For protein volume the BOLTGWAS functional variant exhibited higher
genomic prediction accuracy (0.336) compared to the current GS SNP with
a similar number of SNPs (0.325). The remaining fucntional variant
yielded similar genomic prediciton accuracy.
For fat yield and milk volume traits, the BOLTGWAS, asbQTL, and
EEQTL functional variants yielded slightly higher genomic prediction
accuracy compared to the randomly selected SNP from the current GS.
Percent trait
Summary for percent trait
for fat yield percent and protein percent, the majority of functional
SNPs demonstrated a substantial increase in genomic prediction accuracy
compared to the current GS SNP.