## [[1]]
##
## [[2]]
##
## [[3]]
##
## [[4]]
##
## [[5]]
##
## [[6]]
##
## [[7]]
##
## [[8]]
##
## [[9]]
##
## [[10]]
##
## [[11]]
##
## [[12]]
UMAP re-clustering, to do an unsupervised visualization of the clustering of the doublets. #selecting gene names for features
## [[1]]
##
## [[2]]
##
## [[3]]
##
## [[4]]
##
## [[5]]
##
## [[6]]
##
## [[7]]
##
## [[8]]
##
## [[9]]
##
## [[10]]
##
## [[11]]
##
## [[12]]
## $`11`
## scDblFinder.class
## sample singlet doublet
## CB113T02X__batch11 282 10
## CB115T01X__batch11 425 20
## CB132T01X__batch11 188 13
## CB132T04X__batch11 465 27
## CB138T01X__batch11 220 11
## CB138T04X__batch11 558 31
## CB140T04X__batch11 411 20
## CB238T01X__batch11 413 18
## CB238T03X__batch11 392 16
## CB272T01X__batch11 240 4
## CB324T01X__batch11 440 13
## CB352T01X__batch11 292 11
## DR079T01X__batch11 543 16
## NA__batch11 649 59
## P001T01X__batch11 457 15
## S009T01X__batch11 490 19
## S009T02X__batch11 474 18
## S009T03X__batch11 690 32
##
## $`13`
## scDblFinder.class
## sample singlet doublet
## CB117T01X__batch13 726 34
## CB117T04X__batch13 636 20
## CB120T01X__batch13 375 27
## CB120T04X__batch13 467 19
## CB131T01X__batch13 250 11
## CB131T04X__batch13 143 8
## CB232T01X__batch13 898 49
## CB269T01X__batch13 97 4
## CB350T02X__batch13 21 3
## DR037T01X__batch13 208 9
## DR037T07X__batch13 91 5
## NA__batch13 964 208
## P001T01X__batch13 338 8
## S015T01X__batch13 669 20
## S015T02X__batch13 424 16
## V005T01X__batch13 475 16
## V006T01X__batch13 485 12
## V007T01X__batch13 429 28
##
## $`10`
## scDblFinder.class
## sample singlet doublet
## CB118T01X__batch10 569 25
## CB128T04X__batch10 681 43
## CB162T01X__batch10 602 20
## CB162T04X__batch10 578 17
## CB169T01X__batch10 606 25
## CB169T04X__batch10 139 6
## CB219T01X__batch10 603 27
## CB229T04X__batch10 402 20
## CB235T01X__batch10 670 37
## CB235T04X__batch10 685 23
## CB236T01X__batch10 222 6
## CB298T01X__batch10 440 20
## CB322T01X__batch10 397 16
## NA__batch10 867 162
## P001T01X__batch10 208 13
## S018T01X__batch10 415 17
## S018T02X__batch10 393 10
## V011T01X__batch10 423 11
##
## $`14`
## scDblFinder.class
## sample singlet doublet
## CB119T01X__batch14 403 8
## CB119T04X__batch14 346 17
## CB150T01X__batch14 465 14
## CB150T04X__batch14 492 29
## CB156T01X__batch14 552 18
## CB268T01X__batch14 46 2
## CB346T01X__batch14 611 24
## DR007T01X__batch14 414 17
## DR019T01X__batch14 263 12
## DR075T01X__batch14 398 10
## NA__batch14 1514 249
## P001T01X__batch14 121 4
## S020T02X__batch14 401 11
## S020T03X__batch14 192 10
## S035T01X__batch14 659 24
## V008T01X__batch14 236 8
## V009T01X__batch14 206 7
## V017T01X__batch14 34 1
##
## $`8`
## scDblFinder.class
## sample singlet doublet
## CB129T01X__batch8 417 17
## CB129T04X__batch8 162 5
## CB130T04X__batch8 836 47
## CB151T01X__batch8 300 20
## CB157T04X__batch8 173 5
## CB189T01X__batch8 510 22
## CB189T04X__batch8 276 13
## CB196T01X__batch8 415 22
## CB196T04X__batch8 301 13
## CB233T01X__batch8 571 24
## CB266T01X__batch8 221 7
## CB291T01X__batch8 292 15
## CB327T01X__batch8 382 18
## CB343T01X__batch8 438 22
## CB343T03X__batch8 369 15
## NA__batch8 892 146
## P001T01X__batch8 370 13
## S030T02X__batch8 464 23
## S030T03X__batch8 330 20
##
## $`9`
## scDblFinder.class
## sample singlet doublet
## CB136T01X__batch9 281 8
## CB139T01X__batch9 560 30
## CB163T01X__batch9 378 14
## CB163T04X__batch9 388 14
## CB177T01X__batch9 488 25
## CB177T04X__batch9 458 15
## CB200T01X__batch9 286 9
## CB200T04X__batch9 410 13
## CB234T01X__batch9 116 3
## CB239T01X__batch9 341 14
## CB274T01X__batch9 317 14
## CB348T02X__batch9 149 4
## CB348T03X__batch9 109 7
## NA__batch9 541 67
## P001T01X__batch9 521 16
## S026T01X__batch9 108 4
## S026T02X__batch9 89 1
## S026T03X__batch9 119 6
## V003T01X__batch9 467 12
##
## $`12`
## scDblFinder.class
## sample singlet doublet
## CB141T01X__batch12 454 20
## CB141T04X__batch12 538 23
## CB155T01X__batch12 470 16
## CB155T04X__batch12 174 12
## CB194T01X__batch12 726 33
## CB194T04X__batch12 494 22
## CB204T01X__batch12 140 7
## CB309T01X__batch12 390 14
## CB320T01X__batch12 390 10
## CB351T01X__batch12 138 5
## DR056T01X__batch12 277 9
## DR056T03X__batch12 347 19
## NA__batch12 670 90
## P001T01X__batch12 404 14
## S005T01X__batch12 494 14
## S005T02X__batch12 565 23
## S012T01X__batch12 364 17
## S012T02X__batch12 491 13
## V004T01X__batch12 383 6
##
## $`5`
## scDblFinder.class
## sample singlet doublet
## DR003T01X__batch5 478 14
## DR024T01X__batch5 590 24
## DR026T01X__batch5 280 8
## DR029T01X__batch5 474 26
## DR029T07X__batch5 70 0
## DR051T01X__batch5 320 22
## DR057T01X__batch5 365 19
## DR057T07X__batch5 209 11
## DR066T01X__batch5 462 13
## DR066T07X__batch5 327 15
## DS042T01X__batch5 340 9
## DS087T01X__batch5 475 15
## DS092T01X__batch5 385 12
## NA__batch5 614 93
## P001T01X__batch5 388 11
## S007T02X__batch5 90 4
## S019T01X__batch5 439 9
##
## $`7`
## scDblFinder.class
## sample singlet doublet
## DR008T01X__batch7 495 22
## DR015T01X__batch7 640 40
## DR030T01X__batch7 237 13
## DR033T01X__batch7 318 19
## DR036T01X__batch7 591 28
## DR036T07X__batch7 580 36
## DR043T01X__batch7 271 8
## DR043T07X__batch7 574 26
## DR060T01X__batch7 444 26
## DR060T07X__batch7 422 34
## DR063T01X__batch7 193 5
## DR072T01X__batch7 94 8
## DR072T07X__batch7 359 12
## DS097T01X__batch7 320 14
## DS099T01X__batch7 489 15
## NA__batch7 1281 189
## P001T01X__batch7 459 18
## S017T01X__batch7 813 46
##
## $`6`
## scDblFinder.class
## sample singlet doublet
## DR009T01X__batch6 376 17
## DR009T03X__batch6 68 4
## DR011T01X__batch6 570 19
## DR011T05X__batch6 523 26
## DR031T01X__batch6 371 28
## DR032T01X__batch6 283 20
## DR038T01X__batch6 504 33
## DR039T01X__batch6 426 14
## DR039T07X__batch6 176 8
## DR044T01X__batch6 265 15
## DR044T07X__batch6 315 16
## DR055T01X__batch6 607 36
## DR064T01X__batch6 251 15
## DS082T01X__batch6 720 28
## DS094T01X__batch6 490 22
## DS098T01X__batch6 472 15
## NA__batch6 1041 196
## S013T01X__batch6 337 11
##
## $`4`
## scDblFinder.class
## sample singlet doublet
## DR012T01X__batch4 212 10
## DR013T01X__batch4 105 2
## DR014T01X__batch4 209 7
## DR016T01X__batch4 877 55
## DR028T01X__batch4 652 28
## DR033T07X__batch4 522 21
## DR052T01X__batch4 232 8
## DR052T07X__batch4 73 4
## DR054T01X__batch4 437 37
## DR061T01X__batch4 374 22
## DS001T01X__batch4 671 23
## NA__batch4 1252 162
## P001T01X__batch4 442 15
## S001T02X__batch4 169 11
## S001T03X__batch4 493 16
## V008T01X__batch4 547 27
## V009T01X__batch4 348 13
##
## $`3`
## scDblFinder.class
## sample singlet doublet
## NA__batch3 928 162
## P001T01X__batch3 591 13
## S003T02X__batch3 427 15
## S004T01X__batch3 404 16
## S004T03X__batch3 426 17
## S004T05X__batch3 678 23
## S006T01X__batch3 123 2
## S006T03X__batch3 402 18
## S006T05X__batch3 342 9
## S008T01X__batch3 419 12
## S008T03X__batch3 613 26
## S010T01X__batch3 766 31
## S011T01X__batch3 172 4
## S014T01X__batch3 167 4
## S022T01X__batch3 411 22
## S023T01X__batch3 373 12
## V005T01X__batch3 465 6
## V006T01X__batch3 608 15
## V007T01X__batch3 707 10
## [[1]]
##
## [[2]]
##
## [[3]]
##
## [[4]]
##
## [[5]]
##
## [[6]]
##
## [[7]]
##
## [[8]]
##
## [[9]]
##
## [[10]]
##
## [[11]]
##
## [[12]]