datos_indices <-read_excel("C:/Users/JuanSebH2/Downloads/Universidad/Fisiologia/FisioVeg/DocumentoFinal_muestreos.xlsx", 
    sheet = "TRC", col_types = c("text", 
        "text", "numeric", "numeric", "numeric", 
        "numeric"))
datos_indices=data.frame(datos_indices); datos_indices
##    TRATAMIENTOS DIAS.DESPUES.DE.LA.SIEMBRA      TRC      AFE      IAF      TAN
## 1     (-DH-Si )                          0 0.000000   0.0000 0.000000 0.000000
## 2     (+DH-Si )                          0 0.000000   0.0000 0.000000 0.000000
## 3     (+DH+Si1)                          0 0.000000   0.0000 0.000000 0.000000
## 4     (+DH+Si2)                          0 0.000000   0.0000 0.000000 0.000000
## 5     (-DH-Si )                         32 0.208810 153.1991 0.568875 0.001037
## 6     (+DH-Si )                         32 0.190034 148.4174 0.395500 0.000782
## 7     (+DH+Si1)                         32 0.194576 142.9771 0.391500 0.000931
## 8     (+DH+Si2)                         32 0.202723 179.2078 0.464275 0.001154
## 9     (-DH-Si )                         39 0.031721 305.1969 1.216250 0.000248
## 10    (+DH-Si )                         39 0.091648 282.1988 0.917000 0.000650
## 11    (+DH+Si1)                         39 0.109602 252.9008 0.948875 0.000893
## 12    (+DH+Si2)                         39 0.053480 298.2403 0.994650 0.000356
## 13    (-DH-Si )                         46 0.190000 303.7055 1.813095 0.002378
## 14    (+DH-Si )                         46 0.160000 268.2735 1.133344 0.001863
## 15    (+DH+Si1)                         46 0.150000 243.5577 1.287140 0.002252
## 16    (+DH+Si2)                         46 0.180000 242.1115 1.239005 0.002655
datos_indices$TRC=round(datos_indices$TRC,2)
datos_indices$AFE=round(datos_indices$AFE,2)
datos_indices$IAF=round(datos_indices$IAF,2)

datos_indices
##    TRATAMIENTOS DIAS.DESPUES.DE.LA.SIEMBRA  TRC    AFE  IAF      TAN
## 1     (-DH-Si )                          0 0.00   0.00 0.00 0.000000
## 2     (+DH-Si )                          0 0.00   0.00 0.00 0.000000
## 3     (+DH+Si1)                          0 0.00   0.00 0.00 0.000000
## 4     (+DH+Si2)                          0 0.00   0.00 0.00 0.000000
## 5     (-DH-Si )                         32 0.21 153.20 0.57 0.001037
## 6     (+DH-Si )                         32 0.19 148.42 0.40 0.000782
## 7     (+DH+Si1)                         32 0.19 142.98 0.39 0.000931
## 8     (+DH+Si2)                         32 0.20 179.21 0.46 0.001154
## 9     (-DH-Si )                         39 0.03 305.20 1.22 0.000248
## 10    (+DH-Si )                         39 0.09 282.20 0.92 0.000650
## 11    (+DH+Si1)                         39 0.11 252.90 0.95 0.000893
## 12    (+DH+Si2)                         39 0.05 298.24 0.99 0.000356
## 13    (-DH-Si )                         46 0.19 303.71 1.81 0.002378
## 14    (+DH-Si )                         46 0.16 268.27 1.13 0.001863
## 15    (+DH+Si1)                         46 0.15 243.56 1.29 0.002252
## 16    (+DH+Si2)                         46 0.18 242.11 1.24 0.002655
tratamiento_colors <- c("#9E3D22", "#418E4D","#F5C35C", "#2F2F2F")
tratamiento_shapes <- c(16, 17, 18, 19)


ggplot(datos_indices) +
  aes(DIAS.DESPUES.DE.LA.SIEMBRA, TRC, group = TRATAMIENTOS, fill = TRATAMIENTOS, shape = TRATAMIENTOS, color = TRATAMIENTOS) +
  geom_line(size = 1) +
  geom_point(size = 3) +
  scale_fill_manual(values = tratamiento_colors) +
  scale_shape_manual(values = tratamiento_shapes) +
  scale_color_manual(values = tratamiento_colors) +
  labs(title = "TASA RELATIVA DE CRECIMIENTO (f/día)",
       x = "Días después de la siembra", y = "TRC") +
  theme_update()+
  theme(plot.title = element_text(hjust = 0.5, face = "bold", family = "Times New Roman"))
## Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
## ℹ Please use `linewidth` instead.
## This warning is displayed once every 8 hours.
## Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
## generated.
## Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)): font family
## not found in Windows font database
## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

ggplot(datos_indices) +
  aes(DIAS.DESPUES.DE.LA.SIEMBRA, datos_indices$AFE, group = TRATAMIENTOS, fill = TRATAMIENTOS, shape = TRATAMIENTOS, color = TRATAMIENTOS) +
  geom_line(size = 1) +
  geom_point(size = 3) +
  scale_fill_manual(values = tratamiento_colors) +
  scale_shape_manual(values = tratamiento_shapes) +
  scale_color_manual(values = tratamiento_colors) +
  labs(title = "ÁREA FOLIAR ESPECIFICA (cm^2/g)",
       x = "Días después de la siembra", y = "AFE") +
  theme_update()+
  theme(plot.title = element_text(hjust = 0.5, face = "bold", family = "Times New Roman"))
## Warning: Use of `datos_indices$AFE` is discouraged.
## ℹ Use `AFE` instead.
## Warning: Use of `datos_indices$AFE` is discouraged.
## ℹ Use `AFE` instead.
## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

ggplot(datos_indices) +
  aes(DIAS.DESPUES.DE.LA.SIEMBRA, datos_indices$IAF, group = TRATAMIENTOS, fill = TRATAMIENTOS, shape = TRATAMIENTOS, color = TRATAMIENTOS) +
  geom_line(size = 1) +
  geom_point(size = 3) +
  scale_fill_manual(values = tratamiento_colors) +
  scale_shape_manual(values = tratamiento_shapes) +
  scale_color_manual(values = tratamiento_colors) +
  labs(title = "INDICE DE ÁREA FOLIAR (IAF)",
       x = "Días después de la siembra", y = "IAF") +
  theme_update()+
  theme(plot.title = element_text(hjust = 0.5, face = "bold", family = "Times New Roman"))
## Warning: Use of `datos_indices$IAF` is discouraged.
## ℹ Use `IAF` instead.
## Warning: Use of `datos_indices$IAF` is discouraged.
## ℹ Use `IAF` instead.
## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

ggplot(datos_indices) +
  aes(DIAS.DESPUES.DE.LA.SIEMBRA, datos_indices$TAN, group = TRATAMIENTOS, fill = TRATAMIENTOS, shape = TRATAMIENTOS, color = TRATAMIENTOS) +
  geom_line(size = 1) +
  geom_point(size = 3) +
  scale_fill_manual(values = tratamiento_colors) +
  scale_shape_manual(values = tratamiento_shapes) +
  scale_color_manual(values = tratamiento_colors) +
  labs(title = "TASA DE ASIMILACIÓN NETA (g/cm^2*día)",
       x = "Días después de la siembra", y = "TAN") +
  theme_update()+
  theme(plot.title = element_text(hjust = 0.5, face = "bold", family = "Times New Roman"))
## Warning: Use of `datos_indices$TAN` is discouraged.
## ℹ Use `TAN` instead.
## Warning: Use of `datos_indices$TAN` is discouraged.
## ℹ Use `TAN` instead.
## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

## Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font
## family not found in Windows font database

datos_indices_2 <- read_excel("C:/Users/JuanSebH2/Downloads/Universidad/Fisiologia/FisioVeg/DocumentoFinal_muestreos.xlsx", 
    sheet = "indices", col_types = c("text", 
        "text", "numeric", "numeric", "numeric", 
        "numeric"))
datos_indices_2=data.frame(datos_indices_2);datos_indices_2
##    TRATAMIENTOS DIAS.DESPUES.DE.LA.SIEMBRA       TRC      AFE      AIF
## 1     (-DH-Si )                          0  0.000000   0.0000 0.000000
## 2     (-DH-Si )                          0  0.000000   0.0000 0.000000
## 3     (-DH-Si )                          0  0.000000   0.0000 0.000000
## 4     (-DH-Si )                          0  0.000000   0.0000 0.000000
## 5     (+DH-Si )                          0  0.000000   0.0000 0.000000
## 6     (+DH-Si )                          0  0.000000   0.0000 0.000000
## 7     (+DH-Si )                          0  0.000000   0.0000 0.000000
## 8     (+DH-Si )                          0  0.000000   0.0000 0.000000
## 9     (+DH+Si1)                          0  0.000000   0.0000 0.000000
## 10    (+DH+Si1)                          0  0.000000   0.0000 0.000000
## 11    (+DH+Si1)                          0  0.000000   0.0000 0.000000
## 12    (+DH+Si1)                          0  0.000000   0.0000 0.000000
## 13    (+DH+Si2)                          0  0.000000   0.0000 0.000000
## 14    (+DH+Si2)                          0  0.000000   0.0000 0.000000
## 15    (+DH+Si2)                          0  0.000000   0.0000 0.000000
## 16    (+DH+Si2)                          0  0.000000   0.0000 0.000000
## 17    (-DH-Si )                         32  0.207700 161.9697 0.534500
## 18    (-DH-Si )                         32  0.206033 165.0000 0.462000
## 19    (-DH-Si )                         32  0.212226 121.4516 0.753000
## 20    (-DH-Si )                         32  0.209282 164.3750 0.526000
## 21    (+DH-Si )                         32  0.199379 160.3030 0.529000
## 22    (+DH-Si )                         32  0.194207 154.1667 0.370000
## 23    (+DH-Si )                         32  0.191601 129.2000 0.323000
## 24    (+DH-Si )                         32  0.174951 150.0000 0.360000
## 25    (+DH+Si1)                         32  0.200421 123.7500 0.396000
## 26    (+DH+Si1)                         32  0.190914 133.3333 0.400000
## 27    (+DH+Si1)                         32  0.179268 144.2000 0.360500
## 28    (+DH+Si1)                         32  0.207700 170.6250 0.409500
## 29    (+DH+Si2)                         32  0.197748 154.2083 0.370100
## 30    (+DH+Si2)                         32  0.174951 246.5385 0.320500
## 31    (+DH+Si2)                         32  0.220505 150.5128 0.587000
## 32    (+DH+Si2)                         32  0.217688 165.5714 0.579500
## 33    (-DH-Si )                         39  0.078934 313.3237 1.317000
## 34    (-DH-Si )                         39 -0.014617 323.9161 0.916500
## 35    (-DH-Si )                         39  0.006894 269.8212 1.299000
## 36    (-DH-Si )                         39  0.055672 313.7269 1.332500
## 37    (+DH-Si )                         39  0.080979 302.5530 1.098000
## 38    (+DH-Si )                         39  0.094964 262.4320 0.900500
## 39    (+DH-Si )                         39  0.054147 280.9187 0.808500
## 40    (+DH-Si )                         39  0.136502 282.8913 0.861000
## 41    (+DH+Si1)                         39  0.133774 211.1714 0.952000
## 42    (+DH+Si1)                         39  0.108835 246.1261 1.026000
## 43    (+DH+Si1)                         39  0.198042 246.2175 0.942000
## 44    (+DH+Si1)                         39 -0.002244 308.0881 0.875500
## 45    (+DH+Si2)                         39  0.094090 266.8209 0.870100
## 46    (+DH+Si2)                         39  0.158523 361.2962 0.841500
## 47    (+DH+Si2)                         39 -0.032495 264.2209 1.163500
## 48    (+DH+Si2)                         39 -0.006197 300.6230 1.103500
## 49    (-DH-Si )                         46  0.194392 262.0316 1.960110
## 50    (-DH-Si )                         46  0.210391 357.2040 1.487580
## 51    (-DH-Si )                         46  0.187408 307.5118 1.742750
## 52    (-DH-Si )                         46  0.165371 288.0745 2.061940
## 53    (+DH-Si )                         46  0.147529 297.7431 1.131885
## 54    (+DH-Si )                         46  0.150378 241.8142 1.309090
## 55    (+DH-Si )                         46  0.166403 301.9943 1.131685
## 56    (+DH-Si )                         46  0.157216 231.5425 0.960715
## 57    (+DH+Si1)                         46  0.135025 211.9690 1.157565
## 58    (+DH+Si1)                         46  0.170102 238.5266 1.440755
## 59    (+DH+Si1)                         46  0.112217 222.3248 1.243190
## 60    (+DH+Si1)                         46  0.187281 301.4105 1.307050
## 61    (+DH+Si2)                         46  0.196165 212.7903 1.345500
## 62    (+DH+Si2)                         46  0.151069 261.2818 1.343000
## 63    (+DH+Si2)                         46  0.191113 249.0238 1.215190
## 64    (+DH+Si2)                         46  0.172530 245.3501 1.052330
##          TAN
## 1   0.000000
## 2   0.000000
## 3   0.000000
## 4   0.000000
## 5   0.000000
## 6   0.000000
## 7   0.000000
## 8   0.000000
## 9   0.000000
## 10  0.000000
## 11  0.000000
## 12  0.000000
## 13  0.000000
## 14  0.000000
## 15  0.000000
## 16  0.000000
## 17  0.001052
## 18  0.001117
## 19  0.000926
## 20  0.001120
## 21  0.000812
## 22  0.000909
## 23  0.000928
## 24  0.000501
## 25  0.001052
## 26  0.000770
## 27  0.000575
## 28  0.001294
## 29  0.001018
## 30  0.000548
## 31  0.001471
## 32  0.001358
## 33  0.000624
## 34 -0.000111
## 35  0.000049
## 36  0.000420
## 37  0.000586
## 38  0.000757
## 39  0.000380
## 40  0.000723
## 41  0.001433
## 42  0.000728
## 43  0.001437
## 44 -0.000020
## 45  0.000863
## 46  0.000950
## 47 -0.000290
## 48 -0.000058
## 49  0.002866
## 50  0.002245
## 51  0.002183
## 52  0.001838
## 53  0.002374
## 54  0.002003
## 55  0.001884
## 56  0.002095
## 57  0.003023
## 58  0.002201
## 59  0.001703
## 60  0.002310
## 61  0.003464
## 62  0.001665
## 63  0.003056
## 64  0.003232
names(datos_indices_2)
## [1] "TRATAMIENTOS"               "DIAS.DESPUES.DE.LA.SIEMBRA"
## [3] "TRC"                        "AFE"                       
## [5] "AIF"                        "TAN"
m1=datos_indices_2[c(17:32),];m1
##    TRATAMIENTOS DIAS.DESPUES.DE.LA.SIEMBRA      TRC      AFE    AIF      TAN
## 17    (-DH-Si )                         32 0.207700 161.9697 0.5345 0.001052
## 18    (-DH-Si )                         32 0.206033 165.0000 0.4620 0.001117
## 19    (-DH-Si )                         32 0.212226 121.4516 0.7530 0.000926
## 20    (-DH-Si )                         32 0.209282 164.3750 0.5260 0.001120
## 21    (+DH-Si )                         32 0.199379 160.3030 0.5290 0.000812
## 22    (+DH-Si )                         32 0.194207 154.1667 0.3700 0.000909
## 23    (+DH-Si )                         32 0.191601 129.2000 0.3230 0.000928
## 24    (+DH-Si )                         32 0.174951 150.0000 0.3600 0.000501
## 25    (+DH+Si1)                         32 0.200421 123.7500 0.3960 0.001052
## 26    (+DH+Si1)                         32 0.190914 133.3333 0.4000 0.000770
## 27    (+DH+Si1)                         32 0.179268 144.2000 0.3605 0.000575
## 28    (+DH+Si1)                         32 0.207700 170.6250 0.4095 0.001294
## 29    (+DH+Si2)                         32 0.197748 154.2083 0.3701 0.001018
## 30    (+DH+Si2)                         32 0.174951 246.5385 0.3205 0.000548
## 31    (+DH+Si2)                         32 0.220505 150.5128 0.5870 0.001471
## 32    (+DH+Si2)                         32 0.217688 165.5714 0.5795 0.001358
m2=datos_indices_2[c(33:48),];m2
##    TRATAMIENTOS DIAS.DESPUES.DE.LA.SIEMBRA       TRC      AFE    AIF       TAN
## 33    (-DH-Si )                         39  0.078934 313.3237 1.3170  0.000624
## 34    (-DH-Si )                         39 -0.014617 323.9161 0.9165 -0.000111
## 35    (-DH-Si )                         39  0.006894 269.8212 1.2990  0.000049
## 36    (-DH-Si )                         39  0.055672 313.7269 1.3325  0.000420
## 37    (+DH-Si )                         39  0.080979 302.5530 1.0980  0.000586
## 38    (+DH-Si )                         39  0.094964 262.4320 0.9005  0.000757
## 39    (+DH-Si )                         39  0.054147 280.9187 0.8085  0.000380
## 40    (+DH-Si )                         39  0.136502 282.8913 0.8610  0.000723
## 41    (+DH+Si1)                         39  0.133774 211.1714 0.9520  0.001433
## 42    (+DH+Si1)                         39  0.108835 246.1261 1.0260  0.000728
## 43    (+DH+Si1)                         39  0.198042 246.2175 0.9420  0.001437
## 44    (+DH+Si1)                         39 -0.002244 308.0881 0.8755 -0.000020
## 45    (+DH+Si2)                         39  0.094090 266.8209 0.8701  0.000863
## 46    (+DH+Si2)                         39  0.158523 361.2962 0.8415  0.000950
## 47    (+DH+Si2)                         39 -0.032495 264.2209 1.1635 -0.000290
## 48    (+DH+Si2)                         39 -0.006197 300.6230 1.1035 -0.000058
m3=datos_indices_2[c(49:64),];m3
##    TRATAMIENTOS DIAS.DESPUES.DE.LA.SIEMBRA      TRC      AFE      AIF      TAN
## 49    (-DH-Si )                         46 0.194392 262.0316 1.960110 0.002866
## 50    (-DH-Si )                         46 0.210391 357.2040 1.487580 0.002245
## 51    (-DH-Si )                         46 0.187408 307.5118 1.742750 0.002183
## 52    (-DH-Si )                         46 0.165371 288.0745 2.061940 0.001838
## 53    (+DH-Si )                         46 0.147529 297.7431 1.131885 0.002374
## 54    (+DH-Si )                         46 0.150378 241.8142 1.309090 0.002003
## 55    (+DH-Si )                         46 0.166403 301.9943 1.131685 0.001884
## 56    (+DH-Si )                         46 0.157216 231.5425 0.960715 0.002095
## 57    (+DH+Si1)                         46 0.135025 211.9690 1.157565 0.003023
## 58    (+DH+Si1)                         46 0.170102 238.5266 1.440755 0.002201
## 59    (+DH+Si1)                         46 0.112217 222.3248 1.243190 0.001703
## 60    (+DH+Si1)                         46 0.187281 301.4105 1.307050 0.002310
## 61    (+DH+Si2)                         46 0.196165 212.7903 1.345500 0.003464
## 62    (+DH+Si2)                         46 0.151069 261.2818 1.343000 0.001665
## 63    (+DH+Si2)                         46 0.191113 249.0238 1.215190 0.003056
## 64    (+DH+Si2)                         46 0.172530 245.3501 1.052330 0.003232
TRC_m1=aov(TRC~TRATAMIENTOS,data=m1)
summary(TRC_m1)
##              Df    Sum Sq   Mean Sq F value Pr(>F)
## TRATAMIENTOS  3 0.0008402 0.0002801   1.566  0.249
## Residuals    12 0.0021459 0.0001788
TukeyHSD(TRC_m1)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = TRC ~ TRATAMIENTOS, data = m1)
## 
## $TRATAMIENTOS
##                            diff         lwr        upr     p adj
## (+DH-Si )-(-DH-Si ) -0.01877575 -0.04684891 0.00929741 0.2462547
## (+DH+Si1)-(-DH-Si ) -0.01423450 -0.04230766 0.01383866 0.4642548
## (+DH+Si2)-(-DH-Si ) -0.00608725 -0.03416041 0.02198591 0.9157032
## (+DH+Si1)-(+DH-Si )  0.00454125 -0.02353191 0.03261441 0.9620292
## (+DH+Si2)-(+DH-Si )  0.01268850 -0.01538466 0.04076166 0.5558259
## (+DH+Si2)-(+DH+Si1)  0.00814725 -0.01992591 0.03622041 0.8241635
TukeyC::TukeyC(TRC_m1)
## Results
##           Means G1
## (-DH-Si )  0.21  a
## (+DH+Si2)  0.20  a
## (+DH+Si1)  0.19  a
## (+DH-Si )  0.19  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH+Si2) (+DH+Si1) (+DH-Si )
## (-DH-Si )     0.000     0.006     0.014     0.019
## (+DH+Si2)     0.916     0.000     0.008     0.013
## (+DH+Si1)     0.464     0.824     0.000     0.005
## (+DH-Si )     0.246     0.556     0.962     0.000
## 
## MSD
##           (-DH-Si ) (+DH+Si2) (+DH+Si1) (+DH-Si )
## (-DH-Si )     0.000     0.028     0.028     0.028
## (+DH+Si2)     0.028     0.000     0.028     0.028
## (+DH+Si1)     0.028     0.028     0.000     0.028
## (+DH-Si )     0.028     0.028     0.028     0.000
TRC_m2=aov(TRC~TRATAMIENTOS,data=m2)
summary(TRC_m2)
##              Df  Sum Sq  Mean Sq F value Pr(>F)
## TRATAMIENTOS  3 0.01506 0.005020   1.123  0.379
## Residuals    12 0.05366 0.004472
TukeyHSD(TRC_m2)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = TRC ~ TRATAMIENTOS, data = m2)
## 
## $TRATAMIENTOS
##                            diff         lwr        upr     p adj
## (+DH-Si )-(-DH-Si )  0.05992725 -0.08045817 0.20031267 0.5990387
## (+DH+Si1)-(-DH-Si )  0.07788100 -0.06250442 0.21826642 0.3908802
## (+DH+Si2)-(-DH-Si )  0.02175950 -0.11862592 0.16214492 0.9663117
## (+DH+Si1)-(+DH-Si )  0.01795375 -0.12243167 0.15833917 0.9804864
## (+DH+Si2)-(+DH-Si ) -0.03816775 -0.17855317 0.10221767 0.8498601
## (+DH+Si2)-(+DH+Si1) -0.05612150 -0.19650692 0.08426392 0.6459936
TukeyC::TukeyC(TRC_m2)
## Results
##           Means G1
## (+DH+Si1)  0.11  a
## (+DH-Si )  0.09  a
## (+DH+Si2)  0.05  a
## (-DH-Si )  0.03  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (+DH+Si1) (+DH-Si ) (+DH+Si2) (-DH-Si )
## (+DH+Si1)     0.000     0.018     0.056     0.078
## (+DH-Si )     0.980     0.000     0.038     0.060
## (+DH+Si2)     0.646     0.850     0.000     0.022
## (-DH-Si )     0.391     0.599     0.966     0.000
## 
## MSD
##           (+DH+Si1) (+DH-Si ) (+DH+Si2) (-DH-Si )
## (+DH+Si1)      0.00      0.14      0.14      0.14
## (+DH-Si )      0.14      0.00      0.14      0.14
## (+DH+Si2)      0.14      0.14      0.00      0.14
## (-DH-Si )      0.14      0.14      0.14      0.00
TRC_m3=aov(TRC~TRATAMIENTOS,data=m3)
summary(TRC_m3)
##              Df   Sum Sq   Mean Sq F value Pr(>F)  
## TRATAMIENTOS  3 0.003977 0.0013257   2.671 0.0948 .
## Residuals    12 0.005956 0.0004963                 
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
TukeyHSD(TRC_m3)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = TRC ~ TRATAMIENTOS, data = m3)
## 
## $TRATAMIENTOS
##                            diff         lwr         upr     p adj
## (+DH-Si )-(-DH-Si ) -0.03400900 -0.08077768 0.012759683 0.1900561
## (+DH+Si1)-(-DH-Si ) -0.03823425 -0.08500293 0.008534433 0.1244047
## (+DH+Si2)-(-DH-Si ) -0.01167125 -0.05843993 0.035097433 0.8787429
## (+DH+Si1)-(+DH-Si ) -0.00422525 -0.05099393 0.042543433 0.9928886
## (+DH+Si2)-(+DH-Si )  0.02233775 -0.02443093 0.069106433 0.5124691
## (+DH+Si2)-(+DH+Si1)  0.02656300 -0.02020568 0.073331683 0.3718170
TukeyC::TukeyC(TRC_m3)
## Results
##           Means G1
## (-DH-Si )  0.19  a
## (+DH+Si2)  0.18  a
## (+DH-Si )  0.16  a
## (+DH+Si1)  0.15  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH+Si2) (+DH-Si ) (+DH+Si1)
## (-DH-Si )     0.000     0.012     0.034     0.038
## (+DH+Si2)     0.879     0.000     0.022     0.027
## (+DH-Si )     0.190     0.512     0.000     0.004
## (+DH+Si1)     0.124     0.372     0.993     0.000
## 
## MSD
##           (-DH-Si ) (+DH+Si2) (+DH-Si ) (+DH+Si1)
## (-DH-Si )     0.000     0.047     0.047     0.047
## (+DH+Si2)     0.047     0.000     0.047     0.047
## (+DH-Si )     0.047     0.047     0.000     0.047
## (+DH+Si1)     0.047     0.047     0.047     0.000
AFE_m1=aov(AFE~TRATAMIENTOS,data=m1)
summary(AFE_m1)
##              Df Sum Sq Mean Sq F value Pr(>F)
## TRATAMIENTOS  3   3094  1031.4   1.332   0.31
## Residuals    12   9291   774.3
TukeyHSD(AFE_m1)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = AFE ~ TRATAMIENTOS, data = m1)
## 
## $TRATAMIENTOS
##                           diff       lwr      upr     p adj
## (+DH-Si )-(-DH-Si )  -4.781652 -63.19767 53.63436 0.9946790
## (+DH+Si1)-(-DH-Si ) -10.221995 -68.63801 48.19402 0.9527762
## (+DH+Si2)-(-DH-Si )  26.008683 -32.40733 84.42470 0.5673862
## (+DH+Si1)-(+DH-Si )  -5.440343 -63.85636 52.97567 0.9922261
## (+DH+Si2)-(+DH-Si )  30.790335 -27.62568 89.20635 0.4326410
## (+DH+Si2)-(+DH+Si1)  36.230678 -22.18534 94.64669 0.3022206
TukeyC::TukeyC(AFE_m1)
## Results
##            Means G1
## (+DH+Si2) 179.21  a
## (-DH-Si ) 153.20  a
## (+DH-Si ) 148.42  a
## (+DH+Si1) 142.98  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (+DH+Si2) (-DH-Si ) (+DH-Si ) (+DH+Si1)
## (+DH+Si2)     0.000    26.009    30.790    36.231
## (-DH-Si )     0.567     0.000     4.782    10.222
## (+DH-Si )     0.433     0.995     0.000     5.440
## (+DH+Si1)     0.302     0.953     0.992     0.000
## 
## MSD
##           (+DH+Si2) (-DH-Si ) (+DH-Si ) (+DH+Si1)
## (+DH+Si2)     0.000    58.416    58.416    58.416
## (-DH-Si )    58.416     0.000    58.416    58.416
## (+DH-Si )    58.416    58.416     0.000    58.416
## (+DH+Si1)    58.416    58.416    58.416     0.000
AFE_m2=aov(AFE~TRATAMIENTOS,data=m2)
summary(AFE_m2)
##              Df Sum Sq Mean Sq F value Pr(>F)
## TRATAMIENTOS  3   6484    2161   1.914  0.181
## Residuals    12  13552    1129
TukeyHSD(AFE_m2)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = AFE ~ TRATAMIENTOS, data = m2)
## 
## $TRATAMIENTOS
##                           diff        lwr       upr     p adj
## (+DH-Si )-(-DH-Si ) -22.998193  -93.54619  47.54981 0.7697199
## (+DH+Si1)-(-DH-Si ) -52.296148 -122.84415  18.25185 0.1781814
## (+DH+Si2)-(-DH-Si )  -6.956693  -77.50469  63.59131 0.9908113
## (+DH+Si1)-(+DH-Si ) -29.297955  -99.84595  41.25004 0.6191052
## (+DH+Si2)-(+DH-Si )  16.041500  -54.50650  86.58950 0.9045222
## (+DH+Si2)-(+DH+Si1)  45.339455  -25.20854 115.88745 0.2753006
TukeyC::TukeyC(AFE_m2)
## Results
##            Means G1
## (-DH-Si ) 305.20  a
## (+DH+Si2) 298.24  a
## (+DH-Si ) 282.20  a
## (+DH+Si1) 252.90  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH+Si2) (+DH-Si ) (+DH+Si1)
## (-DH-Si )     0.000     6.957    22.998    52.296
## (+DH+Si2)     0.991     0.000    16.041    45.339
## (+DH-Si )     0.770     0.905     0.000    29.298
## (+DH+Si1)     0.178     0.275     0.619     0.000
## 
## MSD
##           (-DH-Si ) (+DH+Si2) (+DH-Si ) (+DH+Si1)
## (-DH-Si )     0.000    70.548    70.548    70.548
## (+DH+Si2)    70.548     0.000    70.548    70.548
## (+DH-Si )    70.548    70.548     0.000    70.548
## (+DH+Si1)    70.548    70.548    70.548     0.000
AFE_m3=aov(AFE~TRATAMIENTOS,data=m3)
summary(AFE_m3)
##              Df Sum Sq Mean Sq F value Pr(>F)  
## TRATAMIENTOS  3   9964    3321   2.654 0.0961 .
## Residuals    12  15019    1252                 
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
TukeyHSD(AFE_m3)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = AFE ~ TRATAMIENTOS, data = m3)
## 
## $TRATAMIENTOS
##                           diff        lwr      upr     p adj
## (+DH-Si )-(-DH-Si ) -35.431950 -109.70114 38.83724 0.5133830
## (+DH+Si1)-(-DH-Si ) -60.147757 -134.41695 14.12143 0.1290704
## (+DH+Si2)-(-DH-Si ) -61.593995 -135.86319 12.67520 0.1174995
## (+DH+Si1)-(+DH-Si ) -24.715808  -98.98500 49.55338 0.7588473
## (+DH+Si2)-(+DH-Si ) -26.162045 -100.43124 48.10715 0.7269378
## (+DH+Si2)-(+DH+Si1)  -1.446237  -75.71543 72.82295 0.9999265
TukeyC::TukeyC(AFE_m3)
## Results
##            Means G1
## (-DH-Si ) 303.71  a
## (+DH-Si ) 268.27  a
## (+DH+Si1) 243.56  a
## (+DH+Si2) 242.11  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH-Si ) (+DH+Si1) (+DH+Si2)
## (-DH-Si )     0.000    35.432    60.148    61.594
## (+DH-Si )     0.513     0.000    24.716    26.162
## (+DH+Si1)     0.129     0.759     0.000     1.446
## (+DH+Si2)     0.117     0.727     1.000     0.000
## 
## MSD
##           (-DH-Si ) (+DH-Si ) (+DH+Si1) (+DH+Si2)
## (-DH-Si )     0.000    74.269    74.269    74.269
## (+DH-Si )    74.269     0.000    74.269    74.269
## (+DH+Si1)    74.269    74.269     0.000    74.269
## (+DH+Si2)    74.269    74.269    74.269     0.000
AIF_m1=aov(AIF~TRATAMIENTOS,data=m1)
summary(AIF_m1)
##              Df Sum Sq Mean Sq F value Pr(>F)
## TRATAMIENTOS  3 0.0825 0.02750   2.489   0.11
## Residuals    12 0.1326 0.01105
TukeyHSD(AIF_m1)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = AIF ~ TRATAMIENTOS, data = m1)
## 
## $TRATAMIENTOS
##                          diff        lwr        upr     p adj
## (+DH-Si )-(-DH-Si ) -0.173375 -0.3940454 0.04729537 0.1448428
## (+DH+Si1)-(-DH-Si ) -0.177375 -0.3980454 0.04329537 0.1328732
## (+DH+Si2)-(-DH-Si ) -0.104600 -0.3252704 0.11607037 0.5185108
## (+DH+Si1)-(+DH-Si ) -0.004000 -0.2246704 0.21667037 0.9999407
## (+DH+Si2)-(+DH-Si )  0.068775 -0.1518954 0.28944537 0.7921348
## (+DH+Si2)-(+DH+Si1)  0.072775 -0.1478954 0.29344537 0.7636610
TukeyC::TukeyC(AIF_m1)
## Results
##           Means G1
## (-DH-Si )  0.57  a
## (+DH+Si2)  0.46  a
## (+DH-Si )  0.40  a
## (+DH+Si1)  0.39  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH+Si2) (+DH-Si ) (+DH+Si1)
## (-DH-Si )     0.000     0.105     0.173     0.177
## (+DH+Si2)     0.519     0.000     0.069     0.073
## (+DH-Si )     0.145     0.792     0.000     0.004
## (+DH+Si1)     0.133     0.764     1.000     0.000
## 
## MSD
##           (-DH-Si ) (+DH+Si2) (+DH-Si ) (+DH+Si1)
## (-DH-Si )     0.000     0.221     0.221     0.221
## (+DH+Si2)     0.221     0.000     0.221     0.221
## (+DH-Si )     0.221     0.221     0.000     0.221
## (+DH+Si1)     0.221     0.221     0.221     0.000
AIF_m2=aov(AIF~TRATAMIENTOS,data=m2)
summary(AIF_m2)
##              Df Sum Sq Mean Sq F value Pr(>F)  
## TRATAMIENTOS  3 0.2193 0.07310   3.386  0.054 .
## Residuals    12 0.2590 0.02158                 
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
TukeyHSD(AIF_m2)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = AIF ~ TRATAMIENTOS, data = m2)
## 
## $TRATAMIENTOS
##                          diff        lwr         upr     p adj
## (+DH-Si )-(-DH-Si ) -0.299250 -0.6076796 0.009179634 0.0582129
## (+DH+Si1)-(-DH-Si ) -0.267375 -0.5758046 0.041054634 0.0977874
## (+DH+Si2)-(-DH-Si ) -0.221600 -0.5300296 0.086829634 0.1976974
## (+DH+Si1)-(+DH-Si )  0.031875 -0.2765546 0.340304634 0.9894636
## (+DH+Si2)-(+DH-Si )  0.077650 -0.2307796 0.386079634 0.8760142
## (+DH+Si2)-(+DH+Si1)  0.045775 -0.2626546 0.354204634 0.9701891
TukeyC::TukeyC(AIF_m2)
## Results
##           Means G1
## (-DH-Si )  1.22  a
## (+DH+Si2)  0.99  a
## (+DH+Si1)  0.95  a
## (+DH-Si )  0.92  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH+Si2) (+DH+Si1) (+DH-Si )
## (-DH-Si )     0.000     0.222     0.267     0.299
## (+DH+Si2)     0.198     0.000     0.046     0.078
## (+DH+Si1)     0.098     0.970     0.000     0.032
## (+DH-Si )     0.058     0.876     0.989     0.000
## 
## MSD
##           (-DH-Si ) (+DH+Si2) (+DH+Si1) (+DH-Si )
## (-DH-Si )     0.000     0.308     0.308     0.308
## (+DH+Si2)     0.308     0.000     0.308     0.308
## (+DH+Si1)     0.308     0.308     0.000     0.308
## (+DH-Si )     0.308     0.308     0.308     0.000
AIF_m3=aov(AIF~TRATAMIENTOS,data=m3)
summary(AIF_m3)
##              Df Sum Sq Mean Sq F value   Pr(>F)    
## TRATAMIENTOS  3 1.1054  0.3685   12.44 0.000541 ***
## Residuals    12 0.3554  0.0296                     
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
TukeyHSD(AIF_m3)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = AIF ~ TRATAMIENTOS, data = m3)
## 
## $TRATAMIENTOS
##                           diff        lwr        upr     p adj
## (+DH-Si )-(-DH-Si ) -0.6797512 -1.0410476 -0.3184549 0.0005937
## (+DH+Si1)-(-DH-Si ) -0.5259550 -0.8872513 -0.1646587 0.0047408
## (+DH+Si2)-(-DH-Si ) -0.5740900 -0.9353863 -0.2127937 0.0024267
## (+DH+Si1)-(+DH-Si )  0.1537962 -0.2075001  0.5150926 0.6011112
## (+DH+Si2)-(+DH-Si )  0.1056612 -0.2556351  0.4669576 0.8209195
## (+DH+Si2)-(+DH+Si1) -0.0481350 -0.4094313  0.3131613 0.9780622
TukeyC::TukeyC(AIF_m3)
## Results
##           Means G1 G2
## (-DH-Si )  1.81  a   
## (+DH+Si1)  1.29     b
## (+DH+Si2)  1.24     b
## (+DH-Si )  1.13     b
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (-DH-Si ) (+DH+Si1) (+DH+Si2) (+DH-Si )
## (-DH-Si )     0.000     0.526     0.574     0.680
## (+DH+Si1)     0.005     0.000     0.048     0.154
## (+DH+Si2)     0.002     0.978     0.000     0.106
## (+DH-Si )     0.001     0.601     0.821     0.000
## 
## MSD
##           (-DH-Si ) (+DH+Si1) (+DH+Si2) (+DH-Si )
## (-DH-Si )     0.000     0.361     0.361     0.361
## (+DH+Si1)     0.361     0.000     0.361     0.361
## (+DH+Si2)     0.361     0.361     0.000     0.361
## (+DH-Si )     0.361     0.361     0.361     0.000
TAN_m1=aov(TAN~TRATAMIENTOS,data=m1)
summary(TAN_m1)
##              Df    Sum Sq   Mean Sq F value Pr(>F)
## TRATAMIENTOS  3 2.362e-07 7.874e-08   0.988  0.431
## Residuals    12 9.563e-07 7.969e-08
TukeyHSD(TAN_m1)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = TAN ~ TRATAMIENTOS, data = m1)
## 
## $TRATAMIENTOS
##                            diff           lwr          upr     p adj
## (+DH-Si )-(-DH-Si ) -0.00026625 -0.0008588908 0.0003263908 0.5604788
## (+DH+Si1)-(-DH-Si ) -0.00013100 -0.0007236408 0.0004616408 0.9113281
## (+DH+Si2)-(-DH-Si )  0.00004500 -0.0005476408 0.0006376408 0.9957364
## (+DH+Si1)-(+DH-Si )  0.00013525 -0.0004573908 0.0007278908 0.9036104
## (+DH+Si2)-(+DH-Si )  0.00031125 -0.0002813908 0.0009038908 0.4355846
## (+DH+Si2)-(+DH+Si1)  0.00017600 -0.0004166408 0.0007686408 0.8142826
TukeyC::TukeyC(TAN_m1)
## Results
##           Means G1
## (+DH+Si2)  0.00  a
## (-DH-Si )  0.00  a
## (+DH+Si1)  0.00  a
## (+DH-Si )  0.00  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (+DH+Si2) (-DH-Si ) (+DH+Si1) (+DH-Si )
## (+DH+Si2)     0.000     0.000     0.000         0
## (-DH-Si )     0.996     0.000     0.000         0
## (+DH+Si1)     0.814     0.911     0.000         0
## (+DH-Si )     0.436     0.560     0.904         0
## 
## MSD
##           (+DH+Si2) (-DH-Si ) (+DH+Si1) (+DH-Si )
## (+DH+Si2)     0.000     0.001     0.001     0.001
## (-DH-Si )     0.001     0.000     0.001     0.001
## (+DH+Si1)     0.001     0.001     0.000     0.001
## (+DH-Si )     0.001     0.001     0.001     0.000
TAN_m2=aov(TAN~TRATAMIENTOS,data=m2)
summary(TAN_m2)
##              Df    Sum Sq   Mean Sq F value Pr(>F)
## TRATAMIENTOS  3 9.890e-07 3.297e-07   1.287  0.323
## Residuals    12 3.074e-06 2.561e-07
TukeyHSD(TAN_m2)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = TAN ~ TRATAMIENTOS, data = m2)
## 
## $TRATAMIENTOS
##                            diff           lwr          upr     p adj
## (+DH-Si )-(-DH-Si )  0.00036600 -0.0006964905 0.0014284905 0.7398178
## (+DH+Si1)-(-DH-Si )  0.00064900 -0.0004134905 0.0017114905 0.3140148
## (+DH+Si2)-(-DH-Si )  0.00012075 -0.0009417405 0.0011832405 0.9861146
## (+DH+Si1)-(+DH-Si )  0.00028300 -0.0007794905 0.0013454905 0.8572622
## (+DH+Si2)-(+DH-Si ) -0.00024525 -0.0013077405 0.0008172405 0.9007202
## (+DH+Si2)-(+DH+Si1) -0.00052825 -0.0015907405 0.0005342405 0.4802068
TukeyC::TukeyC(TAN_m2)
## Results
##           Means G1
## (+DH+Si1)  0.00  a
## (+DH-Si )  0.00  a
## (+DH+Si2)  0.00  a
## (-DH-Si )  0.00  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (+DH+Si1) (+DH-Si ) (+DH+Si2) (-DH-Si )
## (+DH+Si1)     0.000     0.000     0.001     0.001
## (+DH-Si )     0.857     0.000     0.000     0.000
## (+DH+Si2)     0.480     0.901     0.000     0.000
## (-DH-Si )     0.314     0.740     0.986     0.000
## 
## MSD
##           (+DH+Si1) (+DH-Si ) (+DH+Si2) (-DH-Si )
## (+DH+Si1)     0.000     0.001     0.001     0.001
## (+DH-Si )     0.001     0.000     0.001     0.001
## (+DH+Si2)     0.001     0.001     0.000     0.001
## (-DH-Si )     0.001     0.001     0.001     0.000
TAN_m3=aov(TAN~TRATAMIENTOS,data=m3)
summary(TAN_m3)
##              Df    Sum Sq   Mean Sq F value Pr(>F)
## TRATAMIENTOS  3 1.296e-06 4.319e-07   1.465  0.273
## Residuals    12 3.538e-06 2.949e-07
TukeyHSD(TAN_m3)
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = TAN ~ TRATAMIENTOS, data = m3)
## 
## $TRATAMIENTOS
##                            diff           lwr          upr     p adj
## (+DH-Si )-(-DH-Si ) -0.00019400 -0.0013339455 0.0009459455 0.9562736
## (+DH+Si1)-(-DH-Si )  0.00002625 -0.0011136955 0.0011661955 0.9998785
## (+DH+Si2)-(-DH-Si )  0.00057125 -0.0005686955 0.0017111955 0.4738110
## (+DH+Si1)-(+DH-Si )  0.00022025 -0.0009196955 0.0013601955 0.9380823
## (+DH+Si2)-(+DH-Si )  0.00076525 -0.0003746955 0.0019051955 0.2436164
## (+DH+Si2)-(+DH+Si1)  0.00054500 -0.0005949455 0.0016849455 0.5116829
TukeyC::TukeyC(TAN_m3)
## Results
##           Means G1
## (+DH+Si2)  0.00  a
## (+DH+Si1)  0.00  a
## (-DH-Si )  0.00  a
## (+DH-Si )  0.00  a
## 
## Sig.level
##  0.05
## 
## Diff_Prob
##           (+DH+Si2) (+DH+Si1) (-DH-Si ) (+DH-Si )
## (+DH+Si2)     0.000     0.001     0.001     0.001
## (+DH+Si1)     0.512     0.000     0.000     0.000
## (-DH-Si )     0.474     1.000     0.000     0.000
## (+DH-Si )     0.244     0.938     0.956     0.000
## 
## MSD
##           (+DH+Si2) (+DH+Si1) (-DH-Si ) (+DH-Si )
## (+DH+Si2)     0.000     0.001     0.001     0.001
## (+DH+Si1)     0.001     0.000     0.001     0.001
## (-DH-Si )     0.001     0.001     0.000     0.001
## (+DH-Si )     0.001     0.001     0.001     0.000