AIFM2/ANKH/APOO/ARMC12/ARMCX1/ARMCX6/ATP5MC3/BAK1/BCL2A1/BCL2L1/BCL2L2/BID/BMF/BNIP3/BOK/BRI3BP/CHCHD3/CISD1/CISD2/CYB5A/CYB5B/DHCR7/DMPK/ENO1/FUNDC2/GK/HK2/IFI27/ITPRIP/LPIN1/LTC4S/MAOA/MAOB/MFF/MFN2/MGST1/MICOS10/MIGA2/MTCH1/MTOR/MTX2/MUL1/MYOC/PGRMC1/PLEC/PPP1R15A/PSEN1/PTGS2/RAB11FIP5/RMDN3/SAMM50/SARM1/SLC11A2/SLC44A1/SLC8A3/SPIRE1/STARD7/STING1/STMP1/SYNE3/TIGAR/TOMM40/TOMM5/TOMM7/VAT1/VDAC1/VDAC2/VPS13A/VPS13C
## GO:0062023 ACAN/ADAM11/ADAMTS1/ADAMTS15/ADAMTS2/AEBP1/AGRN/AGT/ANG/ANGPT1/ANGPTL4/ANGPTL5/ANGPTL7/ANXA4/BCAM/BGN/CCDC80/CCN3/CDH2/CHADL/CILP/CLEC3B/COL11A2/COL12A1/COL15A1/COL18A1/COL21A1/COL25A1/COL26A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL7A1/COL8A2/COL9A1/COL9A2/COL9A3/CSPG4/CTSS/DPT/EFEMP1/ELANE/F13A1/F3/FBN1/FBN2/FGF10/FGFR2/FRAS1/GDF15/GPC4/HDGF/ICAM1/IGFBP7/IL7/ITIH5/LAMA2/LAMA3/LAMA4/LAMB1/LAMB3/LAMC1/LAMC2/LGALS9/LOX/LOXL3/LOXL4/LTBP1/LUM/MATN2/MFAP5/MFGE8/MMRN2/MST1/MYOC/NCAM1/NID2/NTNG2/PCOLCE/PCSK6/PF4/PKM/PODN/PXDN/SEMA3B/SERPINE2/SERPINF1/SFRP1/SFRP2/SLPI/SMOC1/SMOC2/SNORC/SPON1/SRPX2/TGFB2/TGFB3/TGFBI/THBS2/THBS3/THBS4/TIMP2/TIMP3/TINAGL1/TNXB/VWC2/WNT2B/WNT5A/ZP1
## GO:0016469 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5MJ/ATP5MK/ATP5PD/ATP5PF/ATP6AP1/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/CCDC115/RNASEK/TCIRG1
## GO:0031300 A4GALT/ACER3/ANKLE2/APOO/AUP1/B2M/B4GALNT1/B4GAT1/BAK1/BET1/BID/BNIP3/CHCHD3/CHST12/CHST2/CHST5/COA3/COQ2/COX16/CSGALNACT1/CYP2E1/DERL1/DERL2/DHCR7/DMPK/DNAJC5/DOLK/DPAGT1/ELOVL2/ELOVL3/EMC3/EMC6/EMC7/ERGIC1/ESYT1/FAR1/FICD/FITM2/FKTN/FUNDC2/FURIN/GALNT2/HLA-A/HM13/HSD11B1/IER3IP1/INSIG2/KTN1/LFNG/MAN1C1/MFF/MFN2/MFNG/MICOS10/MREG/MTX2/MUL1/P2RX6/P2RX7/PCSK5/PDIA3/PET100/PEX2/PIGS/PIGU/POMGNT1/PORCN/PPOX/QSOX1/RAB27B/RAB3B/RFNG/RNF152/RNF180/SAMM50/SCD/SCO2/SELENOS/SFXN1/SFXN3/SGMS2/SLC15A4/SLC17A7/SLC22A14/SLC25A3/SLC35A1/SLC35A2/SLC35B1/SLC35B2/SLC66A1/SPCS1/SPIRE1/STING1/STX6/SUN1/TAP1/TAP2/TAPBP/TIMM17A/TIMM23/TMEM175/TMEM33/TMEM43/TOMM40/TPST1/TRABD2B/TRAM2/VOPP1/XXYLT1
## GO:0031968 ACSL3/ACSL4/AGPAT4/AIFM2/APOO/ARMC12/ARMCX1/ARMCX6/ATP5MC3/BAK1/BCL2A1/BCL2L1/BCL2L2/BID/BMF/BNIP3/BOK/BRI3BP/CHCHD3/CISD1/CISD2/CYB5A/CYB5B/DHCR7/DMPK/ENO1/FUNDC2/GK/HK2/IFI27/ITPRIP/LPIN1/LTC4S/MAOA/MAOB/MFF/MFN2/MGST1/MICOS10/MIGA2/MTCH1/MTOR/MTX2/MUL1/MYOC/PGRMC1/PLEC/PPP1R15A/PSEN1/PTGS2/RAB11FIP5/RMDN3/SAMM50/SARM1/SLC11A2/SLC44A1/SLC8A3/SPIRE1/STARD7/STING1/STMP1/SYNE3/TIGAR/TOMM40/TOMM5/TOMM7/VAT1/VDAC1/VDAC2/VPS13A/VPS13C
## GO:0005741 ACSL3/ACSL4/AGPAT4/AIFM2/APOO/ARMC12/ARMCX1/ARMCX6/ATP5MC3/BAK1/BCL2A1/BCL2L1/BCL2L2/BID/BMF/BNIP3/BOK/BRI3BP/CHCHD3/CISD1/CISD2/CYB5A/CYB5B/DMPK/FUNDC2/GK/HK2/IFI27/LPIN1/MAOA/MAOB/MFF/MFN2/MGST1/MICOS10/MIGA2/MTCH1/MTOR/MTX2/MUL1/MYOC/PGRMC1/PLEC/PPP1R15A/RAB11FIP5/RMDN3/SAMM50/SARM1/SLC11A2/SLC44A1/SLC8A3/SPIRE1/STARD7/STING1/STMP1/TIGAR/TOMM40/TOMM5/TOMM7/VAT1/VDAC1/VDAC2/VPS13A/VPS13C
## GO:0005759 AADAT/ACO2/ACOT11/AK3/AK4/ALDH1B1/ALDH1L2/ALDH2/ARL2/ATAD3A/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATXN3/BCKDHA/BCL2L1/C1QBP/CA5B/DAP3/DECR1/DHX30/DLAT/DMGDH/DNAJC15/ECHS1/FAHD1/FASTKD5/FLAD1/FPGS/GFM2/GLRX2/GLS/GRPEL1/GSR/GSTZ1/HAGH/HSD17B10/HSPE1/IDH3A/ISCA1/KARS1/LYRM4/MCCC2/MCEE/MDH2/MRPL12/MRPL14/MRPL16/MRPL17/MRPL18/MRPL27/MRPL32/MRPL33/MRPL34/MRPL42/MRPL44/MRPL47/MRPS10/MRPS11/MRPS12/MRPS15/MRPS16/MRPS24/MRPS33/MRPS5/MRPS7/MTHFD2L/MTHFS/NADK2/NAXD/NDUFA7/NDUFA9/NDUFAB1/NDUFAF1/NDUFB8/NDUFS1/NDUFS8/NMNAT3/NR3C1/NUDT9/PARK7/PC/PCK2/PDHB/PDHX/PDK1/PDK4/PDP1/PHYKPL/POLG2/PPA2/PPIF/PPM1K/PPTC7/PRDX3/PRODH/PTPN1/PYCR1/PYCR2/SARDH/SCO2/SDHAF2/SIRT3/SLC25A5/SOD2/SSBP1/STYXL1/SUCLA2/SUCLG2/TOP1MT/TSFM/TUFM/TXN2/UQCC2/VDAC1/VDAC2
## GO:0031301 A4GALT/ACER3/ANKLE2/APOO/AUP1/B2M/B4GALNT1/B4GAT1/BAK1/BET1/BID/BNIP3/CHCHD3/CHST12/COA3/COQ2/COX16/CSGALNACT1/DERL1/DERL2/DHCR7/DMPK/DOLK/DPAGT1/ELOVL2/ELOVL3/EMC3/EMC6/EMC7/ERGIC1/ESYT1/FAR1/FICD/FITM2/FKTN/FUNDC2/FURIN/GALNT2/HLA-A/HM13/HSD11B1/IER3IP1/INSIG2/KTN1/LFNG/MAN1C1/MFF/MFNG/MICOS10/MTX2/MUL1/P2RX6/P2RX7/PCSK5/PDIA3/PET100/PEX2/PIGS/PIGU/POMGNT1/PORCN/QSOX1/RFNG/RNF152/SAMM50/SCD/SCO2/SELENOS/SFXN1/SFXN3/SGMS2/SLC15A4/SLC17A7/SLC22A14/SLC25A3/SLC35A1/SLC35A2/SLC35B1/SLC35B2/SLC66A1/SPCS1/SPIRE1/STING1/STX6/SUN1/TAP1/TAP2/TAPBP/TIMM17A/TIMM23/TMEM175/TMEM33/TMEM43/TOMM40/TPST1/TRABD2B/TRAM2/VOPP1/XXYLT1
## GO:0019774 PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9
## GO:0005604 ADAMTS1/AGRN/ANG/CCDC80/COL15A1/COL18A1/COL2A1/COL4A1/COL4A2/COL4A3/COL4A4/COL7A1/COL8A2/COL9A1/COL9A3/FBN1/FRAS1/LAMA2/LAMA3/LAMA4/LAMB1/LAMB3/LAMC1/LAMC2/MMRN2/NID2/NTNG2/SERPINF1/SMOC1/SMOC2/TGFBI/THBS2/THBS4/TIMP3/VWC2
## GO:0140534 AUP1/B2M/DERL1/DERL2/DNAJB11/EMC3/EMC6/EMC7/EXT2/FKBP1A/HLA-A/HM13/HYOU1/INSIG2/MAP3K5/MLEC/ORMDL2/OSTC/P4HA1/P4HB/PDIA3/PIGS/PIGU/RPN1/RPN2/SEC11C/SEC61B/SEC61G/SELENOS/SPCS1/SPCS3/SPTLC2/SPTSSA/SPTSSB/SRPRB/STT3B/TAP1/TAP2/TAPBP/TRAF2/UFD1/VCP
## GO:0031228 A4GALT/ACER3/B4GALNT1/B4GAT1/BET1/CHST12/CHST2/CHST5/CSGALNACT1/ERGIC1/FKTN/FURIN/GALNT2/IER3IP1/LFNG/MAN1C1/MFNG/PCSK5/POMGNT1/QSOX1/RFNG/SGMS2/SLC35A1/SLC35A2/SLC35B1/SLC35B2/TPST1
## GO:0022624 ADRM1/PSMC4/PSMC5/PSMD1/PSMD11/PSMD14/PSMD2/PSMD3/PSMD4/PSMD7/PSMD9/PSME1/PSME2/PSME3
## GO:0005753 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5MJ/ATP5MK/ATP5PD/ATP5PF
## GO:0030173 A4GALT/ACER3/B4GALNT1/B4GAT1/BET1/CHST12/CSGALNACT1/ERGIC1/FKTN/FURIN/GALNT2/IER3IP1/LFNG/MAN1C1/MFNG/PCSK5/POMGNT1/QSOX1/RFNG/SGMS2/SLC35A1/SLC35A2/SLC35B1/SLC35B2/TPST1
## GO:0045259 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5MJ/ATP5MK/ATP5PD/ATP5PF
## GO:0042383 AHNAK/AHNAK2/AKAP6/ANK3/AQP1/ATP1A1/ATP1A2/ATP1B1/ATP2B4/BGN/CACNA1C/CACNG4/CAMK2D/CAPN3/CDH2/CIB2/DES/DYSF/FLOT1/FXYD1/ITGB1/KCND3/KCNJ2/LAMA2/NCSTN/PGM5/PLEC/PSEN1/SGCA/SGCB/SGCG/SLC2A1/SLC30A1/SLC38A2/SLC8A3/SNTB1/SSPN/SYNM/TGFB3/UTRN
## GO:0005838 ADRM1/PSMC4/PSMC5/PSMD1/PSMD11/PSMD14/PSMD2/PSMD3/PSMD4/PSMD7/PSMD9
## GO:0015629 ABL1/ABL2/ACTC1/ADD1/AFAP1/AHNAK/ALDOA/ALG2/AMPH/ANG/APBB3/ARHGAP21/ARSJ/ASAP1/AVIL/BMF/C10orf90/CAPG/CAPZA2/CAPZB/CD274/CDH2/CFL2/CGN/CGNL1/CIB2/CLIC4/CORIN/CORO2B/COTL1/CRYAB/CTTNBP2NL/DAAM1/DENND2A/DGKH/DLC1/DSTN/DYNLL2/FAM107A/FCHSD1/FLOT1/FYB1/FYN/GBP1/GSN/HCK/HSPB7/IFIT5/IQGAP1/JUP/KALRN/KLHL2/LASP1/LLGL2/LSP1/MICAL1/MPP4/MTSS1/MYADM/MYH7B/MYL5/MYL6/MYL6B/MYO10/MYO18A/MYO1C/MYO1D/MYO5B/MYO5C/OPHN1/PDLIM2/PDLIM4/PDXP/PGM5/PKNOX2/PRKCZ/RAPGEF3/RARA/RFLNA/ZNF664-RFLNA/RINL/SCIN/SCNN1D/SEPTIN11/SEPTIN7/SH3PXD2B/SHROOM3/SIPA1L1/SLC2A1/SNX9/SPTB/SPTBN5/SWAP70/SYNPO/TFPT/TJP1/TMEM63B/TMOD4/TNKS1BP1/TNNC1/TNNC2/TNNI1/TNNT2/TNNT3/TPM1/TPM2/UTRN/WAS/WASF2/ZNF185
## GO:1990351 ABCA2/ABCD4/ABHD12/ABHD6/AKAP6/ATP10A/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP1B3/ATP8A1/ATP8B1/ATP8B4/CACNA1C/CACNB1/CACNG4/CATSPER1/CHRFAM7A/CHRNA7/CHRNE/CLCNKB/CLIC3/CLIC4/FKBP1A/FXYD1/GRIK3/GRIN3A/KCNA1/KCNA4/KCNA6/KCND3/KCNIP1/KCNJ2/KCNMA1/KCNMB2/KCNMB4/KCNN4/LRRC55/LRRC8C/LRRC8D/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/ORAI1/OSTM1/PACC1/PDE4B/PDE4D/PEX14/PKD1/PORCN/SCN2B/SCN4B/SCNN1A/SCNN1D/SHISA6/STXBP5/TIMM10B/TIMM13/TIMM8B/TMEM30A/TMEM30B/UQCR11/UQCRC1/UQCRFS1/UQCRQ/VWC2
## GO:0033177 ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/RNASEK/TCIRG1
## GO:0042470 ATP1A1/ATP1B3/ATP6V1G2/CALU/CAPG/CCT4/DCT/DNAJC5/FLOT1/GCHFR/GPNMB/HPS4/ITGB1/MFSD12/MREG/NCSTN/P4HB/PDIA3/PDIA4/PRDX1/RAB27A/RAB27B/RAB29/RPN1/SEC22B/SERPINF1/SGSM2/SLC1A4/SLC1A5/SLC2A1/SYTL1/TFRC/TMEM33
## GO:0048770 ATP1A1/ATP1B3/ATP6V1G2/CALU/CAPG/CCT4/DCT/DNAJC5/FLOT1/GCHFR/GPNMB/HPS4/ITGB1/MFSD12/MREG/NCSTN/P4HB/PDIA3/PDIA4/PRDX1/RAB27A/RAB27B/RAB29/RPN1/SEC22B/SERPINF1/SGSM2/SLC1A4/SLC1A5/SLC2A1/SYTL1/TFRC/TMEM33
## GO:0033176 ATP6AP1/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/CCDC115/RNASEK/TCIRG1
## GO:0005774 ABCA2/ABCA3/ABCD4/ABHD6/ACP2/AHNAK/AP1B1/ATG14/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/ATP8A1/B4GALT1/BST2/CCDC115/CHMP1B/CHMP4B/CHMP5/CKAP4/CLTA/CMTM6/CYB561A3/CYBRD1/DNAJC5/DRAM1/FLOT1/GABARAPL1/GABARAPL2/GNAI1/GNB4/GPR137/GPR137C/HPS4/JMY/LAMP3/LAMP5/LAMTOR1/LAMTOR5/LAPTM5/LPCAT1/MAP1LC3C/MCOLN1/MFSD12/MGST1/MMD/MREG/MTOR/NAPG/NCSTN/NDUFC2/NEU1/NSF/OSTM1/PCSK9/PI4K2A/PLD1/PLEKHF1/PRKD1/PSEN1/RAB37/RNASEK/RNF152/RPN2/RUBCNL/SCARB2/SLC11A2/SLC15A3/SLC15A4/SLC2A6/SLC30A4/SLC39A14/SLC39A8/SLC66A1/SPAG9/STARD3NL/STING1/SURF4/TCIRG1/TFEB/THBD/TM9SF1/TMEM150C/TMEM165/TMEM175/TMEM30A/TOM1/TPCN1/VLDLR/VMP1/VNN1/VPS13A/WDFY3/WIPI1
## GO:0005581 C1QTNF1/C1QTNF3/C1QTNF6/C1QTNF7/C1QTNF8/COL11A2/COL12A1/COL15A1/COL18A1/COL21A1/COL22A1/COL25A1/COL26A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL7A1/COL8A2/COL9A1/COL9A2/COL9A3/LOX/LUM
## GO:0034774 ACLY/ALDOA/AMPD3/ATG7/B2M/C3/CCT2/CFD/CLEC3B/COTL1/CXCL1/DBH/DNAJC3/ELANE/ERP44/F13A1/F5/FUCA2/GALNS/GAS6/GLA/GNS/GPI/GSN/GSTP1/HEXB/ISLR/ITIH3/JUP/LCN2/MAN2B1/MIF/NEU1/NFKB1/NHLRC3/NIT2/OLA1/PA2G4/PAFAH1B2/PF4/PFKL/PGAM1/PKM/PLAC8/PRKCD/PROS1/PSMA2/PSMA5/PSMB1/PSMB7/PSMD1/PSMD11/PSMD14/PSMD2/PSMD3/PSMD7/PTGES2/PTX3/QSOX1/RAB27A/RNASET2/ROCK1/SERPINI1/SLPI/SRP14/TGFB2/TGFB3/TIMP2/TIMP3/UNC13D/VAT1/VCP/VPS13A/XRCC5
## GO:0005758 AIFM1/AK2/ARL2/CHCHD2/COA4/COA6/COX17/CPOX/CYCS/FKBP10/MIX23/MYOC/NDUFA8/NDUFS1/NDUFS5/PARK7/PPOX/PRELID3A/RNASET2/STMP1/THOP1/TIMM10B/TIMM13/TIMM23/TIMM8B/UQCC2
## GO:0060205 ACLY/ALDOA/AMPD3/ATG7/B2M/C3/CCT2/CFD/CLEC3B/COTL1/CXCL1/DBH/DNAJC3/ELANE/ERP44/F13A1/F5/FUCA2/GALNS/GAS6/GLA/GNS/GPI/GSN/GSTP1/HEXB/ISLR/ITIH3/JUP/LCN2/MAN2B1/MIF/NEU1/NFKB1/NHLRC3/NIT2/OLA1/PA2G4/PAFAH1B2/PF4/PFKL/PGAM1/PKM/PLAC8/PRKCD/PROS1/PSMA2/PSMA5/PSMB1/PSMB7/PSMD1/PSMD11/PSMD14/PSMD2/PSMD3/PSMD7/PTGES2/PTX3/QSOX1/RAB27A/RNASET2/ROCK1/SERPINI1/SLPI/SRP14/TGFB2/TGFB3/TIMP2/TIMP3/UNC13D/VAT1/VCP/VPS13A/XRCC5
## GO:0031970 AIFM1/AK2/ARL2/CHCHD2/COA4/COA6/COX17/CPOX/CYCS/FKBP10/IGF2R/MIX23/MYOC/NDUFA8/NDUFS1/NDUFS5/PARK7/PPOX/PRELID3A/PTGES/RNASET2/STMP1/THOP1/TIMM10B/TIMM13/TIMM23/TIMM8B/UQCC2
## GO:0045121 ABCA1/ADCYAP1R1/AHNAK/AKAP6/ANGPT1/ARID3A/ARID3C/ASAH2/ATP1A1/ATP1A2/ATP1B1/ATP2B4/ATP5F1A/BIRC3/BST2/CD55/CDH2/CFLAR/CHRNA7/DLC1/EDNRB/EMP2/ENO2/EPHB1/F2R/FADD/FAIM2/FAS/FLOT1/FURIN/FXYD1/FYN/GASK1A/GJA1/HCK/HYAL2/ICAM1/IRS1/ITGA1/ITGB1/KCNMA1/KDR/LAMTOR1/LAMTOR5/LDHB/LRP8/MYADM/MYO1C/OLR1/ORAI1/PARK7/PDZK1/PGK1/PI4K2A/PODXL/PPP2R1B/PPT1/PRKCZ/PSEN1/PTGIS/PTGS2/RANGRF/RAP2B/RTN4RL1/SELE/SGCA/SLC25A5/SLC2A1/SMPD2/TFPI/TGFBR1/TNFRSF1B/TRAF2/VDAC1
## GO:0031983 ACLY/ALDOA/AMPD3/ATG7/B2M/C3/CCT2/CFD/CLEC3B/COTL1/CXCL1/DBH/DNAJC3/ELANE/ERP44/F13A1/F5/FUCA2/GALNS/GAS6/GLA/GNS/GPI/GSN/GSTP1/HEXB/ISLR/ITIH3/JUP/LCN2/MAN2B1/MIF/NEU1/NFKB1/NHLRC3/NIT2/OLA1/PA2G4/PAFAH1B2/PF4/PFKL/PGAM1/PKM/PLAC8/PRKCD/PROS1/PSMA2/PSMA5/PSMB1/PSMB7/PSMD1/PSMD11/PSMD14/PSMD2/PSMD3/PSMD7/PTGES2/PTX3/QSOX1/RAB27A/RNASET2/ROCK1/SERPINI1/SLPI/SRP14/TGFB2/TGFB3/TIMP2/TIMP3/UNC13D/VAT1/VCP/VPS13A/XRCC5
## GO:0098857 ABCA1/ADCYAP1R1/AHNAK/AKAP6/ANGPT1/ARID3A/ARID3C/ASAH2/ATP1A1/ATP1A2/ATP1B1/ATP2B4/ATP5F1A/BIRC3/BST2/CD55/CDH2/CFLAR/CHRNA7/DLC1/EDNRB/EMP2/ENO2/EPHB1/F2R/FADD/FAIM2/FAS/FLOT1/FURIN/FXYD1/FYN/GASK1A/GJA1/HCK/HYAL2/ICAM1/IRS1/ITGA1/ITGB1/KCNMA1/KDR/LAMTOR1/LAMTOR5/LDHB/LRP8/MYADM/MYO1C/OLR1/ORAI1/PARK7/PDZK1/PGK1/PI4K2A/PODXL/PPP2R1B/PPT1/PRKCZ/PSEN1/PTGIS/PTGS2/RANGRF/RAP2B/RTN4RL1/SELE/SGCA/SLC25A5/SLC2A1/SMPD2/TFPI/TGFBR1/TNFRSF1B/TRAF2/VDAC1
## GO:0001726 ABL1/ACAP2/APPL1/APPL2/ARHGEF2/C2CD5/CAPG/CDK6/CLASP2/CSPG4/CYTH3/DLC1/EPB41L5/FAM107A/FERMT1/FGD1/FGD4/FRMD4B/IFIT5/IQGAP1/ITGAV/ITGB1/KLHL2/KSR1/MTSS1/MYADM/MYO10/MYO1C/NME1/PARD6A/PDXP/PLEKHA1/PODXL/PSD2/PSD4/PTPRJ/RASA1/RHOA/RINL/ROCK1/SNX9/TPM1/TRPM7/WASF2/WWC1
## GO:0098573 APOO/BAK1/BID/BNIP3/CHCHD3/COA3/COQ2/COX16/DMPK/FUNDC2/MFF/MFN2/MICOS10/MTX2/MUL1/PET100/PPOX/SAMM50/SCO2/SFXN1/SFXN3/SLC22A14/SLC25A3/SPIRE1/TIMM17A/TIMM23/TOMM40
## GO:0033178 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP6AP1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H
## GO:1904813 ACLY/ALDOA/AMPD3/ASAH1/ATG7/CFD/COMMD3/COTL1/CTSS/FTH1/GNS/GPI/GSN/GSTP1/JUP/MIF/PAFAH1B2/PFKL/PGAM1/PKM/PLEKHO2/PSMA2/PSMA5/PSMB1/PSMB7/PSMD11/PSMD14/PSMD2/PSMD3/PSMD7/SRP14/TIMP2/TNFAIP6/VCP
## GO:0005832 CCT2/CCT3/CCT4/CCT5/CCT6A/CCT7/TCP1
## GO:0045277 C15orf48/COA6/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/NDUFA4/UQCRFS1
## GO:0005751 C15orf48/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/NDUFA4/UQCRFS1
## GO:0016471 ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/CCDC115/RNASEK/TCIRG1
## GO:1902495 ABCA2/ABCD4/ABHD12/ABHD6/AKAP6/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP1B3/CACNA1C/CACNB1/CACNG4/CATSPER1/CHRFAM7A/CHRNA7/CHRNE/CLCNKB/CLIC3/CLIC4/FKBP1A/FXYD1/GRIK3/GRIN3A/KCNA1/KCNA4/KCNA6/KCND3/KCNIP1/KCNJ2/KCNMA1/KCNMB2/KCNMB4/KCNN4/LRRC55/LRRC8C/LRRC8D/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB11/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/ORAI1/OSTM1/PACC1/PDE4B/PDE4D/PKD1/PORCN/SCN2B/SCN4B/SCNN1A/SCNN1D/SHISA6/STXBP5/UQCR11/UQCRC1/UQCRFS1/UQCRQ/VWC2
## GO:0098644 COL11A2/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL7A1/LUM
## GO:0005766 ACLY/ATP6V0C/ATP8A1/B4GALT1/BST2/C3/CCT2/CKAP4/CMTM6/DNAJC3/DNAJC5/ELANE/FUCA2/GALNS/GLA/GNS/HEXB/LAMTOR1/LPCAT1/MAN2B1/MGST1/NCSTN/NDUFC2/NHLRC3/PA2G4/PLAC8/PRKCD/PSEN1/PSMD1/PTGES2/RAB37/RNASET2/SURF4/TMEM30A/TOM1/UNC13D/VAT1/VCP/VNN1
## GO:0042582 ACLY/ATP6V0C/ATP8A1/B4GALT1/BST2/C3/CCT2/CKAP4/CMTM6/DNAJC3/DNAJC5/ELANE/FUCA2/GALNS/GLA/GNS/HEXB/LAMTOR1/LPCAT1/MAN2B1/MGST1/NCSTN/NDUFC2/NHLRC3/PA2G4/PLAC8/PRKCD/PSEN1/PSMD1/PTGES2/RAB37/RNASET2/SURF4/TMEM30A/TOM1/UNC13D/VAT1/VCP/VNN1
## GO:0000314 DAP3/MRPL42/MRPS10/MRPS11/MRPS12/MRPS15/MRPS16/MRPS24/MRPS33/MRPS5/MRPS7
## GO:0005763 DAP3/MRPL42/MRPS10/MRPS11/MRPS12/MRPS15/MRPS16/MRPS24/MRPS33/MRPS5/MRPS7
## GO:0070069 C15orf48/COA6/COX4I1/COX5A/COX5B/COX6B1/COX6C/COX7A2/COX7B/COX7C/NDUFA4/UQCR11/UQCRC1/UQCRFS1/UQCRQ
## GO:0005938 ADD3/AGTRAP/AKAP12/ASPH/C2CD2L/C2CD5/CAPZA2/CAPZB/CDH2/CIB2/CLASP2/CLTA/COTL1/CRIP2/CYTIP/DENND2B/DLC1/DSTN/ENO1/ENO2/EPB41/EXOC1/EXOC7/FAM110C/FCHSD1/FGFR2/FLOT1/GLRX3/GNAI1/GPSM1/GSN/IQGAP1/KIAA1614/LAMC2/LASP1/LLGL2/MYADM/MYO10/MYO1D/MYO5B/NOS2/NUMA1/PARD6A/PRKCZ/PRKD1/PSEN1/RAI14/RAPGEF3/RHOA/RIC8B/RND3/SCIN/SELE/SEPTIN10/SEPTIN11/SEPTIN5/SEPTIN7/SEPTIN8/SHROOM3/SLC2A1/SNX9/SPIRE1/SPTB/SPTBN5/STIMATE/TNFAIP2/TRAF2/UTRN
## GO:0031227 ACER3/ANKLE2/AUP1/B2M/CYP2E1/DERL1/DERL2/DHCR7/DOLK/DPAGT1/ELOVL2/ELOVL3/EMC3/EMC6/EMC7/ERGIC1/ESYT1/FICD/FITM2/HLA-A/HM13/HSD11B1/INSIG2/KTN1/PDIA3/PIGS/PIGU/PORCN/RNF180/SCD/SELENOS/SGMS2/SLC35B1/SLC35B2/SPCS1/STING1/TAP1/TAP2/TAPBP/TMEM33/TRAM2/XXYLT1
## GO:0032592 APOO/BAK1/BID/BNIP3/CHCHD3/COA3/COQ2/COX16/DMPK/FUNDC2/MFF/MICOS10/MTX2/MUL1/PET100/SAMM50/SCO2/SFXN1/SFXN3/SLC22A14/SLC25A3/SPIRE1/TIMM17A/TIMM23/TOMM40
## GO:0015399 ABCA1/ABCA2/ABCA3/ABCC5/ABCD4/ATP13A3/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP5F1B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/ATP7B/ATP8A1/COX4I1/COX5A/COX5B/COX6B1/COX7B/CYB561A3/CYB5A/CYBRD1/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/TAP1/TAP2/TAPBP/UQCRC1/UQCRFS1
## GO:0009055 AIFM2/AKR1B1/ALDH2/AOC2/ASPH/COX4I1/COX5A/COX5B/COX6B1/COX7A2/COX7B/CYB5A/CYCS/DMGDH/GLRX2/GSR/MAOB/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PHGDH/QDPR/SDHA/SDHC/SRD5A1/STEAP4/UQCR11/UQCRC1/UQCRFS1
## GO:0015453 COX4I1/COX5A/COX5B/COX6B1/COX7B/CYB561A3/CYB5A/CYBRD1/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/UQCRC1/UQCRFS1
## GO:0016655 AIFM2/AKR1C1/AKR1C2/AKR1C3/CBR1/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0005201 ACAN/AEBP1/AGRN/BGN/CHADL/CILP/COL11A2/COL12A1/COL15A1/COL18A1/COL21A1/COL22A1/COL25A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL7A1/COL8A2/COL9A1/COL9A2/COL9A3/DPT/EFEMP1/FBN1/FBN2/FRAS1/IGFBP7/LAMA2/LAMA3/LAMA4/LAMB1/LAMB3/LAMC1/LAMC2/LTBP1/LUM/MARCOL/MATN2/MFAP5/MFGE8/MMRN2/NID2/PCOLCE/PODN/PXDN/SPON1/SRPX2/TFPI2/TGFBI/THBS2/THBS3/TINAGL1/TNXB/ZP1
## GO:0003954 AIFM1/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0008137 NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0050136 NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0003955 NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0022804 ABCA1/ABCA2/ABCA3/ABCC5/ABCD4/ANKH/ATP13A3/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP5F1B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/ATP7B/ATP8A1/COX4I1/COX5A/COX5B/COX6B1/COX7B/CYB561A3/CYB5A/CYBRD1/LETM1/MFSD12/MFSD2A/MFSD3/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/SLC10A3/SLC11A2/SLC12A2/SLC12A6/SLC15A3/SLC15A4/SLC16A2/SLC16A3/SLC17A7/SLC19A1/SLC1A4/SLC1A5/SLC20A2/SLC24A3/SLC25A11/SLC25A3/SLC25A30/SLC25A5/SLC26A4/SLC2A13/SLC34A3/SLC35A1/SLC35D1/SLC36A4/SLC38A1/SLC38A2/SLC38A4/SLC39A14/SLC39A8/SLC6A6/SLC7A8/SLC8A3/SLC9A3/SLC9A9/SLCO1A2/SLCO2B1/SLCO3A1/TAP1/TAP2/TAPBP/UQCRC1/UQCRFS1
## GO:0004298 PSMA4/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9
## GO:0016651 AIFM1/AIFM2/AIFM3/AKR1C1/AKR1C2/AKR1C3/CBR1/CYB5RL/FMO5/MICAL1/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2
## GO:0015036 ERO1A/GLRX/GLRX2/GLRX3/GSR/GSTO1/NXN/P4HB/PDIA3/PDIA4/PDIA5/PGK1/QSOX1/SCO2/TMX2/TMX3/TXN/TXN2/TXNDC17/TXNL1
## GO:0016667 ERO1A/GLRX/GLRX2/GLRX3/GSR/GSTO1/IFI30/NXN/P4HB/PDIA3/PDIA4/PDIA5/PGK1/PRDX3/QSOX1/SCO2/SESN2/SQOR/TMX2/TMX3/TXN/TXN2/TXNDC17/TXNL1
## GO:0015078 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1H/COX4I1/COX5A/COX5B/COX6B1/COX7B/CYB5A/LETM1/MFSD3/SLC11A2/SLC15A3/SLC15A4/SLC25A3/SLC25A5/SLC2A13/SLC39A8/SLC9A3/SLC9A9/TCIRG1/UQCRC1/UQCRFS1
## GO:0008201 ADAMTS1/ADAMTS15/ADAMTSL5/ANG/CCDC80/CCL7/CCL8/CCN3/CCN4/CCN6/CFH/CLEC3B/COL25A1/CXCL10/CXCL6/CXCL8/ELANE/FBLN7/FBN1/FGF10/FGF7/FGF9/FGFBP1/FGFR2/FSTL1/GPNMB/HDGF/LAMC2/LIPG/MPIG6B/MSTN/NRP2/PCOLCE/PCSK6/PDCD5/PF4/PF4V1/RSPO2/RSPO3/RTN4RL1/SAA1/SERPINE2/SFRP1/SMOC1/SMOC2/THBS2/THBS3/THBS4/TNXB
## GO:0019829 ATP13A3/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP5F1B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1H/ATP7B/ATP8A1
## GO:0015035 ERO1A/GLRX/GLRX2/GLRX3/GSR/NXN/P4HB/PDIA3/PDIA4/PDIA5/PGK1/QSOX1/SCO2/TMX3/TXN/TXN2/TXNDC17
## GO:0070003 GGT1/GGT5/PSMA4/PSMB1/PSMB10/PSMB2/PSMB3/PSMB4/PSMB5/PSMB6/PSMB7/PSMB8/PSMB9
## GO:0030020 COL11A2/COL12A1/COL15A1/COL18A1/COL21A1/COL25A1/COL2A1/COL3A1/COL4A1/COL4A2/COL4A3/COL4A4/COL5A2/COL7A1/COL8A2/COL9A1/COL9A2/COL9A3
## GO:0016853 ALOXE3/DCT/DDT/DDTL/DSE/DSEL/ERP44/FKBP10/FKBP11/FKBP14/FKBP1A/FKBP2/FKBP4/GALM/GLCE/GLRX2/GPI/GSTZ1/HYI/ISYNA1/ITPK1/LSS/MCEE/MIF/NKTR/P4HB/PDIA3/PDIA4/PDIA5/PGAM1/PGAM2/PGM2L1/PPIF/PPIL1/PPIL3/PPWD1/PTGES/PTGES2/PTGIS/QSOX1/TMX3/TOP1/TOP1MT/TPI1
## GO:0046933 ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C
## GO:0005539 ACAN/ADAMTS1/ADAMTS15/ADAMTSL5/AGRN/ANG/BGN/C1QBP/CCDC80/CCL7/CCL8/CCN3/CCN4/CCN6/CFH/CLEC3B/COL25A1/CXCL10/CXCL6/CXCL8/ELANE/EPYC/FBLN7/FBN1/FGF10/FGF7/FGF9/FGFBP1/FGFR2/FSTL1/GNS/GPNMB/HAPLN3/HDGF/HYAL2/LAMC2/LIPG/MPIG6B/MSTN/NOD2/NRP2/PCOLCE/PCSK6/PDCD5/PF4/PF4V1/RSPO2/RSPO3/RTN4RL1/SAA1/SERPINE2/SFRP1/SMOC1/SMOC2/SULF2/THBS2/THBS3/THBS4/TNFAIP6/TNXB
## GO:0016829 ACO1/ACO2/ALDOA/ALOXE3/AMD1/APIP/APMAP/ASL/AZIN1/BCKDHA/CA12/CA2/CA3/CA5B/CA8/CA9/CD38/CLYBL/CSAD/DDT/DDTL/ECHDC1/ECHDC2/ECHS1/ENO1/ENO2/ENO4/FAHD1/FAHD2B/GLO1/GSTM4/GUCY1A1/HCCS/LTC4S/MGST2/NAXD/NEIL1/NPR1/PAICS/PARK7/PCK1/PCK2/PHYKPL/PTGES2/PTGIS/PTS/RNASET2/TKFC/TPI1/UXS1/XRCC5
## GO:0016758 A4GALT/ALG2/ALG3/ALG5/ALG8/ALG9/B3GALT1/B3GALT2/B3GNT2/B3GNT7/B4GALNT1/B4GALNT3/B4GALT1/B4GALT4/B4GALT5/B4GAT1/C1GALT1/C1GALT1C1/C1GALT1C1L/CHPF2/COLGALT2/CSGALNACT1/EXT2/FUT11/GALNT16/GALNT2/GALNT5/GALNT8/GCNT3/GYS1/HAS3/HEXB/LFNG/MFNG/MGAT1/MGAT4A/MGAT5/OGT/OSTC/PIGV/POFUT1/POGLUT1/POGLUT2/POMGNT1/POMT2/RFNG/RPN1/RPN2/STT3B/TMTC3/TYMP
## GO:0042626 ABCA1/ABCA2/ABCA3/ABCC5/ABCD4/ATP13A3/ATP1A1/ATP1A2/ATP1A3/ATP1B1/ATP2A2/ATP2A3/ATP2B3/ATP2B4/ATP5F1B/ATP6V0C/ATP6V0D1/ATP6V0E1/ATP6V1E1/ATP6V1F/ATP6V1G1/ATP6V1G2/ATP6V1H/ATP7B/ATP8A1/TAP1/TAP2/TAPBP
## Count
## GO:0006091 152
## GO:0045333 87
## GO:0015980 108
## GO:0046034 94
## GO:0009060 71
## GO:0006119 57
## GO:0030198 95
## GO:0043062 95
## GO:0045229 95
## GO:0022900 61
## GO:0022904 46
## GO:0042773 39
## GO:0042775 39
## GO:0033108 39
## GO:0019646 36
## GO:0006120 26
## GO:0003018 76
## GO:0032496 90
## GO:0010257 27
## GO:0032981 27
## GO:0006790 91
## GO:0009259 99
## GO:0009117 119
## GO:0009150 95
## GO:0006753 120
## GO:0061448 73
## GO:0006163 100
## GO:0019693 100
## GO:0002237 92
## GO:1903829 110
## GO:0009100 98
## GO:0051223 119
## GO:0062197 87
## GO:0071453 52
## GO:0006090 38
## GO:0044272 48
## GO:0051216 58
## GO:0034976 71
## GO:1903510 33
## GO:1904951 81
## GO:0070482 84
## GO:0072521 102
## GO:0010506 86
## GO:0071496 80
## GO:0072594 103
## GO:0033157 62
## GO:0009101 80
## GO:0016236 78
## GO:0071472 9
## GO:0071384 24
## GO:2001233 90
## GO:0006979 102
## GO:0036293 76
## GO:1901653 88
## GO:0060348 61
## GO:0097191 60
## GO:0001666 73
## GO:0052548 100
## GO:1901652 112
## GO:0036294 45
## GO:0002931 22
## GO:0007249 73
## GO:0071456 43
## GO:1901654 53
## GO:0019751 37
## GO:0046031 31
## GO:0097193 74
## GO:2001236 45
## GO:0055119 11
## GO:1903522 67
## GO:0071549 14
## GO:0030199 24
## GO:0032386 81
## GO:0045862 88
## GO:0032092 29
## GO:0071222 58
## GO:0051881 26
## GO:0051222 73
## GO:1900180 40
## GO:1901617 63
## GO:0071375 73
## GO:1900182 29
## GO:0030203 37
## GO:0006486 59
## GO:0043413 59
## GO:0051767 12
## GO:0051769 12
## GO:0052547 103
## GO:0071385 21
## GO:0045444 61
## GO:0006022 39
## GO:0071219 59
## GO:0070997 83
## GO:0090316 44
## GO:0071621 38
## GO:0006936 82
## GO:0046165 41
## GO:0046173 23
## GO:0043467 39
## GO:0001819 105
## GO:0016241 44
## GO:0055076 40
## GO:0034350 8
## GO:0008637 33
## GO:0051235 78
## GO:0003012 100
## GO:0015986 13
## GO:0071383 53
## GO:1901655 30
## GO:0009135 32
## GO:0009179 32
## GO:0006096 27
## GO:0070085 61
## GO:0045936 98
## GO:0009260 49
## GO:1905952 43
## GO:0042063 70
## GO:0010508 39
## GO:0035966 44
## GO:0009165 63
## GO:0010563 98
## GO:0035296 40
## GO:0097746 40
## GO:0031668 61
## GO:0010498 108
## GO:2001234 58
## GO:0061037 14
## GO:0071548 17
## GO:0006757 27
## GO:0043434 91
## GO:0030595 59
## GO:0035150 40
## GO:0090066 106
## GO:0048545 77
## GO:0046390 50
## GO:0003015 63
## GO:1901293 63
## GO:0060047 61
## GO:0072503 107
## GO:0002062 33
## GO:0006457 54
## GO:0046916 34
## GO:0030593 32
## GO:0016055 99
## GO:0097530 42
## GO:2000116 57
## GO:0007517 77
## GO:0010950 46
## GO:0046513 23
## GO:0006023 26
## GO:0198738 99
## GO:0010038 80
## GO:0009185 33
## GO:0071216 62
## GO:0006024 25
## GO:0071470 16
## GO:0050900 86
## GO:0009152 45
## GO:0001655 80
## GO:1904062 80
## GO:0009612 51
## GO:0030099 87
## GO:0032526 32
## GO:0098657 58
## GO:0006164 49
## GO:0010952 49
## GO:0060485 70
## GO:0001836 20
## GO:0050878 85
## GO:0048705 56
## GO:0072001 72
## GO:0032527 18
## GO:0034764 53
## GO:0048762 59
## GO:0006066 81
## GO:0007033 48
## GO:0010232 27
## GO:0150104 27
## GO:0090257 60
## GO:1904851 7
## GO:0006986 38
## GO:0046661 43
## GO:0042776 10
## GO:0006487 23
## GO:0071260 23
## GO:0010876 96
## GO:0006970 25
## GO:0044106 33
## GO:0006972 12
## GO:0034349 9
## GO:0071474 8
## GO:0009267 42
## GO:0019221 103
## GO:0009308 34
## GO:0009615 86
## GO:0034599 66
## GO:0008016 52
## GO:0008654 61
## GO:0042326 84
## GO:0060349 29
## GO:0070555 38
## GO:0106106 39
## GO:0120161 39
## GO:0006734 13
## GO:0051099 44
## GO:0032331 11
## GO:0034312 11
## GO:0043122 60
## GO:0072522 50
## GO:1905954 28
## GO:0071300 22
## GO:0034612 59
## GO:0043457 18
## GO:1901214 71
## GO:0010001 53
## GO:0006165 29
## GO:0031669 52
## GO:0032368 33
## GO:0006767 21
## GO:1990266 35
## GO:0048872 65
## GO:0051403 58
## GO:1902600 36
## GO:0018126 12
## GO:2001014 10
## GO:0062012 76
## GO:0060326 71
## GO:0046939 29
## GO:0031032 49
## GO:0050920 54
## GO:0006099 13
## GO:0034311 13
## GO:0006576 30
## GO:0006672 30
## GO:1902903 82
## GO:0043270 63
## GO:0048771 44
## GO:0120163 17
## GO:1990845 41
## GO:0031098 59
## GO:0051770 9
## GO:0090075 14
## GO:0051346 81
## GO:0016266 16
## GO:0042401 15
## GO:0031331 95
## GO:0044089 103
## GO:0070203 7
## GO:1904869 7
## GO:1904871 7
## GO:0006596 8
## GO:0030007 8
## GO:0098760 8
## GO:0098761 8
## GO:0045017 59
## GO:0046890 44
## GO:0016311 90
## GO:0032370 22
## GO:0032231 30
## GO:0018208 19
## GO:0051492 27
## GO:0110053 62
## GO:0042060 91
## GO:0045785 94
## GO:0000422 26
## GO:0061726 26
## GO:0070588 70
## GO:0044262 65
## GO:0071731 10
## GO:0009309 15
## GO:0061035 22
## GO:0006839 45
## GO:0010638 101
## GO:0001659 44
## GO:0097529 54
## GO:0045926 57
## GO:0002064 49
## GO:0006754 19
## GO:0038066 19
## GO:0060350 19
## GO:0035107 37
## GO:0035108 37
## GO:0010822 23
## GO:0022411 96
## GO:0032970 84
## GO:0006493 26
## GO:0009199 26
## GO:0043281 49
## GO:0006595 9
## GO:0042339 9
## GO:0034767 41
## GO:0046467 38
## GO:0006874 95
## GO:0032412 60
## GO:0055072 25
## GO:0048538 16
## GO:0021602 12
## GO:0032869 49
## GO:0071559 59
## GO:0055074 97
## GO:0042176 84
## GO:0030178 43
## GO:0043254 85
## GO:0008207 14
## GO:0045454 14
## GO:0098798 108
## GO:0005743 154
## GO:0098800 68
## GO:0000502 37
## GO:1905369 41
## GO:0070469 46
## GO:0005746 43
## GO:0098803 42
## GO:1905368 47
## GO:0005839 17
## GO:0005788 92
## GO:1990204 46
## GO:0005747 26
## GO:0030964 26
## GO:0045271 26
## GO:0019867 72
## GO:0062023 113
## GO:0016469 26
## GO:0031300 109
## GO:0031968 71
## GO:0005741 64
## GO:0005759 117
## GO:0031301 99
## GO:0019774 10
## GO:0005604 35
## GO:0140534 42
## GO:0031228 27
## GO:0022624 14
## GO:0005753 13
## GO:0030173 25
## GO:0045259 13
## GO:0042383 40
## GO:0005838 11
## GO:0015629 110
## GO:1990351 91
## GO:0033177 13
## GO:0042470 33
## GO:0048770 33
## GO:0033176 13
## GO:0005774 99
## GO:0005581 27
## GO:0034774 74
## GO:0005758 26
## GO:0060205 74
## GO:0031970 28
## GO:0045121 74
## GO:0031983 74
## GO:0098857 74
## GO:0001726 45
## GO:0098573 27
## GO:0033178 10
## GO:1904813 34
## GO:0005832 7
## GO:0045277 12
## GO:0005751 11
## GO:0016471 11
## GO:1902495 81
## GO:0098644 10
## GO:0005766 39
## GO:0042582 39
## GO:0000314 11
## GO:0005763 11
## GO:0070069 15
## GO:0005938 68
## GO:0031227 42
## GO:0032592 25
## GO:0015399 61
## GO:0009055 49
## GO:0015453 33
## GO:0016655 28
## GO:0005201 58
## GO:0003954 24
## GO:0008137 23
## GO:0050136 23
## GO:0003955 23
## GO:0022804 103
## GO:0004298 11
## GO:0016651 33
## GO:0015036 20
## GO:0016667 24
## GO:0015078 39
## GO:0008201 49
## GO:0019829 19
## GO:0015035 17
## GO:0070003 13
## GO:0030020 18
## GO:0016853 44
## GO:0046933 10
## GO:0005539 60
## GO:0016829 51
## GO:0016758 51
## GO:0042626 28head(summary(ego))## Warning in summary(ego): summary method to convert the object to data.frame is
## deprecated, please use as.data.frame instead.## ONTOLOGY ID
## GO:0006091 BP GO:0006091
## GO:0045333 BP GO:0045333
## GO:0015980 BP GO:0015980
## GO:0046034 BP GO:0046034
## GO:0009060 BP GO:0009060
## GO:0006119 BP GO:0006119
## Description GeneRatio
## GO:0006091 generation of precursor metabolites and energy 152/2840
## GO:0045333 cellular respiration 87/2840
## GO:0015980 energy derivation by oxidation of organic compounds 108/2840
## GO:0046034 ATP metabolic process 94/2840
## GO:0009060 aerobic respiration 71/2840
## GO:0006119 oxidative phosphorylation 57/2840
## BgRatio pvalue p.adjust qvalue
## GO:0006091 494/18800 3.830606e-19 2.371528e-15 1.894739e-15
## GO:0045333 231/18800 2.702577e-17 8.365827e-14 6.683900e-14
## GO:0015980 321/18800 5.827814e-17 1.202667e-13 9.608737e-14
## GO:0046034 273/18800 1.187700e-15 1.838263e-12 1.468685e-12
## GO:0009060 187/18800 1.400398e-14 1.733972e-11 1.385362e-11
## GO:0006119 139/18800 1.219898e-13 1.258732e-10 1.005667e-10
## geneID
## GO:0006091 ACO1/ACO2/ADPGK/AIFM2/AK4/AKR1B1/ALDH1L2/ALDH2/ALDOA/AOC2/ARL2/ASPH/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5IF1/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/CISD1/COA6/COQ10B/COX17/COX4I1/COX5A/COX5B/COX6C/COX7A2/COX7C/CYB5A/CYCS/DDIT4/DLAT/DMGDH/DNAJC15/DYRK2/ENO1/ENO2/ENO4/GAPDH/GFPT2/GLRX2/GPD2/GPI/GSR/GYS1/HDAC4/HIF1A/HK2/IDH3A/IFNAR1/IFNLR1/IL10RB/IRS1/KHK/LDHA/MAOB/MDH1/MDH1B/MDH2/MRAP2/MTOR/MYBBP1A/NDUFA1/NDUFA13/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOS2/NR1D1/NR4A3/OGT/P2RX7/PARK7/PDHB/PDIA5/PER2/PFKL/PFKP/PGAM1/PGAM2/PGK1/PHGDH/PHKA1/PHKA2/PHKG1/PHKG2/PID1/PKM/PLEC/POLG2/PPIF/PPP1R3B/PPP1R3C/PRDM16/PRKAA2/PRKAG2/PSEN1/QDPR/RHOA/RUBCNL/SCO2/SDHA/SDHAF2/SDHC/SELENOS/SIRT3/SLC25A23/SLC25A25/SLC2A6/SOD2/SRD5A1/STEAP4/SUCLA2/SUCLG2/TALDO1/TIGAR/TPI1/UGP2/UQCC2/UQCR11/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0045333 ACO1/ACO2/AIFM2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/CISD1/COA6/COQ10B/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DLAT/DNAJC15/GPD2/HIF1A/IDH3A/IFNAR1/IFNLR1/IL10RB/MDH1/MDH1B/MDH2/MYBBP1A/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOS2/NR4A3/PARK7/PDHB/PLEC/POLG2/PPIF/PRDM16/RHOA/SCO2/SDHA/SDHAF2/SDHC/SIRT3/SLC25A23/SLC25A25/SOD2/SUCLA2/SUCLG2/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0015980 ACO1/ACO2/AIFM2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/CISD1/COA6/COQ10B/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DLAT/DNAJC15/DYRK2/GFPT2/GPD2/GYS1/HIF1A/IDH3A/IFNAR1/IFNLR1/IL10RB/IRS1/KHK/MDH1/MDH1B/MDH2/MRAP2/MTOR/MYBBP1A/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/NOS2/NR1D1/NR4A3/PARK7/PDHB/PER2/PHKA1/PHKA2/PHKG1/PHKG2/PID1/PLEC/POLG2/PPIF/PPP1R3B/PPP1R3C/PRDM16/PRKAG2/RHOA/RUBCNL/SCO2/SDHA/SDHAF2/SDHC/SELENOS/SIRT3/SLC25A23/SLC25A25/SOD2/SUCLA2/SUCLG2/TIGAR/UGP2/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0046034 ADPGK/AK2/AK4/ALDOA/ARL2/ATP1A2/ATP1B1/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5IF1/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATP6V0C/ATPSCKMT/BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DDIT4/DNAJC15/ENO1/ENO2/ENO4/GAPDH/GPI/HDAC4/HIF1A/HK2/LDHA/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/OGT/OLA1/P2RX7/PARK7/PFKL/PFKP/PGAM1/PGAM2/PGK1/PID1/PKM/PPIF/PRKAA2/PRKAG2/PSEN1/RHOA/SDHA/SDHAF2/SDHC/SLC25A23/SLC25A25/SLC2A6/TIGAR/TPI1/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0009060 ACO1/ACO2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DLAT/DNAJC15/HIF1A/IDH3A/MDH1/MDH1B/MDH2/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/PDHB/PPIF/RHOA/SDHA/SDHAF2/SDHC/SIRT3/SLC25A23/SUCLA2/SUCLG2/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## GO:0006119 AK4/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/CHCHD2/COA6/COX4I1/COX5A/COX5B/COX7A2/COX7C/CYCS/DNAJC15/NDUFA1/NDUFA2/NDUFA3/NDUFA4/NDUFA7/NDUFA8/NDUFA9/NDUFAB1/NDUFAF1/NDUFB1/NDUFB2/NDUFB3/NDUFB4/NDUFB5/NDUFB6/NDUFB8/NDUFB9/NDUFC1/NDUFC2/NDUFS1/NDUFS5/NDUFS6/NDUFS8/NDUFV2/PARK7/PPIF/RHOA/SDHA/SDHAF2/SDHC/SLC25A23/UQCC2/UQCRC1/UQCRFS1/UQCRQ/VCP
## Count
## GO:0006091 152
## GO:0045333 87
## GO:0015980 108
## GO:0046034 94
## GO:0009060 71
## GO:0006119 57dotplot(ego,x="GeneRatio",showCategory=20,font.size=6)
#dotplot(ego3,x="GeneRatio",showCategory=20,font.size=6)ego## #
## # over-representation test
## #
## #...@organism Homo sapiens
## #...@ontology GOALL
## #...@keytype ENTREZID
## #...@gene chr [1:3117] "53947" "51166" "79719" "16" "19" "20" "21" "10057" "5826" ...
## #...pvalues adjusted by 'BH' with cutoff <0.05
## #...397 enriched terms found
## 'data.frame': 397 obs. of 10 variables:
## $ ONTOLOGY : chr "BP" "BP" "BP" "BP" ...
## $ ID : chr "GO:0006091" "GO:0045333" "GO:0015980" "GO:0046034" ...
## $ Description: chr "generation of precursor metabolites and energy" "cellular respiration" "energy derivation by oxidation of organic compounds" "ATP metabolic process" ...
## $ GeneRatio : chr "152/2840" "87/2840" "108/2840" "94/2840" ...
## $ BgRatio : chr "494/18800" "231/18800" "321/18800" "273/18800" ...
## $ pvalue : num 3.83e-19 2.70e-17 5.83e-17 1.19e-15 1.40e-14 ...
## $ p.adjust : num 2.37e-15 8.37e-14 1.20e-13 1.84e-12 1.73e-11 ...
## $ qvalue : num 1.89e-15 6.68e-14 9.61e-14 1.47e-12 1.39e-11 ...
## $ geneID : chr "ACO1/ACO2/ADPGK/AIFM2/AK4/AKR1B1/ALDH1L2/ALDH2/ALDOA/AOC2/ARL2/ASPH/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5IF1/ATP"| __truncated__ "ACO1/ACO2/AIFM2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/"| __truncated__ "ACO1/ACO2/AIFM2/AK4/ARL2/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5ME/ATP5MF/ATP5MG/ATP5PD/ATP5PF/ATPSCKMT/BID/BNIP3/"| __truncated__ "ADPGK/AK2/AK4/ALDOA/ARL2/ATP1A2/ATP1B1/ATP5F1A/ATP5F1B/ATP5F1C/ATP5F1E/ATP5IF1/ATP5MC1/ATP5MC3/ATP5ME/ATP5MF/AT"| __truncated__ ...
## $ Count : int 152 87 108 94 71 57 95 95 95 61 ...
## #...Citation
## T Wu, E Hu, S Xu, M Chen, P Guo, Z Dai, T Feng, L Zhou, W Tang, L Zhan, X Fu, S Liu, X Bo, and G Yu.
## clusterProfiler 4.0: A universal enrichment tool for interpreting omics data.
## The Innovation. 2021, 2(3):100141Category Plot
subset <- ego[ego$Count==152, asis=TRUE]
gen<-ego[ego$Count==152, asis=TRUE]
#sub<- subset.data.frame(ego,Count=5)
#cnetplot(sub,showCategory=5)
cnetplot(gen,layout="gem", cex_category=2,cex_gene=2,cex_label_category=1,foldChange=geneList)## Scale for size is already present.
## Adding another scale for size, which will replace the existing scale.## Warning: ggrepel: 51 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
cnetplot(subset, layout="gem", cex_category=2,cex_gene=2,cex_label_category=1,foldChange=geneList)## Scale for size is already present.
## Adding another scale for size, which will replace the existing scale.## Warning: ggrepel: 52 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
Enrichment plots
I will show you can example of a pathway enriched in our lung samples, and a pathway that is enriched in Control (i.e negative NES score)
filtered_pathway <- subset(fgsea, NES > 2.3)
filt_p <- as.vector(filtered_pathway$pathway)
for (i in filt_p){
plt <- plotEnrichment(pathway = pathway[[i]],
gseaParam = 1, ticksSize = 0.5, stats= rank) +
labs(title=i) + theme(plot.title = element_text(hjust = 0.5, face="bold"))
print(plt)
}
heatmap genes in GOBP NEUTROPHIL … (Trail Trail)
go_bp_neutrophil_genes = subset(fgsea, fgsea$pathway=="GOBP_NEUTROPHIL_CHEMOTAXIS")
go_bp_neutrophil_genes = unlist(go_bp_neutrophil_genes$leadingEdge)
subset <- rld[go_bp_neutrophil_genes, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c( "forestgreen","blue")
names(col) <- c("Healthy_cytokine", "Healthy_control")
ann_col <- list(Condition = col)
#pheatmap(t(mat),
#show_rownames = TRUE,
#annotation_col = ann,
#annotation_colors = ann_col,
#main = "GOBP_NEUTROPHIL_CHEMOTAXIS",
#labels_row = rownames(subset), # figure out remove row labels
#fontsize_row = 6,
#color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "GOBP_NEUTROPHIL_CHEMOTAXIS",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
Trial Trial
go_bp_neutrophil_migration = subset(fgsea, fgsea$pathway=="GOBP_NEUTROPHIL_MIGRATION")
go_bp_neutrophil_migration = unlist(go_bp_neutrophil_migration$leadingEdge)
subset <- rld[go_bp_neutrophil_migration, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c( "forestgreen","blue")
names(col) <- c("Healthy_cytokine", "Healthy_control")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "GOBP_NEUTROPHIL_MIGRATION",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "GOBP_NEUTROPHIL_MIGRATION",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
KEGG Pathway
# read in gmt file
pathway_kegg <- gmtPathways("/Users/aungphyo/Downloads/c2.cp.kegg.v2023.1.Hs.symbols.gmt.txt")
head(pathway_kegg, 1)## $KEGG_N_GLYCAN_BIOSYNTHESIS
## [1] "ALG13" "DOLPP1" "RPN1" "ALG14" "MAN1B1" "ALG3" "B4GALT1"
## [8] "MGAT5" "RPN2" "STT3A" "MGAT3" "DAD1" "MGAT2" "ALG12"
## [15] "TUSC3" "MAN1C1" "DPM2" "DPM1" "GANAB" "ALG1" "MGAT4A"
## [22] "ALG10B" "STT3B" "MAN1A2" "ALG10" "ALG11" "ALG8" "ALG2"
## [29] "DPAGT1" "RFT1" "DPM3" "DDOST" "MGAT4B" "ALG6" "MAN2A2"
## [36] "MAN1A1" "MAN2A1" "ST6GAL1" "B4GALT3" "ALG5" "B4GALT2" "MGAT5B"
## [43] "ALG9" "MOGS" "FUT8" "MGAT1"## convert result object to dataframe
res <- as.data.frame(res1)
res$hgnc_symbol <- rownames(res)
# compute summary stat
fgsea_rank <- res %>%
dplyr::select(hgnc_symbol, log2FoldChange) %>%
na.omit() %>%
distinct() %>%
group_by(hgnc_symbol) %>%
summarize(log2foldchange=mean(log2FoldChange))
fgsea_rank## # A tibble: 16,478 × 2
## hgnc_symbol log2foldchange
## <chr> <dbl>
## 1 "" -0.0811
## 2 "A1BG" 0.178
## 3 "A1CF" 0.807
## 4 "A2M" 0.690
## 5 "A2ML1" -0.669
## 6 "A2MP1" 0.232
## 7 "A4GALT" 0.921
## 8 "A4GNT" -0.651
## 9 "AAAS" -0.282
## 10 "AACS" 0.124
## # ℹ 16,468 more rowscreate named list
rank <- deframe(fgsea_rank)
head(rank, 20)## A1BG A1CF A2M A2ML1 A2MP1
## -0.08106658 0.17779131 0.80699938 0.69022080 -0.66934621 0.23223054
## A4GALT A4GNT AAAS AACS AADAT AAGAB
## 0.92105758 -0.65100877 -0.28201115 0.12395885 -0.68486107 0.36251058
## AAK1 AAMDC AAMP AANAT AAR2 AARD
## 0.06013558 -0.29388262 0.10425325 0.16858497 0.05793644 0.77611830
## AARS1 AARS2
## -0.66925235 0.04273303# run fgsea
fgsea_kegg <- fgsea(pathways=pathway_kegg, stats=rank, nperm=1000)
fgseaResTidy_kegg <- fgsea_kegg %>%
as_tibble() %>%
arrange(desc(NES))
# Show in a nice table:
fgseaResTidy_kegg %>%
dplyr::select(-leadingEdge, -ES, -nMoreExtreme) %>%
arrange(padj) %>%
DT::datatable()Cluster Profiler of KEGG Analysis
df <- as.data.frame(res1)
df$hgnc_symbol <- rownames(df)
info <- getBM(attributes=c("hgnc_symbol",
"entrezgene_id"),
filters = c("hgnc_symbol"),
values = df$hgnc_symbol,
mart = mart,
useCache=FALSE)
tmp <- merge(df, info, by="hgnc_symbol")
# subset the dataframe to include only stat sig genes
tmp <- tmp[tmp$padj < 0.05,]OrgDb <- org.Hs.eg.db
geneList <- as.vector(tmp$log2FoldChange)
names(geneList) <- as.character(tmp$entrezgene_id)
gene <- na.omit(as.character(tmp$entrezgene_id))
gene_list<-sort(geneList,decreasing = TRUE)
gene_list## 6372 6374 3576 84419 3569 105378220 3791
## 11.3322852 10.5889919 10.3238743 10.0963987 9.3848862 9.3296122 9.0184181
## 2921 1440 1437 4321 5617 388125 2919
## 8.7271651 8.6261102 8.5513923 8.5204213 8.4051571 8.1954232 8.1130549
## 4314 1591 404203 6781 3627 2920 2162
## 8.0982838 8.0938212 7.8361456 7.7369169 7.4591768 7.0021936 6.9134641
## 83953 6364 4843 3934 3290 6750 440822
## 6.8709266 6.7990105 6.5621121 6.5347256 6.4864122 6.4816071 6.4510365
## 6355 169044 100288077 1910 54210 116372 84870
## 6.3897545 6.3246536 6.2733515 6.0941413 6.0528831 6.0368572 5.9920158
## 597 5266 6356 56265 4312 4319 1618
## 5.9566646 5.9114700 5.9100328 5.8557603 5.7857088 5.7080011 5.6116183
## 25884 2706 26298 6348 5197 4495 6943
## 5.5273737 5.5165452 5.4802298 5.4679687 5.3995657 5.3445528 5.2017422
## 5105 3055 5743 1999 6347 2675 6401
## 5.1978269 5.1810093 5.1177493 5.0960788 4.9730456 4.9084552 4.9022804
## 6547 54972 7130 7980 6289 8740 6354
## 4.8464846 4.7225141 4.6939459 4.5768761 4.4773059 4.4741446 4.4142540
## 768 22917 3589 80319 91584 153218 3294
## 4.3353112 4.3249605 4.2729790 4.2532467 4.2518811 4.2257611 4.2157939
## 943 6648 629 718 1520 <NA> 3242
## 4.1646830 4.1482264 4.1244039 4.0437587 3.9508458 3.9361832 3.8602813
## 338440 9283 50486 10846 90632 64116 11309
## 3.8022648 3.7939711 3.7848556 3.7524333 3.7524333 3.6903125 3.6653533
## 6579 145741 221687 627 9982 5196 3641
## 3.6501659 3.6454723 3.6012639 3.5963535 3.5653122 3.5553244 3.5466855
## 64093 6330 10158 91768 8013 8875 2153
## 3.4989874 3.4928756 3.4925996 3.4476461 3.4450963 3.4429196 3.4386832
## 100132565 80149 3081 5142 1645 5452 7434
## 3.4325161 3.4230267 3.3982491 3.3962489 3.3361373 3.3191197 3.3003175
## 6751 6352 90226 1286 2255 9023 6542
## 3.2816402 3.2630191 3.2594467 3.2445398 3.2301619 3.2089920 3.2058949
## 650 6288 90865 55350 54360 684 9308
## 3.1883131 3.1575477 3.1551867 3.1330152 3.1188584 3.1162908 3.0980438
## 57795 5742 3976 5997 3038 2643 283455
## 3.0894214 3.0579256 3.0468740 3.0372230 3.0202993 3.0139610 2.9958830
## 259307 9568 9630 3759 114897 11197 64127
## 2.9796812 2.9772037 2.9525460 2.9341891 2.9238018 2.9231634 2.9090356
## 51561 8876 51655 150094 238 <NA> 29774
## 2.8620031 2.8579235 2.8536342 2.8504449 2.8459515 2.8436717 2.8436717
## 3429 7128 2537 11259 8870 8942 4494
## 2.8383732 2.8337891 2.8219624 2.8123461 2.7949213 2.7924299 2.7899958
## 174 135 3604 79895 10371 5069 8743
## 2.7827315 2.7820393 2.7753089 2.7710264 2.7636747 2.7631249 2.7406373
## 5874 1646 283768 83401 112399 27076 6096
## 2.7301275 2.7124329 2.7112901 2.6639096 2.6622240 2.6557425 2.6511791
## 387758 231 283208 84665 4929 9340 10135
## 2.6425428 2.6422161 2.6081720 2.6031330 2.5918390 2.5756615 2.5544253
## 9076 1827 10964 58538 27286 5166 27147
## 2.5541127 2.5388659 2.5291294 2.5251623 2.5198552 2.5172166 2.5097798
## 4502 9536 7133 5144 2201 7127 55118
## 2.5093024 2.5029954 2.5028246 2.5000655 2.4903381 2.4875910 2.4851455
## 64332 79772 375567 3965 92737 19 1435
## 2.4811601 2.4748258 2.4737595 2.4687556 2.4609747 2.4517134 2.4433189
## 1294 164781 3575 4501 102725072 80852 3929
## 2.4324068 2.4251400 2.4116020 2.4073919 2.3977998 2.3949919 2.3892795
## <NA> 220441 7482 <NA> 952 2239 <NA>
## 2.3794832 2.3710273 2.3567491 2.3391900 2.3317742 2.3073166 2.3059965
## 2152 6422 23516 132332 54674 5270 5734
## 2.3045770 2.2908049 2.2900139 2.2876031 2.2781503 2.2769559 2.2725327
## 1604 84251 4792 219527 <NA> 1285 342897
## 2.2718304 2.2683166 2.2660813 2.2635305 2.2470965 2.2469415 2.2384750
## 55273 11320 5352 3383 29126 10538 29992
## 2.2376300 2.2245281 2.2014496 2.2008800 2.1940845 2.1916785 2.1895386
## 273 84935 760 3656 <NA> 55022 55790
## 2.1864907 2.1861504 2.1824864 2.1699845 2.1685060 2.1573938 2.1408918
## 6659 654 8638 3914 5327 10100 26018
## 2.1332042 2.1279853 2.1272125 2.1255749 2.1241631 2.1219058 2.1135703
## 7037 80781 1117 7045 22795 771 7803
## 2.1119885 2.1093371 2.1093205 2.1023253 2.1003911 2.0947372 2.0912521
## 116843 4121 80704 147495 3600 11174 5971
## 2.0621979 2.0564523 2.0504095 2.0462249 2.0419582 2.0368682 2.0367339
## 637 3918 23551 2256 4129 80036 81788
## 2.0314521 2.0294376 2.0257341 2.0244185 2.0241586 2.0196353 2.0189946
## 9732 2118 5806 7043 56649 27233 152007
## 2.0169718 2.0156333 2.0148118 2.0132452 2.0029384 1.9948259 1.9855690
## 6689 79853 58189 80380 <NA> 79056 26872
## 1.9823669 1.9775407 1.9713515 1.9659428 1.9606296 1.9510382 1.9436903
## 2791 387763 330 4791 4128 6303 56243
## 1.9404240 1.9390971 1.9367922 1.9317821 1.9087179 1.9038197 1.9036220
## 55332 3574 65108 9890 22822 83648 7474
## 1.8990243 1.8939961 1.8868972 1.8821501 1.8791618 1.8736684 1.8668802
## 6590 23308 102723996 5210 3855 57419 56624
## 1.8612835 1.8492005 1.8492005 1.8475002 1.8438879 1.8389378 1.8266831
## 8622 56548 10863 2710 5321 4891 8362
## 1.8148164 1.8033722 1.7941307 1.7939779 1.7864193 1.7860286 1.7851150
## 554313 51537 4973 284 7857 7035 1906
## 1.7851150 1.7843375 1.7837884 1.7831801 1.7792871 1.7776906 1.7690311
## 374286 4493 <NA> 3624 90293 1909 1030
## 1.7659786 1.7614686 1.7597638 1.7579487 1.7557427 1.7541886 1.7526451
## 83641 8644 3487 57132 8862 687 9420
## 1.7440519 1.7397855 1.7373912 1.7369081 1.7344549 1.7290918 1.7203860
## 100507421 10418 8828 2034 4052 3601 9759
## 1.7182424 1.7172623 1.7107623 1.6964069 1.6935622 1.6922588 1.6853861
## 100093631 4824 2678 1282 347148 54898 8869
## 1.6754818 1.6681137 1.6675961 1.6667105 1.6661434 1.6636443 1.6631794
## 3887 2687 2202 65249 9388 84951 2294
## 1.6592847 1.6546677 1.6531009 1.6497228 1.6460622 1.6457923 1.6355201
## 51286 51129 283209 767 <NA> 27242 388630
## 1.6287234 1.6280404 1.6240743 1.6170934 1.6149582 1.6140605 1.6116720
## 723790 <NA> 171546 9123 1236 54757 27115
## 1.6102223 1.6045521 1.5984626 1.5945833 1.5944411 1.5943513 1.5866145
## 8838 55959 1004 340152 55092 9201 <NA>
## 1.5848266 1.5825527 1.5822057 1.5795901 1.5787461 1.5753268 1.5734459
## 5768 734 6513 57559 25987 9589 133
## 1.5623333 1.5594443 1.5552638 1.5530608 1.5457205 1.5421650 1.5342329
## 197021 9510 84879 1675 7804 84466 54498
## 1.5336724 1.5315296 1.5275744 1.5223747 1.5208158 1.5094201 1.5087733
## 9052 57561 390 3910 10090 48 1281
## 1.5026325 1.5020191 1.4961536 1.4913986 1.4895352 1.4863075 1.4860208
## 5737 3728 3939 23710 6533 80824 387914
## 1.4840433 1.4830187 1.4723738 1.4708070 1.4705807 1.4650469 1.4604790
## 4045 85027 10200 2863 2252 23286 6558
## 1.4595127 1.4579300 1.4528814 1.4506354 1.4362804 1.4339592 1.4327173
## 10105 9542 8767 23704 441024 55686 5163
## 1.4324646 1.4317365 1.4314555 1.4283351 1.4281651 1.4237100 1.4221341
## 63027 4163 4982 56947 8349 4254 79845
## 1.4134843 1.4130581 1.4125795 1.4075133 1.4058427 1.4043247 1.3981577
## 5865 4729 2621 85450 4837 3732 4282
## 1.3978296 1.3903504 1.3877515 1.3874222 1.3846137 1.3798036 1.3760380
## 79899 11228 388722 26207 3176 118611 94240
## 1.3756593 1.3692588 1.3675697 1.3654297 1.3424612 1.3395798 1.3384025
## 220164 5214 80206 1846 5230 3075 26064
## 1.3346404 1.3320601 1.3319719 1.3281052 1.3280071 1.3269416 1.3223201
## 84915 1284 2182 10560 7274 64108 6482
## 1.3206208 1.3193615 1.3175591 1.3132643 1.3127520 1.3062249 1.3040376
## 399694 2048 3667 55351 84952 7167 220108
## 1.2968433 1.2929104 1.2854164 1.2834862 1.2793142 1.2743507 1.2698969
## 256227 401312 57724 92126 2495 8710 1843
## 1.2674479 1.2674479 1.2647247 1.2623618 1.2604675 1.2580868 1.2495288
## 23002 83478 10409 9636 10318 9590 664
## 1.2449698 1.2449071 1.2412186 1.2341711 1.2291271 1.2280323 1.2265814
## 4938 144811 8503 1820 11200 6775 55274
## 1.2212766 1.2155913 1.2154699 1.2152698 1.2129297 1.2102059 1.2091983
## 92610 25 6327 83938 1890 54873 10758
## 1.2072612 1.2042242 1.2039787 1.2034635 1.1912914 1.1892279 1.1881517
## 272 23670 387522 8793 8744 2869 26091
## 1.1878053 1.1862295 1.1856482 1.1848819 1.1790470 1.1790204 1.1779415
## 135112 1000 23764 5687 221468 149840 9180
## 1.1723648 1.1689135 1.1669461 1.1626076 1.1577177 1.1570879 1.1542988
## 116238 255738 55366 1903 11040 8844 140609
## 1.1540234 1.1532698 1.1481708 1.1479246 1.1474036 1.1444740 1.1441251
## 63876 404550 6692 80790 1847 28962 1991
## 1.1433133 1.1412526 1.1411834 1.1382891 1.1355747 1.1307295 1.1289677
## 6573 10125 6772 2590 5445 55640 126969
## 1.1270542 1.1249563 1.1193473 1.1161493 1.1153853 1.1137732 1.1115474
## 57484 5337 3801 5721 <NA> 2597 23531
## 1.1001710 1.0912916 1.0904274 1.0903880 1.0870239 1.0862643 1.0810351
## 2633 57552 57718 5563 58472 4794 11118
## 1.0791153 1.0749112 1.0741555 1.0707376 1.0688687 1.0686707 1.0683455
## 255231 110599564 3006 4217 2026 153830 5223
## 1.0681683 1.0667709 1.0650791 1.0639852 1.0616831 1.0575984 1.0558748
## 84957 2745 147015 64859 5293 84230 728819
## 1.0548470 1.0499428 1.0458352 1.0449780 1.0448701 1.0434347 1.0423299
## 8614 169200 2619 60370 57103 114907 5805
## 1.0416618 1.0416538 1.0413061 1.0395105 1.0382544 1.0376682 1.0368838
## 84623 3091 8553 9945 347733 57026 29923
## 1.0346820 1.0337769 1.0337596 1.0322228 1.0314318 1.0270230 1.0242083
## 602 219 54205 9141 5091 6095 <NA>
## 1.0227577 1.0191876 1.0141319 1.0131400 1.0121211 1.0091311 1.0083718
## 4257 90362 55848 55858 60312 7378 115273
## 1.0034637 1.0029912 1.0001550 0.9980961 0.9972798 0.9956975 0.9919330
## 91614 10962 5828 54495 1805 57591 1051
## 0.9890222 0.9871953 0.9865572 0.9861347 0.9850396 0.9846302 0.9829811
## 9394 1503 2683 226 5507 1513 9056
## 0.9777741 0.9771920 0.9727527 0.9725197 0.9715234 0.9696171 0.9693096
## 92565 10437 83874 7088 51015 23432 90874
## 0.9688442 0.9686821 0.9666586 0.9664371 0.9622668 0.9621481 0.9618497
## 7050 2821 51099 6617 649 716 115361
## 0.9611807 0.9599547 0.9583135 0.9582737 0.9558181 0.9557047 0.9481687
## 79135 4249 4830 5125 10063 5791 64420
## 0.9444318 0.9433509 0.9405312 0.9403876 0.9383455 0.9371124 0.9337726
## <NA> 53373 54541 84695 5033 23158 65062
## 0.9327869 0.9319708 0.9300922 0.9294691 0.9294613 0.9275247 0.9271610
## 7046 715 53947 5604 6884 5128 54897
## 0.9237624 0.9217967 0.9210576 0.9199369 0.9162246 0.9107998 0.9084229
## 2997 11227 23604 573 55314 5738 3672
## 0.9074359 0.9071261 0.9062478 0.9057783 0.9029995 0.9026483 0.9008954
## 10626 898 54502 9955 153769 374882 <NA>
## 0.8990957 0.8984041 0.8981790 0.8974274 0.8969908 0.8965870 0.8962913
## 2697 345757 2770 55248 2534 6567 23529
## 0.8957626 0.8912067 0.8899164 0.8894040 0.8874222 0.8872760 0.8840192
## 64359 2717 29103 896 3105 586 8407
## 0.8838166 0.8808455 0.8799451 0.8789563 0.8785815 0.8763523 0.8758880
## 30001 3097 7837 3017 205 3399 5519
## 0.8754573 0.8753097 0.8743873 0.8684122 0.8681760 0.8673262 0.8650464
## 85441 375790 516 64778 23136 54566 567
## 0.8641717 0.8638651 0.8626703 0.8619314 0.8599478 0.8583834 0.8574400
## 444 25945 6641 1263 85464 3490 3099
## 0.8548925 0.8548481 0.8531138 0.8526289 0.8504713 0.8471220 0.8465139
## 80723 8463 2644 26355 481 56937 217
## 0.8461682 0.8461562 0.8441329 0.8428476 0.8422648 0.8417471 0.8414897
## 64951 1326 140885 57085 64651 124935 1052
## 0.8406767 0.8402766 0.8381766 0.8375952 0.8353920 0.8331214 0.8315714
## 25850 25841 1662 10678 6892 3912 23406
## 0.8278220 0.8260184 0.8246940 0.8246398 0.8243235 0.8238489 0.8221168
## 84937 4883 387521 169792 11182 6891 27122
## 0.8206232 0.8191299 0.8177965 0.8177714 0.8164435 0.8149869 0.8149316
## 57106 2774 533 4793 9572 23550 1349
## 0.8100798 0.8048066 0.8043596 0.8037636 0.8009981 0.7988297 0.7974690
## 775 100874369 51141 653583 11247 10452 10950
## 0.7961606 0.7961606 0.7961354 0.7950551 0.7941518 0.7935707 0.7898079
## 57099 5955 5993 55766 768211 4155 10632
## 0.7897117 0.7878394 0.7863121 0.7851100 0.7832244 0.7802787 0.7800892
## 84940 483 11030 388962 136 653308 58476
## 0.7795785 0.7787263 0.7739462 0.7729190 0.7699651 0.7683068 0.7665214
## 493856 6888 84300 120103 57222 10272 3052
## 0.7630854 0.7622574 0.7618316 0.7617046 0.7593177 0.7580779 0.7571075
## 4047 79888 8795 266812 3455 8848 6319
## 0.7557889 0.7552539 0.7545885 0.7541296 0.7541287 0.7536711 0.7528341
## 64928 23480 4709 5699 4790 8702 6515
## 0.7493184 0.7488785 0.7485480 0.7483724 0.7479659 0.7459784 0.7456293
## 5351 57537 9562 355 56913 2200 10588
## 0.7448787 0.7441715 0.7438667 0.7433445 0.7429267 0.7427118 0.7411545
## 2737 152100 4071 1347 4814 4651 79642
## 0.7399527 0.7395517 0.7388898 0.7388643 0.7376198 0.7339882 0.7325826
## 83930 7436 55164 84168 5393 5905 8692
## 0.7319183 0.7317795 0.7278133 0.7276034 0.7272847 0.7255195 0.7251378
## 7584 51296 3482 518 50640 2820 375449
## 0.7234580 0.7229554 0.7227101 0.7207201 0.7205880 0.7186385 0.7170495
## 7295 11057 1845 80142 623 57213 5606
## 0.7121677 0.7111608 0.7110419 0.7108439 0.7107934 0.7105530 0.7080622
## 5211 11120 55008 1465 7168 677 2519
## 0.7069136 0.7065547 0.7056446 0.7019107 0.7016020 0.7015881 0.7007240
## 5315 27249 55831 3267 63875 10061 3336
## 0.6994971 0.6993260 0.6978760 0.6968726 0.6965350 0.6958194 0.6943765
## 404093 7975 3028 81671 64782 153339 1290
## 0.6942555 0.6941285 0.6939515 0.6939447 0.6927426 0.6926657 0.6925629
## 60493 51422 160857 23235 51726 53 729438
## 0.6909669 0.6895946 0.6888510 0.6883285 0.6878859 0.6871484 0.6869233
## 56477 140606 548645 27235 23446 283820 102723728
## 0.6863983 0.6861831 0.6848175 0.6845292 0.6840745 0.6833388 0.6833388
## 56851 9060 285761 84284 4125 65991 1112
## 0.6828640 0.6815931 0.6812569 0.6782428 0.6781873 0.6774812 0.6771476
## 10476 55295 55969 27090 440574 57089 388650
## 0.6768052 0.6767648 0.6765092 0.6761837 0.6759230 0.6752537 0.6748514
## 170384 83440 8837 23541 11157 56895 6764
## 0.6735407 0.6721866 0.6715911 0.6705073 0.6704444 0.6676869 0.6675313
## 139735 26035 84627 7416 10186 3459 55917
## 0.6668724 0.6667655 0.6665325 0.6659282 0.6657394 0.6654487 0.6644620
## 1390 85465 6890 55501 79680 122416 29095
## 0.6630633 0.6628314 0.6625659 0.6617689 0.6602219 0.6596289 0.6590899
## 27089 55754 24145 79796 55033 11167 6182
## 0.6584924 0.6576149 0.6574109 0.6567372 0.6561774 0.6556135 0.6530137
## 91750 3145 83937 81533 100293516 7873 8934
## 0.6522633 0.6511688 0.6510102 0.6506985 0.6499770 0.6489446 0.6479863
## 79016 51400 7186 56180 4707 57134 80219
## 0.6468475 0.6468374 0.6467965 0.6467919 0.6461122 0.6455590 0.6444532
## 54814 51728 84876 26521 10471 375346 9131
## 0.6440915 0.6436581 0.6436451 0.6430927 0.6428118 0.6412366 0.6401704
## 23412 100526842 166815 79647 56942 58515 10957
## 0.6400363 0.6388990 0.6386573 0.6386081 0.6380095 0.6379507 0.6362425
## 705 11275 1718 7064 5587 54583 100131801
## 0.6353078 0.6346742 0.6345085 0.6343709 0.6334591 0.6330489 0.6326444
## 1973 5638 5698 552900 10970 55137 51303
## 0.6316575 0.6293616 0.6286575 0.6279692 0.6270531 0.6261793 0.6258914
## 2023 9600 7511 51651 55188 56650 29100
## 0.6257159 0.6248648 0.6247700 0.6245997 0.6245928 0.6238530 0.6230613
## 64854 10542 85015 1454 159195 10213 4637
## 0.6223419 0.6222458 0.6220202 0.6209925 0.6209361 0.6201361 0.6200942
## 64768 3460 64065 84817 7386 10011 1528
## 0.6175898 0.6158552 0.6158231 0.6152531 0.6150388 0.6146626 0.6132777
## 285368 4728 23258 79693 8402 166647 54928
## 0.6128131 0.6127293 0.6122664 0.6119835 0.6112575 0.6106291 0.6104851
## 114789 10525 81552 55905 90627 50808 126321
## 0.6101448 0.6100255 0.6099966 0.6099711 0.6080918 0.6066748 0.6052521
## 57154 81603 79139 6499 7187 7001 253461
## 0.6033936 0.6030303 0.6019621 0.6014824 0.6013756 0.6010787 0.6001307
## 7371 10681 56902 56951 80301 647087 5245
## 0.5993688 0.5992946 0.5992867 0.5989692 0.5984466 0.5980764 0.5979784
## 160518 51184 5795 55362 10553 253430 28985
## 0.5977376 0.5964412 0.5954499 0.5950255 0.5950133 0.5945713 0.5933431
## 84153 10385 56342 84987 94081 6925 150274
## 0.5924294 0.5922580 0.5917103 0.5912987 0.5910887 0.5908536 0.5895714
## 84883 25946 5819 114134 26517 84340 79109
## 0.5891724 0.5885944 0.5866007 0.5856401 0.5855408 0.5845668 0.5837672
## 56926 8543 54741 27 55210 5872 5202
## 0.5837400 0.5831436 0.5828817 0.5827801 0.5813582 0.5811642 0.5809034
## 3659 10195 47 85363 9654 57136 25994
## 0.5805598 0.5794566 0.5794139 0.5789484 0.5788656 0.5781753 0.5777173
## 64983 388753 84833 55312 11346 4696 950
## 0.5776701 0.5776415 0.5775846 0.5773408 0.5770953 0.5764207 0.5762340
## 107282092 10123 401505 64718 23780 84668 59286
## 0.5761257 0.5761156 0.5757391 0.5755073 0.5752557 0.5749503 0.5735913
## 9486 506 5720 9351 4695 51371 2021
## 0.5725779 0.5715088 0.5714641 0.5713777 0.5704948 0.5698803 0.5695908
## 24139 7353 8774 6185 29071 64981 55916
## 0.5688316 0.5684075 0.5676661 0.5671811 0.5665638 0.5664300 0.5661543
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## -1.8360451 -1.8382698 -1.8387629 -1.8422857 -1.8441639 -1.8448640 -1.8450596
## 2308 2303 7078 22801 7253 80739 84417
## -1.8473320 -1.8478190 -1.8570474 -1.8581151 -1.8590081 -1.8590395 -1.8630247
## 7164 9717 4147 57124 9719 8708 6665
## -1.8657066 -1.8677428 -1.8678856 -1.8682604 -1.8688000 -1.8759266 -1.8761851
## 5608 4544 165679 9760 27129 196410 645811
## -1.8795244 -1.8818394 -1.8978820 -1.8988388 -1.9003767 -1.9017850 -1.9051505
## 27345 143686 23037 222643 2306 57761 421
## -1.9085514 -1.9213151 -1.9403513 -1.9433499 -1.9497702 -1.9550880 -1.9615210
## 4208 9452 11219 29125 116443 127579 643008
## -1.9664904 -1.9671452 -1.9684546 -1.9688662 -1.9710908 -1.9755544 -1.9773363
## 4058 2170 4884 9472 1833 219623 <NA>
## -1.9830961 -1.9854941 -1.9864604 -1.9885190 -1.9899481 -1.9924410 -1.9970736
## 92749 1306 56256 112476 221002 148252 4212
## -1.9985270 -1.9997547 -2.0060164 -2.0272274 -2.0380303 -2.0380644 -2.0525852
## 5172 138715 8515 114899 5630 375775 7805
## -2.0604991 -2.0660913 -2.0663195 -2.0737630 -2.0743928 -2.0917355 -2.0922100
## 4885 646962 259236 161497 83481 2354 1397
## -2.0981090 -2.0996667 -2.1026073 -2.1171671 -2.1211637 -2.1278590 -2.1344619
## 11341 6493 10156 29995 117144 7125 56963
## -2.1371645 -2.1481464 -2.1521269 -2.1578891 -2.1598431 -2.1600480 -2.1610010
## 116496 1016 10156 100271927 4223 7123 23150
## -2.1673489 -2.1745305 -2.1800436 -2.1800436 -2.1867582 -2.1892658 -2.1924864
## <NA> 29933 202500 1638 53616 7056 126393
## -2.2024785 -2.2042826 -2.2080599 -2.2166274 -2.2176905 -2.2193157 -2.2270480
## 5178 221481 4861 3699 5915 4902 10110
## -2.2324570 -2.2369542 -2.2413953 -2.2443793 -2.2561434 -2.2576210 -2.2638349
## 3739 8639 93010 <NA> 51332 10699 57188
## -2.2743714 -2.2780818 -2.2787186 -2.2897756 -2.2915045 -2.3008411 -2.3030014
## 9496 255239 79589 170689 497190 124907805 51760
## -2.3100319 -2.3310076 -2.3360310 -2.3385297 -2.3559129 -2.3559129 -2.3630816
## 55089 360 635 30820 7134 85439 5334
## -2.3816312 -2.3825410 -2.3872175 -2.3914169 -2.3954715 -2.4133920 -2.4161040
## <NA> 27092 57699 144347 100533183 5420 1382
## -2.4267557 -2.4362621 -2.4367480 -2.4392801 -2.4392801 -2.4450343 -2.4747044
## 9389 57125 84106 288 80303 4881 927
## -2.4965380 -2.5065592 -2.5091691 -2.5126213 -2.5137543 -2.5236486 -2.5269844
## 64129 84707 478 5625 8817 167838 886
## -2.5279204 -2.5328084 -2.5372995 -2.5373362 -2.5394264 -2.5519627 -2.5548926
## 79190 127707 84570 102724536 23017 116362 6445
## -2.5786749 -2.5829511 -2.6011171 -2.6027852 -2.6057209 -2.6173031 -2.6191312
## <NA> 5348 761 5176 146760 2254 8483
## -2.6212609 -2.6353171 -2.6399475 -2.6547355 -2.6550956 -2.6560109 -2.6568885
## 23563 116442 11170 80763 4674 23086 79689
## -2.6569672 -2.6729456 -2.6899715 -2.6940667 -2.6940847 -2.7305494 -2.7326783
## 1396 358 146177 7060 80760 4856 2353
## -2.7433910 -2.7477584 -2.7677398 -2.7766264 -2.7914443 -2.7963531 -2.8003467
## 314 7148 80144 80183 340527 151449 79365
## -2.8189774 -2.8209764 -2.8526207 -2.8534121 -2.8599437 -2.8802087 -2.8828343
## 117 1474 81578 653075 653125 64094 148113
## -2.8851281 -2.8983574 -2.9016358 -2.9213505 -2.9213505 -2.9283426 -2.9324308
## 2533 <NA> 389084 1357 1674 <NA> 283298
## -2.9343020 -2.9444983 -2.9579321 -2.9928880 -3.0385281 -3.0470740 -3.0478592
## 4056 1298 8822 55001 7058 10391 10457
## -3.0563739 -3.0584203 -3.0663975 -3.0740809 -3.0775659 -3.0793101 -3.0885733
## 3131 27074 1297 1299 283358 3209 64084
## -3.1093834 -3.1148666 -3.1155823 -3.1212880 -3.1223462 -3.1367622 -3.1681167
## 84894 8447 54437 345930 57530 112609 692094
## -3.2045610 -3.2156847 -3.2168971 -3.2577200 -3.2649657 -3.2661446 -3.2714225
## 646658 123099 3587 2139 645121 23544 127435
## -3.2984558 -3.3177486 -3.3259846 -3.3402133 -3.3565827 -3.3782388 -3.3917972
## 1549 55801 140578 2700 492 25791 1302
## -3.3960020 -3.3974873 -3.4279217 -3.4311923 -3.4701327 -3.4740315 -3.4836241
## 164395 2487 25830 59344 8707 56062 1746
## -3.4989367 -3.5624583 -3.5887557 -3.6133828 -3.6141458 -3.6893868 -3.6994728
## 145270 119395 70 24141 440738 3736 477
## -3.7236172 -3.7326232 -3.7367130 -3.7673604 -3.8336768 -3.8370090 -3.8443855
## 338773 136227 9671 339855 64090 8435 23349
## -3.9028850 -3.9157039 -3.9390511 -3.9511792 -4.0158539 -4.0266382 -4.0877327
## 2625 10242 10218 9379 26290 392617 4653
## -4.1080335 -4.1287526 -4.1415232 -4.1662847 -4.2475278 -4.3210423 -4.3216292
## 553158 3742 9595 5224 57167 388336 6696
## -4.3334952 -4.3462974 -4.4481354 -4.4732641 -4.4830826 -4.4962252 -4.5269145
## 642273 11061 3861 2899 30812 125113 7139
## -4.5396177 -4.5855136 -4.6367716 -4.7247058 -4.7537394 -4.7863795 -4.8273444
## 107984345 114792 7140 6423 2660 91156 3857
## -4.8500319 -4.9583273 -5.0103509 -5.0594071 -5.0658405 -5.2053899 -5.2641292
## <NA> 90586 <NA> 2982 7135 6755 3868
## -5.2813826 -5.2813826 -5.3334705 -5.3746632 -5.4576301 -5.4954160 -5.5428803
## 1280 192666 3851 <NA> 114905 4242 90167
## -5.8115711 -6.0834315 -6.1676620 -6.2365948 -6.2663336 -6.3802309 -6.4651590
## 390664 <NA> <NA> <NA>
## -6.5076834 -6.7751559 -7.4355326 -7.5193246#gene_ids <- bitr(tmp, fromType = tmp$hgnc_symbol, toType =tmp$entrezgene_id, OrgDb = org.Hs.eg.db)
# GO over-representation test
ego <- clusterProfiler::enrichKEGG(gene= gene, organism = 'hsa',
keyType = "kegg",
pvalueCutoff = 0.05,
qvalueCutoff = 0.01)## Reading KEGG annotation online: "https://rest.kegg.jp/link/hsa/pathway"...## Reading KEGG annotation online: "https://rest.kegg.jp/list/pathway/hsa"...#egoKEGG<-gseKEGG(geneList = gene_list,
#organism="hsa",
#keyType = "kegg",
#pvalueCutoff = 0.001,
#pAdjustMethod = "BH")
#summary(egoKEGG)
summary(ego)## Warning in summary(ego): summary method to convert the object to data.frame is
## deprecated, please use as.data.frame instead.## ID Description
## hsa05012 hsa05012 Parkinson disease
## hsa00190 hsa00190 Oxidative phosphorylation
## hsa03050 hsa03050 Proteasome
## hsa05020 hsa05020 Prion disease
## hsa05208 hsa05208 Chemical carcinogenesis - reactive oxygen species
## hsa05010 hsa05010 Alzheimer disease
## hsa05415 hsa05415 Diabetic cardiomyopathy
## hsa04668 hsa04668 TNF signaling pathway
## hsa04932 hsa04932 Non-alcoholic fatty liver disease
## hsa05022 hsa05022 Pathways of neurodegeneration - multiple diseases
## hsa05016 hsa05016 Huntington disease
## hsa04714 hsa04714 Thermogenesis
## hsa05014 hsa05014 Amyotrophic lateral sclerosis
## hsa05323 hsa05323 Rheumatoid arthritis
## hsa04657 hsa04657 IL-17 signaling pathway
## hsa05222 hsa05222 Small cell lung cancer
## hsa05017 hsa05017 Spinocerebellar ataxia
## hsa00010 hsa00010 Glycolysis / Gluconeogenesis
## hsa05165 hsa05165 Human papillomavirus infection
## hsa04978 hsa04978 Mineral absorption
## hsa00020 hsa00020 Citrate cycle (TCA cycle)
## hsa04066 hsa04066 HIF-1 signaling pathway
## hsa04141 hsa04141 Protein processing in endoplasmic reticulum
## hsa05230 hsa05230 Central carbon metabolism in cancer
## hsa05169 hsa05169 Epstein-Barr virus infection
## hsa04974 hsa04974 Protein digestion and absorption
## hsa04964 hsa04964 Proximal tubule bicarbonate reclamation
## hsa04260 hsa04260 Cardiac muscle contraction
## hsa04512 hsa04512 ECM-receptor interaction
## hsa05110 hsa05110 Vibrio cholerae infection
## hsa05410 hsa05410 Hypertrophic cardiomyopathy
## hsa05120 hsa05120 Epithelial cell signaling in Helicobacter pylori infection
## hsa04933 hsa04933 AGE-RAGE signaling pathway in diabetic complications
## hsa05167 hsa05167 Kaposi sarcoma-associated herpesvirus infection
## hsa04931 hsa04931 Insulin resistance
## GeneRatio BgRatio pvalue p.adjust qvalue
## hsa05012 104/1483 266/8466 2.191612e-17 7.341901e-15 5.490565e-15
## hsa00190 65/1483 134/8466 1.006695e-16 1.686214e-14 1.261018e-14
## hsa03050 32/1483 46/8466 8.727506e-15 9.745715e-13 7.288233e-13
## hsa05020 99/1483 272/8466 3.152661e-14 2.465277e-12 1.843632e-12
## hsa05208 86/1483 223/8466 3.679518e-14 2.465277e-12 1.843632e-12
## hsa05010 124/1483 384/8466 4.311158e-13 2.407063e-11 1.800097e-11
## hsa05415 76/1483 203/8466 6.722128e-12 3.217018e-10 2.405814e-10
## hsa04668 51/1483 114/8466 1.049915e-11 4.396520e-10 3.287892e-10
## hsa04932 60/1483 155/8466 2.432185e-10 9.053133e-09 6.770293e-09
## hsa05022 133/1483 476/8466 4.275132e-09 1.432169e-07 1.071033e-07
## hsa05016 94/1483 306/8466 6.208880e-09 1.890886e-07 1.414080e-07
## hsa04714 76/1483 232/8466 8.651858e-09 2.415310e-07 1.806265e-07
## hsa05014 104/1483 364/8466 6.759172e-08 1.741787e-06 1.302577e-06
## hsa05323 35/1483 93/8466 2.907420e-06 6.957040e-05 5.202751e-05
## hsa04657 35/1483 94/8466 3.863418e-06 8.628301e-05 6.452586e-05
## hsa05222 34/1483 92/8466 6.412025e-06 1.342518e-04 1.003988e-04
## hsa05017 46/1483 143/8466 1.297075e-05 2.556001e-04 1.911479e-04
## hsa00010 26/1483 67/8466 2.892354e-05 5.382993e-04 4.025616e-04
## hsa05165 87/1483 331/8466 3.077063e-05 5.425347e-04 4.057290e-04
## hsa04978 24/1483 60/8466 3.244742e-05 5.434942e-04 4.064466e-04
## hsa00020 15/1483 30/8466 4.630507e-05 7.386761e-04 5.524113e-04
## hsa04066 36/1483 109/8466 5.954720e-05 9.067414e-04 6.780973e-04
## hsa04141 51/1483 173/8466 6.405356e-05 9.329541e-04 6.977001e-04
## hsa05230 26/1483 70/8466 6.974632e-05 9.735424e-04 7.280537e-04
## hsa05169 57/1483 202/8466 9.408889e-05 1.233669e-03 9.225870e-04
## hsa04974 34/1483 103/8466 9.574747e-05 1.233669e-03 9.225870e-04
## hsa04964 12/1483 23/8466 1.604104e-04 1.990277e-03 1.488408e-03
## hsa04260 29/1483 87/8466 2.528139e-04 3.024738e-03 2.262019e-03
## hsa04512 29/1483 89/8466 3.905437e-04 4.511453e-03 3.373844e-03
## hsa05110 19/1483 50/8466 4.616324e-04 5.154895e-03 3.855035e-03
## hsa05410 29/1483 90/8466 4.815417e-04 5.203757e-03 3.891576e-03
## hsa05120 24/1483 70/8466 5.284044e-04 5.531734e-03 4.136850e-03
## hsa04933 31/1483 100/8466 6.606417e-04 6.706514e-03 5.015398e-03
## hsa05167 52/1483 194/8466 7.234645e-04 7.128253e-03 5.330791e-03
## hsa04931 32/1483 108/8466 1.282028e-03 1.227083e-02 9.176618e-03
## geneID
## hsa05012 135/11047/498/506/509/514/516/518/10476/522/598/91860/815/817/1327/9377/1329/1340/1345/1347/1349/1350/54205/1649/1843/1965/2770/2774/3800/4128/4129/4217/9927/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/11315/10105/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/6389/6391/5413/4891/292/57181/23516/55630/7922/64116/347733/7295/25828/9246/10975/7384/7386/27089/7416/7417
## hsa00190 498/506/509/514/516/518/521/9551/10632/10476/522/537/533/527/9114/8992/529/9296/9550/534/51606/10063/1327/9377/1329/1340/1345/1347/1349/1350/54205/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5464/27068/6389/6391/10312/10975/7384/7386/27089
## hsa03050 11047/51371/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## hsa05020 11047/498/506/509/514/516/518/10476/522/727/775/6352/1327/9377/1329/1340/1345/1347/1349/1350/1385/64764/1459/54205/1649/1958/1965/2534/116443/3569/3800/3915/5600/4684/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5291/5293/8503/10105/5580/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/6389/6391/292/10963/347733/10975/7384/7386/27089/7416/7417
## hsa05208 25/27/1645/1646/8644/369/498/506/509/514/516/518/10476/522/873/1147/1327/9377/1329/1340/1345/1347/1349/1350/1571/2353/2946/2948/9446/3091/8517/5604/9020/4217/5600/4257/4258/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/4792/5291/5293/8503/5337/5338/10105/5580/5587/5770/5781/5795/6389/6391/292/6648/6655/10975/7384/7386/27089/7416/7417
## hsa05010 11047/369/22863/488/489/498/506/509/514/516/518/10476/522/8678/637/775/91860/1020/1139/1147/1327/9377/1329/1340/1345/1347/1349/1350/1435/1454/1459/54205/1649/1965/8772/355/2597/3028/8517/3569/3667/3800/5604/4217/2475/23385/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/4843/5291/5293/8503/10105/5663/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/5743/6389/6391/4891/292/57181/23516/55630/7922/64116/7186/347733/10975/7384/7386/27089/7416/7417/55062/7482/7474/7483
## hsa05415 183/488/489/498/506/509/514/516/518/10476/522/815/817/1281/1327/9377/1329/1340/1345/1347/1349/1350/2597/9945/2936/2997/3667/5600/2475/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/5162/5166/5291/5293/8503/10105/5580/5590/6389/6391/292/6513/7042/7043/7046/10975/7384/7386/27089/7416/7417
## hsa04668 9530/602/330/6347/6364/6352/1051/8837/1147/1385/64764/1435/1437/2919/3627/2920/2921/6374/6372/1540/1906/8772/355/2353/3383/8517/3600/3569/3659/3976/5604/5606/5608/9020/4217/1326/5600/4314/4790/4792/64127/5291/5293/8503/5743/6401/23118/7128/7133/7186/7187
## hsa04932 51094/637/1327/9377/1329/1340/1345/1347/1349/1350/3576/54205/1571/1649/1965/355/2353/3569/3667/4217/5600/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/10062/5291/5293/8503/5563/51422/6389/6391/7186/10975/7384/7386/27089
## hsa05022 11047/369/22863/488/489/498/506/509/514/516/518/10476/522/4287/578/598/627/8678/637/775/91860/815/817/1020/1139/1327/9377/1329/1340/1345/1347/1349/1350/1435/1454/1459/54205/1649/79139/201625/1965/8772/355/3028/3569/3800/440738/5604/5606/5608/4217/5600/9927/2475/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/4843/10133/11315/10105/5630/5663/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/5743/116442/6389/6391/5413/292/7133/10452/7186/347733/9246/10975/7384/7386/27089/9217/7415/7416/7417/55062/7482/7474/7483
## hsa05016 11047/22863/498/506/509/514/516/518/10476/522/627/8678/1211/1327/9377/1329/1340/1345/1347/1349/1350/1385/64764/54205/201625/3065/3800/4217/2475/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5435/5440/10105/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/6389/6391/292/6648/7186/347733/10975/7384/7386/27089/7416/7417/55062
## hsa04714 2181/2182/84335/498/506/509/514/516/518/521/9551/10632/10476/522/28958/51287/388753/84987/51241/10063/1327/9377/1329/1340/1345/1347/1349/1350/1385/64764/5606/4217/5600/2475/4694/51079/4695/4696/4697/4701/4702/4704/4706/51103/91942/29078/284184/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4881/63976/5563/51422/6389/6391/6595/6603/6655/10975/7384/7386/27089
## hsa05014 11047/283/22863/498/506/509/514/516/518/10476/522/598/8678/637/1327/9377/1329/1340/1345/1347/1349/1350/54205/1649/79139/201625/1965/3800/440738/5606/5608/4217/5600/2475/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4843/9542/55916/10133/5630/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/116442/6389/6391/7133/10452/7186/347733/29978/10975/7384/7386/27089/9217/7415/7416/55062
## hsa05323 284/537/533/527/9114/8992/529/9296/9550/534/51606/6347/6364/6348/6352/1435/1437/1513/2919/2920/2921/6374/6372/3576/2353/3383/3589/3600/51561/3569/4312/4314/10312/7042/7043
## hsa04657 6356/6347/6364/6354/1051/1147/1437/1440/2919/3627/2920/2921/6374/6372/3576/8772/2353/2354/8517/132014/3569/3934/5600/225689/4312/4314/4790/4792/5743/23118/7128/7186/7187/10758/29761
## hsa05222 578/598/330/898/1021/1030/1147/1282/1284/1285/1286/54205/1871/4616/8517/3685/3688/3908/3909/3910/3912/3914/3915/3918/4790/4792/4843/5291/5293/8503/5743/5915/7186/7187
## hsa05017 11047/22863/488/489/4287/8678/54205/116443/3752/4217/2475/5291/5293/8503/10105/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/6095/292/7186/7416/7417/7436/55062
## hsa00010 83440/219/217/226/1737/2023/2026/387712/92579/130589/2597/2821/3099/3939/3945/9562/5105/5106/5162/5211/5214/5223/5224/5230/5315/7167
## hsa05165 472/537/533/527/9114/8992/529/9296/9550/534/51606/545/578/896/898/1021/1101/1147/1280/1282/1284/1285/1286/1297/1298/1299/1385/64764/8772/355/2308/3065/3105/3454/3455/8517/3659/9636/3672/8515/22801/3685/3688/3908/3909/3910/3912/3914/3915/3918/3955/3993/5604/4242/2475/4790/4799/8638/50855/5291/5293/8503/5315/5516/5519/5525/5526/5584/5590/5663/5734/5743/5986/6655/6696/6772/6934/10312/7058/7059/7060/7148/7187/23352/7482/7474/7483
## hsa04978 475/476/477/478/481/483/492/493/540/79901/2495/4493/4494/4495/4501/4502/4891/7779/142680/55630/6547/6550/26872/54822
## hsa00020 47/48/50/1737/3419/4190/4191/5091/5105/5106/5162/6389/6391/8803/8801
## hsa04066 226/284/815/817/1906/54583/112399/1977/6921/2023/2026/387712/2064/2597/3091/3099/3459/3460/3569/3939/3945/5604/8569/2475/4790/4843/5162/5163/5211/5214/5230/5291/5293/8503/6513/7037
## hsa04141 4287/573/9532/578/10970/1410/1649/79139/51009/3301/51726/64215/5611/80331/55741/111089941/80267/1965/27248/30001/22824/10525/4121/57134/4217/51360/58505/5034/2923/9601/23645/5886/6184/6185/51128/10483/9871/22872/10952/23480/55829/64374/6500/6747/201595/7186/51619/10277/29978/7353/7415
## hsa05230 2064/2263/2261/2744/3091/3099/3939/3945/5604/2475/5162/5163/5211/5214/5223/5224/5291/5293/8503/5315/9997/23410/9123/6510/6513/57103
## hsa05169 11047/567/578/637/896/898/1021/1147/3627/54205/1871/8772/355/4616/3065/3105/3383/3454/3455/8517/3569/51135/9636/5606/5608/9020/5600/4790/4791/4792/4793/4794/4938/2923/5291/5293/8503/5704/5705/5707/5717/10213/5708/5709/5710/5713/5971/22938/6772/23118/6890/6891/6892/7128/7186/7187/7431
## hsa04974 476/477/478/481/483/1302/1303/1306/80781/81578/169044/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/1357/3783/6510/120103/54407/9056/23428/6547/6550
## hsa04964 358/476/477/478/481/483/760/2744/4190/5105/5106/6550
## hsa04260 70/444/476/477/478/481/483/488/489/775/782/27092/1327/9377/1329/1340/1345/1347/1349/1350/6547/7134/7139/7168/7169/10975/7384/7386/27089
## hsa04512 375790/1101/1280/1282/1284/1285/1286/1297/1298/1299/80144/2812/3672/8515/22801/3685/3688/3908/3909/3910/3912/3914/3915/3918/6696/7058/7059/7060/7148
## hsa05110 375/537/533/527/9114/8992/529/9296/9550/534/51606/30001/9601/10952/23480/6558/10312/7082/9414
## hsa05410 70/183/488/489/775/782/27092/1674/1906/3569/3672/8515/22801/3685/3688/3908/4000/5563/51422/6442/6443/6445/6547/7042/7043/7134/7139/7168/7169
## hsa05120 537/533/527/9114/8992/529/9296/9550/534/51606/6352/1147/2919/2920/2921/3576/8517/9020/5600/4790/4792/5781/10312/7082
## hsa04933 183/6347/1281/1282/1284/1285/1286/3576/1906/1958/2152/2308/3383/3569/5600/4772/4790/5291/5293/8503/5333/113026/5580/5590/6401/6772/6777/7042/7043/7046/7056
## hsa05167 22863/64422/578/8678/637/718/91860/1021/1147/1385/1437/2919/2920/2921/3576/54205/1871/8772/355/2353/59345/10681/2791/2788/3055/3091/3105/3383/3454/3455/3459/8517/3569/440738/5604/5608/5600/9261/2475/4772/4790/4792/5291/5293/8503/5743/1827/6772/6934/7186/7187/7538
## hsa04931 183/1385/64764/2308/92579/9945/2997/3569/3667/2475/4790/4792/7376/10062/10724/8473/5105/5106/5291/5293/8503/79660/5507/5563/51422/5580/5590/5770/5781/11000/6513/57761
## Count
## hsa05012 104
## hsa00190 65
## hsa03050 32
## hsa05020 99
## hsa05208 86
## hsa05010 124
## hsa05415 76
## hsa04668 51
## hsa04932 60
## hsa05022 133
## hsa05016 94
## hsa04714 76
## hsa05014 104
## hsa05323 35
## hsa04657 35
## hsa05222 34
## hsa05017 46
## hsa00010 26
## hsa05165 87
## hsa04978 24
## hsa00020 15
## hsa04066 36
## hsa04141 51
## hsa05230 26
## hsa05169 57
## hsa04974 34
## hsa04964 12
## hsa04260 29
## hsa04512 29
## hsa05110 19
## hsa05410 29
## hsa05120 24
## hsa04933 31
## hsa05167 52
## hsa04931 32head(summary(ego))## Warning in summary(ego): summary method to convert the object to data.frame is
## deprecated, please use as.data.frame instead.## ID Description GeneRatio
## hsa05012 hsa05012 Parkinson disease 104/1483
## hsa00190 hsa00190 Oxidative phosphorylation 65/1483
## hsa03050 hsa03050 Proteasome 32/1483
## hsa05020 hsa05020 Prion disease 99/1483
## hsa05208 hsa05208 Chemical carcinogenesis - reactive oxygen species 86/1483
## hsa05010 hsa05010 Alzheimer disease 124/1483
## BgRatio pvalue p.adjust qvalue
## hsa05012 266/8466 2.191612e-17 7.341901e-15 5.490565e-15
## hsa00190 134/8466 1.006695e-16 1.686214e-14 1.261018e-14
## hsa03050 46/8466 8.727506e-15 9.745715e-13 7.288233e-13
## hsa05020 272/8466 3.152661e-14 2.465277e-12 1.843632e-12
## hsa05208 223/8466 3.679518e-14 2.465277e-12 1.843632e-12
## hsa05010 384/8466 4.311158e-13 2.407063e-11 1.800097e-11
## geneID
## hsa05012 135/11047/498/506/509/514/516/518/10476/522/598/91860/815/817/1327/9377/1329/1340/1345/1347/1349/1350/54205/1649/1843/1965/2770/2774/3800/4128/4129/4217/9927/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/11315/10105/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/6389/6391/5413/4891/292/57181/23516/55630/7922/64116/347733/7295/25828/9246/10975/7384/7386/27089/7416/7417
## hsa00190 498/506/509/514/516/518/521/9551/10632/10476/522/537/533/527/9114/8992/529/9296/9550/534/51606/10063/1327/9377/1329/1340/1345/1347/1349/1350/54205/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5464/27068/6389/6391/10312/10975/7384/7386/27089
## hsa03050 11047/51371/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## hsa05020 11047/498/506/509/514/516/518/10476/522/727/775/6352/1327/9377/1329/1340/1345/1347/1349/1350/1385/64764/1459/54205/1649/1958/1965/2534/116443/3569/3800/3915/5600/4684/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5291/5293/8503/10105/5580/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/6389/6391/292/10963/347733/10975/7384/7386/27089/7416/7417
## hsa05208 25/27/1645/1646/8644/369/498/506/509/514/516/518/10476/522/873/1147/1327/9377/1329/1340/1345/1347/1349/1350/1571/2353/2946/2948/9446/3091/8517/5604/9020/4217/5600/4257/4258/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/4792/5291/5293/8503/5337/5338/10105/5580/5587/5770/5781/5795/6389/6391/292/6648/6655/10975/7384/7386/27089/7416/7417
## hsa05010 11047/369/22863/488/489/498/506/509/514/516/518/10476/522/8678/637/775/91860/1020/1139/1147/1327/9377/1329/1340/1345/1347/1349/1350/1435/1454/1459/54205/1649/1965/8772/355/2597/3028/8517/3569/3667/3800/5604/4217/2475/23385/4694/51079/4695/4696/4697/4701/4702/4704/4706/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/4790/4843/5291/5293/8503/10105/5663/5682/5683/5684/5685/5686/5687/5688/5689/5690/5691/5692/5693/5694/5695/5704/5705/5707/5717/10213/5708/5709/5710/5713/5715/5743/6389/6391/4891/292/57181/23516/55630/7922/64116/7186/347733/10975/7384/7386/27089/7416/7417/55062/7482/7474/7483
## Count
## hsa05012 104
## hsa00190 65
## hsa03050 32
## hsa05020 99
## hsa05208 86
## hsa05010 124browseKEGG(ego,'hsa05012')hsa05012 <- pathview(gene.data = gene_list,
pathway.id = "hsa05012",
species = "hsa",
limit = list(gene=max(abs(gene_list)), cpd=1))## 'select()' returned 1:1 mapping between keys and columns## Info: Working in directory /Users/aungphyo/Desktop/June Project## Info: Writing image file hsa05012.pathview.pnghsa05012## $plot.data.gene
## kegg.names labels
## 5 120892 LRRK2
## 11 7317 UBA1
## 12 6233 RPS27A
## 13 9246 UBE2L6
## 14 6233 RPS27A
## 15 5071 PRKN
## 16 5413 SEPTIN5
## 17 9627 SNCAIP
## 18 2861 GPR37
## 19 11315 PARK7
## 20 65018 PINK1
## 21 6622 SNCA
## 22 7345 UCHL1
## 25 54205 CYCS
## 26 4694 NDUFA1
## 27 6389 SDHA
## 28 7384 UQCRC1
## 29 1327 COX4I1
## 30 498 ATP5F1A
## 31 27429 HTRA2
## 32 292 SLC25A5
## 45 6233 RPS27A
## 46 6233 RPS27A
## 47 6233 RPS27A
## 48 6233 RPS27A
## 49 6233 RPS27A
## 50 6233 RPS27A
## 59 6233 RPS27A
## 60 6233 RPS27A
## 61 6233 RPS27A
## 139 7326 UBE2G1
## 149 7054 TH
## 150 6531 SLC6A3
## 152 842 CASP9
## 153 836 CASP3
## 155 317 APAF1
## 159 6570 SLC18A1
## 160 6531 SLC6A3
## 168 135 ADORA2A
## 169 1813 DRD2
## 170 1812 DRD1
## 171 2774 GNAL
## 172 2770 GNAI1
## 173 2774 GNAL
## 174 111 ADCY5
## 175 111 ADCY5
## 176 5566 PRKACA
## 177 5566 PRKACA
## 229 6622 SNCA
## 232 9451 EIF2AK3
## 233 2081 ERN1
## 234 22926 ATF6
## 236 1965 EIF2S1
## 237 468 ATF4
## 241 7494 XBP1
## 243 1649 DDIT3
## 244 1649 DDIT3
## 248 3309 HSPA5
## 255 6622 SNCA
## 260 5682 PSMA1
## 261 5704 PSMC4
## 267 3708 ITPR1
## 271 5335 PLCG1
## 272 6622 SNCA
## 273 5071 PRKN
## 278 91860 CALML4
## 279 815 CAMK2A
## 280 4137 MAPT
## 284 6263 RYR3
## 292 3800 KIF5C
## 295 7277 TUBA4A
## 296 347733 TUBB2B
## 300 6622 SNCA
## 304 65018 PINK1
## 307 5071 PRKN
## 314 65018 PINK1
## 315 5071 PRKN
## 316 581 BAX
## 323 6622 SNCA
## 326 11315 PARK7
## 327 598 BCL2L1
## 332 10131 TRAP1
## 335 65018 PINK1
## 338 7157 TP53
## 343 1616 DAXX
## 344 4217 MAP3K5
## 345 5599 MAPK8
## 347 4780 NFE2L2
## 361 1843 DUSP1
## 362 7295 TXN
## 364 6570 SLC18A1
## 365 6622 SNCA
## 368 5071 PRKN
## 374 4128 MAOA
## 375 5071 PRKN
## 382 90550 MCU
## 398 9927 MFN2
## 402 6622 SNCA
## 711 6531 SLC6A3
## 714 9817 KEAP1
## 715 7295 TXN
## 724 4891 SLC11A2
## 735 6647 SOD1
## all.mapped
## 5
## 11
## 12
## 13 9246
## 14
## 15
## 16 5413
## 17
## 18
## 19 11315
## 20
## 21
## 22
## 25 54205
## 26 4694,4695,4696,4697,4701,4702,4704,4706,4707,4708,4709,4710,4711,4712,4714,4715,4717,4718,4719,4725,4726,4728,4729,51079,54539
## 27 6389,6391
## 28 7384,7386,10975,27089
## 29 1327,1329,1340,1345,1347,1349,1350,9377
## 30 498,506,509,514,516,518,522,10476
## 31
## 32 292,7416,7417,10105
## 45
## 46
## 47
## 48
## 49
## 50
## 59
## 60
## 61
## 139
## 149
## 150
## 152
## 153
## 155
## 159
## 160
## 168 135
## 169
## 170
## 171 2774
## 172 2770
## 173 2774
## 174
## 175
## 176
## 177
## 229
## 232
## 233
## 234
## 236 1965
## 237
## 241
## 243 1649
## 244 1649
## 248
## 255
## 260 5682,5683,5684,5685,5686,5687,5688,5689,5690,5691,5692,5693,5694,5695
## 261 5704,5705,5707,5708,5709,5710,5713,5715,5717,10213,11047
## 267
## 271
## 272
## 273
## 278 91860
## 279 815,817
## 280
## 284
## 292 3800
## 295
## 296 347733
## 300
## 304
## 307
## 314
## 315
## 316
## 323
## 326 11315
## 327 598
## 332
## 335
## 338
## 343
## 344 4217
## 345
## 347
## 361 1843
## 362 7295,25828
## 364
## 365
## 368
## 374 4128,4129
## 375
## 382
## 398 9927
## 402
## 711
## 714
## 715 7295,25828
## 724 4891,7922,23516,55630,57181,64116
## 735
## type x y width height mol.data mol.col
## 5 gene 1180 963 46 17 NA #FFFFFF
## 11 gene 730 185 46 17 NA #FFFFFF
## 12 gene 730 215 46 17 NA #FFFFFF
## 13 gene 825 185 46 17 0.3191084 #BEBEBE
## 14 gene 825 215 46 17 NA #FFFFFF
## 15 gene 996 227 46 17 NA #FFFFFF
## 16 gene 1102 354 46 17 -1.0010985 #BEBEBE
## 17 gene 1102 385 46 17 NA #FFFFFF
## 18 gene 1102 322 46 17 NA #FFFFFF
## 19 gene 1086 1303 46 17 0.3994953 #BEBEBE
## 20 gene 915 1183 46 17 NA #FFFFFF
## 21 gene 1185 271 46 17 NA #FFFFFF
## 22 gene 825 439 46 17 NA #FFFFFF
## 25 gene 1318 1019 46 17 1.0141319 #BEBEBE
## 26 gene 869 990 46 17 13.2562200 #FF0000
## 27 gene 869 1025 46 17 0.8619377 #BEBEBE
## 28 gene 869 1056 46 17 2.1964764 #BEBEBE
## 29 gene 869 1089 46 17 4.1905008 #CE8F8F
## 30 gene 869 1121 46 17 4.3905575 #CE8F8F
## 31 gene 1172 1009 46 17 NA #FFFFFF
## 32 gene 1236 1073 46 17 3.1198377 #CE8F8F
## 45 gene 911 395 46 17 NA #FFFFFF
## 46 gene 911 423 46 17 NA #FFFFFF
## 47 gene 911 450 46 17 NA #FFFFFF
## 48 gene 730 393 46 17 NA #FFFFFF
## 49 gene 730 423 46 17 NA #FFFFFF
## 50 gene 730 453 46 17 NA #FFFFFF
## 59 gene 1006 283 46 17 NA #FFFFFF
## 60 gene 1006 314 46 17 NA #FFFFFF
## 61 gene 1006 344 46 17 NA #FFFFFF
## 139 gene 825 276 46 17 NA #FFFFFF
## 149 gene 1164 720 46 17 NA #FFFFFF
## 150 gene 616 749 46 17 NA #FFFFFF
## 152 gene 1435 1019 46 17 NA #FFFFFF
## 153 gene 1435 969 46 17 NA #FFFFFF
## 155 gene 1370 1048 46 17 NA #FFFFFF
## 159 gene 909 863 46 17 NA #FFFFFF
## 160 gene 616 952 46 17 NA #FFFFFF
## 168 gene 407 648 46 17 2.7820393 #CE8F8F
## 169 gene 407 743 46 17 NA #FFFFFF
## 170 gene 407 1023 46 17 NA #FFFFFF
## 171 gene 330 648 46 17 0.8048066 #BEBEBE
## 172 gene 330 743 46 17 0.8899164 #BEBEBE
## 173 gene 330 1023 46 17 0.8048066 #BEBEBE
## 174 gene 294 693 46 17 NA #FFFFFF
## 175 gene 294 982 46 17 NA #FFFFFF
## 176 gene 178 693 46 17 NA #FFFFFF
## 177 gene 178 982 46 17 NA #FFFFFF
## 229 gene 1250 720 46 17 NA #FFFFFF
## 232 gene 1050 654 46 17 NA #FFFFFF
## 233 gene 1050 611 46 17 NA #FFFFFF
## 234 gene 1050 567 46 17 NA #FFFFFF
## 236 gene 1135 654 46 17 0.4941034 #BEBEBE
## 237 gene 1219 654 46 17 NA #FFFFFF
## 241 gene 1219 611 46 17 NA #FFFFFF
## 243 gene 1394 567 46 17 -1.0914868 #BEBEBE
## 244 gene 1394 654 46 17 -1.0914868 #BEBEBE
## 248 gene 980 611 46 17 NA #FFFFFF
## 255 gene 947 571 46 17 NA #FFFFFF
## 260 gene 1292 176 46 17 6.5019065 #DF5F5F
## 261 gene 1292 193 46 17 4.5349123 #DF5F5F
## 267 gene 878 627 46 17 NA #FFFFFF
## 271 gene 781 683 46 17 NA #FFFFFF
## 272 gene 616 608 46 17 NA #FFFFFF
## 273 gene 679 683 46 17 NA #FFFFFF
## 278 gene 740 512 46 17 -0.9293267 #BEBEBE
## 279 gene 818 512 46 17 -2.2160017 #BEBEBE
## 280 gene 896 512 46 17 NA #FFFFFF
## 284 gene 878 599 46 17 NA #FFFFFF
## 292 gene 840 1338 46 17 -0.9943274 #BEBEBE
## 295 gene 751 1359 46 17 NA #FFFFFF
## 296 gene 797 1359 46 17 1.0314318 #BEBEBE
## 300 gene 755 1323 46 17 NA #FFFFFF
## 304 gene 762 1006 46 17 NA #FFFFFF
## 307 gene 1006 1192 46 17 NA #FFFFFF
## 314 gene 1250 1149 46 17 NA #FFFFFF
## 315 gene 1330 1129 46 17 NA #FFFFFF
## 316 gene 1250 1104 46 17 NA #FFFFFF
## 323 gene 844 950 46 17 NA #FFFFFF
## 326 gene 1143 1139 46 17 0.3994953 #BEBEBE
## 327 gene 1185 1183 46 17 -0.4692524 #BEBEBE
## 332 gene 1172 1030 46 17 NA #FFFFFF
## 335 gene 1250 984 46 17 NA #FFFFFF
## 338 gene 1352 1330 46 17 NA #FFFFFF
## 343 gene 1156 1406 46 17 NA #FFFFFF
## 344 gene 1156 1423 46 17 1.0639852 #BEBEBE
## 345 gene 1240 1415 46 17 NA #FFFFFF
## 347 gene 1352 1372 46 17 NA #FFFFFF
## 361 gene 1467 1330 46 17 1.2495288 #BEBEBE
## 362 gene 1467 1372 46 17 0.4871233 #BEBEBE
## 364 gene 951 810 46 17 NA #FFFFFF
## 365 gene 998 773 46 17 NA #FFFFFF
## 368 gene 798 776 46 17 NA #FFFFFF
## 374 gene 1196 782 46 17 3.9328765 #CE8F8F
## 375 gene 1231 747 46 17 NA #FFFFFF
## 382 gene 965 966 46 17 NA #FFFFFF
## 398 gene 1089 1183 46 17 0.4480849 #BEBEBE
## 402 gene 1102 290 46 17 NA #FFFFFF
## 711 gene 616 1422 46 17 NA #FFFFFF
## 714 gene 1239 1372 46 17 NA #FFFFFF
## 715 gene 1140 1469 46 17 0.4871233 #BEBEBE
## 724 gene 616 1026 46 17 6.8724953 #EF3030
## 735 gene 967 1438 46 17 NA #FFFFFF
##
## $plot.data.cpd
## kegg.names labels all.mapped type x y width height mol.data
## 23 C04599 C04599 compound 511 950 8 8 NA
## 24 C07593 C07593 compound 543 989 8 8 NA
## 80 C00002 C00002 compound 946 1138 8 8 NA
## 81 C00008 C00008 compound 928 1103 8 8 NA
## 82 C00009 C00009 compound 960 1103 8 8 NA
## 89 C03758 C03758 compound 1128 819 8 8 NA
## 98 C00027 C00704 compound 1129 873 8 8 NA
## 100 C00002 C00002 compound 685 325 8 8 NA
## 101 C00020 C00020 compound 662 271 8 8 NA
## 102 C00013 C00013 compound 695 271 8 8 NA
## 104 C11310 C11310 compound 567 952 8 8 NA
## 124 C00002 C00002 compound 1121 139 8 8 NA
## 125 C00008 C00008 compound 1179 140 8 8 NA
## 126 C00009 C00009 compound 1208 140 8 8 NA
## 128 C00355 C00355 compound 1128 756 8 8 NA
## 147 C00082 C00082 compound 1128 691 8 8 NA
## 189 C03758 C03758 compound 568 831 8 8 NA
## 202 C00575 C00575 compound 236 692 8 8 NA
## 203 C00575 C00575 compound 236 981 8 8 NA
## 219 C00212 C00212 compound 465 647 8 8 NA
## 264 C01245 C01245 compound 842 656 8 8 NA
## 265 C00076 C00076 compound 795 613 8 8 NA
## 266 C00165 C00165 compound 844 693 8 8 NA
## 276 C00076 C00076 compound 560 607 8 8 NA
## 303 C15231 C15231 compound 543 1055 8 8 NA
## 372 C17755 C17755 compound 1235 819 8 8 NA
## 383 C00076 C00076 compound 966 914 8 8 NA
## 404 C04043 C04043 compound 1235 795 8 8 NA
## 706 C14701 C14701 compound 544 1419 8 8 NA
## 707 C14701 C14701 compound 885 1420 8 8 NA
## 708 C14701 C14701 compound 885 1492 8 8 NA
## 712 C00704 C00704 compound 939 1420 8 8 NA
## 713 C00007 C00007 compound 943 1492 8 8 NA
## 727 C00027 C00027 compound 1000 1420 8 8 NA
## 728 C16844 C16844 compound 1057 1420 8 8 NA
## 732 C22381 C22381 compound 1082 1370 8 8 NA
## 742 C00034 C00034 compound 543 1025 8 8 NA
## mol.col
## 23 #FFFFFF
## 24 #FFFFFF
## 80 #FFFFFF
## 81 #FFFFFF
## 82 #FFFFFF
## 89 #FFFFFF
## 98 #FFFFFF
## 100 #FFFFFF
## 101 #FFFFFF
## 102 #FFFFFF
## 104 #FFFFFF
## 124 #FFFFFF
## 125 #FFFFFF
## 126 #FFFFFF
## 128 #FFFFFF
## 147 #FFFFFF
## 189 #FFFFFF
## 202 #FFFFFF
## 203 #FFFFFF
## 219 #FFFFFF
## 264 #FFFFFF
## 265 #FFFFFF
## 266 #FFFFFF
## 276 #FFFFFF
## 303 #FFFFFF
## 372 #FFFFFF
## 383 #FFFFFF
## 404 #FFFFFF
## 706 #FFFFFF
## 707 #FFFFFF
## 708 #FFFFFF
## 712 #FFFFFF
## 713 #FFFFFF
## 727 #FFFFFF
## 728 #FFFFFF
## 732 #FFFFFF
## 742 #FFFFFFdotplot(ego,x="GeneRatio",showCategory=20,font.size=6)
#dotplot(egoKEGG,x="GeneRatio",showCategory=20,font.size=6)subset <- ego[ego$Count>=10, asis=T]
cnetplot(ego, foldChange=geneList)## Scale for size is already present.
## Adding another scale for size, which will replace the existing scale.## Warning: ggrepel: 12 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
filtered_pathway <- subset(fgsea_kegg, NES > 2.3)
filt_p <- as.vector(filtered_pathway$pathway)
for (i in filt_p){
plt <- plotEnrichment(pathway = pathway_kegg[[i]],
gseaParam = 1, ticksSize = 0.5, stats= rank) +
labs(title=i) + theme(plot.title = element_text(hjust = 0.5, face="bold"))
print(plt)
}
kegg_cytokine= subset(fgsea_kegg, fgsea_kegg$pathway=="KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION")
kegg_cytokine = unlist(kegg_cytokine$leadingEdge)
subset <- rld[kegg_cytokine, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("forestgreen","blue")
names(col) <- c("Healthy_cytokine", "Healthy_control")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "KEGG Cytokine-Cytokine Interaction",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "KEGG Cytokine-Cytokine Interaction",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
kegg_cytokine= subset(fgsea_kegg, fgsea_kegg$pathway=="KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY")
kegg_cytokine = unlist(kegg_cytokine$leadingEdge)
subset <- rld[kegg_cytokine, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("forestgreen","blue")
names(col) <- c("Healthy_cytokine", "Healthy_control")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "KEGG Oxydative Phosphorylation",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
kegg_cytokine= subset(fgsea_kegg, fgsea_kegg$pathway=="KEGG_CHEMOKINE_SIGNALING_PATHWAY")
kegg_cytokine = unlist(kegg_cytokine$leadingEdge)
subset <- rld[kegg_cytokine, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("forestgreen","blue")
names(col) <- c("Healthy_cytokine", "Healthy_control")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "KEGG Chemokine Signaling Pathway",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "KEGG Chemokine Signaling Pathway",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
Reactome
# read in gmt file
pathway_reactome <- gmtPathways("/Users/aungphyo/Downloads/c2.cp.reactome.v2023.1.Hs.symbols.gmt.txt")
head(pathway, 1)## $GOBP_MITOCHONDRIAL_GENOME_MAINTENANCE
## [1] "AKT3" "PPARGC1A" "POLG2" "PARP1" "DNA2" "TYMP"
## [7] "FLCN" "PRIMPOL" "ENDOG" "STOX1" "SLC25A4" "LIG3"
## [13] "MEF2A" "MPV17" "OPA1" "RRM2B" "POLG" "SLC25A36"
## [19] "TWNK" "RRM1" "METTL4" "SSBP1" "TOP3A" "TP53"
## [25] "TEFM" "PIF1" "SESN2" "SLC25A33" "DNAJA3" "MGME1"
## [31] "LONP1"## convert result object to dataframe
res <- as.data.frame(res1)
res$hgnc_symbol <- rownames(res)
# compute summary stat
fgsea_rank <- res %>%
dplyr::select(hgnc_symbol, log2FoldChange) %>%
na.omit() %>%
distinct() %>%
group_by(hgnc_symbol) %>%
summarize(log2foldchange=mean(log2FoldChange))
fgsea_rank## # A tibble: 16,478 × 2
## hgnc_symbol log2foldchange
## <chr> <dbl>
## 1 "" -0.0811
## 2 "A1BG" 0.178
## 3 "A1CF" 0.807
## 4 "A2M" 0.690
## 5 "A2ML1" -0.669
## 6 "A2MP1" 0.232
## 7 "A4GALT" 0.921
## 8 "A4GNT" -0.651
## 9 "AAAS" -0.282
## 10 "AACS" 0.124
## # ℹ 16,468 more rowsrank <- deframe(fgsea_rank)
head(rank, 20)## A1BG A1CF A2M A2ML1 A2MP1
## -0.08106658 0.17779131 0.80699938 0.69022080 -0.66934621 0.23223054
## A4GALT A4GNT AAAS AACS AADAT AAGAB
## 0.92105758 -0.65100877 -0.28201115 0.12395885 -0.68486107 0.36251058
## AAK1 AAMDC AAMP AANAT AAR2 AARD
## 0.06013558 -0.29388262 0.10425325 0.16858497 0.05793644 0.77611830
## AARS1 AARS2
## -0.66925235 0.04273303# run fgsea
fgsea_reactome <- fgsea(pathways=pathway_reactome, stats=rank, nperm=1000)
fgseaResTidy_reactome <- fgsea_reactome %>%
as_tibble() %>%
arrange(desc(NES))
# Show in a nice table:
fgseaResTidy_reactome %>%
dplyr::select(-leadingEdge, -ES, -nMoreExtreme) %>%
arrange(padj) %>%
DT::datatable()Cluster Profiler of Reactome
df <- as.data.frame(res1)
df$hgnc_symbol <- rownames(df)
info <- getBM(attributes=c("hgnc_symbol",
"entrezgene_id"),
filters = c("hgnc_symbol"),
values = df$hgnc_symbol,
mart = mart,
useCache=FALSE)
tmp <- merge(df, info, by="hgnc_symbol")
# subset the dataframe to include only stat sig genes
tmp <- tmp[tmp$padj < 0.05,]OrgDb <- org.Hs.eg.db
geneList <- as.vector(tmp$log2FoldChange)
names(geneList) <- as.character(tmp$entrezgene_id)
gene <- na.omit(as.character(tmp$entrezgene_id))
gene_list<-sort(geneList,decreasing = TRUE)
#gene_ids <- bitr(tmp, fromType = tmp$hgnc_symbol, toType =tmp$entrezgene_id, OrgDb = org.Hs.eg.db)
# Reactome over-representation test
ego <- enrichPathway(gene= gene, organism = 'human',
pvalueCutoff = 0.05,
qvalueCutoff = 0.01)
summary(ego)## Warning in summary(ego): summary method to convert the object to data.frame is
## deprecated, please use as.data.frame instead.## ID
## R-HSA-351202 R-HSA-351202
## R-HSA-1428517 R-HSA-1428517
## R-HSA-350562 R-HSA-350562
## R-HSA-5676590 R-HSA-5676590
## R-HSA-9020702 R-HSA-9020702
## R-HSA-5607761 R-HSA-5607761
## R-HSA-1169091 R-HSA-1169091
## R-HSA-5362768 R-HSA-5362768
## R-HSA-163200 R-HSA-163200
## R-HSA-69541 R-HSA-69541
## R-HSA-1236978 R-HSA-1236978
## R-HSA-180534 R-HSA-180534
## R-HSA-349425 R-HSA-349425
## R-HSA-69601 R-HSA-69601
## R-HSA-69610 R-HSA-69610
## R-HSA-69613 R-HSA-69613
## R-HSA-9762114 R-HSA-9762114
## R-HSA-1234176 R-HSA-1234176
## R-HSA-1234174 R-HSA-1234174
## R-HSA-449147 R-HSA-449147
## R-HSA-211733 R-HSA-211733
## R-HSA-5678895 R-HSA-5678895
## R-HSA-5387390 R-HSA-5387390
## R-HSA-180585 R-HSA-180585
## R-HSA-8854050 R-HSA-8854050
## R-HSA-9604323 R-HSA-9604323
## R-HSA-5610785 R-HSA-5610785
## R-HSA-69563 R-HSA-69563
## R-HSA-69580 R-HSA-69580
## R-HSA-75815 R-HSA-75815
## R-HSA-174113 R-HSA-174113
## R-HSA-4641257 R-HSA-4641257
## R-HSA-8941858 R-HSA-8941858
## R-HSA-5668541 R-HSA-5668541
## R-HSA-169911 R-HSA-169911
## R-HSA-450408 R-HSA-450408
## R-HSA-1168372 R-HSA-1168372
## R-HSA-195253 R-HSA-195253
## R-HSA-5358346 R-HSA-5358346
## R-HSA-69615 R-HSA-69615
## R-HSA-4641258 R-HSA-4641258
## R-HSA-187577 R-HSA-187577
## R-HSA-5610780 R-HSA-5610780
## R-HSA-5610783 R-HSA-5610783
## R-HSA-5607764 R-HSA-5607764
## R-HSA-2871837 R-HSA-2871837
## R-HSA-174084 R-HSA-174084
## R-HSA-4608870 R-HSA-4608870
## R-HSA-611105 R-HSA-611105
## R-HSA-1236974 R-HSA-1236974
## R-HSA-446652 R-HSA-446652
## R-HSA-5619084 R-HSA-5619084
## R-HSA-8939902 R-HSA-8939902
## R-HSA-174154 R-HSA-174154
## R-HSA-5658442 R-HSA-5658442
## R-HSA-450531 R-HSA-450531
## R-HSA-69017 R-HSA-69017
## R-HSA-69202 R-HSA-69202
## R-HSA-983705 R-HSA-983705
## R-HSA-1236975 R-HSA-1236975
## R-HSA-69656 R-HSA-69656
## R-HSA-8948751 R-HSA-8948751
## R-HSA-9759194 R-HSA-9759194
## R-HSA-174184 R-HSA-174184
## R-HSA-1474290 R-HSA-1474290
## R-HSA-174178 R-HSA-174178
## R-HSA-179419 R-HSA-179419
## R-HSA-202424 R-HSA-202424
## R-HSA-9755511 R-HSA-9755511
## R-HSA-5632684 R-HSA-5632684
## R-HSA-9013694 R-HSA-9013694
## R-HSA-5687128 R-HSA-5687128
## R-HSA-8878159 R-HSA-8878159
## R-HSA-176409 R-HSA-176409
## R-HSA-176814 R-HSA-176814
## R-HSA-9711123 R-HSA-9711123
## R-HSA-176408 R-HSA-176408
## R-HSA-68949 R-HSA-68949
## R-HSA-5357801 R-HSA-5357801
## R-HSA-202403 R-HSA-202403
## R-HSA-6799198 R-HSA-6799198
## R-HSA-109581 R-HSA-109581
## R-HSA-4086400 R-HSA-4086400
## R-HSA-2022090 R-HSA-2022090
## R-HSA-5689603 R-HSA-5689603
## R-HSA-8852276 R-HSA-8852276
## R-HSA-174143 R-HSA-174143
## R-HSA-453276 R-HSA-453276
## R-HSA-382556 R-HSA-382556
## R-HSA-1650814 R-HSA-1650814
## R-HSA-69052 R-HSA-69052
## R-HSA-5684996 R-HSA-5684996
## R-HSA-3000157 R-HSA-3000157
## R-HSA-5673001 R-HSA-5673001
## R-HSA-1268020 R-HSA-1268020
## R-HSA-168142 R-HSA-168142
## R-HSA-168176 R-HSA-168176
## R-HSA-975871 R-HSA-975871
## R-HSA-5683057 R-HSA-5683057
## R-HSA-168164 R-HSA-168164
## R-HSA-8878166 R-HSA-8878166
## R-HSA-1474244 R-HSA-1474244
## R-HSA-166166 R-HSA-166166
## R-HSA-937061 R-HSA-937061
## R-HSA-5621481 R-HSA-5621481
## R-HSA-2454202 R-HSA-2454202
## R-HSA-1257604 R-HSA-1257604
## R-HSA-5610787 R-HSA-5610787
## R-HSA-1442490 R-HSA-1442490
## R-HSA-157118 R-HSA-157118
## R-HSA-162909 R-HSA-162909
## R-HSA-5663202 R-HSA-5663202
## R-HSA-8949613 R-HSA-8949613
## R-HSA-8948216 R-HSA-8948216
## R-HSA-975138 R-HSA-975138
## R-HSA-1474228 R-HSA-1474228
## R-HSA-975155 R-HSA-975155
## R-HSA-168181 R-HSA-168181
## R-HSA-450294 R-HSA-450294
## R-HSA-163210 R-HSA-163210
## R-HSA-6807070 R-HSA-6807070
## R-HSA-453279 R-HSA-453279
## R-HSA-5358351 R-HSA-5358351
## R-HSA-71387 R-HSA-71387
## R-HSA-168138 R-HSA-168138
## R-HSA-3858494 R-HSA-3858494
## R-HSA-70263 R-HSA-70263
## R-HSA-8939236 R-HSA-8939236
## R-HSA-69206 R-HSA-69206
## R-HSA-448424 R-HSA-448424
## R-HSA-9006925 R-HSA-9006925
## R-HSA-166058 R-HSA-166058
## R-HSA-168188 R-HSA-168188
## R-HSA-71406 R-HSA-71406
## R-HSA-453274 R-HSA-453274
## R-HSA-2214320 R-HSA-2214320
## R-HSA-1638074 R-HSA-1638074
## R-HSA-5628897 R-HSA-5628897
## R-HSA-168179 R-HSA-168179
## R-HSA-181438 R-HSA-181438
## R-HSA-2243919 R-HSA-2243919
## R-HSA-8957275 R-HSA-8957275
## R-HSA-445989 R-HSA-445989
## R-HSA-390450 R-HSA-390450
## R-HSA-69275 R-HSA-69275
## R-HSA-201681 R-HSA-201681
## R-HSA-419037 R-HSA-419037
## R-HSA-5689880 R-HSA-5689880
## R-HSA-5619115 R-HSA-5619115
## R-HSA-186797 R-HSA-186797
## R-HSA-917937 R-HSA-917937
## R-HSA-1630316 R-HSA-1630316
## R-HSA-166016 R-HSA-166016
## R-HSA-6783783 R-HSA-6783783
## R-HSA-5688426 R-HSA-5688426
## R-HSA-381426 R-HSA-381426
## R-HSA-69239 R-HSA-69239
## R-HSA-3000178 R-HSA-3000178
## Description
## R-HSA-351202 Metabolism of polyamines
## R-HSA-1428517 The citric acid (TCA) cycle and respiratory electron transport
## R-HSA-350562 Regulation of ornithine decarboxylase (ODC)
## R-HSA-5676590 NIK-->noncanonical NF-kB signaling
## R-HSA-9020702 Interleukin-1 signaling
## R-HSA-5607761 Dectin-1 mediated noncanonical NF-kB signaling
## R-HSA-1169091 Activation of NF-kappaB in B cells
## R-HSA-5362768 Hh mutants are degraded by ERAD
## R-HSA-163200 Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
## R-HSA-69541 Stabilization of p53
## R-HSA-1236978 Cross-presentation of soluble exogenous antigens (endosomes)
## R-HSA-180534 Vpu mediated degradation of CD4
## R-HSA-349425 Autodegradation of the E3 ubiquitin ligase COP1
## R-HSA-69601 Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
## R-HSA-69610 p53-Independent DNA Damage Response
## R-HSA-69613 p53-Independent G1/S DNA damage checkpoint
## R-HSA-9762114 GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2
## R-HSA-1234176 Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
## R-HSA-1234174 Cellular response to hypoxia
## R-HSA-449147 Signaling by Interleukins
## R-HSA-211733 Regulation of activated PAK-2p34 by proteasome mediated degradation
## R-HSA-5678895 Defective CFTR causes cystic fibrosis
## R-HSA-5387390 Hh mutants abrogate ligand secretion
## R-HSA-180585 Vif-mediated degradation of APOBEC3G
## R-HSA-8854050 FBXL7 down-regulates AURKA during mitotic entry and in early mitosis
## R-HSA-9604323 Negative regulation of NOTCH4 signaling
## R-HSA-5610785 GLI3 is processed to GLI3R by the proteasome
## R-HSA-69563 p53-Dependent G1 DNA Damage Response
## R-HSA-69580 p53-Dependent G1/S DNA damage checkpoint
## R-HSA-75815 Ubiquitin-dependent degradation of Cyclin D
## R-HSA-174113 SCF-beta-TrCP mediated degradation of Emi1
## R-HSA-4641257 Degradation of AXIN
## R-HSA-8941858 Regulation of RUNX3 expression and activity
## R-HSA-5668541 TNFR2 non-canonical NF-kB pathway
## R-HSA-169911 Regulation of Apoptosis
## R-HSA-450408 AUF1 (hnRNP D0) binds and destabilizes mRNA
## R-HSA-1168372 Downstream signaling events of B Cell Receptor (BCR)
## R-HSA-195253 Degradation of beta-catenin by the destruction complex
## R-HSA-5358346 Hedgehog ligand biogenesis
## R-HSA-69615 G1/S DNA Damage Checkpoints
## R-HSA-4641258 Degradation of DVL
## R-HSA-187577 SCF(Skp2)-mediated degradation of p27/p21
## R-HSA-5610780 Degradation of GLI1 by the proteasome
## R-HSA-5610783 Degradation of GLI2 by the proteasome
## R-HSA-5607764 CLEC7A (Dectin-1) signaling
## R-HSA-2871837 FCERI mediated NF-kB activation
## R-HSA-174084 Autodegradation of Cdh1 by Cdh1:APC/C
## R-HSA-4608870 Asymmetric localization of PCP proteins
## R-HSA-611105 Respiratory electron transport
## R-HSA-1236974 ER-Phagosome pathway
## R-HSA-446652 Interleukin-1 family signaling
## R-HSA-5619084 ABC transporter disorders
## R-HSA-8939902 Regulation of RUNX2 expression and activity
## R-HSA-174154 APC/C:Cdc20 mediated degradation of Securin
## R-HSA-5658442 Regulation of RAS by GAPs
## R-HSA-450531 Regulation of mRNA stability by proteins that bind AU-rich elements
## R-HSA-69017 CDK-mediated phosphorylation and removal of Cdc6
## R-HSA-69202 Cyclin E associated events during G1/S transition
## R-HSA-983705 Signaling by the B Cell Receptor (BCR)
## R-HSA-1236975 Antigen processing-Cross presentation
## R-HSA-69656 Cyclin A:Cdk2-associated events at S phase entry
## R-HSA-8948751 Regulation of PTEN stability and activity
## R-HSA-9759194 Nuclear events mediated by NFE2L2
## R-HSA-174184 Cdc20:Phospho-APC/C mediated degradation of Cyclin A
## R-HSA-1474290 Collagen formation
## R-HSA-174178 APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
## R-HSA-179419 APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint
## R-HSA-202424 Downstream TCR signaling
## R-HSA-9755511 KEAP1-NFE2L2 pathway
## R-HSA-5632684 Hedgehog 'on' state
## R-HSA-9013694 Signaling by NOTCH4
## R-HSA-5687128 MAPK6/MAPK4 signaling
## R-HSA-8878159 Transcriptional regulation by RUNX3
## R-HSA-176409 APC/C:Cdc20 mediated degradation of mitotic proteins
## R-HSA-176814 Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins
## R-HSA-9711123 Cellular response to chemical stress
## R-HSA-176408 Regulation of APC/C activators between G1/S and early anaphase
## R-HSA-68949 Orc1 removal from chromatin
## R-HSA-5357801 Programmed Cell Death
## R-HSA-202403 TCR signaling
## R-HSA-6799198 Complex I biogenesis
## R-HSA-109581 Apoptosis
## R-HSA-4086400 PCP/CE pathway
## R-HSA-2022090 Assembly of collagen fibrils and other multimeric structures
## R-HSA-5689603 UCH proteinases
## R-HSA-8852276 The role of GTSE1 in G2/M progression after G2 checkpoint
## R-HSA-174143 APC/C-mediated degradation of cell cycle proteins
## R-HSA-453276 Regulation of mitotic cell cycle
## R-HSA-382556 ABC-family proteins mediated transport
## R-HSA-1650814 Collagen biosynthesis and modifying enzymes
## R-HSA-69052 Switching of origins to a post-replicative state
## R-HSA-5684996 MAPK1/MAPK3 signaling
## R-HSA-3000157 Laminin interactions
## R-HSA-5673001 RAF/MAP kinase cascade
## R-HSA-1268020 Mitochondrial protein import
## R-HSA-168142 Toll Like Receptor 10 (TLR10) Cascade
## R-HSA-168176 Toll Like Receptor 5 (TLR5) Cascade
## R-HSA-975871 MyD88 cascade initiated on plasma membrane
## R-HSA-5683057 MAPK family signaling cascades
## R-HSA-168164 Toll Like Receptor 3 (TLR3) Cascade
## R-HSA-8878166 Transcriptional regulation by RUNX2
## R-HSA-1474244 Extracellular matrix organization
## R-HSA-166166 MyD88-independent TLR4 cascade
## R-HSA-937061 TRIF(TICAM1)-mediated TLR4 signaling
## R-HSA-5621481 C-type lectin receptors (CLRs)
## R-HSA-2454202 Fc epsilon receptor (FCERI) signaling
## R-HSA-1257604 PIP3 activates AKT signaling
## R-HSA-5610787 Hedgehog 'off' state
## R-HSA-1442490 Collagen degradation
## R-HSA-157118 Signaling by NOTCH
## R-HSA-162909 Host Interactions of HIV factors
## R-HSA-5663202 Diseases of signal transduction by growth factor receptors and second messengers
## R-HSA-8949613 Cristae formation
## R-HSA-8948216 Collagen chain trimerization
## R-HSA-975138 TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
## R-HSA-1474228 Degradation of the extracellular matrix
## R-HSA-975155 MyD88 dependent cascade initiated on endosome
## R-HSA-168181 Toll Like Receptor 7/8 (TLR7/8) Cascade
## R-HSA-450294 MAP kinase activation
## R-HSA-163210 Formation of ATP by chemiosmotic coupling
## R-HSA-6807070 PTEN Regulation
## R-HSA-453279 Mitotic G1 phase and G1/S transition
## R-HSA-5358351 Signaling by Hedgehog
## R-HSA-71387 Metabolism of carbohydrates
## R-HSA-168138 Toll Like Receptor 9 (TLR9) Cascade
## R-HSA-3858494 Beta-catenin independent WNT signaling
## R-HSA-70263 Gluconeogenesis
## R-HSA-8939236 RUNX1 regulates transcription of genes involved in differentiation of HSCs
## R-HSA-69206 G1/S Transition
## R-HSA-448424 Interleukin-17 signaling
## R-HSA-9006925 Intracellular signaling by second messengers
## R-HSA-166058 MyD88:MAL(TIRAP) cascade initiated on plasma membrane
## R-HSA-168188 Toll Like Receptor TLR6:TLR2 Cascade
## R-HSA-71406 Pyruvate metabolism and Citric Acid (TCA) cycle
## R-HSA-453274 Mitotic G2-G2/M phases
## R-HSA-2214320 Anchoring fibril formation
## R-HSA-1638074 Keratan sulfate/keratin metabolism
## R-HSA-5628897 TP53 Regulates Metabolic Genes
## R-HSA-168179 Toll Like Receptor TLR1:TLR2 Cascade
## R-HSA-181438 Toll Like Receptor 2 (TLR2) Cascade
## R-HSA-2243919 Crosslinking of collagen fibrils
## R-HSA-8957275 Post-translational protein phosphorylation
## R-HSA-445989 TAK1-dependent IKK and NF-kappa-B activation
## R-HSA-390450 Folding of actin by CCT/TriC
## R-HSA-69275 G2/M Transition
## R-HSA-201681 TCF dependent signaling in response to WNT
## R-HSA-419037 NCAM1 interactions
## R-HSA-5689880 Ub-specific processing proteases
## R-HSA-5619115 Disorders of transmembrane transporters
## R-HSA-186797 Signaling by PDGF
## R-HSA-917937 Iron uptake and transport
## R-HSA-1630316 Glycosaminoglycan metabolism
## R-HSA-166016 Toll Like Receptor 4 (TLR4) Cascade
## R-HSA-6783783 Interleukin-10 signaling
## R-HSA-5688426 Deubiquitination
## R-HSA-381426 Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
## R-HSA-69239 Synthesis of DNA
## R-HSA-3000178 ECM proteoglycans
## GeneRatio BgRatio pvalue p.adjust qvalue
## R-HSA-351202 38/1933 59/10891 2.252835e-15 3.356725e-12 2.881258e-12
## R-HSA-1428517 76/1933 178/10891 4.892925e-15 3.645229e-12 3.128897e-12
## R-HSA-350562 34/1933 51/10891 1.454711e-14 6.741519e-12 5.786610e-12
## R-HSA-5676590 37/1933 59/10891 1.851969e-14 6.741519e-12 5.786610e-12
## R-HSA-9020702 56/1933 115/10891 2.262255e-14 6.741519e-12 5.786610e-12
## R-HSA-5607761 37/1933 60/10891 4.010768e-14 9.960074e-12 8.549268e-12
## R-HSA-1169091 38/1933 67/10891 7.720691e-13 1.551794e-10 1.331989e-10
## R-HSA-5362768 34/1933 56/10891 8.331782e-13 1.551794e-10 1.331989e-10
## R-HSA-163200 57/1933 127/10891 1.052214e-12 1.741998e-10 1.495251e-10
## R-HSA-69541 34/1933 57/10891 1.714764e-12 2.042224e-10 1.752951e-10
## R-HSA-1236978 31/1933 49/10891 1.772616e-12 2.042224e-10 1.752951e-10
## R-HSA-180534 32/1933 52/10891 2.330054e-12 2.042224e-10 1.752951e-10
## R-HSA-349425 32/1933 52/10891 2.330054e-12 2.042224e-10 1.752951e-10
## R-HSA-69601 32/1933 52/10891 2.330054e-12 2.042224e-10 1.752951e-10
## R-HSA-69610 32/1933 52/10891 2.330054e-12 2.042224e-10 1.752951e-10
## R-HSA-69613 32/1933 52/10891 2.330054e-12 2.042224e-10 1.752951e-10
## R-HSA-9762114 32/1933 52/10891 2.330054e-12 2.042224e-10 1.752951e-10
## R-HSA-1234176 37/1933 66/10891 2.512352e-12 2.079669e-10 1.785092e-10
## R-HSA-1234174 40/1933 75/10891 2.861399e-12 2.243939e-10 1.926094e-10
## R-HSA-449147 144/1933 473/10891 3.787065e-12 2.661909e-10 2.284860e-10
## R-HSA-211733 31/1933 50/10891 3.875229e-12 2.661909e-10 2.284860e-10
## R-HSA-5678895 35/1933 61/10891 3.930335e-12 2.661909e-10 2.284860e-10
## R-HSA-5387390 34/1933 59/10891 6.745370e-12 4.369827e-10 3.750858e-10
## R-HSA-180585 32/1933 54/10891 9.959822e-12 5.707744e-10 4.899265e-10
## R-HSA-8854050 32/1933 54/10891 9.959822e-12 5.707744e-10 4.899265e-10
## R-HSA-9604323 32/1933 54/10891 9.959822e-12 5.707744e-10 4.899265e-10
## R-HSA-5610785 34/1933 60/10891 1.292819e-11 7.134443e-10 6.123878e-10
## R-HSA-69563 36/1933 66/10891 1.476023e-11 7.583704e-10 6.509503e-10
## R-HSA-69580 36/1933 66/10891 1.476023e-11 7.583704e-10 6.509503e-10
## R-HSA-75815 31/1933 52/10891 1.688876e-11 8.388083e-10 7.199944e-10
## R-HSA-174113 32/1933 55/10891 1.978499e-11 8.933221e-10 7.667866e-10
## R-HSA-4641257 32/1933 55/10891 1.978499e-11 8.933221e-10 7.667866e-10
## R-HSA-8941858 32/1933 55/10891 1.978499e-11 8.933221e-10 7.667866e-10
## R-HSA-5668541 47/1933 102/10891 3.298443e-11 1.439061e-09 1.235224e-09
## R-HSA-169911 31/1933 53/10891 3.380346e-11 1.439061e-09 1.235224e-09
## R-HSA-450408 32/1933 56/10891 3.835092e-11 1.513566e-09 1.299175e-09
## R-HSA-1168372 41/1933 83/10891 3.860102e-11 1.513566e-09 1.299175e-09
## R-HSA-195253 41/1933 83/10891 3.860102e-11 1.513566e-09 1.299175e-09
## R-HSA-5358346 35/1933 65/10891 4.618538e-11 1.741356e-09 1.494700e-09
## R-HSA-69615 36/1933 68/10891 4.674782e-11 1.741356e-09 1.494700e-09
## R-HSA-4641258 32/1933 57/10891 7.264206e-11 2.625066e-09 2.253236e-09
## R-HSA-187577 33/1933 60/10891 7.751872e-11 2.625066e-09 2.253236e-09
## R-HSA-5610780 33/1933 60/10891 7.751872e-11 2.625066e-09 2.253236e-09
## R-HSA-5610783 33/1933 60/10891 7.751872e-11 2.625066e-09 2.253236e-09
## R-HSA-5607764 46/1933 101/10891 8.749656e-11 2.897108e-09 2.486744e-09
## R-HSA-2871837 40/1933 82/10891 1.095871e-10 3.549668e-09 3.046872e-09
## R-HSA-174084 34/1933 64/10891 1.426516e-10 4.428143e-09 3.800914e-09
## R-HSA-4608870 34/1933 64/10891 1.426516e-10 4.428143e-09 3.800914e-09
## R-HSA-611105 46/1933 103/10891 1.983886e-10 6.032632e-09 5.178133e-09
## R-HSA-1236974 42/1933 90/10891 2.229993e-10 6.645378e-09 5.704086e-09
## R-HSA-446652 60/1933 153/10891 2.508187e-10 7.327840e-09 6.289880e-09
## R-HSA-5619084 38/1933 78/10891 3.358445e-10 9.623236e-09 8.260143e-09
## R-HSA-8939902 36/1933 73/10891 6.364194e-10 1.789179e-08 1.535749e-08
## R-HSA-174154 34/1933 68/10891 1.192777e-09 3.231341e-08 2.773634e-08
## R-HSA-5658442 34/1933 68/10891 1.192777e-09 3.231341e-08 2.773634e-08
## R-HSA-450531 40/1933 88/10891 1.585559e-09 4.218719e-08 3.621154e-08
## R-HSA-69017 35/1933 73/10891 2.876015e-09 7.518005e-08 6.453109e-08
## R-HSA-69202 38/1933 83/10891 3.152206e-09 8.097908e-08 6.950871e-08
## R-HSA-983705 46/1933 112/10891 5.509100e-09 1.391281e-07 1.194212e-07
## R-HSA-1236975 44/1933 105/10891 5.636512e-09 1.399734e-07 1.201467e-07
## R-HSA-69656 38/1933 85/10891 7.180521e-09 1.753931e-07 1.505493e-07
## R-HSA-8948751 33/1933 69/10891 8.800883e-09 2.115051e-07 1.815462e-07
## R-HSA-9759194 36/1933 79/10891 9.529710e-09 2.253852e-07 1.934603e-07
## R-HSA-174184 34/1933 73/10891 1.231691e-08 2.867530e-07 2.461356e-07
## R-HSA-1474290 39/1933 90/10891 1.339237e-08 3.069944e-07 2.635099e-07
## R-HSA-174178 34/1933 74/10891 1.893299e-08 4.210472e-07 3.614075e-07
## R-HSA-179419 34/1933 74/10891 1.893299e-08 4.210472e-07 3.614075e-07
## R-HSA-202424 41/1933 98/10891 1.964094e-08 4.303677e-07 3.694078e-07
## R-HSA-9755511 42/1933 102/10891 2.310106e-08 4.988489e-07 4.281889e-07
## R-HSA-5632684 37/1933 85/10891 2.715468e-08 5.780067e-07 4.961344e-07
## R-HSA-9013694 36/1933 82/10891 3.187427e-08 6.689107e-07 5.741621e-07
## R-HSA-5687128 38/1933 89/10891 3.338974e-08 6.832084e-07 5.864346e-07
## R-HSA-8878159 40/1933 96/10891 3.347262e-08 6.832084e-07 5.864346e-07
## R-HSA-176409 34/1933 76/10891 4.327137e-08 8.712749e-07 7.478622e-07
## R-HSA-176814 34/1933 77/10891 6.438983e-08 1.279211e-06 1.098016e-06
## R-HSA-9711123 65/1933 194/10891 7.293272e-08 1.429865e-06 1.227330e-06
## R-HSA-176408 35/1933 81/10891 8.047778e-08 1.557297e-06 1.336712e-06
## R-HSA-68949 32/1933 71/10891 8.679957e-08 1.658094e-06 1.423232e-06
## R-HSA-5357801 68/1933 210/10891 1.625374e-07 3.065579e-06 2.631352e-06
## R-HSA-202403 45/1933 120/10891 2.035158e-07 3.790482e-06 3.253575e-06
## R-HSA-6799198 27/1933 57/10891 2.527133e-07 4.648677e-06 3.990210e-06
## R-HSA-109581 60/1933 180/10891 2.818429e-07 5.121292e-06 4.395881e-06
## R-HSA-4086400 37/1933 92/10891 3.202369e-07 5.748831e-06 4.934531e-06
## R-HSA-2022090 28/1933 61/10891 3.462093e-07 6.141094e-06 5.271232e-06
## R-HSA-5689603 39/1933 102/10891 7.317025e-07 1.282631e-05 1.100952e-05
## R-HSA-8852276 32/1933 77/10891 8.340910e-07 1.445111e-05 1.240417e-05
## R-HSA-174143 35/1933 88/10891 9.073767e-07 1.536354e-05 1.318735e-05
## R-HSA-453276 35/1933 88/10891 9.073767e-07 1.536354e-05 1.318735e-05
## R-HSA-382556 39/1933 103/10891 9.783749e-07 1.633986e-05 1.402538e-05
## R-HSA-1650814 29/1933 67/10891 9.869712e-07 1.633986e-05 1.402538e-05
## R-HSA-69052 36/1933 92/10891 1.012787e-06 1.658299e-05 1.423407e-05
## R-HSA-5684996 83/1933 286/10891 1.414931e-06 2.291573e-05 1.966981e-05
## R-HSA-3000157 17/1933 30/10891 1.841470e-06 2.950312e-05 2.532412e-05
## R-HSA-5673001 81/1933 280/10891 2.171151e-06 3.441505e-05 2.954029e-05
## R-HSA-1268020 27/1933 64/10891 4.214120e-06 6.609515e-05 5.673303e-05
## R-HSA-168142 36/1933 97/10891 4.352311e-06 6.617289e-05 5.679976e-05
## R-HSA-168176 36/1933 97/10891 4.352311e-06 6.617289e-05 5.679976e-05
## R-HSA-975871 36/1933 97/10891 4.352311e-06 6.617289e-05 5.679976e-05
## R-HSA-5683057 90/1933 325/10891 4.487651e-06 6.754142e-05 5.797444e-05
## R-HSA-168164 38/1933 105/10891 4.797790e-06 7.148707e-05 6.136121e-05
## R-HSA-8878166 42/1933 121/10891 5.317896e-06 7.845212e-05 6.733969e-05
## R-HSA-1474244 84/1933 300/10891 5.843538e-06 8.536149e-05 7.327037e-05
## R-HSA-166166 39/1933 110/10891 6.403986e-06 9.174941e-05 7.875347e-05
## R-HSA-937061 39/1933 110/10891 6.403986e-06 9.174941e-05 7.875347e-05
## R-HSA-5621481 47/1933 142/10891 6.651777e-06 9.439188e-05 8.102164e-05
## R-HSA-2454202 45/1933 134/10891 6.767905e-06 9.513376e-05 8.165844e-05
## R-HSA-1257604 76/1933 267/10891 8.482659e-06 1.181230e-04 1.013913e-04
## R-HSA-5610787 39/1933 113/10891 1.327904e-05 1.832015e-04 1.572518e-04
## R-HSA-1442490 26/1933 64/10891 1.435475e-05 1.962254e-04 1.684309e-04
## R-HSA-157118 68/1933 236/10891 1.613624e-05 2.185727e-04 1.876127e-04
## R-HSA-162909 43/1933 130/10891 1.648408e-05 2.212728e-04 1.899304e-04
## R-HSA-5663202 111/1933 433/10891 1.791568e-05 2.383426e-04 2.045823e-04
## R-HSA-8949613 16/1933 31/10891 1.847429e-05 2.435991e-04 2.090942e-04
## R-HSA-8948216 20/1933 44/10891 1.960413e-05 2.562294e-04 2.199356e-04
## R-HSA-975138 36/1933 103/10891 2.059175e-05 2.667974e-04 2.290066e-04
## R-HSA-1474228 45/1933 140/10891 2.401609e-05 3.084826e-04 2.647873e-04
## R-HSA-975155 36/1933 104/10891 2.618731e-05 3.334966e-04 2.862581e-04
## R-HSA-168181 36/1933 105/10891 3.313803e-05 4.184378e-04 3.591678e-04
## R-HSA-450294 25/1933 64/10891 4.596005e-05 5.754662e-04 4.939537e-04
## R-HSA-163210 11/1933 18/10891 4.996433e-05 6.203905e-04 5.325146e-04
## R-HSA-6807070 44/1933 140/10891 5.412980e-05 6.665571e-04 5.721419e-04
## R-HSA-453279 46/1933 149/10891 6.047533e-05 7.285017e-04 6.253123e-04
## R-HSA-5358351 46/1933 149/10891 6.047533e-05 7.285017e-04 6.253123e-04
## R-HSA-71387 79/1933 295/10891 6.062699e-05 7.285017e-04 6.253123e-04
## R-HSA-168138 36/1933 108/10891 6.524917e-05 7.777700e-04 6.676020e-04
## R-HSA-3858494 45/1933 146/10891 7.561100e-05 8.941300e-04 7.674800e-04
## R-HSA-70263 16/1933 34/10891 7.915931e-05 9.287194e-04 7.971700e-04
## R-HSA-8939236 41/1933 130/10891 8.788486e-05 1.023035e-03 8.781258e-04
## R-HSA-69206 41/1933 131/10891 1.063478e-04 1.228358e-03 1.054366e-03
## R-HSA-448424 26/1933 72/10891 1.527232e-04 1.750443e-03 1.502500e-03
## R-HSA-9006925 80/1933 309/10891 1.842544e-04 2.068323e-03 1.775354e-03
## R-HSA-166058 36/1933 113/10891 1.846222e-04 2.068323e-03 1.775354e-03
## R-HSA-168188 36/1933 113/10891 1.846222e-04 2.068323e-03 1.775354e-03
## R-HSA-71406 21/1933 55/10891 2.661422e-04 2.959343e-03 2.540163e-03
## R-HSA-453274 55/1933 198/10891 2.853757e-04 3.149702e-03 2.703559e-03
## R-HSA-2214320 9/1933 15/10891 3.061599e-04 3.354252e-03 2.879135e-03
## R-HSA-1638074 15/1933 34/10891 3.213750e-04 3.491535e-03 2.996973e-03
## R-HSA-5628897 29/1933 87/10891 3.238094e-04 3.491535e-03 2.996973e-03
## R-HSA-168179 36/1933 116/10891 3.280637e-04 3.491535e-03 2.996973e-03
## R-HSA-181438 36/1933 116/10891 3.280637e-04 3.491535e-03 2.996973e-03
## R-HSA-2243919 10/1933 18/10891 3.308079e-04 3.495771e-03 3.000609e-03
## R-HSA-8957275 34/1933 108/10891 3.533764e-04 3.707964e-03 3.182745e-03
## R-HSA-445989 18/1933 45/10891 3.697163e-04 3.852289e-03 3.306628e-03
## R-HSA-390450 7/1933 10/10891 3.989761e-04 4.128294e-03 3.543538e-03
## R-HSA-69275 54/1933 196/10891 4.020779e-04 4.131697e-03 3.546459e-03
## R-HSA-201681 62/1933 233/10891 4.350501e-04 4.439895e-03 3.811001e-03
## R-HSA-419037 17/1933 42/10891 4.537944e-04 4.599685e-03 3.948158e-03
## R-HSA-5689880 59/1933 220/10891 4.771871e-04 4.804113e-03 4.123629e-03
## R-HSA-5619115 49/1933 176/10891 5.642723e-04 5.642723e-03 4.843454e-03
## R-HSA-186797 21/1933 58/10891 6.151461e-04 6.069984e-03 5.210195e-03
## R-HSA-917937 21/1933 58/10891 6.151461e-04 6.069984e-03 5.210195e-03
## R-HSA-1630316 37/1933 124/10891 6.363939e-04 6.238335e-03 5.354700e-03
## R-HSA-166016 42/1933 146/10891 6.602820e-04 6.430198e-03 5.519385e-03
## R-HSA-6783783 18/1933 47/10891 6.881035e-04 6.657625e-03 5.714599e-03
## R-HSA-5688426 75/1933 298/10891 7.095250e-04 6.820595e-03 5.854485e-03
## R-HSA-381426 37/1933 125/10891 7.523142e-04 7.185566e-03 6.167758e-03
## R-HSA-69239 36/1933 121/10891 7.938456e-04 7.533948e-03 6.466794e-03
## R-HSA-3000178 25/1933 76/10891 1.012998e-03 9.552956e-03 8.199818e-03
## geneID
## R-HSA-351202 262/51582/4946/4947/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6303/54498/6723
## R-HSA-1428517 50/498/506/509/514/516/518/521/9551/10632/10476/522/80219/84987/51241/1327/9377/1329/1340/1345/1349/1350/54205/1737/81889/2739/2954/3029/3419/3939/3945/4191/4694/51079/4695/4696/4697/4701/4702/4704/4706/51103/91942/29078/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5162/8050/5163/5166/54704/9997/6389/6391/9123/8803/8801/10975/7384/7386/27089/7416
## R-HSA-350562 51582/4946/4947/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-5676590 1147/9020/4791/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/9040
## R-HSA-9020702 1147/8517/3656/51135/5604/5608/4215/1326/4790/4791/4792/4793/28511/64127/387522/57162/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-5607761 1147/9020/4791/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/9040
## R-HSA-1169091 1147/8517/4790/4792/4793/4794/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-5362768 51009/27248/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7415
## R-HSA-163200 498/506/509/514/516/518/521/9551/10632/10476/522/80219/84987/51241/1327/9377/1329/1340/1345/1349/1350/54205/4694/51079/4695/4696/4697/4701/4702/4704/4706/51103/91942/29078/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/9997/6389/6391/10975/7384/7386/27089
## R-HSA-69541 472/11200/51230/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-1236978 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-180534 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-349425 472/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-69601 11200/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-69610 11200/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-69613 11200/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-9762114 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-1234176 84962/54583/112399/6921/2034/3091/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-1234174 84962/768/10370/54583/112399/6921/2034/3091/25994/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-449147 375/466/10538/598/552900/6356/6347/6364/6348/6352/1052/1147/23529/1385/1435/1437/1440/1489/2919/3627/2920/3576/1845/1846/2162/2353/2308/2534/2625/9446/3055/3091/3383/163702/8517/3587/3588/3589/3590/3600/3601/3603/132014/51561/55801/90865/3563/3569/3574/3575/3656/51135/3667/3688/3929/3934/3965/3976/4128/5604/5606/5608/4215/1326/5600/9261/4205/4208/4282/4312/4314/4790/4791/4792/4793/28511/64127/4843/9180/5034/27250/387522/57162/5291/5293/8503/5516/5519/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5743/5781/5783/26469/5898/8767/6095/6288/6500/6648/6655/6772/6775/6777/23118/6888/6950/92610/7133/7186/7334/9097/11274/7431/6935
## R-HSA-211733 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-5678895 79139/51009/27248/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7415
## R-HSA-5387390 51009/27248/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7415
## R-HSA-180585 6921/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-8854050 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-9604323 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-5610785 2737/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/51684
## R-HSA-69563 472/898/11200/51230/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/25946
## R-HSA-69580 472/898/11200/51230/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/25946
## R-HSA-75815 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-174113 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-4641257 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/8658
## R-HSA-8941858 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/57154
## R-HSA-5668541 330/1147/9020/4791/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/4982/7133/943/3604/8742/8740/8744/7186/7187/9040
## R-HSA-169911 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-450408 3315/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-1168372 1147/2280/8517/4772/4790/4792/4793/4794/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/10125/6500
## R-HSA-195253 3065/5516/5519/5525/5526/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/6934/7088/7089/166
## R-HSA-5358346 51009/27248/5034/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7415
## R-HSA-69615 472/898/11200/51230/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/25946
## R-HSA-4641258 23072/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-187577 898/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-5610780 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/51684
## R-HSA-5610783 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/51684
## R-HSA-5607764 10768/1147/8517/9020/4772/4790/4791/4792/387522/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/23118/9040/7334
## R-HSA-2871837 1147/8517/4790/4792/387522/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/10125/6500/23118/7334
## R-HSA-174084 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-4608870 50855/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/57154/7474
## R-HSA-611105 80219/84987/51241/1327/9377/1329/1340/1345/1349/1350/54205/4694/51079/4695/4696/4697/4701/4702/4704/4706/51103/91942/29078/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/9997/6389/6391/10975/7384/7386/27089
## R-HSA-1236974 567/1147/3105/8517/2923/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/9554/10952/23480/6890/6891/6892
## R-HSA-446652 1147/8517/90865/3656/51135/5604/5608/4215/1326/4790/4791/4792/4793/28511/64127/387522/57162/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5781/5783/26469/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-5619084 19/21/5826/79139/51009/27248/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7415
## R-HSA-8939902 650/2908/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/57154/6772
## R-HSA-174154 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-5658442 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5921/22821/10156
## R-HSA-450531 23404/54512/5393/3315/5600/9261/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7538/677
## R-HSA-69017 29945/898/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-69202 91768/898/902/1874/91750/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7465
## R-HSA-983705 10768/974/1147/2280/2534/8517/4772/4790/4792/4793/4794/84876/5293/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/10125/6500
## R-HSA-1236975 567/1147/1520/3105/8517/3685/2923/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/9554/10952/23480/6890/6891/6892
## R-HSA-69656 91768/898/902/1874/91750/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7465
## R-HSA-8948751 1459/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/8658
## R-HSA-9759194 2936/7975/5052/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/6888
## R-HSA-174184 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-1474290 9509/649/1302/1303/1306/80781/81578/169044/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/23127/1520/3909/3914/3918/4015/84695/84171/4314/5033/283208/5034/5118/5339/5351/5352/7837
## R-HSA-174178 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-179419 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-202424 1147/8517/4790/4792/387522/5291/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/8767/6500/23118/7334
## R-HSA-9755511 1459/2936/7975/79594/5052/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/83667/6500/6888/7353/7415
## R-HSA-5632684 132884/2619/2737/23432/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/57154/51684
## R-HSA-9013694 10046/23385/5663/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/22938
## R-HSA-5687128 896/2118/2308/3315/8997/4343/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/989
## R-HSA-8878159 9759/10046/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/57154/22938/6696/6934/7003/8463/10413
## R-HSA-176409 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-176814 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7324
## R-HSA-9711123 475/84987/51241/1327/9377/1329/1340/1345/1349/1350/1459/54205/30001/2936/2950/85441/81502/7975/79594/4697/5034/5052/7001/10935/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/9997/83667/6500/6648/6888/7295/25828/7353/7415
## R-HSA-176408 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7324
## R-HSA-68949 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500
## R-HSA-5357801 118/51074/26060/57099/578/598/637/330/90427/708/8837/128866/54205/23604/140735/1991/8772/355/10211/2934/3006/3659/3660/4000/8473/57162/5339/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6093/7082/9414/8795/8743/7186/55075/7431/7532
## R-HSA-202403 1147/55740/2533/8517/4790/4792/387522/5291/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5795/8767/6500/23118/7334/7454
## R-HSA-6799198 4694/51079/4695/4696/4701/4702/4704/4706/51103/91942/29078/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729
## R-HSA-109581 118/51074/26060/57099/578/598/637/90427/708/8837/54205/23604/140735/8772/355/2934/3006/4000/5339/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6093/7082/9414/8795/8743/7186/55075/7431/7532
## R-HSA-4086400 1211/23002/50855/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/387/57154/7474
## R-HSA-2022090 649/1302/1303/1306/80781/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/1520/3909/3914/3918/4015/84695/84171/4314/5118/5339/7837
## R-HSA-5689603 11047/723790/83444/221656/4738/8473/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/29844/7046
## R-HSA-8852276 5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/347733
## R-HSA-174143 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7324
## R-HSA-453276 29945/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7324
## R-HSA-382556 20/21/10057/79139/51009/1965/27248/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/7415
## R-HSA-1650814 9509/649/1302/1303/1306/80781/81578/169044/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/23127/5033/283208/5034/5118/5351/5352
## R-HSA-69052 29945/898/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7324
## R-HSA-5684996 51104/284/369/402/598/815/817/22866/1437/1843/80824/1846/1847/2064/2255/8822/8817/2252/2254/2263/2261/2534/2674/2675/54756/3563/3569/8826/3667/4254/8844/283455/5604/4684/9542/4902/5245/5291/5516/5519/5525/5526/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5781/5921/22821/10156/221002/10125/5863/57139/6710/51332
## R-HSA-3000157 80781/1282/1284/1285/1286/1294/3672/3685/3688/3908/3909/3910/3912/3914/3915/3918/22795
## R-HSA-5673001 51104/284/369/402/598/815/817/22866/1437/1843/80824/1846/1847/2064/2255/8822/8817/2252/2254/2263/2261/2534/2674/2675/54756/3563/8826/3667/4254/8844/283455/5604/4684/9542/4902/5245/5291/5516/5519/5525/5526/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5921/22821/10156/221002/10125/5863/57139/6710/51332
## R-HSA-1268020 50/498/506/516/51142/54927/56942/51287/388753/10063/80273/150274/197257/10651/4714/25813/26515/26517/10440/29090/29928/100287932/26521/10452/401505/54543/7416
## R-HSA-168142 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-168176 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-975871 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-5683057 51104/284/369/402/598/815/817/896/22866/1437/1843/80824/1846/1847/2064/2118/2255/8822/8817/2252/2254/2263/2261/2308/2534/2674/2675/3315/54756/3563/3569/8826/3667/8997/4254/8844/283455/5604/4343/4684/9542/4902/5245/5291/5516/5519/5525/5526/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5781/5921/22821/10156/221002/10125/5863/57139/989/6710/51332
## R-HSA-168164 466/330/1147/1385/1845/1846/8772/2353/8517/3656/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/5516/5519/8767/6288/23098/6500/23118/92610/7186/7187/7334/9097/11274
## R-HSA-8878166 25/650/2737/9759/4094/2908/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/57154/6662/6772/10413
## R-HSA-1474244 176/9510/9509/375790/633/649/650/147968/825/1302/1303/1306/80781/81578/169044/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/23127/1513/1520/780/2202/1991/2200/2201/5045/3383/3672/8515/22801/3682/3685/3688/3791/3908/3909/3910/3912/3914/3915/3918/4015/84695/84171/4052/4060/8076/4312/4319/4321/10893/64386/4314/4684/23385/22795/5033/283208/5034/5118/85007/5339/5351/5352/5663/7837/6696/7042/7043/7077/7148/51399
## R-HSA-166166 466/330/1147/1385/1845/1846/8772/2353/8517/3656/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/5516/5519/5781/8767/6288/23098/6500/23118/92610/7186/7187/7334/9097/11274
## R-HSA-937061 466/330/1147/1385/1845/1846/8772/2353/8517/3656/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/5516/5519/5781/8767/6288/23098/6500/23118/92610/7186/7187/7334/9097/11274
## R-HSA-5621481 10768/1147/2534/8517/9020/4772/4790/4791/4792/387522/5580/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/23118/9040/7334
## R-HSA-2454202 10768/1147/2353/2534/8517/4772/4790/4792/387522/5291/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/10125/6500/23118/7334
## R-HSA-1257604 84335/1147/1385/1459/8726/1958/2064/2255/8822/8817/2252/2254/2263/2261/2308/2534/2549/3065/10014/8870/90865/51135/3667/4254/55004/10542/79109/4343/2475/9542/1912/80012/23239/5291/5293/8503/5516/5519/5525/5526/55615/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5781/57167/8658/57761
## R-HSA-5610787 2737/23432/27152/54903/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/51684/347733/7289
## R-HSA-1442490 1302/1303/1306/80781/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/1513/1991/5045/4312/4319/4321/4314/85007
## R-HSA-157118 488/489/2683/1024/1385/92737/1871/1999/5045/723790/55766/8349/3017/8362/554313/3065/83933/9759/10014/3091/3955/10046/4242/4343/23385/23509/56983/5584/5663/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5986/6500/22938/6484/6772/7088/7089/23286
## R-HSA-162909 162/375/51606/567/6921/2534/3055/3105/11168/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5905/6500/292
## R-HSA-5663202 57085/84335/238/369/10533/471/9530/597/598/815/817/1024/1051/1147/22866/1385/51009/80824/2064/27248/2255/8822/8817/2252/2254/2263/2261/81608/2280/2308/8087/2534/2549/3065/83933/9759/10014/8826/3667/3791/4254/8844/283455/4000/4008/9208/10046/5604/79109/2475/399687/23385/9542/9061/5245/5291/5293/8503/5435/5440/64840/8496/5516/5519/5525/5526/55615/5663/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5781/9444/22872/6500/22938/6772/6777/6934/10342/7046/8658/7415
## R-HSA-8949613 79135/498/506/509/514/516/518/521/9551/10632/10476/522/54927/440574/10651/25813
## R-HSA-8948216 1302/1303/1306/80781/81578/169044/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299
## R-HSA-975138 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-1474228 176/9510/649/147968/825/1302/1303/1306/80781/84570/136227/1280/1281/1282/1284/1285/1286/1290/1294/1296/1297/1298/1299/1513/1520/1991/2200/2201/5045/3909/3912/3914/3915/3918/4312/4319/4321/10893/64386/4314/23385/85007/5663/6696/7077
## R-HSA-975155 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-168181 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-450294 466/1147/1385/1845/1846/2353/8517/3656/5604/5606/5608/1326/5600/9261/4205/4208/4790/64127/387522/5516/5519/8767/6500/23118/7334
## R-HSA-163210 498/506/509/514/516/518/521/9551/10632/10476/522
## R-HSA-6807070 1459/8726/1958/3065/10014/55004/10542/4343/2475/1912/80012/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/57167/8658
## R-HSA-453279 25/91768/896/898/902/1021/1030/1871/1874/3065/91750/5516/5519/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7465
## R-HSA-5358351 51009/27248/132884/2619/2737/23432/27152/54903/5034/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/57154/51684/347733/7289/7415
## R-HSA-71387 10057/176/83440/375790/231/226/8708/8707/10678/93010/2683/8702/9334/11041/633/11261/54480/55501/9435/23563/56548/55790/1464/29940/92126/2023/2026/2132/170384/92579/2588/2597/26035/2799/2239/2821/2997/3038/3074/3099/9955/9394/8692/3795/4060/4125/4190/4191/9061/9060/5091/5105/5106/5210/5211/5214/5223/5224/5230/283209/5255/5256/5260/5261/5315/5507/5516/5519/8402/6513/347734/6652/6482/6484/6888/26007/7167/7360/10090
## R-HSA-168138 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-3858494 815/1211/23002/59345/10681/2791/2788/4343/4772/50855/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/387/57154/6934/7474
## R-HSA-70263 226/2023/2026/92579/2597/2821/4190/4191/5091/5105/5106/5223/5224/5230/8402/7167
## R-HSA-8939236 25/902/2625/723790/55766/8349/3017/8362/554313/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/10413
## R-HSA-69206 91768/898/902/1874/3065/91750/5516/5519/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7465
## R-HSA-448424 466/1147/1385/1845/1846/2353/8517/132014/3656/5604/5606/5608/1326/5600/9261/4205/4208/4790/64127/387522/5516/5519/8767/6500/23118/7334
## R-HSA-9006925 10768/84335/815/817/1147/1385/1459/8726/1958/2064/2255/8822/8817/2252/2254/2263/2261/2308/2534/2549/3065/10014/8870/90865/51135/3667/4254/55004/10542/79109/4343/2475/9542/1912/80012/23239/5291/5293/8503/5516/5519/5525/5526/5580/55615/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5781/57167/8658/57761
## R-HSA-166058 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-168188 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-71406 50/1737/81889/2739/2954/3029/3419/3939/3945/4191/5162/8050/5163/5166/54704/6389/6391/9123/8803/8801/7416
## R-HSA-453274 84962/902/984/22897/1453/1454/1871/54930/55559/91750/10133/5108/5116/22822/51400/4660/5516/5519/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/9814/6500/347733/85378/7465/7532
## R-HSA-2214320 649/1282/1284/1285/1286/1294/3909/3914/3918
## R-HSA-1638074 176/10678/93010/2683/8702/9334/11041/9435/23563/2588/2799/3074/4060/6482/6484
## R-HSA-5628897 84987/51241/1327/9377/1329/1340/1345/1349/1350/54205/54541/2744/2821/2936/55004/10542/4343/2475/4697/5052/7001/5563/51422/9997/83667/143686/57103/7295/7532
## R-HSA-168179 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-181438 466/1147/1385/1845/1846/2353/8517/3656/51135/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-2243919 649/1282/1284/1285/1286/4015/84695/84171/5118/7837
## R-HSA-8957275 174/718/813/1000/10970/1435/5611/2153/54757/2200/11167/10272/2519/2621/3487/3490/3569/3895/3912/3915/4052/4240/11320/375056/54587/5034/255738/5768/7857/51246/6696/8614/10618/54972
## R-HSA-445989 1147/8517/3656/4790/4791/4792/4793/28511/64127/387522/8767/6288/23118/92610/7186/7334/9097/11274
## R-HSA-390450 10576/7203/10575/22948/908/10574/6950
## R-HSA-69275 84962/902/984/22897/1453/1454/54930/55559/91750/10133/5108/5116/22822/51400/4660/5516/5519/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/9814/6500/347733/85378/7465/7532
## R-HSA-201681 283149/1454/1459/723790/55766/8349/3017/8362/554313/3065/23072/55366/8549/5516/5519/5525/5526/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5929/340419/84870/6422/6423/6659/6662/6934/7088/7089/8658/11197/7474/7483
## R-HSA-419037 375790/775/782/1280/1281/1282/1284/1285/1286/1290/1297/1298/1299/2674/2675/4684/4902
## R-HSA-5689880 11047/8678/330/1540/2625/723790/8349/3017/3091/8517/90865/79594/4792/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/51651/63891/79589/6478/10254/6881/7046/8658/7186/7353/9097/11274/29761/7416/7417
## R-HSA-5619115 19/21/5826/79139/51009/27248/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/4891/9990/6575/5172/6513/142680/10559/7355/55630/9056/285195/7415
## R-HSA-186797 1280/1281/1282/1284/1285/1286/1290/1297/1298/1299/5045/5291/5327/5781/5921/6696/6772/6777/7058/7059/7060
## R-HSA-917937 48/537/533/527/9114/8992/529/9296/9550/534/51606/79901/2495/10539/3934/57192/4738/6500/4891/10312/7037
## R-HSA-1630316 10057/176/375790/10678/93010/2683/8702/9334/11041/633/11261/54480/55501/9435/23563/56548/55790/1464/29940/92126/2132/2588/26035/2799/2239/3038/3074/9955/9394/8692/4060/9061/9060/347734/6482/6484/10090
## R-HSA-166016 466/330/1147/1385/1845/1846/8772/2353/8517/3656/51135/3929/5604/5606/5608/1326/5600/9261/4205/4208/4790/4791/4792/4793/28511/64127/387522/57162/5516/5519/5781/8767/6288/23098/6500/23118/92610/7186/7187/7334/9097/11274
## R-HSA-6783783 6347/6364/6348/6352/1435/1437/1440/2919/3627/2920/3576/3383/3587/3588/3569/3976/5743/7133
## R-HSA-5688426 84142/11047/4287/8678/330/1540/2625/723790/8349/3017/3091/8517/90865/83444/221656/79594/4738/4792/64127/8473/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/51651/5886/387/8767/63891/79589/6478/10254/57559/6881/29844/7046/7128/10318/8658/7186/7187/7353/9097/11274/29761/7415/7416/7417
## R-HSA-381426 174/718/813/1000/10970/1435/5611/2153/54757/2200/11167/10272/2519/2621/3487/3489/3490/3569/3895/3912/3915/4052/4240/11320/375056/4312/54587/5034/5069/255738/5768/7857/51246/6696/8614/10618/54972
## R-HSA-69239 29945/898/246184/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6500/7324
## R-HSA-3000178 176/375790/633/1280/1281/1282/1284/1285/1286/1290/1297/1298/1299/3685/3688/3908/3909/3910/3912/3915/4060/4684/7042/7043/7148
## Count
## R-HSA-351202 38
## R-HSA-1428517 76
## R-HSA-350562 34
## R-HSA-5676590 37
## R-HSA-9020702 56
## R-HSA-5607761 37
## R-HSA-1169091 38
## R-HSA-5362768 34
## R-HSA-163200 57
## R-HSA-69541 34
## R-HSA-1236978 31
## R-HSA-180534 32
## R-HSA-349425 32
## R-HSA-69601 32
## R-HSA-69610 32
## R-HSA-69613 32
## R-HSA-9762114 32
## R-HSA-1234176 37
## R-HSA-1234174 40
## R-HSA-449147 144
## R-HSA-211733 31
## R-HSA-5678895 35
## R-HSA-5387390 34
## R-HSA-180585 32
## R-HSA-8854050 32
## R-HSA-9604323 32
## R-HSA-5610785 34
## R-HSA-69563 36
## R-HSA-69580 36
## R-HSA-75815 31
## R-HSA-174113 32
## R-HSA-4641257 32
## R-HSA-8941858 32
## R-HSA-5668541 47
## R-HSA-169911 31
## R-HSA-450408 32
## R-HSA-1168372 41
## R-HSA-195253 41
## R-HSA-5358346 35
## R-HSA-69615 36
## R-HSA-4641258 32
## R-HSA-187577 33
## R-HSA-5610780 33
## R-HSA-5610783 33
## R-HSA-5607764 46
## R-HSA-2871837 40
## R-HSA-174084 34
## R-HSA-4608870 34
## R-HSA-611105 46
## R-HSA-1236974 42
## R-HSA-446652 60
## R-HSA-5619084 38
## R-HSA-8939902 36
## R-HSA-174154 34
## R-HSA-5658442 34
## R-HSA-450531 40
## R-HSA-69017 35
## R-HSA-69202 38
## R-HSA-983705 46
## R-HSA-1236975 44
## R-HSA-69656 38
## R-HSA-8948751 33
## R-HSA-9759194 36
## R-HSA-174184 34
## R-HSA-1474290 39
## R-HSA-174178 34
## R-HSA-179419 34
## R-HSA-202424 41
## R-HSA-9755511 42
## R-HSA-5632684 37
## R-HSA-9013694 36
## R-HSA-5687128 38
## R-HSA-8878159 40
## R-HSA-176409 34
## R-HSA-176814 34
## R-HSA-9711123 65
## R-HSA-176408 35
## R-HSA-68949 32
## R-HSA-5357801 68
## R-HSA-202403 45
## R-HSA-6799198 27
## R-HSA-109581 60
## R-HSA-4086400 37
## R-HSA-2022090 28
## R-HSA-5689603 39
## R-HSA-8852276 32
## R-HSA-174143 35
## R-HSA-453276 35
## R-HSA-382556 39
## R-HSA-1650814 29
## R-HSA-69052 36
## R-HSA-5684996 83
## R-HSA-3000157 17
## R-HSA-5673001 81
## R-HSA-1268020 27
## R-HSA-168142 36
## R-HSA-168176 36
## R-HSA-975871 36
## R-HSA-5683057 90
## R-HSA-168164 38
## R-HSA-8878166 42
## R-HSA-1474244 84
## R-HSA-166166 39
## R-HSA-937061 39
## R-HSA-5621481 47
## R-HSA-2454202 45
## R-HSA-1257604 76
## R-HSA-5610787 39
## R-HSA-1442490 26
## R-HSA-157118 68
## R-HSA-162909 43
## R-HSA-5663202 111
## R-HSA-8949613 16
## R-HSA-8948216 20
## R-HSA-975138 36
## R-HSA-1474228 45
## R-HSA-975155 36
## R-HSA-168181 36
## R-HSA-450294 25
## R-HSA-163210 11
## R-HSA-6807070 44
## R-HSA-453279 46
## R-HSA-5358351 46
## R-HSA-71387 79
## R-HSA-168138 36
## R-HSA-3858494 45
## R-HSA-70263 16
## R-HSA-8939236 41
## R-HSA-69206 41
## R-HSA-448424 26
## R-HSA-9006925 80
## R-HSA-166058 36
## R-HSA-168188 36
## R-HSA-71406 21
## R-HSA-453274 55
## R-HSA-2214320 9
## R-HSA-1638074 15
## R-HSA-5628897 29
## R-HSA-168179 36
## R-HSA-181438 36
## R-HSA-2243919 10
## R-HSA-8957275 34
## R-HSA-445989 18
## R-HSA-390450 7
## R-HSA-69275 54
## R-HSA-201681 62
## R-HSA-419037 17
## R-HSA-5689880 59
## R-HSA-5619115 49
## R-HSA-186797 21
## R-HSA-917937 21
## R-HSA-1630316 37
## R-HSA-166016 42
## R-HSA-6783783 18
## R-HSA-5688426 75
## R-HSA-381426 37
## R-HSA-69239 36
## R-HSA-3000178 25head(summary(ego))## Warning in summary(ego): summary method to convert the object to data.frame is
## deprecated, please use as.data.frame instead.## ID
## R-HSA-351202 R-HSA-351202
## R-HSA-1428517 R-HSA-1428517
## R-HSA-350562 R-HSA-350562
## R-HSA-5676590 R-HSA-5676590
## R-HSA-9020702 R-HSA-9020702
## R-HSA-5607761 R-HSA-5607761
## Description
## R-HSA-351202 Metabolism of polyamines
## R-HSA-1428517 The citric acid (TCA) cycle and respiratory electron transport
## R-HSA-350562 Regulation of ornithine decarboxylase (ODC)
## R-HSA-5676590 NIK-->noncanonical NF-kB signaling
## R-HSA-9020702 Interleukin-1 signaling
## R-HSA-5607761 Dectin-1 mediated noncanonical NF-kB signaling
## GeneRatio BgRatio pvalue p.adjust qvalue
## R-HSA-351202 38/1933 59/10891 2.252835e-15 3.356725e-12 2.881258e-12
## R-HSA-1428517 76/1933 178/10891 4.892925e-15 3.645229e-12 3.128897e-12
## R-HSA-350562 34/1933 51/10891 1.454711e-14 6.741519e-12 5.786610e-12
## R-HSA-5676590 37/1933 59/10891 1.851969e-14 6.741519e-12 5.786610e-12
## R-HSA-9020702 56/1933 115/10891 2.262255e-14 6.741519e-12 5.786610e-12
## R-HSA-5607761 37/1933 60/10891 4.010768e-14 9.960074e-12 8.549268e-12
## geneID
## R-HSA-351202 262/51582/4946/4947/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/6303/54498/6723
## R-HSA-1428517 50/498/506/509/514/516/518/521/9551/10632/10476/522/80219/84987/51241/1327/9377/1329/1340/1345/1349/1350/54205/1737/81889/2739/2954/3029/3419/3939/3945/4191/4694/51079/4695/4696/4697/4701/4702/4704/4706/51103/91942/29078/4707/54539/4708/4709/4710/4711/4712/4714/4715/4717/4718/4719/4725/4726/4728/4729/5162/8050/5163/5166/54704/9997/6389/6391/9123/8803/8801/10975/7384/7386/27089/7416
## R-HSA-350562 51582/4946/4947/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197
## R-HSA-5676590 1147/9020/4791/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/9040
## R-HSA-9020702 1147/8517/3656/51135/5604/5608/4215/1326/4790/4791/4792/4793/28511/64127/387522/57162/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/8767/6288/6500/23118/92610/7186/7334/9097/11274
## R-HSA-5607761 1147/9020/4791/5682/5683/5684/5685/5686/5687/5688/5689/5699/5690/5691/5692/5693/5694/5695/5696/5698/5704/5705/5707/5716/5717/10213/5708/5709/5710/5713/5715/5720/5721/10197/5971/6500/9040
## Count
## R-HSA-351202 38
## R-HSA-1428517 76
## R-HSA-350562 34
## R-HSA-5676590 37
## R-HSA-9020702 56
## R-HSA-5607761 37#Reactome gene set enrichment test
#ego_reactome<-gsePathway(geneList = gene_list,
#organism = 'human',
#pvalueCutoff = 0.001,
#pAdjustMethod = "BH")
#summary(ego_reactome)dotplot(ego,x="GeneRatio",showCategory=20,font.size=6)
#dotplot(ego_reactome,x="GeneRatio",showCategory=20,font.size=6)subset <- ego[ego$Count>=10, asis=T]
cnetplot(ego,categorySize="geneNum",foldChange=geneList)## Scale for size is already present.
## Adding another scale for size, which will replace the existing scale.## Warning: ggrepel: 2 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
Enrichment plot
filtered_pathway <- subset(fgsea_reactome, NES > 2.3)
filt_p <- as.vector(filtered_pathway$pathway)
for (i in filt_p){
plt <- plotEnrichment(pathway = pathway_reactome[[i]],
gseaParam = 1, ticksSize = 0.5, stats= rank) +
labs(title=i) + theme(plot.title = element_text(hjust = 0.5, face="bold"))
print(plt)
}
reactome_IL= subset(fgsea_reactome, fgsea_reactome$pathway=="REACTOME_INTERLEUKIN_4_AND_INTERLEUKIN_13_SIGNALING")
reactome_IL= unlist(reactome_IL$leadingEdge)
subset <- rld[reactome_IL, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("blue", "forestgreen")
names(col) <- c("Healthy_control", "Healthy_cytokine")
ann_col <- list(Condition = col)
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_INTERLEUKIN_4_AND_INTERLEUKIN_13_SIGNALING",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
reactome_IL= subset(fgsea_reactome, fgsea_reactome$pathway=="REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES")
reactome_IL= unlist(reactome_IL$leadingEdge)
subset <- rld[reactome_IL, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("blue", "forestgreen")
names(col) <- c("Healthy_control", "Healthy_cytokine")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
reactome_IL= subset(fgsea_reactome, fgsea_reactome$pathway=="REACTOME_INTERLEUKIN_10_SIGNALING")
reactome_IL= unlist(reactome_IL$leadingEdge)
subset <- rld[reactome_IL, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("blue", "forestgreen")
names(col) <- c("Healthy_control", "Healthy_cytokine")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_INTERLEUKIN_10_SIGNALING",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_INTERLEUKIN_10_SIGNALING",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
reactome_IL= subset(fgsea_reactome, fgsea_reactome$pathway=="REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS")
reactome_IL= unlist(reactome_IL$leadingEdge)
subset <- rld[reactome_IL, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("blue", "forestgreen")
names(col) <- c("Healthy_control", "Healthy_cytokine")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))
reactome_IL= subset(fgsea_reactome, fgsea_reactome$pathway=="REACTOME_SIGNALING_BY_INTERLEUKINS")
reactome_IL= unlist(reactome_IL$leadingEdge)
subset <- rld[reactome_IL, 7:12]
# scale and center the values
mat <- as.matrix(scale(t(subset), center = T))
# basic plot to check we're plotting something sensible
#pheatmap(t(mat))
# spruce it up a bit..
ann <- data.frame(Condition = c(rep("Healthy_control", 3), rep("Healthy_cytokine", 3)))
rownames(ann) <- rownames(mat)
col <- c("blue", "forestgreen")
names(col) <- c("Healthy_control", "Healthy_cytokine")
ann_col <- list(Condition = col)
pheatmap(t(mat),
show_rownames = TRUE,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_SIGNALING_BY_INTERLEUKINS",
labels_row = rownames(subset), # figure out remove row labels
fontsize_row = 6,
color = hcl.colors(100, "PRGn",rev=F))
ComplexHeatmap::pheatmap(t(mat),
show_rownames = T,
annotation_col = ann,
annotation_colors = ann_col,
main = "REACTOME_SIGNALING_BY_INTERLEUKINS",
labels_row = rownames(subset),
fontsize = 6,
legend = TRUE,
heatmap_legend_param =list(title="z-score",at=c (-1.5,-1,-0.5,0,0.5,1,1.5)),
color=hcl.colors(100, 'PRGn',rev=F))